BLASTX 2.0.10 [Aug-26-1999]
Query= XF-09A12-GL17
(2832 letters)
Database: nr
443,958 sequences; 136,619,797 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|2507434|sp|P00956|SYI_ECOLI ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 1020 0.0
gi|1174518|sp|P43824|SYI_HAEIN ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 952 0.0
gi|1174519|sp|P18330|SYI_PSEFL ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 941 0.0
gi|2144550|pir||SYECIT isoleucine--tRNA ligase (EC 6.1.1.5) - E... 938 0.0
gi|3123287|sp|Q45477|SYI_BACSU ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 710 0.0
gi|6226709|sp|P46213|SYI_THEMA ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 707 0.0
gi|1174521|sp|P41972|SYI_STAAU ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 681 0.0
gi|6137708|pdb|1QU2|A Chain A, Insights Into Editing From An Il... 680 0.0
gi|4836216|gb|AAD30388.1|AF096862_2 (AF096862) isoleucyl-tRNA s... 679 0.0
gi|6226181|sp|O66651|SYI_AQUAE ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 673 0.0
gi|2501011|sp|P73505|SYI_SYNY3 ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 650 0.0
gi|5932379|gb|AAD56932.1|AF180145_24 (AF180145) isoleucyl-tRNA ... 647 0.0
gi|4009476 (AF068901) isoleucine-tRNA synthetase [Streptococcus... 622 e-177
gi|730869|sp|P41257|SYI_CAMJE ISOLEUCYL-TRNA SYNTHETASE (ISOLEU... 587 e-166
gi|3024677|sp|P56456|SYI_HELPY ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 574 e-162
gi|4155922 (AE001554) ISOLEUCYL-TRNA SYNTHETASE [Helicobacter p... 570 e-161
gi|2501010|sp|P75258|SYI_MYCPN ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 480 e-134
gi|1351159|sp|P47587|SYI_MYCGE ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 474 e-132
gi|5701963|emb|CAB52155.1| (AL109736) isoleucyl-trna synthetase... 456 e-127
gi|6325217|ref|NP_015285.1|ISM1| nuclear encoded mitochondrial ... 450 e-125
gi|625184 (L38957) mitochondrial isoleucyl-tRNA synthetase [Sac... 444 e-123
gi|3334357|sp|O27428|SYI_METTH ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 398 e-109
gi|135128|sp|P26499|SYI_METTM ISOLEUCYL-TRNA SYNTHETASE (ISOLEU... 398 e-109
gi|68525|pir||SYEXI isoleucine--tRNA ligase (EC 6.1.1.5) - Meth... 398 e-109
gi|3874441|emb|CAB02766.1| (Z81038) predicted using Genefinder;... 391 e-107
gi|3122898|sp|O29622|SYI_ARCFU ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 388 e-106
gi|598411 (L37104) transfer RNA-Ile synthetase [Thermotoga mari... 384 e-105
gi|2501012|sp|Q58357|SYI_METJA ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 384 e-105
gi|6647822|sp|O58792|SYI_PYRHO ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 382 e-105
gi|5458344|emb|CAB49833.1| (AJ248285) isoleucyl-tRNA synthetase... 380 e-104
gi|1174517|sp|P46207|SYI_AQUPY ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 372 e-102
gi|5104013|dbj|BAA79329.1| (AP000059) 1064aa long hypothetical ... 354 3e-96
gi|6015754|emb|CAB57581.1| (Y18930) isoleucyl-tRNA synthetase [... 319 7e-86
gi|6094403|sp|P56690|SYI_THETH ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 315 1e-84
gi|5689948|emb|CAB51985.1| (AL109663) putative isoleucyl-tRNA s... 290 4e-77
gi|4376371|gb|AAD18262| (AE001597) Isoleucyl-tRNA Synthetase [C... 289 1e-76
gi|3328409|gb|AAC67609.1| (AE001277) Isoleucyl-tRNA Synthetase ... 287 2e-76
gi|1174520|sp|P46214|SYI_PYRFU ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 282 1e-74
gi|4504555|ref|NP_002152.1|| isoleucine-tRNA synthetase >gi|440... 282 1e-74
gi|3122901|sp|O13651|SYIC_SCHPO ISOLEUCYL-TRNA SYNTHETASE, CYTO... 281 2e-74
gi|730870|sp|P41252|SYI_HUMAN ISOLEUCYL-TRNA SYNTHETASE, CYTOPL... 280 3e-74
gi|6094404|sp|O83466|SYI_TREPA ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 278 1e-73
gi|1711635|sp|Q10765|SYI_MYCTU ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 274 3e-72
gi|2688775 (AE001181) isoleucyl-tRNA synthetase (ileS) [Borreli... 272 1e-71
gi|2501014|sp|Q94425|SYI_CIOIN PROBABLE ISOLEUCYL-TRNA SYNTHETA... 269 9e-71
gi|6319395|ref|NP_009477.1|ILS1| cytoplasmic isoleucyl-tRNA syn... 269 9e-71
gi|2501013|sp|Q21926|SYI_CAEEL PROBABLE ISOLEUCYL-TRNA SYNTHETA... 266 5e-70
gi|4538961|emb|CAB39785.1| (AL049488) isoleucine-tRNA ligase-li... 266 6e-70
gi|1174516|sp|P41368|SYIP_STAAU ISOLEUCYL-TRNA SYNTHETASE, MUPI... 265 1e-69
gi|1174522|sp|P46215|SYI_SULAC ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 265 1e-69
gi|549028|sp|P36422|SYI_TETTH ISOLEUCYL-TRNA SYNTHETASE (ISOLEU... 264 2e-69
gi|3122906|sp|O26861|SYV_METTH VALYL-TRNA SYNTHETASE (VALINE--T... 263 7e-69
gi|171768 (M19992) isoleucyl-tRNA synthetase (EC 6.1.1.5) [Sacc... 258 2e-67
gi|3122909|sp|O28059|SYV_ARCFU VALYL-TRNA SYNTHETASE (VALINE--T... 256 7e-67
gi|6686011|sp|Q9X7E5|SYI_MYCLE ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 256 9e-67
gi|3256704|dbj|BAA29387.1| (AP000001) 896aa long hypothetical v... 251 2e-65
gi|5459071|emb|CAB50557.1| (AJ248288) valyl-tRNA synthetase (va... 249 1e-64
gi|2501068|sp|Q58413|SYV_METJA VALYL-TRNA SYNTHETASE (VALINE--T... 248 2e-64
gi|6459088|gb|AAF10907.1|AE001980_2 (AE001980) isoleucyl-tRNA s... 247 5e-64
gi|6226182|sp|Q9ZCU4|SYI_RICPR ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 244 2e-63
gi|4982399|gb|AAD36880.1|AE001819_3 (AE001819) valyl-tRNA synth... 231 2e-59
gi|586069|sp|Q05873|SYV_BACSU VALYL-TRNA SYNTHETASE (VALINE--TR... 229 7e-59
gi|549036|sp|P36420|SYV_LACCA VALYL-TRNA SYNTHETASE (VALINE--TR... 220 3e-56
gi|68538|pir||SYBSVS valine--tRNA ligase (EC 6.1.1.9) - Bacillu... 219 1e-55
gi|135181|sp|P11931|SYV_BACST VALYL-TRNA SYNTHETASE (VALINE--TR... 216 6e-55
gi|6094417|sp|O83998|SYV_TREPA VALYL-TRNA SYNTHETASE (VALINE--T... 215 2e-54
gi|2501015|sp|Q27707|SYI_NOSLO ISOLEUCYL-TRNA SYNTHETASE (ISOLE... 208 2e-52
gi|3986754 (AF109905) G7A [Mus musculus] 194 4e-48
gi|4590328|gb|AAD26531.1|AF087141_1 (AF087141) valyl-tRNA synth... 193 5e-48
gi|2829824|sp|P96142|SYV_THETH VALYL-TRNA SYNTHETASE (VALINE--T... 190 6e-47
gi|5454158|ref|NP_006286.1|| valyl-tRNA synthetase 2 >gi|452989... 189 1e-46
gi|6226199|sp|Q9ZCN6|SYV_RICPR VALYL-TRNA SYNTHETASE (VALINE--T... 188 2e-46
gi|1061310 (M98326) valyl-tRNA synthetase [Homo sapiens] 187 3e-46
gi|1351180|sp|P26640|SYV_HUMAN VALYL-TRNA SYNTHETASE (VALINE--T... 187 3e-46
gi|484950|pir||PN0474 valine--tRNA ligase (EC 6.1.1.9) (version... 185 2e-45
gi|2501067|sp|Q55522|SYV_SYNY3 VALYL-TRNA SYNTHETASE (VALINE--T... 182 1e-44
gi|6226198|sp|O53175|SYV_MYCTU VALYL-TRNA SYNTHETASE (VALINE--T... 182 1e-44
gi|6425518|emb|CAB60428.1| (AL110500) cDNA EST EMBL:D67292 come... 181 3e-44
gi|135184|sp|P28350|SYV_NEUCR VALYL-TRNA SYNTHETASE, MITOCHONDR... 180 5e-44
gi|151347 (M35366) transfer RNA-Ile synthetase [Pseudomonas flu... 173 5e-42
gi|94846|pir||A37152 isoleucine--tRNA ligase (EC 6.1.1.5) - Pse... 173 5e-42
gi|173164 (J02719) valyl-tRNA synthetase [Saccharomyces cerevis... 170 6e-41
gi|6321531|ref|NP_011608.1|VAS1| mitochondrial and cytoplasmic ... 170 6e-41
gi|88981|pir||S17675 valine--tRNA ligase (EC 6.1.1.9) - human >... 169 7e-41
gi|1351179|sp|P49696|SYV_FUGRU VALYL-TRNA SYNTHETASE (VALINE--T... 169 1e-40
gi|1255429 (U53155) strong similarity to the carboxyl two-third... 160 5e-38
gi|3738140|emb|CAA21241.1| (AL031852) valyl-trna synthetase, mi... 160 6e-38
gi|1518681 (U60901) isoleucyl-tRNA-synthetase [Bacillus subtilis] 155 1e-36
gi|5105495|dbj|BAA80808.1| (AP000062) 889aa long hypothetical v... 153 8e-36
gi|2501066|sp|P75304|SYV_MYCPN VALYL-TRNA SYNTHETASE (VALINE--T... 151 2e-35
gi|6457813|gb|AAF09735.1|AE001877_2 (AE001877) valyl-tRNA synth... 150 4e-35
gi|6226197|sp|O84304|SYV_CHLTR VALYL-TRNA SYNTHETASE (VALINE--T... 149 9e-35
gi|6226196|sp|Q9Z987|SYV_CHLPN VALYL-TRNA SYNTHETASE (VALINE--T... 148 2e-34
gi|4155674 (AE001535) VALYL-TRNA SYNTHETASE [Helicobacter pylor... 148 3e-34
gi|1174549|sp|P43834|SYV_HAEIN VALYL-TRNA SYNTHETASE (VALINE--T... 147 4e-34
gi|3122914|sp|P93736|SYV_ARATH VALYL-TRNA SYNTHETASE (VALINE--T... 143 7e-33
gi|417844|sp|Q04462|SYV_RAT VALYL-TRNA SYNTHETASE (VALINE--TRNA... 143 7e-33
gi|2501065|sp|P56000|SYV_HELPY VALYL-TRNA SYNTHETASE (VALINE--T... 141 4e-32
gi|3915080|sp|O51680|SYV_BORBU VALYL-TRNA SYNTHETASE (VALINE--T... 137 4e-31
gi|1351181|sp|P47576|SYV_MYCGE VALYL-TRNA SYNTHETASE (VALINE--T... 130 7e-29
gi|147906 (J03497) valyl tRNA synthetase [Escherichia coli] 125 2e-27
gi|4490646|emb|CAB38577.1| (Z98762) putative valyl trna synthet... 125 2e-27
gi|537100 (U14003) valyl-tRNA synthetase [Escherichia coli] 123 7e-27
gi|68537|pir||SYECVT valine--tRNA ligase (EC 6.1.1.9) - Escheri... 123 7e-27
gi|2507438|sp|P07118|SYV_ECOLI VALYL-TRNA SYNTHETASE (VALINE--T... 123 7e-27
gi|6226195|sp|O67411|SYV_AQUAE VALYL-TRNA SYNTHETASE (VALINE--T... 120 8e-26
gi|3219290|dbj|BAA28839| (AB008525) Valyl tRNA Synthetase [Giar... 117 5e-25
gi|530479|emb|CAA83826| (Z33289) Ile-tRNA synthetase [Mycoplasm... 106 7e-22
gi|147763 (M10428) isoleucyl-tRNA synthetase [Escherichia coli] 106 7e-22
gi|4432760|dbj|BAA28842| (AB008528) Valyl tRNA Synthetase [Tric... 106 1e-21
gi|3122908|sp|O27552|SYL_METTH LEUCYL-TRNA SYNTHETASE (LEUCINE-... 86 1e-15
gi|6015883|emb|CAB57710.1| (Y18930) isoleucyl-trna synthetase [... 84 6e-15
gi|757839|emb|CAA25352| (X00776) isoleucyl-tRNA-synthetase (1 i... 80 7e-14
gi|146669 (K01990) isoleucyl-tRNA synthetase (ileS) [Escherichi... 80 7e-14
gi|6630988|gb|AAF19639.1|AF201388_1 (AF201388) isoleucyl-tRNA s... 80 9e-14
gi|530444|emb|CAA83769| (Z33122) Val-tRNA synthetase [Mycoplasm... 79 2e-13
gi|1174550|sp|P46216|SYV_TRIVA VALYL-TRNA SYNTHETASE (VALINE--T... 76 1e-12
gi|3219292|dbj|BAA28840| (AB008526) Valyl tRNA Synthetase [Tric... 76 1e-12
gi|3219294|dbj|BAA28841| (AB008527) Valyl tRNA Synthetase [Tric... 76 1e-12
gi|1373154 (U48870) IleS [Bacillus subtilis] 72 3e-11
gi|68521|pir||SYECL leucine--tRNA ligase (EC 6.1.1.4) - Escheri... 68 3e-10
gi|6226188|sp|Q9ZDB1|SYL_RICPR LEUCYL-TRNA SYNTHETASE (LEUCINE-... 68 5e-10
gi|406914 (U02254) unknown [Mycoplasma genitalium] 66 1e-09
gi|2129086|pir||A64379 isoleucine--tRNA ligase (EC 6.1.1.5) - M... 66 1e-09
gi|2507435|sp|P07813|SYL_ECOLI LEUCYL-TRNA SYNTHETASE (LEUCINE-... 66 2e-09
gi|3915868|sp|Q58050|SYL_METJA LEUCYL-TRNA SYNTHETASE (LEUCINE-... 66 2e-09
gi|1778560 (U82598) leucine tRNA synthetase [Escherichia coli] 65 3e-09
gi|1174531|sp|P43827|SYL_HAEIN LEUCYL-TRNA SYNTHETASE (LEUCINE-... 65 3e-09
gi|135127|sp|P13502|SYI_ENTAE ISOLEUCYL-TRNA SYNTHETASE (ISOLEU... 65 3e-09
gi|1149664|emb|CAA60232| (X86515) ileS [Clostridium perfringens] 64 6e-09
gi|4980663|gb|AAD35261.1|AE001702_1 (AE001702) leucyl-tRNA synt... 64 8e-09
gi|6226187|sp|O66680|SYL_AQUAE LEUCYL-TRNA SYNTHETASE (LEUCINE-... 63 1e-08
gi|5104685|dbj|BAA80000.1| (AP000060) 959aa long hypothetical l... 63 1e-08
gi|282430|pir||A41882 leucine--tRNA ligase (EC 6.1.1.4) - Bacil... 62 2e-08
gi|3123286|sp|P36430|SYL_BACSU LEUCYL-TRNA SYNTHETASE (LEUCINE-... 62 2e-08
gi|1931613|gb|AAB51589.1| (U93308) valyl tRNA synthetase [Arabi... 62 2e-08
gi|3328616|gb|AAC67801.1| (AE001294) Leucyl tRNA Synthetase [Ch... 62 3e-08
gi|4982478|gb|AAD36946.1|AF069441_6 (AF069441) putative leucyl ... 61 4e-08
gi|3024678|sp|P56457|SYL_HELPY LEUCYL-TRNA SYNTHETASE (LEUCINE-... 61 5e-08
gi|4156066 (AE001567) LEUCYL-TRNA SYNTHETASE [Helicobacter pylo... 61 7e-08
gi|3122899|sp|O30250|SYL_ARCFU LEUCYL-TRNA SYNTHETASE (LEUCINE-... 60 9e-08
gi|5458296|emb|CAB49785.1| (AJ248285) leucyl-tRNA synthetase (l... 60 1e-07
gi|3257379|dbj|BAA30062| (AP000004) 967aa long hypothetical leu... 58 4e-07
gi|5051889|gb|AAD38353.1| (AF110955) valyl tRNA synthetase [Cry... 56 1e-06
gi|2507608|sp|P47508|SYL_MYCGE LEUCYL-TRNA SYNTHETASE (LEUCINE-... 55 3e-06
gi|6459971|gb|AAF11720.1|AE002050_6 (AE002050) leucyl-tRNA synt... 55 3e-06
gi|6322209|ref|NP_012284.1|MUC1| cell surface flocculin with st... 54 5e-06
gi|2501028|sp|P73274|SYL_SYNY3 LEUCYL-TRNA SYNTHETASE (LEUCINE-... 53 1e-05
gi|6094405|sp|O83595|SYL_TREPA LEUCYL-TRNA SYNTHETASE (LEUCINE-... 53 1e-05
gi|2842556|dbj|BAA24690| (AB010832) ORF3; putative leucyl-tRNA ... 52 2e-05
gi|2688147 (AE001135) leucyl-tRNA synthetase (leuS) [Borrelia b... 52 3e-05
gi|3219299|dbj|BAA28844| (AB008530) Valyl tRNA Synthetase [Tric... 52 3e-05
gi|6094407|sp|O33925|SYM_THEMA METHIONYL-TRNA SYNTHETASE (METHI... 50 7e-05
gi|2983551 (AE000721) cysteinyl-tRNA synthetase [Aquifex aeolicus] 50 1e-04
gi|549024|sp|Q06752|SYC_BACSU CYSTEINYL-TRNA SYNTHETASE (CYSTEI... 50 1e-04
gi|3219297|dbj|BAA28843| (AB008529) Valyl tRNA Synthetase [Tric... 49 2e-04
gi|2983692 (AE000731) methionyl-tRNA synthetase alpha subunit [... 49 2e-04
gi|1314302 (U41072) isoleucyl-tRNA synthetase [Staphylococcus a... 49 2e-04
gi|2501033|sp|Q55729|SYM_SYNY3 METHIONYL-TRNA SYNTHETASE (METHI... 48 3e-04
gi|5105279|dbj|BAA80592.1| (AP000062) 475aa long hypothetical c... 48 3e-04
gi|1085432|pir||S55315 mucin (clone PGM-2A) - pig >gi|2136504|p... 48 3e-04
gi|6459435|gb|AAF11225.1|AE002009_5 (AE002009) cysteinyl-tRNA s... 48 5e-04
gi|5420387|emb|CAB46679.1| (AJ243459) proteophosphoglycan [Leis... 47 6e-04
gi|1351163|sp|Q09828|SYLM_SCHPO PUTATIVE LEUCYL-TRNA SYNTHETASE... 46 0.001
gi|6226710|sp|Q09996|SYLC_CAEEL PROBABLE LEUCYL-TRNA SYNTHETASE... 46 0.002
gi|1074944|pir||A64105 isoleucine--tRNA ligase (EC 6.1.1.5) - H... 45 0.004
gi|2388584 (AC000098) EST gb|ATTS1136 comes from this gene. [Ar... 44 0.007
gi|406454 (U02196) Homology to isoleucyl-tRNA synthetase M30942... 43 0.013
gi|188864 (M74027) mucin [Homo sapiens] 43 0.013
gi|5420389|emb|CAB46680.1| (AJ243460) proteophosphoglycan [Leis... 43 0.017
gi|2135765|pir||A43932 mucin 2 precursor, intestinal - human (f... 42 0.022
gi|4505285|ref|NP_002448.1|| mucin 2, intestinal/tracheal >gi|2... 42 0.022
gi|1255319 (U51998) C12D12.1 gene product [Caenorhabditis elegans] 42 0.022
gi|186396 (M94131) mucin [Homo sapiens] 42 0.022
gi|6093225|emb|CAB59177.1| (AL122037) hypothetical protein [Hom... 42 0.028
gi|451544 (U04267) proline-rich cell wall protein [Gossypium ba... 41 0.064
gi|477072|pir||A48018 mucin 7 precursor, salivary - human 41 0.064
gi|2501027|sp|P71698|SYL_MYCTU LEUCYL-TRNA SYNTHETASE (LEUCINE-... 41 0.064
gi|100753|pir||S13383 hydroxyproline-rich glycoprotein - sorghu... 38 0.32
gi|119713|sp|P24152|EXTN_SORBI EXTENSIN PRECURSOR (PROLINE-RICH... 38 0.32
gi|1085433|pir||S55316 mucin (clone PGM-2B) - pig >gi|915207 (U... 38 0.42
gi|2160156 (AC000132) Strong similarity to S. pombe leucyl-tRNA... 37 0.72
gi|551946 (M35367) transfer RNA-Ile synthetase [Pseudomonas flu... 37 0.95
gi|3874800|emb|CAB03944.1| (Z81479) similar to Kunitz/Bovine pa... 36 1.2
gi|3914099|sp|Q05544|N551_SOYBN EARLY NODULIN 55-1 PRECURSOR (N... 36 1.6
gi|134466|sp|P13730|SGS3_DROER SALIVARY GLUE PROTEIN SGS-3 PREC... 36 1.6
gi|123406|sp|P22810|HMOC_DROME HOMEOTIC PROTEIN ORTHODENTICLE (... 36 1.6
gi|1942972|pdb|1KXF| Sindbis Virus Capsid, (Wild-Type) Residue... 36 1.6
gi|2088658|gb|AAB95292.1| (AF002109) En/Spm-like transposon pro... 36 1.6
gi|3858883 (U67056) myosin I heavy chain kinase [Acanthamoeba c... 36 1.6
gi|3132538|gb|AAC16287.1| (AF061207) polyprotein [Sindbis virus] 36 1.6
gi|130578|sp|P27285|POLS_SINDO STRUCTURAL POLYPROTEIN (P130) [C... 36 1.6
gi|1125068 (U38304) structural polyprotein [Sindbis-like virus] 36 1.6
gi|1125071 (U38305) structural polyprotein [Sindbis-like virus] 36 1.6
gi|4099086 (U82999) KEXIN [Pneumocystis carinii] 36 2.1
gi|223384|prf||0801290B protein,core [Sindbis virus] >gi|223671... 36 2.1
gi|6460434|gb|AAF12144.1|AE002089_7 (AE002089) hypothetical pro... 36 2.1
gi|73648|pir||EDBEIF immediate-early protein IE180 - suid herpe... 36 2.1
gi|3132534|gb|AAC16285.1| (AF061205) polyprotein [Sindbis virus... 36 2.1
gi|3912991|sp|O42814|AGUA_ASPTU ALPHA-GLUCURONIDASE PRECURSOR (... 36 2.1
gi|130579|sp|P03316|POLS_SINDV STRUCTURAL POLYPROTEIN (P130) [C... 36 2.1
gi|74512|pir||VHWVB2 structural polyprotein - Sindbis virus (st... 36 2.1
gi|1916844 (U82987) Bcl-2 binding component 3 [Homo sapiens] 35 2.8
gi|135574|sp|P03186|TEGU_EBV LARGE TEGUMENT PROTEIN >gi|73929|p... 35 3.7
gi|2114321|dbj|BAA20037| (D88733) membrane glycoprotein [Equine... 35 3.7
gi|6650709|gb|AAF21979.1|AF115363_1 (AF115363) no optic lobe pr... 35 3.7
gi|6322611|ref|NP_012685.1|YJR151C| Yjr151cp >gi|1352944|sp|P47... 34 4.8
gi|6093725|sp|Q11053|PKNH_MYCTU PROBABLE SERINE/THREONINE-PROTE... 34 4.8
gi|2114323|dbj|BAA20038| (D88734) membrane glycoprotein [Equine... 34 4.8
gi|172526 (M16165) S1 protein [Saccharomyces cerevisiae] 34 4.8
gi|1492039 (U60315) MC096L [Molluscum contagiosum virus subtype 1] 34 4.8
gi|5305335|gb|AAD41594.1|AF071081_1 (AF071081) proline-rich muc... 34 4.8
gi|3093388|emb|CAA06670.1| (AJ005685) thr4 [Tenebrio molitor] 34 6.3
gi|1507721 (L81125) monooxygenase subunit [Pseudomonas sp.] 34 6.3
gi|3327152|dbj|BAA31644| (AB014569) KIAA0669 protein [Homo sapi... 34 6.3
gi|3834293 (U80846) No definition line found [Caenorhabditis el... 34 6.3
gi|81240|pir||JQ0964 hydroxyproline-rich glycoprotein precursor... 34 6.3
gi|255402|bbs|113222 (S44199) class IV zygote specific cell wal... 34 6.3
gi|5032119|ref|NP_005830.1|| Ser/Arg-related nuclear matrix pro... 34 6.3
gi|3834294 (U80846) No definition line found [Caenorhabditis el... 34 6.3
gi|3041723|sp|P39770|SALM_DROME HOMEOTIC PROTEIN SPALT-MAJOR >g... 34 8.2
gi|3044086 (AF055904) unknown [Myxococcus xanthus] 34 8.2
