BLASTX 2.0.10 [Aug-26-1999]
Query= XF-10B10-GL34
(390 letters)
Database: nr
443,958 sequences; 136,619,797 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|5689293|dbj|BAA82917.1| (AB024414) UL22 product homolog [Gal... 33 0.96
gi|3885482|gb|AAC77916.1| (AF063589) hypothetical protein trans... 30 8.3
>gi|5689293|dbj|BAA82917.1| (AB024414) UL22 product homolog [Gallid
herpesvirus 1 (serotype 2)]
Length = 838
Score = 33.2 bits (74), Expect = 0.96
Identities = 15/43 (34%), Positives = 24/43 (54%)
Frame = -2
Query: 308 RTCSYCGCLLLTTK*SQHLSSLSVRTTKQEHTKLLNSGNGSLR 180
+ C YCGC+LL S H+ +++ +LL +GN S+R
Sbjct: 712 KECPYCGCVLLRYSASGHVRHAIYISSRDLQRELLAAGNSSVR 754
>gi|3885482|gb|AAC77916.1| (AF063589) hypothetical protein
transporter [Rhodococcus fascians]
Length = 714
Score = 30.1 bits (66), Expect = 8.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 130 YSLVAPYDPNSAIKVSALSDP 192
YS VAPYDPN + V+ S P
Sbjct: 340 YSFVAPYDPNEQLDVAPFSGP 360
Database: nr
Posted date: Jan 18, 2000 12:56 PM
Number of letters in database: 136,619,797
Number of sequences in database: 443,958
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85838929
Number of Sequences: 443958
Number of extensions: 1530789
Number of successful extensions: 3906
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3904
Number of HSP's gapped (non-prelim): 4
length of query: 130
length of database: 136,619,797
effective HSP length: 52
effective length of query: 77
effective length of database: 113,533,981
effective search space: 8742116537
effective search space used: 8742116537
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 65 (29.7 bits)