>gi|2507434|sp|P00956|SYI_ECOLI ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|2367096 (AE000113)
isoleucine tRNA synthetase [Escherichia coli]
Length = 938
Score = 1020 bits (2609), Expect = 0.0
Identities = 502/937 (53%), Positives = 624/937 (66%), Gaps = 13/937 (1%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
DYK+TL+LP T FPMRGDL KREP +L RW DD Y +RA KG+ F+LHDGPPYANG
Sbjct: 3 DYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANG 62
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQF 369
IH+GH+VNKILKDII+KSK L G+D+PY+PGWDCHGLPIE+ +E++YGK G A +F
Sbjct: 63 SIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEF 122
Query: 370 RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGT 549
R KCREYAA Q+ QR+DF RLG++GDW PY T+DF+ EA+ IRAL KI+ GHL +G
Sbjct: 123 RAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGA 182
Query: 550 KPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWT 729
KPVHWC DC SALAEAE+EY DKTSP +DVA+ A+D AL A F A + +++ IWT
Sbjct: 183 KPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKF-AVSNVNGPISLVIWT 241
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWTLPA+ AIS+ P DY LV+ GQ R G+ + I G+
Sbjct: 242 TTPWTLPANRAISIAPDFDYALVQ---IDGQA--VILAKDLVESVMQRIGVTDYTILGTV 296
Query: 910 KGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
KGA +E HPF +P +LG+HV+ + GTGAVHTAPGHG +D+ + Q+YGL
Sbjct: 297 KGAELELLRFTHPFM-GFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGL---- 351
Query: 1090 SAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH 1269
NPV G YLP T P TL G++++KAN ++V +M HSYP
Sbjct: 352 --ETANPVGPDGTYLPGTYP----TLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPC 405
Query: 1270 CWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTIS 1449
CWRHKTPI+FRATPQWF+SM+Q LR+ +LK I V W P WGQARI SM+ NRPDW IS
Sbjct: 406 CWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCIS 465
Query: 1450 RQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYE 1629
RQRTWGVP+ LFVH+ + HPR+ LM +VA RVE G+ W+ LD E+LG EADQY
Sbjct: 466 RQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYV 525
Query: 1630 KITDILDVWFDSGITHEAVLLERG--LPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAP 1803
K+ D LDVWFDSG TH +V+ R AD+YLEG+DQHRGWF SSL+ AM AP
Sbjct: 526 KVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAP 585
Query: 1804 YKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEIL 1983
Y+Q LTHGFTVD GRKMSKS+GN + PQD++ LGADILRLW+ASTDY+ EM++S EIL
Sbjct: 586 YRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEIL 645
Query: 1984 KRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTR 2163
KR D+YRRIRNTARFLL NL+GFDP +V +M+ LDRW V A Q+ I AY
Sbjct: 646 KRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEA 705
Query: 2164 YDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAP 2343
YDF E+VQ ++ FCSV++GS YLD+ KDR YT + D+ RRS QTA+YH+ A VRW+AP
Sbjct: 706 YDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAP 765
Query: 2344 ILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLTLRDHVTKVLEP 2523
ILSFTADE+W YLPG+ V WY+G +D+LL +R V KV+E
Sbjct: 766 ILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQ 825
Query: 2524 MRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTVTPAN----------- 2670
RA+ +G + L +ELRF+ ++ TV N
Sbjct: 826 ARADKKVGGSLEAAVTLYAEPELSAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEV 885
Query: 2671 TDGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRCVTNVDGPGEQR 2820
G V+ KC RCWHY D+G H E+CGRCV+NV G GE+R
Sbjct: 886 LKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKR 935
>gi|1174518|sp|P43824|SYI_HAEIN ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
Length = 941
Score = 952 bits (2433), Expect = 0.0
Identities = 478/939 (50%), Positives = 605/939 (63%), Gaps = 15/939 (1%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
DYK TL+LP T FPMRGDL KREP + W + Y ++R +KG+ F+LHDGPPYANG
Sbjct: 4 DYKNTLNLPETSFPMRGDLAKREPDKXKNWYEKNLYQKIRKASKGKKSFILHDGPPYANG 63
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQF 369
IH+GHAVNKILKDIIIKSK GFD+PYIPGWDCHGLPIE+ +E GK + A +F
Sbjct: 64 NIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKVEGLVGKPNEKISAAEF 123
Query: 370 RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGT 549
RQKCREYAAEQ++ Q++DF RLG++GDWD PY T++F EA+ IR L K+++ GHL +G+
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183
Query: 550 KPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWT 729
KPVHWC DCGS+LAEAE+EY DK SP + V +PA + A F+A +L+ IWT
Sbjct: 184 KPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFPAESADEIEAKFSAQGRGQGKLSAIIWT 243
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWT+P++ AI+V L+Y LV+ G R GI + I GS
Sbjct: 244 TTPWTMPSNRAIAVNADLEYNLVQ----LGDER-VILAAELVESVAKAVGIEHIEILGSV 298
Query: 910 KGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
KG +E HPFY D T+P++LG+HV+ + GTG VHTAP HG +D V +QY L
Sbjct: 299 KGDDLELSRFHHPFY-DFTVPVILGDHVTTDGGTGLVHTAPDHGLDDFIVGKQYDL---- 353
Query: 1090 SAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH 1269
V G ++ TT F AG +++ANPL+++ ++ HSYPH
Sbjct: 354 --PMAGLVSNDGKFISTTEFF-----AGKGVFEANPLVIEKLQEVGNLLKVEKIKHSYPH 406
Query: 1270 CWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTIS 1449
CWRHKTPI+FRATPQWFI ME LR AL I V W P WGQARI M+ENRPDW IS
Sbjct: 407 CWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIPDWGQARIEKMVENRPDWCIS 466
Query: 1450 RQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYE 1629
RQRTWGVP+ LFVH+ + HPR+ L+ +VA RVE+ G+ W+ LD+ ELLG +A+ Y
Sbjct: 467 RQRTWGVPMTLFVHKETEELHPRTLDLLEEVAKRVERAGIQAWWDLDEKELLGADAETYR 526
Query: 1630 KITDILDVWFDSGITHEAVLLER--GLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAP 1803
K+ D LDVWFDSG T+ +V+ R + D+YLEG+DQHRGWF SSL+ A D+ AP
Sbjct: 527 KVPDTLDVWFDSGSTYSSVVANRLEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDSKAP 586
Query: 1804 YKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEIL 1983
YKQ LTHGFTVD GRKMSKS+GN + PQ+++ G DILRLW+ASTDY+ EM++S EIL
Sbjct: 587 YKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEIL 646
Query: 1984 KRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTR 2163
KR D+YRRIRNTARFLL NL+GFDP LV MI+LDRW V A + Q IK AY
Sbjct: 647 KRAADSYRRIRNTARFLLANLNGFDPKRDLVKPEKMISLDRWAVACALDAQNEIKDAYDN 706
Query: 2164 YDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAP 2343
Y F +VQ ++ FCSV++GS YLD+ KDR YT + D+ RRS QTA++H+ A VRW+AP
Sbjct: 707 YQFHTVVQRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAP 766
Query: 2344 ILSFTADELWSYLP---GDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLTLRDHVTKV 2514
ILSFTADE+W +LP A+ V +Y G + +L+ +R V +V
Sbjct: 767 ILSFTADEIWQHLPQTESARAEFVFTEEFYQGLFGLGEDEKLDDAYWQQLIKVRSEVNRV 826
Query: 2515 LEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTV----------TP 2664
LE R N IG L ELRF+ I+ V V
Sbjct: 827 LEISRNNKEIGGGLEAEVTVYANDEYRALLAQLGNELRFVLITSKVDVKSLSEKPADLAD 886
Query: 2665 ANTDGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRCVTNVDGPGEQRHW 2826
+ +G VS + KC RCWHY +IG P HP LC RCV NV G GE R++
Sbjct: 887 SELEGIAVSVTRSNAEKCPRCWHYSDEIGVSPEHPTLCARCVENVVGNGEVRYF 940
>gi|1174519|sp|P18330|SYI_PSEFL ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|577085|emb|CAA56431| (X80132) isoleucine-tRNA ligase
[Pseudomonas fluorescens]
Length = 943
Score = 941 bits (2405), Expect = 0.0
Identities = 477/939 (50%), Positives = 612/939 (64%), Gaps = 21/939 (2%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
DYK TL+LP T FPM+ LP+REP IL+RW Y +LR K RP F+LHDGPPYANG
Sbjct: 3 DYKATLNLPDTAFPMKAGLPQREPQILQRWNSIGLYGKLREIGKDRPKFVLHDGPPYANG 62
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQF 369
IH+GHA+NKILKD+I++SK L GFDAPY+PGWDCHGLPIE +E YGK L A +
Sbjct: 63 TIHIGHALNKILKDMILRSKTLSGFDAPYVPGWDCHGLPIEHKVEVTYGK---NLGADKT 119
Query: 370 RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGT 549
R+ CR YA EQI+ Q+ +F RLG++G+WD PYKT++F+ EA EIRALA+IV G + +G
Sbjct: 120 RELCRAYATEQIEGQKSEFIRLGVLGEWDNPYKTMNFKNEAGEIRALAEIVKGGFVFKGL 179
Query: 550 KPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFN-ATLPPDVQLAVPIW 726
KPV+WCFDCGSALAEAE+EY DK S +DVA+P D + LA F A+L A+ IW
Sbjct: 180 KPVNWCFDCGSALAEAEVEYEDKKSSTIDVAFPIADDAKLAEAFGLASLAKPA--AIVIW 237
Query: 727 TTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGS 906
TTTPWT+PA+ A++V P Y LV+ R RY + +I +
Sbjct: 238 TTTPWTIPANQALNVHPEFTYALVDVGD-----RLLVLAEEMVESCLARYELQGSVI-AT 291
Query: 907 AKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNH 1086
A G+A+E HPFY DR P+ L ++V GTG VH +P +G +D + ++YG++N
Sbjct: 292 ATGSALELINFRHPFY-DRLSPVYLADYVELGSGTGIVHCSPAYGVDDFVICKKYGMVND 350
Query: 1087 YSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYP 1266
+NPV + GVY+P+ F G I+KA+ I++ + HSY
Sbjct: 351 DI---INPVQSNGVYVPSLEFFG-----GQFIFKADQPIIEKLREVGALMQTAAIQHSYM 402
Query: 1267 HCWRHKTPIVFRATPQWFISMEQA-----ALRSAALKAITHVTWYPQWGQARILSMIENR 1431
HCWRHKTP+++RAT QWFI M++ LR +LKAI + P WGQAR+ SMI NR
Sbjct: 403 HCWRHKTPLIYRATAQWFIGMDKEPTSGDTLRVRSLKAIEDTKFVPSWGQARLHSMIANR 462
Query: 1432 PDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGT 1611
PDW ISRQR WGVPIP F+++ SG HPR+ LM VA RVEQQG++ W+ LD ELLG
Sbjct: 463 PDWCISRQRNWGVPIPFFLNKESGELHPRTVELMEVVAQRVEQQGIEAWFKLDAAELLGD 522
Query: 1612 EADQYEKITDILDVWFDSGITHEAVL-----LERGLPKPADLYLEGADQHRGWFQSSLLT 1776
EA Y+KI+D LDVWFDSG TH VL + ADLYLEG+DQHRGWF SSLLT
Sbjct: 523 EAPLYDKISDTLDVWFDSGTTHWHVLRGSHPMGHETGPRADLYLEGSDQHRGWFHSSLLT 582
Query: 1777 GVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSN 1956
G A+DN APY++ LTHGFTVD+ GRKMSKSL N IEP+ I TLGADI+RLW+ASTDYS
Sbjct: 583 GCAIDNHAPYRELLTHGFTVDETGRKMSKSLKNVIEPKKINDTLGADIMRLWVASTDYSG 642
Query: 1957 EMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQ 2136
E+++S +IL R+ DAYRRIRNTARF+L NL GF+P L+P DM+ALDRW V R LQ
Sbjct: 643 EIAVSDQILARSADAYRRIRNTARFMLSNLTGFNPASDLLPAEDMLALDRWAVDRTLLLQ 702
Query: 2137 QTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLT 2316
+ ++ Y Y F + I NFC +LG YLD+ KDR YT ++ RRSAQTA+YH++
Sbjct: 703 RELQEHYGEYRFWNVYSKIHNFCVQELGGFYLDIIKDRQYTTGANSKARRSAQTALYHIS 762
Query: 2317 AAFVRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLTLR 2496
A VRWIAPIL+FTADELW YLPG+ ++V+ TWY+G ++ ++ ++
Sbjct: 763 EALVRWIAPILAFTADELWEYLPGERNESVMLNTWYEGLTELPADFELGREYWEGVMAVK 822
Query: 2497 DHVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTVTP---- 2664
V K LE RA +G L+ ELRF+ I+ ++ P
Sbjct: 823 VAVNKELEVQRAAKAVGGNLQAEVTLFAEDGLTADLAKLSNELRFVLITSTASLAPFTQA 882
Query: 2665 ------ANTDGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRCVTNVDGPGEQRHW 2826
G + + KCARCWH R D+G +P HPE+CGRCV N+ G GE RH+
Sbjct: 883 PADAVATEVPGLKLKVVKSAFPKCARCWHCREDVGVNPEHPEICGRCVDNISGEGEVRHY 942
>gi|2144550|pir||SYECIT isoleucine--tRNA ligase (EC 6.1.1.5) -
Escherichia coli >gi|216453|dbj|BAA01304| (D10483)
isoleucyl-tRNA ligase [Escherichia coli]
Length = 936
Score = 938 bits (2397), Expect = 0.0
Identities = 476/937 (50%), Positives = 601/937 (63%), Gaps = 19/937 (2%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
DYK+TL+LP T FPMRGDL KREP +L RW DD Y +RA KG+ F+LHDGPPYANG
Sbjct: 3 DYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANG 62
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQF 369
IH+GH+VNKILKDII+KSK L G+D+PY+PGWDCHGLPIE+ +E++YGK G A +F
Sbjct: 63 SIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEF 122
Query: 370 RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFR-FEADEIRALAKIVDKGHLIRG 546
R KCREYAA Q+ QR+DF RLG++GDW PY T+ + ++A+ IRAL KI+ GHL +G
Sbjct: 123 RAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMGLQNWKANIIRALGKIIGNGHLHKG 182
Query: 547 TKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIW 726
KPVHWC DC SALA+ ++ T K + A+D AL A F A + +++ IW
Sbjct: 183 AKPVHWCVDCRSALAKRKLSITTKLLRPSTLLSRAVDQDALKAKF-AVSNVNGPISLVIW 241
Query: 727 TTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGS 906
TTTPWTLPA+ AIS+ P DY LV+ GQ R G+ + HG
Sbjct: 242 TTTPWTLPANRAISIAPDFDYALVQ---IDGQA--VILAKDLVESVMQRIGVTDSR-HGK 295
Query: 907 AKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNH 1086
GA HPF +P +LG+HV+ + GTGAVHTAPGHG +D+ + Q+YGL
Sbjct: 296 RCGAGAA--AFTHPFM-GFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGL--- 349
Query: 1087 YSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYP 1266
NPV G YLP T P TL G++++KAN ++ +M HSYP
Sbjct: 350 ---ETANPVGPDGTYLPGTYP----TLDGVNVFKANDIVAALLQEKGALLHVEKMQHSYP 402
Query: 1267 HCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTI 1446
CWRHKTPI+FRATPQWF+SM+Q LR+ +LK I V W P WGQARI SM+ NRPDW I
Sbjct: 403 CCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCI 462
Query: 1447 SRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQY 1626
SRQRTWGVP+ LFVH+ + HPR+ LM +VA RVE G+ W+ LD E+LG EADQY
Sbjct: 463 SRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQY 522
Query: 1627 EKITDILDVWFDSGITHEAVLLERG--LPKPADLYLEGADQHRGWFQSSLLTGVAMDNAA 1800
K+ D LDVWFDSG TH +V+ R AD+YLEG+DQHRGWF SSL+ AM A
Sbjct: 523 VKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKA 582
Query: 1801 PYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEI 1980
PY+Q LTHGFTVD GRKMSKS+GN + PQD++ LGADILRLW+ASTDY+ EM++S EI
Sbjct: 583 PYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEI 642
Query: 1981 LKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIV-----HRAFELQQTI 2145
LKR D YRRIRNTARFLL NL+GFDP +V +M+ LDRW V HR ++T
Sbjct: 643 LKRAADTYRRIRNTARFLLANLNGFDPAKDMVKRREMVVLDRWAVVVRKRHRKTSSRRTK 702
Query: 2146 KAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAF 2325
T++ + ++ FCSV++GS YLD+ KDR Y + + RRS QTA+YH+ A
Sbjct: 703 HTISTKW-----YKRLMRFCSVEMGSFYLDIIKDRQYYAKGHSVARRSCQTALYHIAEAL 757
Query: 2326 VRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLTLRDHV 2505
VRW+APILSFTADE+W YLPG+ V WY+G +D+LL +R V
Sbjct: 758 VRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEV 817
Query: 2506 TKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTVTPAN----- 2670
KV+E RA+ +G + L +ELRF+ ++ TV N
Sbjct: 818 NKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALGDELRFVLLTSGATVADYNDAPAD 877
Query: 2671 ------TDGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRCVTNVDGPGEQR 2820
G V+ KC RCWHY D+G H E+CGRCV+NV G GE+R
Sbjct: 878 AQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKR 933
>gi|3123287|sp|Q45477|SYI_BACSU ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|2633916|emb|CAB13417| (Z99112) isoleucyl-tRNA
synthetase [Bacillus subtilis]
Length = 921
Score = 710 bits (1812), Expect = 0.0
Identities = 390/922 (42%), Positives = 528/922 (56%), Gaps = 16/922 (1%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
D+K TL +P TDFPMRG+LP REP I ++WE +D Y ++ K RP F+LHDGPPYANG
Sbjct: 2 DFKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANG 61
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQF 369
IH+GHA+NKILKD I++ K + G++APY+PGWD HGLPIE A+ K + +F
Sbjct: 62 DIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVNRKEMSVAEF 121
Query: 370 RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGT 549
R+ C EYA +QI+ QR FKRLG+ GDW+ PY TL +EA +IR ++ +G++ +G
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181
Query: 550 KPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWT 729
KPV+W SALAEAEIEY DK S + VA+ D + + + IWT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKRSASIYVAFGVKDGKGVL---------ENGERIIIWT 232
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWT+PA+L ISV P L+Y ++ G+ R+ G + + +
Sbjct: 233 TTPWTIPANLGISVHPDLEYSVIA----VGEDRFVVASALVENVASA-CGFDQYEVTRTV 287
Query: 910 KGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
KG +E I HP Y R ++LG HV+ + GTG VHTAPGHG++D + Q+YGL
Sbjct: 288 KGKDLENIIAEHPLY-GRDSLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGL---- 342
Query: 1090 SAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH 1269
L PVD +GV P F G+ AN I + HSYPH
Sbjct: 343 --DVLCPVDEKGVMTSEAPGFE-----GMFYDDANKAITQQLDEKGALVKLEFITHSYPH 395
Query: 1270 CWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTIS 1449
WR K P +FRAT QWF S++ RS L AI W P+WG+ R+ +M+ +R DW IS
Sbjct: 396 DWRTKKPTIFRATAQWFASIKD--FRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDWCIS 453
Query: 1450 RQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELL-------G 1608
RQR WGVPIP+F + +G P + V++ Q G +IW+ + +LL G
Sbjct: 454 RQRAWGVPIPVF-YAENGEPVITDETI-EHVSELFRQHGSNIWFEKEAKDLLPEGFTHPG 511
Query: 1609 TEADQYEKITDILDVWFDSGITHEAVLLER-GLPKPADLYLEGADQHRGWFQSSLLTGVA 1785
+ + K DI+DVWFDSG +H+AVL ER L +PADLYLEG+DQ+RGWF SSL T VA
Sbjct: 512 SPNGTFTKEQDIMDVWFDSGSSHQAVLEERDDLVRPADLYLEGSDQYRGWFNSSLSTAVA 571
Query: 1786 MDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMS 1965
+ APYK L+HGF +D GRKMSKS+GN + P ++K LGADILRLW++S DY ++
Sbjct: 572 VTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVMKQLGADILRLWVSSVDYQADVR 631
Query: 1966 LSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTI 2145
+S ILK+ + YR+IRNT RFL GNL FDP + V + D+ +D++++ + +L +
Sbjct: 632 VSDAILKQVAEVYRKIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKV 691
Query: 2146 KAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAF 2325
K AY Y+FA + +I NFC+++L S YLD KD +Y D P RRS QT Y A
Sbjct: 692 KKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVSYETLLAL 751
Query: 2326 VRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLTLRDHV 2505
V+ APIL TADELWS+L +V T + FD+ + LRD V
Sbjct: 752 VKLSAPILPHTADELWSHLTFVEEQSVQLTDMPE--TITVPNSEATEEKFDRFMALRDDV 809
Query: 2506 TKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTVT-----PAN 2670
K LE R +IG + E L LFI ++T++ P +
Sbjct: 810 LKALETARNEKIIGKSLEANLKLYPNKENKELLASIKENLSQLFIVSELTISEENEAPND 869
Query: 2671 TDGFFVSAQPTTKAKCARCWHYRA---DIGAHPTHPEL 2775
F KA+ C R D+GA+P +P L
Sbjct: 870 AQSFATGKIAVEKAEGEMCERSRVISKDVGANPKYPTL 907
>gi|6226709|sp|P46213|SYI_THEMA ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|4981921|gb|AAD36431.1|AE001790_3 (AE001790)
isoleucyl-tRNA synthetase [Thermotoga maritima]
Length = 919
Score = 707 bits (1805), Expect = 0.0
Identities = 371/932 (39%), Positives = 536/932 (56%), Gaps = 16/932 (1%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
+YK TL+LP T FPM+ +L +E LE WE+ D Y + KG+PLF+LHDGPPYANG
Sbjct: 2 EYKNTLNLPKTSFPMKANLVNKEKVFLEEWEKMDLYNYVLEQRKGKPLFVLHDGPPYANG 61
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQF 369
IH+G A+NKILKDI++K K + G+ APY+PGWD HGLPIE + ++ G+ + +
Sbjct: 62 HIHIGTALNKILKDIVVKYKTMRGYRAPYVPGWDTHGLPIEHRVSQELGEKIKEMSPAEI 121
Query: 370 RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGT 549
R+KC E+A + +QR +FKRLG+ GDW+ PY TL +E + +V++G++ R
Sbjct: 122 RKKCEEFALRFVDIQREEFKRLGVRGDWENPYITLKPDYEVKILDVFKTLVEQGNVYRSL 181
Query: 550 KPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWT 729
KP++WC C +ALAEAEIEY D SP + V + + + D + IWT
Sbjct: 182 KPIYWCPRCRTALAEAEIEYHDHKSPSIYVKFRSKE--------------DPNFFIVIWT 227
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWTLPA++ I++ P +Y +V+ G+ +W GI +
Sbjct: 228 TTPWTLPANVGIALHPDYEYSVVK----VGEEKWVIATDLLDAFSKET-GIDCSNVVEKI 282
Query: 910 KGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
KG +E HP + DRT ++L ++VS E GTG VH APGHG+ED+ YG + Y
Sbjct: 283 KGKDLEGKEFVHPIFDDRTSRVILADYVSLETGTGCVHIAPGHGEEDYI----YGHVQ-Y 337
Query: 1090 SAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH 1269
++PVD G + + G+ I AN +I++ + HSYPH
Sbjct: 338 GLPIVSPVDEEGRFTEEAGKYK-----GMFIEDANEVIIEDLKRKGILVHASSITHSYPH 392
Query: 1270 CWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTIS 1449
CWR K P++FRAT QWFIS++ LR L+ I V W P+WG+ RI SM+E RPDW IS
Sbjct: 393 CWRCKGPVIFRATEQWFISVDHNNLRQKVLEEIDKVKWIPEWGRNRIRSMVEERPDWCIS 452
Query: 1450 RQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTE----- 1614
RQR WG PIP + G ++ VE++G + W+ + EL+ +
Sbjct: 453 RQRVWGTPIPAVKCKECGEV-VLDPKVIEHFMKIVEKEGTNAWFEKEVEELIPEDFVCPK 511
Query: 1615 --ADQYEKITDILDVWFDSGITHEAVLLER-GLPKPADLYLEGADQHRGWFQSSLLTGVA 1785
+EK+ D LDVW DSG + E + +R P P D+YLEG+DQHRGWF SS+ VA
Sbjct: 512 CGKRSFEKMLDTLDVWIDSGASFEYITTKREDHPFPLDMYLEGSDQHRGWFHSSIFLAVA 571
Query: 1786 MDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMS 1965
+APYK+ LTHGF D+ GRKMSKSLGN ++P ++++ GA+ILRLW+AS+DY N++
Sbjct: 572 KRGSAPYKEVLTHGFIKDEQGRKMSKSLGNVVDPMEVVEKYGAEILRLWLASSDYFNDIK 631
Query: 1966 LSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTI 2145
+S I+++ T+ YR+IRNT RFLLGNL FDP L VP ++ +DRW + R E+ +
Sbjct: 632 ISMRIVEQQTEVYRKIRNTFRFLLGNLEDFDPELDRVPHEKLLTIDRWALGRLQEIIKRA 691
Query: 2146 KAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAF 2325
Y Y+F+++ ++ +C+ +L SLYLDV KDRLY +D+ RRSAQT M+ + +
Sbjct: 692 TEYYDSYEFSKVYNLVVKYCTTELSSLYLDVVKDRLYVEAKDSIYRRSAQTVMHEILISL 751
Query: 2326 VRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLTLRDHV 2505
++ +API++FT +E++S+L Y DF+KLL++R+ V
Sbjct: 752 MKILAPIMTFTMEEVYSHLHEKDRKYKTVQAEYWPEYREEFIDRKLMEDFEKLLSIREDV 811
Query: 2506 TKVLEPMRANGVIGXXXXXXX----XXXXXXXXXXRWQPLTEELRFLFISGDVTVTPANT 2673
K LE R VIG +++ + EE LFI V+++ A+
Sbjct: 812 LKALEEKRQQDVIGHSLDAEVVLVPKNDTIKALLEKYRDILEE---LFIVSKVSLSDASG 868
Query: 2674 DGFFVSAQPTTK----AKCARCWHYRADIGAHPTHPELCGRCVTNVDG 2805
+ + T K KC RCW Y +I A P +C RC+ + G
Sbjct: 869 ELKGELVEVTVKHAEGEKCQRCWKYTTEISASEDFPGVCPRCLAVLKG 916
>gi|1174521|sp|P41972|SYI_STAAU ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|541337|pir||S40178
isoleucine--tRNA ligase (EC 6.1.1.5) - Staphylococcus
aureus >gi|437916|emb|CAA52296| (X74219) isoleucyl-tRNA
synthetase [Staphylococcus aureus]
Length = 917
Score = 681 bits (1739), Expect = 0.0
Identities = 372/926 (40%), Positives = 524/926 (56%), Gaps = 15/926 (1%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
DYK TL +P TDFPMRG LP +EP I E+W+ +D Y + KG F+LHDGPPYANG
Sbjct: 2 DYKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANG 61
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQF 369
+H+GHA+NKILKD I++ K + GF APY+PGWD HGLPIE A+ KK G + +F
Sbjct: 62 NLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKK-GVDRKKMSTAEF 120
Query: 370 RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGT 549
R+KC+E+A EQI+LQ++DF+RLG+ GD++ PY TL +EA +IR ++ DKG + +G
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180
Query: 550 KPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWT 729
KPV+W S+LAEAEIEY DK S + VA+ D + D IWT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKGVV---------DADAKFIIWT 231
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWT+P+++AI+V P L Y +G++ + A + +
Sbjct: 232 TTPWTIPSNVAITVHPELKYGQYNV---NGEKYIIAEALSDAVAEALDWDKASIKLEKEY 288
Query: 910 KGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
G +E + HPF DR ++ G+HV+ + GTG VHTAPGHG++D+ V Q+Y L
Sbjct: 289 TGKELEYVVAQHPFL-DRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQKYEL---- 343
Query: 1090 SAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH 1269
++P+D +GV+ F G+ KAN + D + HSYPH
Sbjct: 344 --PVISPIDDKGVFTEEGGQFE-----GMFYDKANKAVTDLLTEKGALLKLDFITHSYPH 396
Query: 1270 CWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTIS 1449
WR K P++FRATPQWF S+ + +R L AI + + WG+ RI +M+ +R +W IS
Sbjct: 397 DWRTKKPVIFRATPQWFASISK--VRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVIS 454
Query: 1450 RQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELL-------G 1608
RQR WGVP+P+F + + + VAD + G +IW+ + +LL G
Sbjct: 455 RQRVWGVPLPVFYAENGEIIMTKET--VNHVADLFAEHGSNIWFEREAKDLLPEGFTHPG 512
Query: 1609 TEADQYEKITDILDVWFDSGITHEAVLLERG-LPKPADLYLEGADQHRGWFQSSLLTGVA 1785
+ + K TDI+DVWFDSG +H VL R L PAD+YLEG+DQ+RGWF SS+ T VA
Sbjct: 513 SPNGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSSITTSVA 572
Query: 1786 MDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMS 1965
+PYK L+HGF +D G+KMSKSLGN I P ++K GADI RLW++STDY ++
Sbjct: 573 TRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVR 632
Query: 1966 LSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTI 2145
+S EILK+T+D YR+IRNT RF+LGN++ F+P +P S+++ +DR++++R E +
Sbjct: 633 ISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTAST 692
Query: 2146 KAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAF 2325
Y +D+ I Q + NF +V+L + YLD KD LY + D+ RRS QT +Y +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVDM 752
Query: 2326 VRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLTLRDHV 2505
+ +APIL TA+E+WS+ P ++V + + LRD V
Sbjct: 753 TKLLAPILVHTAEEVWSHTPHVKEESVHLA----DMPKVVEVDQALLDKWRTFMNLRDDV 808
Query: 2506 TKVLEPMRANGVIG-XXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTVTPANTDGF 2682
+ LE R VIG + + L LFI V V D
Sbjct: 809 NRALETARNEKVIGKSLEAKVTIASNDKFNASEFLTSFDALHQLFIVSQVKVVDKLDDQA 868
Query: 2683 F------VSAQPTTKAKCARCWHYRADIGAHPTHPELCGRC 2787
+ + KC RCW+Y D+GA LC RC
Sbjct: 869 TAYEHGDIVIEHADGEKCERCWNYSEDLGAVDELTHLCPRC 909
>gi|6137708|pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna
Synthetase Structure With Trna(Ile) And Mupirocin
>gi|6137710|pdb|1QU3|A Chain A, Insights Into Editing
From An Ile-Trna Synthetase Structure With Trna(Ile) And
Mupirocin
Length = 917
Score = 680 bits (1736), Expect = 0.0
Identities = 372/926 (40%), Positives = 524/926 (56%), Gaps = 15/926 (1%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
DY+ TL +P TDFPMRG LP +EP I E+W+ +D Y + KG F+LHDGPPYANG
Sbjct: 2 DYEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANG 61
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQF 369
+H+GHA+NKILKD I++ K + GF APY+PGWD HGLPIE A+ KK G + +F
Sbjct: 62 NLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKK-GVDRKKMSTAEF 120
Query: 370 RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGT 549
R+KC+E+A EQI+LQ++DF+RLG+ GD++ PY TL +EA +IR ++ DKG + +G
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180
Query: 550 KPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWT 729
KPV+W S+LAEAEIEY DK S + VA+ D + D IWT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKGVV---------DADAKFIIWT 231
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWT+P+++AI+V P L Y +G++ + A + +
Sbjct: 232 TTPWTIPSNVAITVHPELKYGQYNV---NGEKYIIAEALSDAVAEALDWDKASIKLEKEY 288
Query: 910 KGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
G +E + HPF DR ++ G+HV+ + GTG VHTAPGHG++D+ V QQY L
Sbjct: 289 TGKELEWVVAQHPFL-DRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYEL---- 343
Query: 1090 SAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH 1269
++P+D +GV+ F G+ KAN + D + HSYPH
Sbjct: 344 --PVISPIDDKGVFTEEGGQFE-----GMFYDKANKAVTDLLTEKGALLKLDFITHSYPH 396
Query: 1270 CWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTIS 1449
WR K P++FRATPQWF S+ + +R L AI + + WG+ RI +M+ +R +W IS
Sbjct: 397 DWRTKKPVIFRATPQWFASISK--VRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVIS 454
Query: 1450 RQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELL-------G 1608
RQR WGVP+P+F + + + VAD + G +IW+ + +LL G
Sbjct: 455 RQRVWGVPLPVFYAENGEIIMTKET--VNHVADLFAEHGSNIWFEREAKDLLPEGFTHPG 512
Query: 1609 TEADQYEKITDILDVWFDSGITHEAVLLERG-LPKPADLYLEGADQHRGWFQSSLLTGVA 1785
+ + K TDI+DVWFDSG +H VL R L PAD+YLEG+DQ+RGWF SS+ T VA
Sbjct: 513 SPNGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSSITTSVA 572
Query: 1786 MDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMS 1965
+PYK L+HGF +D G+KMSKSLGN I P ++K GADI RLW++STDY ++
Sbjct: 573 TRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVR 632
Query: 1966 LSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTI 2145
+S EILK+T+D YR+IRNT RF+LGN++ F+P +P S+++ +DR++++R E +
Sbjct: 633 ISDEILKQTSDDYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTAST 692
Query: 2146 KAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAF 2325
Y +D+ I Q + NF +V+L + YLD KD LY + D+ RRS QT +Y +
Sbjct: 693 INNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVDM 752
Query: 2326 VRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLTLRDHV 2505
+ +APIL TA+E+WS+ P ++V + + LRD V
Sbjct: 753 TKLLAPILVHTAEEVWSHTPHVKEESVHLA----DMPKVVEVDQALLDKWRTFMNLRDDV 808
Query: 2506 TKVLEPMRANGVIG-XXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTVTPANTDGF 2682
+ LE R VIG + + L LFI V V D
Sbjct: 809 NRALETARNEKVIGKSLEAKVTIASNDKFNASEFLTSFDALHQLFIVSQVKVVDKLDDQA 868
Query: 2683 F------VSAQPTTKAKCARCWHYRADIGAHPTHPELCGRC 2787
+ + KC RCW+Y D+GA LC RC
Sbjct: 869 TAYEHGDIVIEHADGEKCERCWNYSEDLGAVDELTHLCPRC 909
>gi|4836216|gb|AAD30388.1|AF096862_2 (AF096862) isoleucyl-tRNA
synthase [Fervidobacterium pennivorans]
Length = 897
Score = 679 bits (1732), Expect = 0.0
Identities = 361/912 (39%), Positives = 519/912 (56%), Gaps = 15/912 (1%)
Frame = +1
Query: 52 MRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKD 231
M+ +L +EP +L+ WE + Y + P +LLHDGPPYANG IHLG A+NKILKD
Sbjct: 1 MKANLVNKEPEMLKFWEEKEIYKKTLETRANAPTYLLHDGPPYANGDIHLGTAMNKILKD 60
Query: 232 IIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQL 411
+ + K + G+ P++PGWD HGLPIE + G+ + R+ C+E+A + + +
Sbjct: 61 FVTRYKTMRGYRVPFVPGWDTHGLPIEHRVTTSLGEEAKKKSPAEIRKLCKEFALKYVDI 120
Query: 412 QRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALA 591
QR +FKRLG+ GDW+ PY TLD +E + +V+ G++ RG KPV+WC C +ALA
Sbjct: 121 QREEFKRLGVKGDWEHPYITLDPDYEYHILDVFKTLVENGNVYRGNKPVYWCPTCRTALA 180
Query: 592 EAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISV 771
EAEIEY D SP + V + +D PD + IWTTTPWT+PA++AI++
Sbjct: 181 EAEIEYHDHESPSIYVKFQMVD------------KPDTYIV--IWTTTPWTIPANVAIAL 226
Query: 772 GPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPF 951
P YV ++ + W GI + + G +E + HP
Sbjct: 227 HPDYTYVKIK----VDEEYWIVAEGLLQKFAAD-VGI-DFEVVEKFVGKELEGKLTKHPL 280
Query: 952 YPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVY 1131
Y DRT ++L ++V+ EDGTG VHTAPGHG+ED+Q +Y L L+PVD G +
Sbjct: 281 Y-DRTSVVVLADYVTLEDGTGCVHTAPGHGEEDYQTGLKYNL------PVLSPVDDEGRF 333
Query: 1132 LPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATP 1311
+ GL IW AN +IV+ ++ HSYPHCWR K P++FRATP
Sbjct: 334 TKEAGKYE-----GLKIWDANKVIVEDLKNNGSLIKAGKISHSYPHCWRCKGPVMFRATP 388
Query: 1312 QWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVH 1491
QWFIS+++ LR L+ I V WYP WG+ RI +M++ RPDWTISRQR WGVPIP
Sbjct: 389 QWFISVDKNNLRGKVLEEIKKVKWYPAWGETRITAMVQERPDWTISRQRVWGVPIPAVKC 448
Query: 1492 RHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTE-------ADQYEKITDILD 1650
+ G ++ A+ V+++G D W+ LD EL+ + + +EK D LD
Sbjct: 449 KDCGEV-TLEPKVIEHFANIVKEKGTDAWFELDVNELIPADFKCPACGSKNFEKTHDTLD 507
Query: 1651 VWFDSGITHEAVLLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGF 1830
VW DSG + EAV+ +G P DLYLEG DQHRGWFQSS+ A AP+K +THGF
Sbjct: 508 VWMDSGCSWEAVIRSKGERFPVDLYLEGDDQHRGWFQSSIFLSTAKAGTAPFKAVVTHGF 567
Query: 1831 TVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTTDAYRR 2010
D+ GRKMSKSLGN I+P +I+ GADILRLW+ASTD+ + + + + I+++ + YR+
Sbjct: 568 IKDEQGRKMSKSLGNVIDPMEIVNKYGADILRLWVASTDFFDNIRVGKNIIEQQVEVYRK 627
Query: 2011 IRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQT 2190
+RNT R+LL NL+ F L+P ++ LD+W + R + + I Y ++++++
Sbjct: 628 LRNTLRYLLSNLYDFTEA-DLLPYEKLLPLDKWALGRLQKFIEQITQYYEGFEYSKVYNA 686
Query: 2191 ILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADEL 2370
+ +C+ +L ++YLD+ KDRLY +D+ RRSAQTA++++ A ++ +API+ FTA+E
Sbjct: 687 TVKYCTTELSAVYLDILKDRLYVEAKDSIYRRSAQTALHYILEALIKILAPIIPFTAEEA 746
Query: 2371 WSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLTLRDHVTKVLEPMRANGVIGX 2550
+ ++V W + +FD LL +RD V K LE RA+ +IG
Sbjct: 747 YQESHLKRYESVHLEYWPE--VRKEFIDEALLEEFDHLLLIRDDVLKALENARASDIIGH 804
Query: 2551 XXXX----XXXXXXXXXXXXRWQPLTEELRFLFISGDVTVTP--ANTDGFF--VSAQPTT 2706
+++ L EE FI VT++ + +G F V Q
Sbjct: 805 SLDAHVIIEAKNEELKNLLRKYESLLEE---FFIVSKVTLSENISGLNGQFANVLVQRAE 861
Query: 2707 KAKCARCWHYRADIGAHPTHPELCGRC 2787
KC RCW Y D G HPE C RC
Sbjct: 862 GQKCQRCWKYHPDTGKDLEHPETCPRC 888
>gi|6226181|sp|O66651|SYI_AQUAE ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|2983002 (AE000683)
isoleucyl-tRNA synthetase [Aquifex aeolicus]
Length = 956
Score = 673 bits (1718), Expect = 0.0
Identities = 389/909 (42%), Positives = 515/909 (55%), Gaps = 40/909 (4%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
D K TL+LP T+FPM+ +LP+REP ILE+W+ Y +++ KGR +F+LHDGPPYANG
Sbjct: 7 DLKDTLNLPRTEFPMKANLPQREPQILEKWK--GLYEKIQKERKGREVFVLHDGPPYANG 64
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGV---TLDA 360
IH+GHA+NKILKD+I K L G + +IPGWDCHGLPIE A+EK+ K + +L
Sbjct: 65 HIHVGHALNKILKDVINKYNLLIGKNVNFIPGWDCHGLPIERAVEKELSKKKIKKESLPK 124
Query: 361 VQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLI 540
+FR+ CREYA + + +QR DF RLG++GDW+ PY T+D ++EA EIR L K ++G
Sbjct: 125 TEFRELCREYAKKYVNIQREDFVRLGVLGDWEHPYLTMDPKYEAQEIRELGKFFERGLAY 184
Query: 541 RGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVP 720
R KPV+WC +A AEAE+EY +K P + V +P D ++
Sbjct: 185 RSKKPVYWCIYDKTAEAEAEVEYYEKEDPSIYVKFPLKSGEKFGI-------KDKKVFAI 237
Query: 721 IWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIH 900
IWTTTPWTLPA+L I V DYVLVE W E L+
Sbjct: 238 IWTTTPWTLPANLGIMVKEDADYVLVEVEDEV----WIVAKELMDKFFET-VNRPEGLVL 292
Query: 901 GSAKGAAMEQHILAHPFYPDRTIPLLLGNH-------------VSAEDGTGAVHTAPGHG 1041
+ KG + HPF + L VS + GTG VH APGHG
Sbjct: 293 ETVKGKDLVGLEYTHPFVEKEKLKGHLSEETLKNMWKIYPSEFVSLDTGTGLVHMAPGHG 352
Query: 1042 QEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXX 1221
QED+ V Q+YGL + PV G ++ P F L + ++ AN LIV
Sbjct: 353 QEDYVVGQRYGLEPYA------PVSDEGRFVEPAPEF----LINVRVFDANHLIVGVLKE 402
Query: 1222 XXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISME----QAALRSAALKAITHVTWYP 1389
++ HSYPHCWR K P++FRATPQWFI M+ LR AL+ I V W P
Sbjct: 403 KGFLVHEEKIRHSYPHCWRCKNPVIFRATPQWFIGMDIEFFGKTLRQRALEEIEKVKWIP 462
Query: 1390 QWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVE--QQ 1563
++G+ RI SM+ENRPDW ISRQR WGVPI +F + G + + +VA VE ++
Sbjct: 463 EYGKNRIKSMVENRPDWCISRQRFWGVPITVFYCENCGEII-KDREVFERVAQLVENSEK 521
Query: 1564 GVDIWYSLDQTELLGTE-------ADQYEKITDILDVWFDSGITHEAVLLERGLPKPADL 1722
G D+W+ L ++LL D + K DILDVWFDSG +H AV+ G K ADL
Sbjct: 522 GSDVWFELTSSQLLPEGYKCPKCGGDSFTKEEDILDVWFDSGCSHAAVIRPLGFQK-ADL 580
Query: 1723 YLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIK 1902
YLEG+DQHRGWFQ+SLL V APYK LTHGF VD+ GRKMSKSLGN I PQ+++K
Sbjct: 581 YLEGSDQHRGWFQASLLESVGSYLEAPYKAVLTHGFIVDEKGRKMSKSLGNVISPQEVVK 640
Query: 1903 TLGADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPL 2082
GADILRLW+ S DY+ ++ L + +LK+ D YR+IRNT RF++GNL+ F+P + +P
Sbjct: 641 EFGADILRLWVVSEDYTEDVKLGKNLLKKIADDYRKIRNTLRFIIGNLYDFNPRTNALPF 700
Query: 2083 SDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTM 2262
+ DRWI+ L + + Y ++ F + I NF L ++YLDV KDRLY
Sbjct: 701 EKLHHFDRWIISELQNLLKKVHENYEKFLFYRVHNHIKNFVITTLSAIYLDVLKDRLYVY 760
Query: 2263 REDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSY---LPGDHADNVLFTTWYDGX 2433
+ RRSAQTA++HL A AP LSFTA+ELW + L ++V +
Sbjct: 761 APASWERRSAQTALWHLLIALTTSTAPYLSFTAEELWEHVGKLDPSLPESVFL--YEMPK 818
Query: 2434 XXXXXXXXXXXXDFDKLLTLRDHVTKVLEPMR-ANGVIGXXXXXXXXXXXXXXXXXRWQP 2610
D++ LL +RD V + LE R G+I +
Sbjct: 819 PDENLKDEEVLKDYEILLKVRDEVMRALEVARKEKGIIKHPYEAKVYIRGDESVESLLKK 878
Query: 2611 LTEELRFLFISGDVTVT---PANTDG----FFVSAQPTTKAKCARCWHY 2736
+ L F F V + +G V KC RCW Y
Sbjct: 879 YEDYLNFFFTVSQVELREGGEVQIEGEELPVKVGVNKAEGEKCPRCWIY 927
>gi|2501011|sp|P73505|SYI_SYNY3 ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|1652625|dbj|BAA17545| (D90907) isoleucyl-tRNA
synthetase [Synechocystis sp.]
Length = 988
Score = 650 bits (1658), Expect = 0.0
Identities = 367/848 (43%), Positives = 490/848 (57%), Gaps = 20/848 (2%)
Frame = +1
Query: 4 SQDYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYA 183
++ YK T++LP T F MR + KREP I + W+ YA L A + LF+LHDGPPYA
Sbjct: 4 AKSYKDTVNLPQTRFDMRANANKREPEIQQYWQEKGIYADL-ADNNPKDLFVLHDGPPYA 62
Query: 184 NGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAI-EKKYGKVGVTLDA 360
NG +H+GHA+NK+LKDII K K L G Y+PGWDCHGLPIE+ + + L
Sbjct: 63 NGALHMGHALNKVLKDIINKYKLLQGHKVHYVPGWDCHGLPIELKVLQSLKSSERAELTP 122
Query: 361 VQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLI 540
+ R K R++A + Q Q F+R GI GDW PY TL +EA +I + KG++
Sbjct: 123 LTLRHKARDFALKAQQEQAVGFQRYGIWGDWKKPYLTLTPEYEAAQIGVFGAMALKGYIY 182
Query: 541 RGTKPVHWCFDCGSALAEAEIEYTD-KTSPMVDVAYPALDPSALAAVFNATLPPDVQLAV 717
RG KPVHW +ALAEAE+EY + TS + V++P AA A D LAV
Sbjct: 183 RGLKPVHWSPSSRTALAEAELEYPEGHTSRSIYVSFPITQAGEKAAEILAPYIDD--LAV 240
Query: 718 PIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLI 897
IWTTTPWTLP +LA+++ P L Y +VE +H R + +G+ +L +
Sbjct: 241 AIWTTTPWTLPGNLAVALNPELTYAVVETESHIFHRSYLIVALDLVEKLSETFGV-KLTV 299
Query: 898 HGSAKGAAMEQHILAHPFYPDRTIPLLLG-NHVSAEDGTGAVHTAPGHGQEDHQVFQQYG 1074
+ +G ++E HP + DR P+++G ++V+ E GTG VHTAPGHGQED+ V Q+YG
Sbjct: 300 KVTLQGESLENTCYQHPLF-DRVSPIVIGGDYVTTESGTGLVHTAPGHGQEDYVVGQRYG 358
Query: 1075 LLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWK-ANPLIVDXXXXXXXXXXXXEM 1251
L L+PVDA G F AGL++ AN I++
Sbjct: 359 L------PILSPVDAAGNLTEEAGKF-----AGLNVLNDANEAIINALQDQKVLLKEEAY 407
Query: 1252 HHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENR 1431
H YP+ WR K P +FRAT QWF S+E R ALKAI VTW P G+ RI M+ +R
Sbjct: 408 EHKYPYDWRTKKPTIFRATEQWFASVE--GFRDQALKAIKEVTWIPTQGENRITPMVGDR 465
Query: 1432 PDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLG- 1608
DW ISRQR WGVPIP+F + P + V + ++G D W+ L ELL
Sbjct: 466 SDWCISRQRAWGVPIPVFYDEETSEPLLTEETI-NHVQQIIAEKGSDAWWELTVEELLPE 524
Query: 1609 ---TEADQYEKITDILDVWFDSGITHEAVL--LERGLPKPADLYLEGADQHRGWFQSSLL 1773
Y K D +DVWFDSG + AV R L P D+YLEG+DQHRGWFQSSLL
Sbjct: 525 AYRNNGRTYRKGEDTMDVWFDSGSSWAAVANAKNRPLKYPVDMYLEGSDQHRGWFQSSLL 584
Query: 1774 TGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIK---------TLGADILR 1926
T VA++ APYK LTHGF +D+ G KMSKSLGN ++P II GAD+LR
Sbjct: 585 TSVAVNGIAPYKTVLTHGFVLDEKGHKMSKSLGNVVDPYQIINGGKNQKQEPAYGADVLR 644
Query: 1927 LWIASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDR 2106
LW+AS DY+N++ + Q ILK+ D +IRNTARFLLGNLH F+P V D+ LDR
Sbjct: 645 LWVASVDYANDVPIGQGILKQLVDIRNKIRNTARFLLGNLHDFNPETDAVAYEDLPELDR 704
Query: 2107 WIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRR 2286
+++HR E+ + AY + F + QT+ NFC VDL + YLD+ KDRLY +AP RR
Sbjct: 705 YMLHRMTEVFTEVTEAYESFQFFKFFQTVQNFCVVDLSNFYLDIAKDRLYISAPNAPRRR 764
Query: 2287 SAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDH-ADNVLFTTWYDGXXXXXXXXXXX 2463
S QT + + IAP+L A+++W +LP + ++V + W +
Sbjct: 765 SCQTILQLALENLTKAIAPVLCHLAEDIWQFLPYEKPTESVFQSGWVN--LDAQWQQPQL 822
Query: 2464 XXDFDKLLTLRDHVTKVLEPMRANGVIG 2547
+ L LRD + ++LE R + VIG
Sbjct: 823 AQKWVSLRQLRDGINQLLEQARRDKVIG 850
Score = 36.0 bits (81), Expect = 1.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 2713 KCARCWHYRADIGAHPTHPELCGRCVTNVDG 2805
KC RCW+Y +G+ P +C RC + G
Sbjct: 956 KCERCWNYSTQVGSFSDDPTICERCNEALQG 986
>gi|5932379|gb|AAD56932.1|AF180145_24 (AF180145) isoleucyl-tRNA
synthetase [Zymomonas mobilis]
Length = 941
Score = 647 bits (1651), Expect = 0.0
Identities = 368/928 (39%), Positives = 530/928 (56%), Gaps = 31/928 (3%)
Frame = +1
Query: 4 SQDYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYA 183
++D++ T+ LP T FPM+ L K+EP IL RW+++D Y QLR KG F+LHDGPPYA
Sbjct: 12 ARDWRPTVFLPKTSFPMKAGLAKKEPEILARWQKEDLYQQLREQRKGAERFILHDGPPYA 71
Query: 184 NGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLD-- 357
NG IH+GHA+NKILKDII+++K L G D PYIPGWDCHGLPIE +E+++ K + +D
Sbjct: 72 NGDIHIGHALNKILKDIIMRTKPLLGKDVPYIPGWDCHGLPIEWKVEEQFRKKKLNVDKD 131
Query: 358 --AVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKG 531
AV+FRQKCR+YA + QR++FKRLG++G+WD PY T++F EA L + + G
Sbjct: 132 VNAVEFRQKCRKYAVHWVDTQRQEFKRLGVLGEWDNPYLTMNFEAEAIISGELMRFSETG 191
Query: 532 HLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQL 711
+ RG KPV W +ALAEAE++Y D S +D+A+ D + +P V
Sbjct: 192 QIYRGAKPVLWSVVEKTALAEAEVDYADVDSTTIDLAFKITD---------SKIPELVGG 242
Query: 712 AVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAEL 891
IWTTTPWT+PA+ A++ GP +DYVLV+ + + G A +
Sbjct: 243 YAVIWTTTPWTIPANRALAYGPDIDYVLVD--LNGKHYLFAEALLEDSLKRIGHEGDAPV 300
Query: 892 LIHGSAKGAAMEQHILAHPFYPDRTI-----PLLLGNHVSAEDGTGAVHTAPGHGQEDHQ 1056
L G KGA ++ I HP + P L G+HV+ E GTG VH AP +G++D
Sbjct: 301 LWRG--KGAELDGSIAQHPMFEKGGFFAEPRPFLGGSHVTTEAGTGIVHMAPDYGEDDFL 358
Query: 1057 VFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXX 1236
+ + + + ++ + +++ E + I A+ I
Sbjct: 359 LCKAHNIDPVFAVEDDGRYRKDWLWMG-----GEGLVISPKINAADGPICSDLREVGALL 413
Query: 1237 XXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAA---------LRSAALKAITHVTWYP 1389
+HHSYPH WR K +++R TPQWFI++++ LR ALKAI V+W+P
Sbjct: 414 ATSVLHHSYPHSWRSKAKLIYRCTPQWFIALDRPVEKGAIAGKTLRETALKAIDEVSWFP 473
Query: 1390 QWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGV 1569
G+ RI +M+E RPDW ISRQR WGVPI L+V+R SG + R + ++ ++G
Sbjct: 474 AKGKNRIQTMVEGRPDWVISRQRAWGVPITLYVNRESG-DYLRDPEVNARILAAFRKEGA 532
Query: 1570 DIWYSLDQTELLGTE--ADQYEKITDILDVWFDSGITHEAVLLER-GLPKPADLYLEGAD 1740
D W+ + LG + + YE + DILDVWFDSG TH V+ R G A LYLEG+D
Sbjct: 533 DAWFKANHQLFLGDKYRLEDYEPVNDILDVWFDSGSTHAFVVEARYGEGTRAQLYLEGSD 592
Query: 1741 QHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADI 1920
QHRGWFQSSLL APY+ LTHGFT+D GRKMSKS+GN I+P +I GADI
Sbjct: 593 QHRGWFQSSLLESCGSRGHAPYEAVLTHGFTLDGTGRKMSKSVGNVIDPLKVINESGADI 652
Query: 1921 LRLWIASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIAL 2100
LR+W+ASTDY+ ++ +S+E+L T+D YR++RN+ R+LLG L GF V L+D+ L
Sbjct: 653 LRMWVASTDYNEDVRISKEVLSGTSDGYRKLRNSFRYLLGALEGFSEE-EKVDLADLPEL 711
Query: 2101 DRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLY-TMREDAP 2277
+++I+H EL Q + + + F ++ + +F + DL + + D+ KDRLY + E AP
Sbjct: 712 EKYILHLLAELDQALHESVNGFAFNRYLRLLSDFVNNDLSAFFFDIRKDRLYCDVGEAAP 771
Query: 2278 ----GRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHADNVLFTTW--YDGXXX 2439
RR+ +T + L A VR+ APIL FTA+E+W + D A +V + W DG
Sbjct: 772 QGTEERRAYRTVLDILFHALVRYAAPILCFTAEEVWLHRFPD-AGSVHLSVWPEVDGQWK 830
Query: 2440 XXXXXXXXXXDFDKLLTLRDH---VTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQP 2610
+K +R+ VT+ +EP+R ++G
Sbjct: 831 NAVLG-------EKWAVIREQRQIVTEKIEPLRREKIVGSSLEAEVTLPVDAATA----K 879
Query: 2611 LTEELRFLFISGDVTVTPANTDGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRC 2787
+ + F I + + ++ T KC RCW + ++ LC RC
Sbjct: 880 ILSSVDFSEICITAKINLVDASDAAITVDRTQNHKCGRCWQHLPEV---EEDGALCDRC 935
>gi|4009476 (AF068901) isoleucine-tRNA synthetase [Streptococcus
pneumoniae]
Length = 930
Score = 622 bits (1588), Expect = e-177
Identities = 333/797 (41%), Positives = 470/797 (58%), Gaps = 8/797 (1%)
Frame = +1
Query: 16 KTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQI 195
K TL+L T+FPMR LP +EP + WE Y + + +G+P F LHDGPPYANG I
Sbjct: 4 KDTLNLGKTEFPMRAGLPTKEPVWQKEWEDAKLYQRRQELNQGKPHFTLHDGPPYANGNI 63
Query: 196 HLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQ 375
H+GHA+NKI KDII++SK + GF AP+IPGWD HGLPIE + K+ G +D V++ +
Sbjct: 64 HVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLPIEQVLSKQ-GVKRKEMDLVEYLK 122
Query: 376 KCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKP 555
CREYA Q+ QR DFKRLG+ GDW+ PY TL +EA +IR ++ +KG++ RG KP
Sbjct: 123 LCREYALSQVDKQREDFKRLGVSGDWENPYVTLTPDYEAAQIRVFGEMANKGYIYRGAKP 182
Query: 556 VHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTT 735
V+W + SALAEAEIEY D S + A D + D + +WTTT
Sbjct: 183 VYWSWSSESALAEAEIEYHDLVSTSLYYANKVKDGKGVL---------DTDTYIVVWTTT 233
Query: 736 PWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKG 915
P+T+ AS ++VG +DYVLV+ G+ R ++G A++ + + +G
Sbjct: 234 PFTITASRGLTVGADIDYVLVQPV---GEARKFVVAAELLTSLSEKFGWADVQVLETYRG 290
Query: 916 AAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSA 1095
+ + HP+ ++LG+HV+ + GTG VHTAPG G++D+ V G+ N+
Sbjct: 291 QELNHIVTEHPWDTAVEELVILGDHVTTDSGTGIVHTAPGFGEDDYNV----GIANNLEV 346
Query: 1096 AELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCW 1275
A VD RG+ + P E G K P +++ E+ HSYP W
Sbjct: 347 AVT--VDERGIMMKNAGPEFE----GQFYEKVVPTVIEKLGNLLLAQE--EISHSYPFDW 398
Query: 1276 RHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQ 1455
R K PI++RA PQWF S+ + R L I V ++ +WG+ R+ +MI +R DW ISRQ
Sbjct: 399 RTKKPIIWRAVPQWFASVSK--FRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQ 456
Query: 1456 RTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELL-------GTE 1614
RTWGVP+P+F A A + VA E+ G IW+ D +LL G+
Sbjct: 457 RTWGVPLPIFYAEDGTAI--MVAETIEHVAQLFEKHGSSIWWERDAKDLLPEGFTHPGSP 514
Query: 1615 ADQYEKITDILDVWFDSGITHEAVLLERG-LPKPADLYLEGADQHRGWFQSSLLTGVAMD 1791
+++K TDI+DVWFDSG + V++ R L PADLYLEG+DQ+RGWF SSL+T VA
Sbjct: 515 NGEFKKETDIMDVWFDSGSSWNGVVVNRPELTYPADLYLEGSDQYRGWFNSSLITSVANH 574
Query: 1792 NAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLS 1971
APYKQ L+ GF +D G KMSKSLGN I P D+ K GA+ILRLW+ S D SN++ +S
Sbjct: 575 GVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVTSVDSSNDVRIS 634
Query: 1972 QEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKA 2151
+IL + ++ YR+IRNT RFL+ N F+P V ++ ++D+++ R +L +TI+
Sbjct: 635 MDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQLVKTIRD 694
Query: 2152 AYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVR 2331
AY ++F I + ++NF +VDL + YLD KD +Y + RR QT Y + +
Sbjct: 695 AYADFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFYDILVKITK 754
Query: 2332 WIAPILSFTADELWSYLPGDHADNV 2406
+ PIL TA+E+WSYL + D V
Sbjct: 755 LLTPILPHTAEEIWSYLEFETEDFV 779
>gi|730869|sp|P41257|SYI_CAMJE ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|558850 (U15295)
isoleucyl-tRNA synthetase [Campylobacter jejuni]
Length = 917
Score = 587 bits (1498), Expect = e-166
Identities = 336/786 (42%), Positives = 462/786 (58%), Gaps = 20/786 (2%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERW-ERDDFYAQLRAHAKG-RPLFLLHDGPPYA 183
DYK TL LP+T F MR +L + EP ++W E++ Y +++ + K + F LHDGPPYA
Sbjct: 2 DYKETLLLPSTTFAMRANLAELEPQRFKKWFEQNYAYEKMKENRKNAKKSFTLHDGPPYA 61
Query: 184 NGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAV 363
NG IH+GHA+NKILK+ IIK+ + G + PGWDCHGLPIE +E K G+ +L
Sbjct: 62 NGHIHIGHALNKILKETIIKTHYFKGESVRFTPGWDCHGLPIEQQVEVKLGEKKKSLSKK 121
Query: 364 QFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIR 543
+ R+ CR++A+E + +QR +FK LGII DWD PY T+ F FEA R L +I KG L
Sbjct: 122 EIREFCRQHASEFVDIQREEFKNLGIIADWDKPYLTMKFEFEAAIYRTLCEIAKKGLLCE 181
Query: 544 GTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPI 723
+KPV W + SALAEAE+EY DK + VA+ LD A + + + + I
Sbjct: 182 RSKPVFWSWAAKSALAEAEVEYQDKEDYSIFVAFD-LDVKACKKLGVS------KASAVI 234
Query: 724 WTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHG 903
WTTTPWTL A+ AI++ P +YV+ T G G+ I
Sbjct: 235 WTTTPWTLVANQAIALNPNENYVI----TKEG-----LIFASALLKSMVEKGLTSGEIQK 285
Query: 904 SAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLN 1083
E+ +P +++ L++G HV + G+G VHTAPGHG++D+ +YG+
Sbjct: 286 ELNAKEFEKLEAINPLNGRKSV-LIMGEHVLMDGGSGLVHTAPGHGEDDYYACLKYGI-- 342
Query: 1084 HYSAAELNPVDARGVYLPT------TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXX 1245
L PVD G Y T P GLHI+KAN I++
Sbjct: 343 ----EVLMPVDDSGCYDETLRAKRLLPSHLLEEFIGLHIFKANEKILE--LLGEKLLHSS 396
Query: 1246 EMHHSYPHCWRHKTPIVFRATPQWFISMEQ-----AALRSAALKAITHVTWYPQWGQARI 1410
+ HSYP CWR P+++RAT QWFI M++ LR A + + T+YPQ G RI
Sbjct: 397 KFIHSYPFCWRTHKPVIYRATKQWFILMDEPKLQGKTLRECAKEQLLKTTFYPQSGVKRI 456
Query: 1411 LSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLD 1590
SM+ENRPDW ISRQR WG PI F +++ L VA E+ G D W+ +
Sbjct: 457 GSMVENRPDWCISRQRDWGTPIAFFRDKNT-KEVIFDDELFDFVAAIFEKHGADAWWEFE 515
Query: 1591 QTELLGT----EADQYEKITDILDVWFDSGITHEAVL---LERGLPKPADLYLEGADQHR 1749
+L+ T A+ EK+ DILDVWFDSG T AVL L K A +YLEG+DQHR
Sbjct: 516 IKDLIPTNSKYNAENLEKVYDILDVWFDSGSTFNAVLNSGLYDAGEKRASMYLEGSDQHR 575
Query: 1750 GWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRL 1929
GWFQSSLL G A++ + PY+ LTHGFT D+ G+KMSKS GN I P+ + KT G +ILRL
Sbjct: 576 GWFQSSLLVGTAINESTPYESILTHGFTTDEKGQKMSKSKGNVIAPEYVAKTYGVEILRL 635
Query: 1930 WIASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRW 2109
WI +DYS+++ +S ILK+ + YR+IRNT RFLL N + L + + + +D+W
Sbjct: 636 WILLSDYSSDLKISDNILKQVGEQYRKIRNTIRFLLANTN----DLKDLEVKEFSFIDKW 691
Query: 2110 IVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRS 2289
I+ RA ++ + K A+ Y+FA+ +LNF S DL +YLD++KDRLY E+A R+S
Sbjct: 692 ILSRASKVFKASKEAFFAYEFAKGFSLLLNFLSADLSGIYLDISKDRLYCDSENAQRRKS 751
Query: 2290 AQTAMYHLTAAFVRWIAPILSFTADE 2367
AQ AM + + +A LS++ DE
Sbjct: 752 AQVAMALIAKELLNLLASNLSYSVDE 777
>gi|3024677|sp|P56456|SYI_HELPY ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|2314596|gb|AAD08464.1| (AE000642) isoleucyl-tRNA
synthetase (ileS) [Helicobacter pylori 26695]
Length = 920
Score = 574 bits (1463), Expect = e-162
Identities = 340/927 (36%), Positives = 503/927 (53%), Gaps = 24/927 (2%)
Frame = +1
Query: 7 QDYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYAN 186
++YK TL+L T F M+G+L EP +W+ + +++A F LHDGPPYAN
Sbjct: 2 EEYKDTLNLNTTTFSMKGNLSVNEPKTYAKWQEQQAFKRMQARKDNHGDFTLHDGPPYAN 61
Query: 187 GQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLD-AV 363
G +HLGHA+NKILKDI++K ++ G Y PGWDCHGLPIE I ++ K +L+
Sbjct: 62 GHLHLGHALNKILKDIVVKREYFKGKKIYYTPGWDCHGLPIEQQILERLEKEKTSLENPT 121
Query: 364 QFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIR 543
FR+KCR++A + +++Q+ +F +LG++GD++ PYKT+DF+FEA RAL ++ KG L
Sbjct: 122 LFREKCRDHAKKFLEIQKNEFLQLGVLGDFEDPYKTMDFKFEASIYRALVEVAKKGLLKE 181
Query: 544 GTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPI 723
KP++W + C SALAEAE+EY K SP + VA+ L +L + + ++ I
Sbjct: 182 RHKPIYWSYACESALAEAEVEYKMKKSPSIFVAF-GLKKESLEKL------KVKKASLVI 234
Query: 724 WTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHG 903
WTTTPWTL A++AI++ Y L T G G+ + I
Sbjct: 235 WTTTPWTLYANVAIALKKDAVYAL----TQKGY-----LVAKALHEKLAALGVVDNEITH 285
Query: 904 SAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLN 1083
+E + +P R + LG HV EDGTGAVHTAPGHG+ED+ + +Y L
Sbjct: 286 EFNSNDLEYLVATNPLN-QRDSLVALGEHVGLEDGTGAVHTAPGHGEEDYYLGLRYNL-- 342
Query: 1084 HYSAAELNPVDARGVYLPTT--PPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHH 1257
L VD +G Y + + G H++KA I++ E+ H
Sbjct: 343 ----EVLMSVDEKGCYDEGIIHNQLLDESYLGEHVFKAQKRIIEQLGDSLLLEQ--EIEH 396
Query: 1258 SYPHCWRHKTPIVFRATPQWFISME---------QAALRSAALKAITHVTWYPQWGQARI 1410
SYPHCWR P+++RAT QWFI M+ Q LR AL AI V + P G+ R+
Sbjct: 397 SYPHCWRTHKPVIYRATTQWFILMDEPFIQNDGSQKTLREVALDAIEKVEFVPSSGKNRL 456
Query: 1411 LSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLD 1590
+MIENRPDW +SRQR WGVP+ F+ + + P S L VA+ E++G D+W+
Sbjct: 457 KTMIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVL-EHVANLFEKKGCDVWWEYS 515
Query: 1591 QTELLGT----EADQYEKITDILDVWFDSGITHEAVLL----ERGLPKPADLYLEGADQH 1746
+LL +A YEKI ILDVWFDSG T +AVL E+G P+D+ LEG+DQH
Sbjct: 516 VKDLLPPSYQEDAKHYEKIMHILDVWFDSGSTFKAVLEDYHGEKG-QSPSDVILEGSDQH 574
Query: 1747 RGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILR 1926
RGWFQSSLL G ++N AP+K+ +THGF VD+ G KMSKS GN + ++KT G+D++R
Sbjct: 575 RGWFQSSLLIGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHGSDVVR 634
Query: 1927 LWIASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDR 2106
LW+A DY N++ +SQ +T Y++ RNT +FLL N D +L + LD
Sbjct: 635 LWVAFNDYQNDLRVSQTFFTQTEQHYKKFRNTLKFLLANFSDMD-LKNLERPHNFSPLDH 693
Query: 2107 WIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRR 2286
+++ + + +A+ +DF + + ++ F + +L +YLD KD LY ++ R+
Sbjct: 694 FMLETLETISAGVNSAFEEHDFVKGLNILMAFVTNELSGIYLDACKDSLYCDSKNNEKRQ 753
Query: 2287 SAQTAMYHLTAAFVRWIAPILSFTADELWSYLPG----DHADNVLFTTWYDGXXXXXXXX 2454
+ Q + + ++APIL+ T +E+ + A +V
Sbjct: 754 AIQMVLLATASKLCYFLAPILTHTIEEVLEHSQALRIFLQAKDVFDLKDISVSEKLHLKE 813
Query: 2455 XXXXXDFDKLLTLRDHVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFL 2634
+F+ +L LR + L+ ++ GVI + L EEL +
Sbjct: 814 FKKPENFEAVLALRSAFNEELDRLKKEGVIKNSLECAIEVKEKALD----ENLVEELLMV 869
Query: 2635 FISGDVTVTPANTDGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRC 2787
G + T F + P KC RCW +++++ P C RC
Sbjct: 870 SFVGIAKEKLSETPAFTLFKAPF--YKCPRCWRFKSELENTP-----CKRC 913
>gi|4155922 (AE001554) ISOLEUCYL-TRNA SYNTHETASE [Helicobacter pylori
J99]
Length = 920
Score = 570 bits (1452), Expect = e-161
Identities = 342/927 (36%), Positives = 505/927 (53%), Gaps = 27/927 (2%)
Frame = +1
Query: 7 QDYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYAN 186
++YK TL+L T F M+G+L EP +W+ + +++ F LHDGPPYAN
Sbjct: 2 KEYKDTLNLNETTFSMKGNLSVNEPKTYAKWQEQQAFKRMQNRKDNHGDFTLHDGPPYAN 61
Query: 187 GQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLD-AV 363
G +HLGHA+NKILKDI+IK ++ G Y PGWDCHGLPIE I ++ K +L+
Sbjct: 62 GHLHLGHALNKILKDIVIKREYFKGKKIYYTPGWDCHGLPIEQQILEQLEKEKTSLENPT 121
Query: 364 QFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIR 543
FR+KCR++A + +++Q+ +F +LG++GD++ PYKT+DF+FEA RAL + KG L
Sbjct: 122 LFREKCRDHAKKFLEIQKNEFLQLGVLGDFEDPYKTMDFKFEASIYRALVGVAKKGLLKE 181
Query: 544 GTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPI 723
KP++W + C SALAEAE+EY K SP + VA+ L L + + ++ I
Sbjct: 182 RHKPIYWSYACESALAEAEVEYKMKKSPSIFVAFD-LKKEGLEKL------KVKKASLVI 234
Query: 724 WTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHG 903
WTTTPWTL A++AI++ Y L T G G+ + I
Sbjct: 235 WTTTPWTLYANVAIALKKDAVYAL----TQKGY-----LVAKALHEKLAALGVVDNAITH 285
Query: 904 SAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLN 1083
+E + +P R ++LG+HVS EDGTGAVHTAPGHG+ED+ + +Y L
Sbjct: 286 EFNSNDLEYLVATNPLN-QRDSLVVLGDHVSLEDGTGAVHTAPGHGEEDYYLGLKYHL-- 342
Query: 1084 HYSAAELNPVDARGVYLPTT--PPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHH 1257
L VD +G Y + + G HI+KA I++ E+ H
Sbjct: 343 ----EVLMSVDEKGCYDEGIIHNQLLDKSYLGEHIFKAQKRIIEQLGDSLLLER--EIEH 396
Query: 1258 SYPHCWRHKTPIVFRATPQWFISME---------QAALRSAALKAITHVTWYPQWGQARI 1410
SYPHCWR P+++RAT QWFI M+ Q LR AL AI V + P G+ R+
Sbjct: 397 SYPHCWRTHKPVIYRATTQWFILMDEPFIQNDGSQKTLREVALDAIEKVEFVPSSGKNRL 456
Query: 1411 LSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLD 1590
+MIENRPDW +SRQR WGVP+ F+ + + P S L VA+ E++G D+W+ +
Sbjct: 457 KTMIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVL-EHVANLFEEKGCDVWWEYN 515
Query: 1591 QTELLGTE----ADQYEKITDILDVWFDSGITHEAVLL----ERGLPKPADLYLEGADQH 1746
+LL A YEK+ ILDVWFDSG T +AVL E+G P+D+ LEG+DQH
Sbjct: 516 IKDLLPPSYQDNAKHYEKVMHILDVWFDSGSTFKAVLEDYHGEKG-QSPSDVVLEGSDQH 574
Query: 1747 RGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILR 1926
RGWFQSSLL G ++N AP+K+ +THGF VD+ G KMSKS GN + +++K G+D++R
Sbjct: 575 RGWFQSSLLIGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVR 634
Query: 1927 LWIASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDR 2106
LW+A DY N++ +SQ +T Y++ RNT +FLL N D +L D LD
Sbjct: 635 LWVAFNDYQNDLRVSQTFFIQTEQHYKKFRNTLKFLLANFSDMD-LKNLERPHDFSPLDH 693
Query: 2107 WIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRR 2286
+I+ + + +A+ +D + + ++ F + +L +YLD KD LY ++ R+
Sbjct: 694 FILEALETISAGVNSAFEEHDLVKGLNILMAFVTNELSGIYLDACKDSLYCDSKNNEKRQ 753
Query: 2287 SAQTAMYHLTAAFVRWIAPILSFTADE-------LWSYLPGDHADNVLFTTWYDGXXXXX 2445
+ Q + + + ++APIL+ T +E L ++L A +V
Sbjct: 754 AIQMVLLAVASQLCYFLAPILTHTIEEVLEHSQVLRAFL---QAKDVFDLKGISVLEKLH 810
Query: 2446 XXXXXXXXDFDKLLTLRDHVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEEL 2625
+F+ +L LR + L+ ++ GV+ + L EEL
Sbjct: 811 LKEFKKPENFEAVLALRSAFNEELDRLKKEGVV----KNSLECAIEVKEKALCENLVEEL 866
Query: 2626 RFLFISGDVTVTPANTDGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRC 2787
+ G + T F + P KC RCW +++++ P C RC
Sbjct: 867 LMVSFVGVAKEKLSETPAFTLFKAPF--YKCPRCWRFKSELENTP-----CKRC 913
>gi|2501010|sp|P75258|SYI_MYCPN ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|2146323|pir||S73648
isoleucine-tRNA ligase ileS - Mycoplasma pneumoniae
(SGC3) (ATCC 29342) >gi|1673995 (AE000029) Mycoplasma
pneumoniae, isoleucine-tRNA ligase; similar to GenBank
Accession Number S40178, from S. aureus [Mycoplasma
pneumoniae]
Length = 861
Score = 480 bits (1223), Expect = e-134
Identities = 277/786 (35%), Positives = 432/786 (54%), Gaps = 7/786 (0%)
Frame = +1
Query: 16 KTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQI 195
K TL +P T F M+G L +E W+ Y +L K +P +LHDGPPYANG I
Sbjct: 4 KKTLLMPQTAFEMQGKLTTKEQQFQAFWQSKRIYQKLHRQNKDKPQKILHDGPPYANGNI 63
Query: 196 HLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQ 375
H+GHA+NKILKD +++S +L GF +IPGWDCHGLPIE A+ KK + +L + R
Sbjct: 64 HVGHALNKILKDFVLRSWNLQGFGTVFIPGWDCHGLPIEHAVSKKDPQHYASLSLSEKRD 123
Query: 376 KCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKP 555
C+++A QI +Q+ F+RLG++ D+ YKT+D F+ +E+ + V K + + KP
Sbjct: 124 LCKQFALSQIAIQKAQFQRLGLLNDFSKYYKTIDESFQQNELDLFLQAVKKDLIFQALKP 183
Query: 556 VHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTT 735
+W ++LAEAEIEY + + + + + V +A L +L V WTTT
Sbjct: 184 TYWSPVSRTSLAEAEIEYKEVKTIGLYLTF--------TVVQSAVLNSGTKLLV--WTTT 233
Query: 736 PWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKG 915
PWTLP + AI+V P +Y+L T++ ++ ++G + + + G
Sbjct: 234 PWTLPTNQAIAVHPQFEYLLF---TYNNEQ--YVVLASLFESLKTKFGWTDAIQVQTISG 288
Query: 916 AAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSA 1095
+ ++ H Y D+ P+LLGNHV +GTG VHT+P +G +D + +Q N +
Sbjct: 289 SQLQNTTYKHCLY-DKVNPVLLGNHVLCNEGTGLVHTSPAYGLDDFYLCKQ----NKLNE 343
Query: 1096 AELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCW 1275
A L +D +GV+ T ++ L GL KAN +I++ H PH W
Sbjct: 344 A-LVSLDEKGVFNDT---LNDPVLTGLFYLKANDVIIERLKQHHNFVFSESFLHREPHDW 399
Query: 1276 RHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQ 1455
R KTP+++RA+ Q FI + +++S + I V + + R+ M+ R +W ISRQ
Sbjct: 400 RSKTPVIYRASKQLFIKTK--SIQSKLKRQIKRVKFVNNKNKERLQEMLLQRAEWCISRQ 457
Query: 1456 RTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQ---- 1623
R WG+PIPL ++ ++ ++++ G+D W+ D L + Q
Sbjct: 458 RVWGLPIPLI---YADNQPLLDVTTIKYTIQQLKKYGIDSWFEKDINFFLNPKKIQPGVE 514
Query: 1624 YEKITDILDVWFDSGITHEAVLLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAP 1803
Y+K TD L+VWFDSG T+ VL+ L PADLYLEG+DQ+RGWF SS G+ + P
Sbjct: 515 YKKETDTLEVWFDSGSTYN-VLISNKLNFPADLYLEGSDQYRGWFNSSASCGIIQTDQLP 573
Query: 1804 YKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEIL 1983
+K ++HGFT+D+HG KMSKSLGN ++P + GADILRLW+ + D+ + + I+
Sbjct: 574 FKSLISHGFTLDEHGNKMSKSLGNVVDPLKLCDQYGADILRLWVTNVDWQVDNRIGDNII 633
Query: 1984 KRTTDAYRRIRNT-ARFLLGNLHGFDPTLHLVPLSD-MIAL-DRWIVHRAFELQQTIKAA 2154
K+ + YRRIRN+ RF+LGNL+ F + + D AL D+ ++H+ L Q +
Sbjct: 634 KQIVEQYRRIRNSLLRFILGNLNHF----NFGEMKDYRFALEDKIVIHKTNALVQELHQW 689
Query: 2155 YTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRW 2334
+Y+F ++ I F + L Y ++ KD LY + P R + Q + ++ + +
Sbjct: 690 LKQYNFLNCLKAINKFV-LWLSGWYFEIIKDTLYCDAKTNPNRVAKQAVLNYIFTQLIGF 748
Query: 2335 IAPILSFTADELW 2373
+ + TA++ W
Sbjct: 749 LNIFIPHTAEDAW 761
>gi|1351159|sp|P47587|SYI_MYCGE ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|1361704|pir||B64238
isoleucine--tRNA ligase (EC 6.1.1.5) - Mycoplasma
genitalium (SGC3) >gi|3844928 (U39716) isoleucyl-tRNA
synthetase (ileS) [Mycoplasma genitalium]
Length = 895
Score = 474 bits (1208), Expect = e-132
Identities = 294/926 (31%), Positives = 472/926 (50%), Gaps = 10/926 (1%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
D K TL +P T F M+ +L E + W+ + +L+ KG+ + +LHDGPPYANG
Sbjct: 2 DLKKTLLMPKTSFAMQANLSTSEKNFHDFWKDKKVFQKLKKQNKGKQIKILHDGPPYANG 61
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQF 369
IH+GHA+NKILKD I++S +G+D +IPGWDCHGLPIE A+ KK L V+
Sbjct: 62 SIHVGHALNKILKDFILRSWLYEGYDVVFIPGWDCHGLPIEHAVSKKNPSSYSNLSTVEK 121
Query: 370 RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGT 549
R+ C ++A QI +Q+ F+RLG++ D+ Y T+D F+ E+ + + KG + +
Sbjct: 122 RKLCHQFALSQIAVQKEQFQRLGLLNDFQNCYYTIDESFQFKELELFLQAIKKGLIFQDL 181
Query: 550 KPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWT 729
KP +W ++LAEAEIEY + S + + + L D + +WT
Sbjct: 182 KPTYWSPISRTSLAEAEIEYKEVNSIALYLTFKVSKSDFL----------DENANLLVWT 231
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWTLP + AI++ P DY+L E ++ Q+ + A L
Sbjct: 232 TTPWTLPTNQAIAIHPDFDYLLFE---YNQQKFVILEKLFEVFTNKLNWTNAIKL--KKF 286
Query: 910 KGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
KG+ ++ +H FY ++ +P+L+G HV +GTG VH++P G +D + Q+ +
Sbjct: 287 KGSNLKNSSYSHCFY-NKVLPVLMGIHVVDNEGTGIVHSSPAFGIDDFYLCQKNKIKE-- 343
Query: 1090 SAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH 1269
L +D +GV+ ++ L KAN LI++ + H PH
Sbjct: 344 ---VLISIDEKGVF---NNLLNDKELENCFYLKANDLIINRLKQNNSFIFSEVISHREPH 397
Query: 1270 CWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTIS 1449
WR KTP+++RA+ Q FI + +++ K I V + Q R+ M+ R +W IS
Sbjct: 398 DWRSKTPVIYRASKQLFIKTK--SIKKQLKKQINQVNFLNSKNQLRLKEMLLQRDEWCIS 455
Query: 1450 RQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQ-- 1623
RQR WG+PIP+ + + ++ ++++ G+D W+ D T L + +
Sbjct: 456 RQRVWGLPIPIVYANNKPL---LDFSTIQYTIKQLKKHGIDSWFEKDVTCFLKPDKTKKW 512
Query: 1624 --YEKITDILDVWFDSGITHEAVLLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNA 1797
Y K D LDVWFDSG ++ + + + ADLY+EG+DQ+RGWF SS G+ ++
Sbjct: 513 VKYHKEIDTLDVWFDSGSSYNVLEINK-YGSIADLYIEGSDQYRGWFNSSSNCGIIQNDL 571
Query: 1798 APYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQE 1977
P+K ++HGFT+D++G KMSKSLGN ++P I GADILRLW+A+TD+ + +
Sbjct: 572 IPFKSLVSHGFTLDENGNKMSKSLGNIVDPLKICDQYGADILRLWVANTDWQIDNKIGVN 631
Query: 1978 ILKRTTDAYRRIRNT-ARFLLGNLHGFDPTL---HLVPLSDMIALDRWIVHRAFELQQTI 2145
ILK+ + YRRIRN+ RF+LGN++GF+ T + L D I ++H+ L + I
Sbjct: 632 ILKQVAEQYRRIRNSLLRFILGNINGFNFTSMDDYKFSLEDKI-----VIHKTNSLVEQI 686
Query: 2146 KAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAF 2325
+ +Y+F ++ I F + L S Y ++ KD LY ++ P R + Q + ++
Sbjct: 687 EKFLEKYNFLGCLKVINKFV-LWLSSWYFEIIKDTLYCDAKNNPNRLAKQAVLNYIFTQL 745
Query: 2326 VRWIAPILSFTADELW-SYLPGDHADNV-LFTTWYDGXXXXXXXXXXXXXDFDKLLTLRD 2499
+ ++ + TA++ W +Y +V LFT + ++++
Sbjct: 746 ISFLNIFIPHTAEDAWKNYSFNKKPISVNLFT---KPTVFKVANSKNLGNIYKTFTSIKN 802
Query: 2500 HVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTVTPANTDG 2679
K +E +R G+I + L + L V +T +
Sbjct: 803 AAFKEIEKLRKEGLISKNNQIELTVGINKKIPKK---LKDNLALWLNVNSVNLTNNENE- 858
Query: 2680 FFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRC 2787
+ + T K C RCW+++ I H LC RC
Sbjct: 859 --IKVKKTKKTMCERCWNFQTIIKQKLDH-NLCSRC 891
>gi|5701963|emb|CAB52155.1| (AL109736) isoleucyl-trna synthetase
[Schizosaccharomyces pombe]
Length = 973
Score = 456 bits (1161), Expect = e-127
Identities = 304/925 (32%), Positives = 472/925 (50%), Gaps = 64/925 (6%)
Frame = +1
Query: 13 YKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQ 192
Y +L LP T FP++ ++ + D Y + + F+L DGPP+ANG+
Sbjct: 34 YSESLCLPKTSFPIKPNVKGNNEKYFKSIT-SDLYEWQKENLNKEDSFVLLDGPPFANGR 92
Query: 193 IHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFR 372
+H+GHA+NKILKDII + + L G Y+PGWDCHGLPIE K + +++ R
Sbjct: 93 LHIGHALNKILKDIINRWQLLKGRSVHYVPGWDCHGLPIESKAIKANAE---RKSSLEIR 149
Query: 373 QKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTK 552
+ +++A +Q Q F+R+ ++GDW + Y T+ +FE E++ ++ K + R K
Sbjct: 150 KIAKDFANSAVQEQLMMFQRMAVMGDWPSRYITMSDKFEIAELKVFLSLLQKDLIFRQNK 209
Query: 553 PVHWCFDCGSALAEAEIEYTDK-TSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWT 729
PV+W SALAE+EIEY D S + +P S +N + +WT
Sbjct: 210 PVYWSSSSRSALAESEIEYDDNHVSTSIYFTFPVNSFSIDGCEYN-------NVKALVWT 262
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLI---- 897
TTPWT+P++LA+S P ++Y L + H+ Y +++ L+
Sbjct: 263 TTPWTIPSNLALSYHPEINYGLYQ---HNNSI----------------YLMSDNLVPNLD 303
Query: 898 --HGSAKGAAMEQHILA-----HPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQ 1056
G+ + A+ I++ +P P ++ P L N+V+ + GTG VH APGHG ED+
Sbjct: 304 FMQGAKRLASCPSDIISSFTYENPLLPKQSFPFLQSNYVTNDIGTGIVHVAPGHGMEDYL 363
Query: 1057 VFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIW-KANPLIVDXXXXXXXX 1233
+ GL N+ +P+D G Y T + +L GL + ++
Sbjct: 364 L----GLENNLRP--FSPLDDYGRY---TKEALDGSLEGLEVLGDGGKKVISIMKNQNMI 414
Query: 1234 XXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARIL 1413
H YP+ WR P++ RATPQWFIS+E R A+KA+ V P +AR+L
Sbjct: 415 VKVSPYKHRYPYDWRTHKPLILRATPQWFISLENE--RKTAIKALDSVKMIPPNSRARLL 472
Query: 1414 SMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQ 1593
+ RP+W ISRQR WG+PIP+ + + P + + + +++E +GVD W++
Sbjct: 473 GFLNGRPEWCISRQRAWGLPIPVLYEKGTKIPL-LTVKSVSYIIEKMEVEGVDSWFN--D 529
Query: 1594 TELLGTEA--------DQYEKITDILDVWFDSGITHEAVLLERGLPKPADLYLEGADQHR 1749
TE G +Y + T+ LDVWFDSG + + + P DL LEG+DQHR
Sbjct: 530 TENNGHAQWVHPDYRNKEYIRGTETLDVWFDSGTSWTTIAPRKNKPL-IDLCLEGSDQHR 588
Query: 1750 GWFQSSLLTGVAMDNA--APYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIK------- 1902
GWFQS LLT A + AP+ THGF D+ G+K SKSLGN +P+D+I
Sbjct: 589 GWFQSLLLTYTAYQSKPEAPFSTLFTHGFIFDERGQKQSKSLGNVTDPEDVINGKLLKGK 648
Query: 1903 --TLGADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLV 2076
G D+LRLW+AS D +N+ +L IL + ++ ++ R T+RF LGNLH ++ T V
Sbjct: 649 KLPYGVDLLRLWVASCDSTNDTNLGPNILTQVGESLKKWRLTSRFCLGNLHDWN-TSSSV 707
Query: 2077 PLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLY 2256
+ ++ +D+ + + + Q I+ Y Y ++V + F + L S Y D KDRLY
Sbjct: 708 DVGELRGIDKLALVQLDKFQTEIRELYESYSINKVVHHLNYFMNSFLSSTYFDAVKDRLY 767
Query: 2257 TMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXX 2436
++ RRS QT +YH + I+PI A E+W LP + ++ T ++ G
Sbjct: 768 ADLPNSVSRRSVQTVLYHSLLTLIWAISPITPLLAQEIWQSLPDSYLNSSYQTPFHAGET 827
Query: 2437 XXXXXXXXXXXDFDKLLTLRDH---------VTKVLEPMRANGVIGXXXXXXXXXXXXXX 2589
D+ ++++ + ++ R N I
Sbjct: 828 HLISSLRSKVDLLDRKFLIKEYLVLQQLKYSINLLITAARENLTIKNSLEAYVVIKSKSQ 887
Query: 2590 XXXRW-QPLTEELRFLFISGDVTVTP---------------------ANTDGFFVSAQPT 2703
+ + + +L FLF + V + AN FF + Q
Sbjct: 888 SLLSFLKNYSSDLPFLFNTSKVFINEIPENLKLASVTQPEVQLDYGVANISLFFSNQQ-- 945
Query: 2704 TKAKCARCWHYRADIGAHPTHPE-LCGRC 2787
KC RCW H H + LC RC
Sbjct: 946 ---KCLRCW-------MHTAHEDGLCDRC 964
>gi|6325217|ref|NP_015285.1|ISM1| nuclear encoded mitochondrial
isoleucyl-tRNA synthetase; Ism1p
>gi|1711634|sp|P48526|SYIM_YEAST ISOLEUCYL-TRNA
SYNTHETASE, MITOCHONDRIAL (ISOLEUCINE--TRNA LIGASE)
(ILERS) >gi|2132320|pir||S62035 isoleucine--tRNA ligase
(EC 6.1.1.5), mitochondrial - yeast (Saccharomyces
cerevisiae) >gi|1171418 (U44030) Ism1p: mitochondrial
isoleucyl-tRNA synthetase [Saccharomyces cerevisiae]
Length = 1002
Score = 450 bits (1146), Expect = e-125
Identities = 280/791 (35%), Positives = 449/791 (56%), Gaps = 59/791 (7%)
Frame = +1
Query: 13 YKTTLHLPATDFPMRGDL--------PKREPAILERWERDDF--YAQLRAHAKG-----R 147
Y+ TL+LP T FP R +L PK + + RD F +++L +
Sbjct: 25 YQKTLNLPKTKFPNRSNLEITLRELIPKSSQLVYKEQLRDFFEEFSKLNTTDEKLEFIKE 84
Query: 148 PLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK 327
LF+LHDGPPYANG++HLGHA+NKILKDII + + G Y PGWDCHGLPIEI K
Sbjct: 85 KLFILHDGPPYANGELHLGHALNKILKDIINRYQLSQGKYIFYKPGWDCHGLPIEIKALK 144
Query: 328 KYGKVGV-TLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIR 504
+ ++ ++ R ++A + I+ QR F+ I+ DW+ PY T+D +E +++
Sbjct: 145 DLSAQQIESISPLKIRSMALKHAQKAIKRQRETFQHFAILTDWETPYLTMDKDYEINQLN 204
Query: 505 ALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVD-VAYPALDPSALAAVF 681
++ ++G + R KPV+W + +ALAE E+EY + + V +P S +
Sbjct: 205 IFKEMYERGLIKRQNKPVYWGTETRTALAEGELEYNENHKSIAAYVKFPLEKKSQMDLCK 264
Query: 682 NATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXX 861
+ ++ + IWT+TPWTL ++ AI Y L+ R
Sbjct: 265 KLGITNNLPIYCLIWTSTPWTLLSNRAICFNQDFSYSLL---------RLNSELILVETG 315
Query: 862 XXXRYGIAE------LLIHGSAKGAAMEQHILAHPFYPDRT-IPLLLGNHVSAEDGTGAV 1020
+ G+ G+ Q++L D+ PLL G HV++ GTG V
Sbjct: 316 SIDKLGLTTNSFETIKQFQGTHLNGLYYQNLLVD----DKVGRPLLHGAHVTSGTGTGLV 371
Query: 1021 HTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLA--------GL 1176
HTAPGHGQ+D+ + Q GL + +PVD +G Y P S ++ G
Sbjct: 372 HTAPGHGQDDYLIGIQNGLEIY------SPVDHQGRYQLNELPQSVRSIVRDEGDLTKGR 425
Query: 1177 HIWKANP--LIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRS 1350
+ A +I+ E HSYP+ WR K P++ RATPQWF + +++
Sbjct: 426 QVLDAETAKIILCKLSDLNLLYKSHEYTHSYPYDWRSKKPVIIRATPQWFADLHD--VKN 483
Query: 1351 AALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAAL 1530
AL++I+ V + P+ G +R+ S +++R +W ISRQR+WG+PI F + ++ +
Sbjct: 484 LALESISRVKFCPKRGYSRLSSFMKSRNEWCISRQRSWGIPILSFYKKSEPDSVLMNSEI 543
Query: 1531 MRQVADRVEQQGVDIWYS---LDQTELLGTE----ADQYEKITDILDVWFDSGIT----- 1674
+ ++++Q+G++ W++ D E L + A +Y + D +DVWFDSG +
Sbjct: 544 LAHAIEKIKQKGINAWFNDKDNDMKEWLPEKYHDVAHEYCRSQDTMDVWFDSGSSWSVIK 603
Query: 1675 --HEAVLLERGLPKPA-DLYLEGADQHRGWFQSSLLTGVAMDNA--APYKQCLTHGFTVD 1839
+E L LP P + LEG+DQHRGWFQSSLLT VA N APY++ +THGFT+D
Sbjct: 604 DFYEKSLKLSKLPSPLYQVCLEGSDQHRGWFQSSLLTKVASSNVPVAPYEEVITHGFTLD 663
Query: 1840 QHGRKMSKSLGNGIEPQDIIK--------TLGADILRLWIASTDYSNEMSLSQEILKRTT 1995
++G KMSKS+GN I P+ II+ LG D LR IA ++++ ++ ++K
Sbjct: 664 ENGLKMSKSVGNTISPEAIIRGDENLGLPALGVDGLRYLIAQSNFTTDIVAGPTVMKHVG 723
Query: 1996 DAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFA 2175
+A +++R T R+LL NL +L+P+ + +D++ +++ EL +T + Y +Y+F+
Sbjct: 724 EALKKVRLTFRYLLSNLQK-SQDFNLLPIEQLRRVDQYTLYKINELLETTREHYQKYNFS 782
Query: 2176 EIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSF 2355
+++ T+ + +L + Y D++KD LY+ + + RR QT + H+ A+ +APIL
Sbjct: 783 KVLITLQYHLNNELSAFYFDISKDILYSNQISSLARRQVQTTLVHILNAYRAILAPILPV 842
Query: 2356 TADELWSYLP 2385
E+W Y+P
Sbjct: 843 MVQEVWKYIP 852
>gi|625184 (L38957) mitochondrial isoleucyl-tRNA synthetase
[Saccharomyces cerevisiae]
Length = 1002
Score = 444 bits (1130), Expect = e-123
Identities = 278/791 (35%), Positives = 446/791 (56%), Gaps = 59/791 (7%)
Frame = +1
Query: 13 YKTTLHLPATDFPMRGDL--------PKREPAILERWERDDF--YAQLRAHAKG-----R 147
Y+ TL+LP T FP R +L PK + + RD F +++L +
Sbjct: 25 YQKTLNLPKTKFPNRSNLEITLRELIPKSSQLVYKEQLRDFFEEFSKLNTTDEKLEFIKE 84
Query: 148 PLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK 327
LF+LHDGPPYANG++HLGHA+NKILKDII + + G Y PGWDCHGLPIEI K
Sbjct: 85 KLFILHDGPPYANGELHLGHALNKILKDIINRYQLSQGKYIFYKPGWDCHGLPIEIKALK 144
Query: 328 KYGKVGV-TLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIR 504
+ ++ ++ R ++A + I+ QR F+ I+ DW+ PY T+D +E +++
Sbjct: 145 DLSAQQIESISPLKIRSMALKHAQKAIKRQRETFQHFAILTDWETPYLTMDKDYEINQLN 204
Query: 505 ALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVD-VAYPALDPSALAAVF 681
++ ++G + R KPV+W + +ALAE E+EY + + V +P S +
Sbjct: 205 IFKEMYERGLIKRQNKPVYWGTETRTALAEGELEYNENHKSIAAYVKFPLEKKSQMDLCK 264
Query: 682 NATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXX 861
+ ++ + IWT+TPWTL ++ AI Y L+ R
Sbjct: 265 KLGITNNLPIYCLIWTSTPWTLLSNRAICFNQDFSYSLL---------RLNSELILVETG 315
Query: 862 XXXRYGIAE------LLIHGSAKGAAMEQHILAHPFYPDRT-IPLLLGNHVSAEDGTGAV 1020
+ G+ G+ Q++L D+ PLL G HV++ GTG V
Sbjct: 316 SIDKLGLTTNSFETIKQFQGTHLNGLYYQNLLVD----DKVGRPLLHGAHVTSGTGTGLV 371
Query: 1021 HTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLA--------GL 1176
HTAPGHGQ+D+ + Q GL + +PVD +G Y P S ++ G
Sbjct: 372 HTAPGHGQDDYLIGIQNGLEIY------SPVDHQGRYQLNELPQSVRSIVRDEGDLTKGR 425
Query: 1177 HIWKANP--LIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRS 1350
+ A +I E HSYP+ WR K P++ RATPQWF + +++
Sbjct: 426 QVLDAETAKIIPCKLSDLNLLYKSHEYTHSYPYDWRSKKPVIIRATPQWFADLHD--VKN 483
Query: 1351 AALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAAL 1530
AL++I+ V + P+ G +R+ S +++R +W ISRQR+WG+PI F + ++ +
Sbjct: 484 LALESISRVKFCPKRGYSRLSSFMKSRNEWCISRQRSWGIPILSFYKKSEPDSVLMNSEI 543
Query: 1531 MRQVADRVEQQGVDIWYS---LDQTELLGTE----ADQYEKITDILDVWFDSGIT----- 1674
+ ++++Q+G++ W++ D E L + A +Y + D +DVWFDSG +
Sbjct: 544 LAHAIEKIKQKGINAWFNDKDNDMKEWLPEKYHDVAHEYCRSQDTMDVWFDSGSSWSVIK 603
Query: 1675 --HEAVLLERGLPKPA-DLYLEGADQHRGWFQSSLLTGVAMDNA--APYKQCLTHGFTVD 1839
+E L LP P + LEG+DQHRGWFQSSLLT VA N APY++ +THGFT+D
Sbjct: 604 DFYEKSLKLSKLPSPLYQVCLEGSDQHRGWFQSSLLTKVASSNVPVAPYEEVITHGFTLD 663
Query: 1840 QHGRKMSKSLGNGIEPQDIIK--------TLGADILRLWIASTDYSNEMSLSQEILKRTT 1995
++G KMSK +GN I P+ II+ LG D LR IA ++++ ++ ++K
Sbjct: 664 ENGLKMSKLVGNTISPEAIIRGDENLGLPALGVDGLRYLIAQSNFTTDIVAGPTVMKHVG 723
Query: 1996 DAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFA 2175
+A +++R T R+LL NL +L+P+ + +D++ +++ EL +T + Y +Y+F+
Sbjct: 724 EALKKVRLTFRYLLSNLQK-SQDFNLLPIEQLRRVDQYTLYKINELLETTREHYQKYNFS 782
Query: 2176 EIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSF 2355
+++ T+ + +L + Y D++K LY+ + + RR QT + H+ A+ +APIL
Sbjct: 783 KVLITLQYHLNNELSAFYFDISKGILYSNQISSLARRQVQTTLVHILNAYRAILAPILPV 842
Query: 2356 TADELWSYLP 2385
E+W Y+P
Sbjct: 843 MVQEVWKYIP 852
>gi|3334357|sp|O27428|SYI_METTH ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|2622484 (AE000900)
isoleucyl-tRNA synthetase [Methanobacterium
thermoautotrophicum]
Length = 1044
Score = 398 bits (1011), Expect = e-109
Identities = 262/769 (34%), Positives = 390/769 (50%), Gaps = 38/769 (4%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E + WE D Y +++ + RP + DGPPY +G+IHLG A NKI+KD ++ K +
Sbjct: 16 EEKVQSFWEERDIYERVKELREDRPRYSFLDGPPYCSGRIHLGTAWNKIMKDTYLRFKSM 75
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKYG---------KVGVTLDAVQFRQKCREYAAEQIQ 408
GF+ PGWD HGLPIE +E G K+G+ +F KCRE+A E
Sbjct: 76 KGFNVRRQPGWDTHGLPIEHKVEGLLGVRSKKDIEDKIGIE----EFVNKCREFAVENKA 131
Query: 409 LQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSAL 588
+ F+RLG+ DWD PY T D + L + +K L+R + + WC C +AL
Sbjct: 132 VMTGQFQRLGVWMDWDDPYVTFDPAYMESCWWTLKRAHEKDLLVRDLRVITWCPRCETAL 191
Query: 589 AEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAIS 768
A AEI+Y DK P + V +P + + +WTTTPWTLPA++A++
Sbjct: 192 ALAEIDYHDKEDPSIYVKFPVSGDTHIL----------------VWTTTPWTLPANMAVA 235
Query: 769 VGPTLDYVL--VEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILA 942
V P +Y ++G T+ + E I KG +E
Sbjct: 236 VHPDFEYAYARLDGETY-----------IMAEALVEKVLGEEAEILKRVKGTELEGLTYR 284
Query: 943 HPFYPDRTIPL--------LLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAA 1098
HP D +PL +LG+HV+ +GTG VHTAPGHG ED ++ ++YGL
Sbjct: 285 HPL--DDEVPLHREIEHRVILGDHVTLTEGTGCVHTAPGHGPEDFEIGKKYGL------E 336
Query: 1099 ELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWR 1278
+ PVD G++ +S G + A+ I+ + H Y CWR
Sbjct: 337 VICPVDEAGIFTEEAGKYS-----GRFVKDADEDIIADLRSKGLLLKAGTISHRYGFCWR 391
Query: 1279 HKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQ 1455
KTPI++ AT QWF+ + + ++ L+ + V W P W G++R + IEN DWTISRQ
Sbjct: 392 CKTPIIYLATEQWFLKITE--IKDKMLRELDRVQWVPSWAGESRFRNWIENARDWTISRQ 449
Query: 1456 RTWGVPIPLFVHRHSGAPHP-RSAALMRQVADRVEQQGVDIWYS-LDQTEL-LGTEADQY 1626
R WG+PIP+++ + H S +R++A E +G I +D+ L G +
Sbjct: 450 RYWGIPIPIWICEECDSIHVVGSIDELRELAVEGELEGDFIHRPHVDRIVLECGECGGRM 509
Query: 1627 EKITDILDVWFDSGITHEAVL---LERGLPK---PADLYLEGADQHRGWFQSSLLTGVAM 1788
++ D+LDVW DSG+ A L E L + P D EG DQ RGWF S L GV
Sbjct: 510 KRTPDVLDVWIDSGVAGWAALHYPSETELFREWFPYDFITEGHDQTRGWFYSQLGCGVIA 569
Query: 1789 DNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSL 1968
+ PY++ L HGFT+D+ GRKMSKSLGN +EP+D+I+ GAD+LR ++ + N+
Sbjct: 570 LDEVPYRRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIEKYGADVLRFYLL---WENK--- 623
Query: 1969 SQEILKRTTDAYRRIRNTARFLLG---------NLHGFDPTLHLVPLSDMIALDRWIVHR 2121
E LK D R + L +L F P H DRWI+ R
Sbjct: 624 PWEDLKFVWDELRNVNKMFNILWNVYVFATTYMSLDRFQPGDHSAEDLSFRDEDRWILSR 683
Query: 2122 AFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTA 2301
+ + A F + I +F DL Y+ + + R + R+D P + +A
Sbjct: 684 INSVALKVTEAIENLHFHRATREIHDFIVEDLSRWYIRLIRSRTWIERDD-PDKLAAYHT 742
Query: 2302 MYHLTAAFVRWIAPILSFTADELWSYL 2382
+Y + + ++P+ ++++ L
Sbjct: 743 LYTVLKTLIVTLSPMAPHVCEDIYQNL 769
>gi|135128|sp|P26499|SYI_METTM ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
Length = 1046
Score = 398 bits (1011), Expect = e-109
Identities = 257/769 (33%), Positives = 386/769 (49%), Gaps = 30/769 (3%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E + WE D Y +++ + P + DGPPY +G+IHLG A NKI+KD ++ K +
Sbjct: 17 EEKVQSFWEERDIYERVKELREEGPRYSFLDGPPYCSGRIHLGTAWNKIMKDSYLRFKSM 76
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKYG---------KVGVTLDAVQFRQKCREYAAEQIQ 408
GF+ PGWD HGLPIE +E G K+G+ +F +KCRE+A E
Sbjct: 77 RGFNVRRQPGWDTHGLPIEHKVEGILGVRSKKDIEDKIGIE----EFVRKCREFAMENKA 132
Query: 409 LQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSAL 588
+ F+RLG+ DWD PY T D + L + +K L+R + + WC C +AL
Sbjct: 133 VMTSQFQRLGVWMDWDDPYVTFDPAYMESCWWTLKRAHEKDLLLRDLRVITWCPRCETAL 192
Query: 589 AEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAIS 768
A AEI+Y +K P + V +P + + +WTTTPWTLPA++A++
Sbjct: 193 ALAEIDYHEKEDPSIYVKFPVSGDTYIL----------------VWTTTPWTLPANMAVA 236
Query: 769 VGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHP 948
V P DY R + E I + +G+ +E HP
Sbjct: 237 VHPDFDYA---------HTRLDGETYIMAEALVEKVLGEEAEIIKTVRGSELEGLTYRHP 287
Query: 949 FYPDRTIP--------LLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAEL 1104
D +P ++LG+HV+ +GTG VHTAPGHG ED ++ ++YGL
Sbjct: 288 L--DEEVPCHRDMEHRVILGDHVTLTEGTGCVHTAPGHGPEDFEIGKEYGL------PVF 339
Query: 1105 NPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHK 1284
PVD GV+ + GL + A+ I+D + H Y CWR K
Sbjct: 340 CPVDEAGVFTEDAGKYR-----GLFVKDADSDIIDDLRSKNLLLRAETISHRYGFCWRCK 394
Query: 1285 TPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQRT 1461
TPI++ AT QWF+ + + ++ L + V W P W G++R + IEN DWTISRQR
Sbjct: 395 TPIIYLATEQWFLKITE--IKDKMLSELDRVQWIPSWAGESRFRNWIENARDWTISRQRY 452
Query: 1462 WGVPIPLFVHRHSGAPHP-RSAALMRQVADRVEQQGVDIWYSLDQTELL--GTEADQYEK 1632
WG+PIP++V + H S +R++A + +G I +L G + ++
Sbjct: 453 WGIPIPIWVCEDCDSIHVVGSIGELRELAVEGQLEGDFIHRPHVDRIILECGRCGGRMKR 512
Query: 1633 ITDILDVWFDSGITHEAVL---LERGLPK---PADLYLEGADQHRGWFQSSLLTGVAMDN 1794
D+LDVW DSG+ A L E+ L P D EG DQ RGWF S L GV +
Sbjct: 513 TPDVLDVWIDSGVAGWAALHYPREKELFSEWFPYDFITEGHDQTRGWFYSQLGCGVIALD 572
Query: 1795 AAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYS-NEMSLS 1971
PY++ L HGFT+D+ GRKMSKSLGN +EP+D+I+ GAD+LR ++ + ++
Sbjct: 573 ETPYRRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIEKYGADVLRFYLLWANKPWEDLKFV 632
Query: 1972 QEILKRTTDAYRRIRNTARFLLG--NLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTI 2145
+ LK + + N F +L F P H + DRWI+ R + +
Sbjct: 633 WDELKNVNKMFNILWNVYVFATTYMSLDRFQPGDHELEDLHFRDEDRWIISRVNSVALKV 692
Query: 2146 KAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAF 2325
A F + I +F DL Y+ + + R + R+D P + +A ++Y
Sbjct: 693 TEALDNLHFHRATREIHDFIVEDLSRWYIRLIRSRTWIERDD-PDKLAAYHSLYTALKTL 751
Query: 2326 VRWIAPILSFTADELWSYL 2382
+ ++PI ++++ L
Sbjct: 752 IVTLSPIAPHVCEDIYQNL 770
>gi|68525|pir||SYEXI isoleucine--tRNA ligase (EC 6.1.1.5) -
Methanobacterium thermoautotrophicum >gi|149728 (M59245)
transfer RNA-Ile synthetase [Methanobacterium
thermoautotrophicum]
Length = 1045
Score = 398 bits (1011), Expect = e-109
Identities = 257/769 (33%), Positives = 386/769 (49%), Gaps = 30/769 (3%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E + WE D Y +++ + P + DGPPY +G+IHLG A NKI+KD ++ K +
Sbjct: 16 EEKVQSFWEERDIYERVKELREEGPRYSFLDGPPYCSGRIHLGTAWNKIMKDSYLRFKSM 75
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKYG---------KVGVTLDAVQFRQKCREYAAEQIQ 408
GF+ PGWD HGLPIE +E G K+G+ +F +KCRE+A E
Sbjct: 76 RGFNVRRQPGWDTHGLPIEHKVEGILGVRSKKDIEDKIGIE----EFVRKCREFAMENKA 131
Query: 409 LQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSAL 588
+ F+RLG+ DWD PY T D + L + +K L+R + + WC C +AL
Sbjct: 132 VMTSQFQRLGVWMDWDDPYVTFDPAYMESCWWTLKRAHEKDLLLRDLRVITWCPRCETAL 191
Query: 589 AEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAIS 768
A AEI+Y +K P + V +P + + +WTTTPWTLPA++A++
Sbjct: 192 ALAEIDYHEKEDPSIYVKFPVSGDTYIL----------------VWTTTPWTLPANMAVA 235
Query: 769 VGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHP 948
V P DY R + E I + +G+ +E HP
Sbjct: 236 VHPDFDYA---------HTRLDGETYIMAEALVEKVLGEEAEIIKTVRGSELEGLTYRHP 286
Query: 949 FYPDRTIP--------LLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAEL 1104
D +P ++LG+HV+ +GTG VHTAPGHG ED ++ ++YGL
Sbjct: 287 L--DEEVPCHRDMEHRVILGDHVTLTEGTGCVHTAPGHGPEDFEIGKEYGL------PVF 338
Query: 1105 NPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHK 1284
PVD GV+ + GL + A+ I+D + H Y CWR K
Sbjct: 339 CPVDEAGVFTEDAGKYR-----GLFVKDADSDIIDDLRSKNLLLRAETISHRYGFCWRCK 393
Query: 1285 TPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQRT 1461
TPI++ AT QWF+ + + ++ L + V W P W G++R + IEN DWTISRQR
Sbjct: 394 TPIIYLATEQWFLKITE--IKDKMLSELDRVQWIPSWAGESRFRNWIENARDWTISRQRY 451
Query: 1462 WGVPIPLFVHRHSGAPHP-RSAALMRQVADRVEQQGVDIWYSLDQTELL--GTEADQYEK 1632
WG+PIP++V + H S +R++A + +G I +L G + ++
Sbjct: 452 WGIPIPIWVCEDCDSIHVVGSIGELRELAVEGQLEGDFIHRPHVDRIILECGRCGGRMKR 511
Query: 1633 ITDILDVWFDSGITHEAVL---LERGLPK---PADLYLEGADQHRGWFQSSLLTGVAMDN 1794
D+LDVW DSG+ A L E+ L P D EG DQ RGWF S L GV +
Sbjct: 512 TPDVLDVWIDSGVAGWAALHYPREKELFSEWFPYDFITEGHDQTRGWFYSQLGCGVIALD 571
Query: 1795 AAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYS-NEMSLS 1971
PY++ L HGFT+D+ GRKMSKSLGN +EP+D+I+ GAD+LR ++ + ++
Sbjct: 572 ETPYRRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIEKYGADVLRFYLLWANKPWEDLKFV 631
Query: 1972 QEILKRTTDAYRRIRNTARFLLG--NLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTI 2145
+ LK + + N F +L F P H + DRWI+ R + +
Sbjct: 632 WDELKNVNKMFNILWNVYVFATTYMSLDRFQPGDHELEDLHFRDEDRWIISRVNSVALKV 691
Query: 2146 KAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAF 2325
A F + I +F DL Y+ + + R + R+D P + +A ++Y
Sbjct: 692 TEALDNLHFHRATREIHDFIVEDLSRWYIRLIRSRTWIERDD-PDKLAAYHSLYTALKTL 750
Query: 2326 VRWIAPILSFTADELWSYL 2382
+ ++PI ++++ L
Sbjct: 751 IVTLSPIAPHVCEDIYQNL 769
>gi|3874441|emb|CAB02766.1| (Z81038) predicted using Genefinder;
Similarity to Yeast isoleucyl-tRNA synthetase
(SW:P48526); cDNA EST yk351e10.5 comes from this gene;
cDNA EST yk408e2.3 comes from this gene; cDNA EST
yk408e2.5 comes from this gene [Caeno...
Length = 1131
Score = 391 bits (994), Expect = e-107
Identities = 254/768 (33%), Positives = 385/768 (50%), Gaps = 30/768 (3%)
Frame = +1
Query: 106 DDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPG 285
+D Y+ +A K +F L DGPPYANG+ H GHA+NKILKD ++KS+ G+ + PG
Sbjct: 161 NDLYSWQKAARKDSEIFELLDGPPYANGEAHTGHAINKILKDFVVKSRIALGYRVLFRPG 220
Query: 286 WDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPY 465
WDCHGLPIE+ I K+ G G + ++ R R A E I Q F+R G+ DW+ PY
Sbjct: 221 WDCHGLPIELKIGKQQGNAG-SRTPLETRAAARIVADEAIGKQMNAFRRWGVTADWEKPY 279
Query: 466 KTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDK-TSPMVDVA 642
T + A ++ AK+V++ + R KPV+W +ALAE+E+EY DK S
Sbjct: 280 VTKSPSYVAAQLDIFAKLVEQKLVYRSFKPVYWSPSSNTALAESELEYNDKHQSTSAYFR 339
Query: 643 YPALDPSALAAVFNATLPPDV-QLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTH-S 816
+ ++ S+ ++ + P + Q IWTTTPWTLP + AISV + Y L++ +
Sbjct: 340 FKLINFSSSDVIWAHSEPSKISQFFALIWTTTPWTLPLNNAISVSSAIQYSLIQFDNEIN 399
Query: 817 GQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVS 996
+ + + G+ K A + ++ + +P+ G HV+
Sbjct: 400 NPTSTFYVIASKLLEEFQKSSDRKCKVVGTVKPANLIGRRYKSCWHNELGLPIYEGPHVT 459
Query: 997 AEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGL 1176
GTG VHTA HG +D+ V G E + VD+RG Y T
Sbjct: 460 DTVGTGLVHTAFAHGFQDYDVAISKG-----DRVE-SFVDSRGCY----------TRHLG 503
Query: 1177 HIWKANPLIVDXXXXXXXXXXXXEMH-----HSYPHCWRHKTPIVFRATPQWFISMEQAA 1341
H ++ + +H HSYP+ WR K P++ R++ QWFI +++
Sbjct: 504 HDLDGKEVLGEGQKIALRLLNHDIVHVSKHVHSYPYDWRTKKPVIIRSSEQWFIDVDEIG 563
Query: 1342 LRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRS 1521
R++ + V +A + ++ R W ISRQR WG PIP V + G+ R
Sbjct: 564 KRASMMLDDISVAAGDSDLRASLKQLVTTRKSWCISRQRVWGTPIPALVDDNGGSYTSRK 623
Query: 1522 AALMRQVADRV-EQQGVDIWYSLDQTELLGTE------------ADQYEKITDILDVWFD 1662
L+ VA E++ D+W+ +D E+L E Q +K TDI+DVW D
Sbjct: 624 --LIEWVAKLTRERENTDVWWEIDVKEILENEEVRRSLEIPSDIVSQLKKNTDIMDVWLD 681
Query: 1663 SGIT-HEAVLLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVD 1839
SG+ H A + AD+ LEG DQ RGWFQS LLT VA+ N PYK+ + HGF +D
Sbjct: 682 SGLAWHAARDNDTEREHVADVVLEGVDQFRGWFQSLLLTSVAVQNKLPYKKIIVHGFCID 741
Query: 1840 QHGRKMSKSLGNGIEPQDII------KTLGADILRLWIA--STDYSNEMSLSQEILKRTT 1995
++ KMSKS+GN ++P + K +GAD LR W+A ++ + E + +I+
Sbjct: 742 ENNNKMSKSIGNVVDPTMLTDGSLKQKAIGADGLRFWVALSGSENAGESKIGMKIIDDVD 801
Query: 1996 DAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFA 2175
RN RF++G GFD PL LD ++ + + Y + F
Sbjct: 802 KKVIAFRNGFRFMIGGCQGFDGKQVKFPLK---TLDIDMLQNCDAIVKRSIVNYNDFKFR 858
Query: 2176 EIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSF 2355
+ + F + + Y+ +DRLY + + SAQ ++ L I+PIL
Sbjct: 859 TVANDLTQFLQRNFSANYVKYVRDRLYCDKVGSESHISAQFTLHRLAHNLAHIISPILPH 918
Query: 2356 TADELWSYLPGDHADNVL 2409
+ E+ +LPG H +L
Sbjct: 919 LSSEVLQHLPGSHEKQIL 936
>gi|3122898|sp|O29622|SYI_ARCFU ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|2649988 (AE001061)
isoleucyl-tRNA synthetase (ileS) [Archaeoglobus fulgidus]
Length = 1018
Score = 388 bits (986), Expect = e-106
Identities = 251/768 (32%), Positives = 377/768 (48%), Gaps = 20/768 (2%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E I + WE +D Y +++ KG F DGPPY G+IHLG A NK+LKD I++ K +
Sbjct: 12 ESEIFKFWEDNDIYRKVKE--KGGRKFYFVDGPPYTTGRIHLGTAWNKVLKDTILRYKRM 69
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKYG---KVGVTLDAV-QFRQKCREYAAEQIQLQRRD 423
GF PGWD HGLPIE+ +E++ G K + + +F ++C YA
Sbjct: 70 MGFAPTDTPGWDMHGLPIEVKVEQELGFRTKRDIESFGIDKFIERCMNYALANKDAMTEQ 129
Query: 424 FKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
FK L + DW+ PY T+ + A+ + ++G L R V+WC C +ALA+AE+
Sbjct: 130 FKSLAVWMDWENPYMTIKAEYMNAAWFAIKRAHERGLLERKKMVVNWCHRCETALADAEV 189
Query: 604 EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTL 783
EY D+ P + V +P + + + IWTTTPWTLPA++A++V P+L
Sbjct: 190 EYWDEEDPSIYVKFP--------------VKGEKDTYIVIWTTTPWTLPANMAVAVHPSL 235
Query: 784 DYVLVEGPTHSGQRRWXXXXXXXXXXXXXR-----YGIAELLIHGSAKGAAMEQHILAH- 945
+Y G+ + + + + E + +G E H LA
Sbjct: 236 EYAKFRA-VKDGKVEYLILAKELADSVLGKGDYDSWEVVETYLGEDLEGLEYE-HPLADE 293
Query: 946 -PFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDAR 1122
P + + + V+AE+ TG VH APGHG ED+++ + GL NPVD R
Sbjct: 294 VPLQKNWKHQVFFADFVTAEN-TGCVHIAPGHGVEDYELGVEKGL------EVFNPVDDR 346
Query: 1123 GVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFR 1302
GVY + AG H+ +AN I+D + H Y HCWR KTPI++R
Sbjct: 347 GVYTEEAGKY-----AGKHVKEANDDIIDDLYRKDLLLAEERIVHRYGHCWRCKTPIIYR 401
Query: 1303 ATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQRTWGVPIP 1479
AT QWFI + + L+ L+ I V W P+W G AR + N DW ISRQR WG+PIP
Sbjct: 402 ATEQWFIKISE--LKDEMLEEIDKVMWIPEWAGSARFKDWVSNAKDWCISRQRYWGIPIP 459
Query: 1480 LFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWY-SLDQTELLGTEADQYEKITDILDVW 1656
+++ G ++ + + + +D+ +D ++ D+ DVW
Sbjct: 460 VWICEKCG-----EMKVVGSINEIEWENDLDLHRPKIDAVTFSCQCGGVMRRVPDVFDVW 514
Query: 1657 FDSGITHEAVLLERGLPK-------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQC 1815
FDSG+ + L K PAD EG DQ RGWF S L T V + APYK
Sbjct: 515 FDSGVASWGSIAYP-LRKDKFEELWPADFITEGHDQTRGWFYSQLGTSVVCFDKAPYKAV 573
Query: 1816 LTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTT 1995
L HGFT+D+ GRKMSKSLGN +EP++++ +G D RL++ + ++ S E +
Sbjct: 574 LMHGFTLDEQGRKMSKSLGNVVEPEEVVGQIGVDGFRLYVLYSAPWEDLRFSWEEARNIN 633
Query: 1996 DAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFA 2175
+ N RF + + ++ DRWI+ R + A Y
Sbjct: 634 RMLNVVWNAVRF--AHTYMSLDNYSFGEKGELKIEDRWILSRLESFIKEANEAMEGYQVH 691
Query: 2176 EIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSF 2355
+V+ +F D Y+ + + R++ R D+P + +A M+ + +R IAP
Sbjct: 692 RVVRAFFDFFVEDFSRWYIQIIRPRVWEER-DSPSKLAAYYTMFRVIDRSLRAIAPFAPL 750
Query: 2356 TADELWSY 2379
A+ W Y
Sbjct: 751 IAE--WFY 756
>gi|598411 (L37104) transfer RNA-Ile synthetase [Thermotoga maritima]
Length = 505
Score = 384 bits (977), Expect = e-105
Identities = 207/527 (39%), Positives = 292/527 (55%), Gaps = 8/527 (1%)
Frame = +1
Query: 289 DCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYK 468
D HGLPIE + ++ G+ + + R+KC E+A + +QR +FKRLG+ GDW+ PY
Sbjct: 1 DTHGLPIEHRVSQELGEKIKEMSPAEIRKKCEEFALRFVDIQREEFKRLGVRGDWENPYI 60
Query: 469 TLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYP 648
TL +E + +V++G++ R KP++WC C +ALAEAEIEY D SP + V +
Sbjct: 61 TLKPDYEVKILDVFKTLVEQGNVYRSLKPIYWCPRCRTALAEAEIEYHDHKSPSIYVKFR 120
Query: 649 ALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRR 828
+ + D + IWTTTPWTLPA++ I++ P +Y +V+ G+ +
Sbjct: 121 SKE--------------DPNFFIVIWTTTPWTLPANVGIALHPDYEYSVVK----VGEEK 162
Query: 829 WXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDG 1008
W GI + KG +E HP + DRT ++L ++VS E G
Sbjct: 163 WVIATDLLDAFSKET-GIDCSNVVEKIKGKDLEGKEFVHPIFDDRTSRVILADYVSLETG 221
Query: 1009 TGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWK 1188
TG VH APGHG+ED+ YG + Y ++PVD G + + G+ I
Sbjct: 222 TGCVHIAPGHGEEDYI----YGHVQ-YGLPIVSPVDEEGRFTEEAGKYK-----GMFIED 271
Query: 1189 ANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAI 1368
AN +I++ + HSYPHCWR K P++FRAT QWFIS++ LR L+ I
Sbjct: 272 ANEVIIEDLKRKGILVHASSITHSYPHCWRCKGPVIFRATEQWFISVDHNNLRQKVLEEI 331
Query: 1369 THVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVAD 1548
V W P+WG+ RI SM+E RPDW ISRQR WG PIP + G ++
Sbjct: 332 DKVKWIPEWGRNRIRSMVEERPDWCISRQRVWGTPIPAVKCKECGEV-VLDPKVIEHFMK 390
Query: 1549 RVEQQGVDIWYSLDQTELLGTE-------ADQYEKITDILDVWFDSGITHEAVLLER-GL 1704
VE++G + W+ + EL+ + +EK+ D LDVW DSG + E + +R
Sbjct: 391 IVEKEGTNAWFEKEVEELIPEDFVCPKCGKRSFEKMLDTLDVWIDSGASFEYITTKREDH 450
Query: 1705 PKPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSL 1869
P P D+YLEG+DQHRGWF SS+ VA +APYK+ LTHGF D+ GRKMSKSL
Sbjct: 451 PFPLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKEVLTHGFIKDEQGRKMSKSL 505
>gi|2501012|sp|Q58357|SYI_METJA ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|2129087|pir||C64418
isoleucine--tRNA ligase (EC 6.1.1.5) - Methanococcus
jannaschii >gi|1591614 (U67538) isoleucyl-tRNA synthetase
(ileS) [Methanococcus jannaschii]
Length = 1039
Score = 384 bits (975), Expect = e-105
Identities = 248/772 (32%), Positives = 389/772 (50%), Gaps = 34/772 (4%)
Frame = +1
Query: 97 WERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPY 276
WE +D Y +++ + F DGPPY +G IHLG A NKI+KD ++ K + G++
Sbjct: 20 WEENDIYQKVKKKNERNKEFYFVDGPPYCSGAIHLGTAWNKIIKDTYLRFKRMQGYNVLD 79
Query: 277 IPGWDCHGLPIEIAIEKKYG-----KVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGI 441
GWD HGLPIE+ +E ++G ++ + QF +KC+E+A + ++ + FK LG+
Sbjct: 80 KAGWDMHGLPIEVKVENEFGIKNKKEIETKIGVKQFIEKCKEFALKHKEIMEKQFKNLGV 139
Query: 442 IGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI--EYTD 615
DW+ Y + + L +KG L R + V+WC C +ALAE E+ EY +
Sbjct: 140 WLDWENAYMPITKEYMEIGWWTLKVAHEKGLLTRDLRVVYWCPRCETALAEHEVRGEYKE 199
Query: 616 KTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVL 795
P V V + L + + IWTTTPWTL A+LA++V P DY
Sbjct: 200 VYDPSVYVKF--------------RLANEENTYIVIWTTTPWTLVANLAVTVHPDYDYAY 245
Query: 796 VEGPTHSGQRRWXXXXXXXXXXXXXR---YGIAELLIHGSAKGAAMEQHILAHPFYPDR- 963
VE + W + I I KG +E HP +
Sbjct: 246 VEVEFDDKKEVWIIAEKLVEEVINKAKKFHNIKNYKIIKKVKGKELEGIKYIHPLLEENE 305
Query: 964 ----------TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPV 1113
++LG HV+ E GTG VHTAPGHG+ED +V ++Y L + +P+
Sbjct: 306 RQKEFAELENAHTVILGEHVTLEGGTGLVHTAPGHGEEDFEVGKKYNLPIY------SPI 359
Query: 1114 DARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPI 1293
D G Y+ E G+ + A+ I++ ++ HSYPHCWR KTP+
Sbjct: 360 DDEGKYV-------EGKWKGVFVKDADAEIIETLKNKGLLVYAGKIKHSYPHCWRCKTPL 412
Query: 1294 VFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVP 1473
+FRAT QWF+ + + ++ ++ V W P W + R ++ ++ DW ISRQR WG+P
Sbjct: 413 LFRATEQWFLEISK--IKDNIIEHAKTVQWIPHWVETRYINGVKFVGDWNISRQRYWGIP 470
Query: 1474 IPLFVHRHSGAPHPRSAA--LMRQVADRVEQQGVDIWY--SLDQTELLGTEADQYEKITD 1641
IP++V G + L ++ ++ E ++ + ++D+ +L + +++ D
Sbjct: 471 IPVWVCEKCGKYIVVGSVEELEEKMINKDEVGEINDLHKPTVDKIKLRCECGGEMKRVPD 530
Query: 1642 ILDVWFDSGITHEAVLLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLT 1821
+LDVWFDSG+ A + + L K AD EG DQ WF S + N PYK+CL
Sbjct: 531 VLDVWFDSGLAPYASIGVKELKK-ADFITEGHDQVTKWFYSQHALSAIVFNDIPYKKCLM 589
Query: 1822 HGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIAST-----DYSNEMSLSQEILK 1986
HGFT+D+HG KMSKSLGN + P D+++ GAD+LR ++ S D S ++L
Sbjct: 590 HGFTLDEHGDKMSKSLGNVVNPDDVVEKYGADLLRFYLLSANKVWEDLRFVWSEMDDVLS 649
Query: 1987 RTTDAYRRIRNTARFLLGNLHGFDP-TLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTR 2163
+ +++ L F P + L D DRWIV R + K A
Sbjct: 650 LFNTLWNAYMFAVNYMV--LDNFKPDEKYFEYLKDE---DRWIVSR---INSVAKIAIEN 701
Query: 2164 YD---FAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRW 2334
+ F T+ +F DL Y+ + +DR + ++DA + QT +Y++
Sbjct: 702 LEVPYFHTYTWTLKDFILNDLSRWYIRLIRDRTWKEKDDADKLAAYQT-LYYVLLKLATI 760
Query: 2335 IAPILSFTADELWSYLPGDHADNVLF 2412
+AP+ TA+ ++ L + + +F
Sbjct: 761 LAPVAPHTAEAIYQNLKTEDMEESIF 786
>gi|6647822|sp|O58792|SYI_PYRHO ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|3257481|dbj|BAA30164| (AP000004) 1066aa long
hypothetical isoleucyl-tRNA synthetase [Pyrococcus
horikoshii]
Length = 1066
Score = 382 bits (970), Expect = e-105
Identities = 251/771 (32%), Positives = 398/771 (51%), Gaps = 65/771 (8%)
Frame = +1
Query: 70 KREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSK 249
K E I E W+ ++ Y +++ K P + DGPPY +G IHLG A NKI+KD+II+ +
Sbjct: 14 KLEEKIEEFWKENNIYQKIKELRKNGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMIIRFR 73
Query: 250 HLDGFDAPYIPGWDCHGLPIEIAIEKKYG-----KVGVTLDAVQFRQKCREYAAEQIQLQ 414
+ G++ PG+D HGLPIE+ +E+ G ++ + F +KC+E+A +++
Sbjct: 74 TMQGYNVWRQPGFDMHGLPIEVKVEQALGLKTKKEIEEKIGVENFIKKCKEFALNNLKIM 133
Query: 415 RRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAE 594
FK LGI DWD PY T+ + L K +KG L + + +HWC C +ALAE
Sbjct: 134 TEQFKMLGIWMDWDDPYMTIKNEYIESAWFTLKKAWEKGLLEKDKRVLHWCPRCETALAE 193
Query: 595 AEI--EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAIS 768
E+ EY + P + V +P + + IWTTTPWTLPA+LA+S
Sbjct: 194 HEVRGEYKLRKDPSIYVKFP--------------IEGKENEYLLIWTTTPWTLPANLAVS 239
Query: 769 VGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA----KGAAMEQ-- 930
P DYV V+ + + W + E+ + G KG +E
Sbjct: 240 AHPEYDYVKVKVEFNGKEEYWILAKALVDKV------LGEIGVKGEVIEEFKGRELEGLR 293
Query: 931 --HILAHPFYPDRTI--------PLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLL 1080
H+L + + ++L + V+ E+GTG VHTAPGHG+ED +V ++YGL
Sbjct: 294 YIHVLMDEYPRQKEFREKYEWAHRIILADFVTLEEGTGLVHTAPGHGEEDFEVGKKYGLP 353
Query: 1081 NHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHS 1260
+ +PVD +G Y+ E G+++ +A+P I++ E+ H
Sbjct: 354 IY------SPVDDQGRYV-------EGKWKGIYVKEADPQIIEHLKEKGYLVKAGEIEHK 400
Query: 1261 YPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDW 1440
YPHCWR KTP++FRAT QWF+ + + R + VTWYP W + R + + + DW
Sbjct: 401 YPHCWRCKTPLIFRATDQWFLKVSKVKDR-IIKENDEKVTWYPDWVKIRFDNGVRDSGDW 459
Query: 1441 TISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQG--VDIWYSLDQ-----TE 1599
ISRQR WG+P+P++ S + ++A +E G +D+ S ++ E
Sbjct: 460 VISRQRYWGIPLPIWQSEDGEIYVVGSWRELVELAVAIEVNGERIDLPESYEEKLKVIEE 519
Query: 1600 LLGTE---------------ADQYEKITDILDVWFDSGITHEAVLLERGLPK-------- 1710
LG E + ++ D++DVWFDSGI A L G P+
Sbjct: 520 KLGPEDLHRPYVDAFIIKVNGKEMRRVKDVVDVWFDSGIASWASL---GYPRNKELFEKL 576
Query: 1711 -PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEP 1887
PAD +EG DQ WF S V + PY++ HG+ +D+ G KMSKSLGN I P
Sbjct: 577 WPADFIVEGEDQVTKWFYSQQAASVIAFDTVPYRRVAMHGYVLDEKGDKMSKSLGNIIRP 636
Query: 1888 QDIIKTLGADILRLWI--ASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLG------- 2040
+++++ G D R ++ A+ + N LK + ++R L
Sbjct: 637 EEVVEKAGRDTFRFYMLWATNPWEN--------LKFSWKGVEQVRRMLNILWNVYVLSAT 688
Query: 2041 --NLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVD 2214
+L FDP V D+WI+ R L + ++ + + + + NF D
Sbjct: 689 YMSLDNFDPRNVKVEELAFREEDKWILSRVNSLIREVENGIETFYLTKATRALYNFVVED 748
Query: 2215 LGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
L Y+ + + RL+ +D P + +A ++ + +R +AP + +E++ L
Sbjct: 749 LSRWYVRLIRKRLWVEGDD-PDKLAAYYTLWKVFDVLLRLMAPFTPYITEEIYQNL 803
>gi|5458344|emb|CAB49833.1| (AJ248285) isoleucyl-tRNA synthetase
(ileS) [Pyrococcus abyssi]
Length = 1067
Score = 380 bits (965), Expect = e-104
Identities = 252/787 (32%), Positives = 403/787 (51%), Gaps = 68/787 (8%)
Frame = +1
Query: 61 DLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
D K E + + W ++ Y +++ K P + DGPPY +G IHLG A NKI+KD+II
Sbjct: 11 DPKKLEEKVEKFWSENEIYRKVKELRKDGPKYYFLDGPPYVSGAIHLGTAWNKIIKDMII 70
Query: 241 KSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG-----KVGVTLDAVQFRQKCREYAAEQI 405
+ + + G++ PG+D HGLPIE+ +E+ G ++ + F +KC+E+A +
Sbjct: 71 RFRTMQGYNVWRQPGYDMHGLPIEVKVEQALGLKTKKEIEEKIGVENFIKKCKEFALNNL 130
Query: 406 QLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSA 585
++ FK LGI DWD PY T+ + L + +KG L + + +HWC C +A
Sbjct: 131 KIMTEQFKMLGIWMDWDNPYMTIKNEYIESAWFTLKRAWEKGLLEKDKRVLHWCPRCETA 190
Query: 586 LAEAEI--EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASL 759
LAE E+ EY + P + V +P + + IWTTTPWTLPA+L
Sbjct: 191 LAEHEVRGEYKLRKDPSIYVKFP--------------VEGKENEYLLIWTTTPWTLPANL 236
Query: 760 AISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA----KGAAME 927
A+S P DYV V+ + + W + E+ + G KG +E
Sbjct: 237 AVSAHPDYDYVKVKVEFNGREEYWILAKALVDKV------LGEIGVKGEVVEEFKGRELE 290
Query: 928 ----QHILAHPFYPDRTIP--------LLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQY 1071
HIL + + ++L + V+ E+GTG VHTAPGHG+ED +V Q+Y
Sbjct: 291 GLRYVHILMDEYPRQKEFKEKYEWAHRVILADFVTLEEGTGLVHTAPGHGEEDFEVGQKY 350
Query: 1072 GLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEM 1251
GL +P+D +G Y +E G+++ +A+P I++ E+
Sbjct: 351 GL------PVYSPLDDQGKY-------TEGKWKGIYVKEADPKIIEHLREKGYLVKAGEI 397
Query: 1252 HHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITH-VTWYPQWGQARILSMIEN 1428
H YPHCWR KTP++FRAT QWF+ + + ++ +K VTWYP W + R + + +
Sbjct: 398 EHKYPHCWRCKTPLIFRATDQWFLKISK--VKDKIIKENDEKVTWYPDWVKIRFDNGVRD 455
Query: 1429 RPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQG--VDIWYSLDQ--- 1593
DW ISRQR WG+P+P++ S + ++A +E G +++ S ++
Sbjct: 456 SGDWVISRQRYWGIPLPIWQSEDGEIYVVGSWRELVELAVAIEVNGERIELPESYEEKLK 515
Query: 1594 --TELLGTE---------------ADQYEKITDILDVWFDSGITHEAVLLERGLPK---- 1710
E LG E ++ D++DVWFDSGI A L G P+
Sbjct: 516 VIEEKLGPEDLHRPYVDAFIIKVNGKDMRRVKDVVDVWFDSGIASWASL---GYPRNKEL 572
Query: 1711 -----PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGN 1875
PAD +EG DQ WF S + + PY++ HG+ +D+ G KMSKSLGN
Sbjct: 573 FEKLWPADFIVEGEDQVTKWFYSQQAASIVAFDTVPYRRVAMHGYVLDEKGDKMSKSLGN 632
Query: 1876 GIEPQDIIKTLGADILRLWI--ASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLG--- 2040
I P+++++ G D R ++ A+ + N LK + ++R L
Sbjct: 633 IIRPEEVVERAGRDTFRFYMLWATNPWEN--------LKFSWKGVEQVRRMLNILWNVYV 684
Query: 2041 ------NLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNF 2202
+L FDP D+WI+ R L ++ + + + + NF
Sbjct: 685 LASTYMSLDNFDPRKLNPDELPFREEDKWILSRVNSLISEVENGIESFYLTKATRALYNF 744
Query: 2203 CSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
DL Y+ + + RL+ ED P + +A ++ + +R +AP + A+E++ L
Sbjct: 745 VVEDLSRWYVRLIRKRLWVEGED-PDKLAAYYTLWKVFDVLLRLLAPFTPYIAEEIYQNL 803
Query: 2383 --PGDHADNVLFTTW 2421
P + ++V W
Sbjct: 804 IRPFTNVESVHMLDW 818
>gi|1174517|sp|P46207|SYI_AQUPY ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|2147612|pir||I39658
isoleucine--tRNA ligase (EC 6.1.1.5) - Aquifex pyrophilus
(fragment) >gi|598059 (L37096) isoleucyl-tRNA synthetase
[Aquifex pyrophilus]
Length = 529
Score = 372 bits (945), Expect = e-102
Identities = 221/527 (41%), Positives = 289/527 (53%), Gaps = 29/527 (5%)
Frame = +1
Query: 289 DCHGLPIEIAIEKKYGKVGV---TLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDA 459
D HGLPIE A+EK+ K + +L +FR+ CREYA + +Q+ +F RLG++GDW+
Sbjct: 1 DTHGLPIERAVEKELSKKKIRKESLPKTEFRKLCREYANRYVNIQKEEFIRLGVLGDWEN 60
Query: 460 PYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDV 639
PY T+ +EA EIR L K +KG R KPV+WC +A +AE+EY +K P + V
Sbjct: 61 PYLTMSPEYEATEIRELGKFFEKGLAYRSKKPVYWCIYDKTAEGQAEVEYYEKEDPSIYV 120
Query: 640 AYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSG 819
+P + AV IWTTTPWTLPA+L I V DY LVE
Sbjct: 121 KFP----------LKKEIEGKKAYAV-IWTTTPWTLPANLGIMVKEDADYSLVEVEGEV- 168
Query: 820 QRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNH--- 990
W G + KG + HPF + L
Sbjct: 169 ---WIVAKELLENFFK-NIGKTYTRVLKDVKGRDLVGLEYEHPFVDRDELKGYLSEETLK 224
Query: 991 ----------VSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPT 1140
VS + GTG VH APGHGQED+ V ++Y L + P+D G ++
Sbjct: 225 NMWRIYPSEFVSLDTGTGLVHMAPGHGQEDYTVGKRYNLEPYA------PLDDSGRFVEP 278
Query: 1141 TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
P F + G+ ++ AN LI+ + HSYPHCWR K P++FRATPQWF
Sbjct: 279 APEF----IRGVRVFDANKLIIALLKEKGYLVHEARIRHSYPHCWRCKNPVIFRATPQWF 334
Query: 1321 ISM----EQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFV 1488
I M E L +L+ I V W P++G+ RI SM+ENRPDW ISRQR WGVPI +F
Sbjct: 335 IGMDIEYEGKTLSGESLEEIEKVKWIPEYGKNRIKSMVENRPDWCISRQRFWGVPITVFY 394
Query: 1489 HRHSGAPHPRSAALMRQVADRVEQQ--GVDIWYSLDQTELLGTE-------ADQYEKITD 1641
+ G + + ++A VE+ G D+W+ E+L + K D
Sbjct: 395 CENCGEVI-KDKEVFERIASLVEKHPGGTDVWFEKSPEEILPEGYKCPKCGGTSFRKEED 453
Query: 1642 ILDVWFDSGITHEAVLLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLT 1821
ILDVWFDSG +H +V+ G K ADLYLEG+DQHRGWFQ+SLL V APY+ LT
Sbjct: 454 ILDVWFDSGCSHASVIRPLGFEK-ADLYLEGSDQHRGWFQASLLESVGSYGEAPYRSVLT 512
Query: 1822 HGFTVDQHGRKMSKSL 1869
HGF VD+ GRKMSKSL
Sbjct: 513 HGFIVDEQGRKMSKSL 528
>gi|5104013|dbj|BAA79329.1| (AP000059) 1064aa long hypothetical
isoleucyl-tRNA synthetase [Aeropyrum pernix]
Length = 1064
Score = 354 bits (898), Expect = 3e-96
Identities = 235/766 (30%), Positives = 381/766 (49%), Gaps = 37/766 (4%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPL-FLLHDGPPYANGQ-IHLGHAVNKILKDIIIKSK 249
E + WE + Y +++ + P F DGPPYA+ + IH+G A NK++KD++++
Sbjct: 19 ESFVKSYWEENSIYRKVKEKSSRAPRKFYFLDGPPYASAKSIHIGTAWNKVVKDVVLRFY 78
Query: 250 HLDGFDAPYIPGWDCHGLPIEIAIEKKYG---------KVGVTLDAVQFRQKCREYAAEQ 402
+ G++ PG+D HGLPIE+ IE+ G KVGV F C+ + E
Sbjct: 79 RMTGYNVWDKPGYDTHGLPIEVKIEQSLGVRVKREIEEKVGVE----NFIAACKRFVDEN 134
Query: 403 IQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGS 582
++ R FK +G+ DW+ PY T + + K +KG L +G + +HWC C +
Sbjct: 135 MEAMTRQFKEIGVFMDWENPYVTYRDEYIESGWWLVKKAWEKGLLYKGYRVLHWCPRCET 194
Query: 583 ALAEAEI-EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASL 759
LA+ E+ EY + P + V +P + +WTTTPWTLPA+
Sbjct: 195 TLADYEVSEYRELEDPSIYVKFPVEGREGEYLL--------------VWTTTPWTLPANA 240
Query: 760 AISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHIL 939
+ P ++YV V R G++E + KG+ +E
Sbjct: 241 FVMAHPDMEYVKVRVG-----RDTLILAKARLDHVMREAGVSEYEVLEVLKGSQLEGLRY 295
Query: 940 AHPFYP----DRTIP-----LLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYS 1092
HP R + ++ V+ +G+G VH+APGHG D+++ Q+ G
Sbjct: 296 RHPLEDVVDAQRELSKWHKVVMAPEAVTPHEGSGLVHSAPGHGTIDYEIAQRIG------ 349
Query: 1093 AAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHC 1272
A ++ VD RG +S L G +AN IV+ + H YP C
Sbjct: 350 APVVSLVDERGFMTEAAGKYSGLYFRG----EANKAIVEDLRARGALFHAATIVHRYPVC 405
Query: 1273 WRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISR 1452
WR KTP++ RAT QWF+++ + L++ ++ V W P W + R ++M+ DW ISR
Sbjct: 406 WRCKTPLLLRATTQWFVAVTR--LKNQLMREAEKVEWQPGWAKTRFMNMLRELRDWVISR 463
Query: 1453 QRTWGVPIPLFVHRHSGAPHP-RSAALMRQVADRVEQQGVDIWYSLDQTELLGTEAD-QY 1626
QR WG+P+P++ G H S + + R + W +D+ EL
Sbjct: 464 QRYWGIPLPVWRCSSCGYEHVVGSVEELESMGGRRPENLHRPW--VDRVELKCPRCGGSM 521
Query: 1627 EKITDILDVWFDSGITHEAVLLERGLP---------KPADLYLEGADQHRGWFQSSLLTG 1779
+++ D+LDVWFDSGI A L G P KP D +EG DQ RGWF S L +G
Sbjct: 522 KRVPDVLDVWFDSGIAFYASL---GYPRDRETWERLKPVDFIVEGHDQIRGWFFSLLRSG 578
Query: 1780 VAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNE 1959
V PY++ L HGF +D+ GR+M KSLGN ++ +++I + D++R W+ +
Sbjct: 579 VIGFGETPYRRVLVHGFALDEQGREMHKSLGNYVDFEELIAKVPRDVVRFWVLQNTVWED 638
Query: 1960 MSLS---QEILKRTTDAYRRIRNTARFLLGNLHGFDP-TLHLVPLSDMIAL-DRWIVHRA 2124
+ S ++++R + + A +G L FDP L + D + + DRWI+ R
Sbjct: 639 LRFSWKGLDLMRRDFNVIWNVYAFASIYMG-LDRFDPRRTSLSSVEDSLEVEDRWILSRL 697
Query: 2125 FELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAM 2304
L++ A + + + +F D+ YL + + R++ D P +R+A +
Sbjct: 698 ASLKRRYLTAMEDLRIHDAARALRSFIIEDVSHWYLRIIRRRVWE-EVDTPSKRAAYATL 756
Query: 2305 YHLTAAFVRWIAPILSFTADELW 2373
Y + ++ AP++ +TA+ L+
Sbjct: 757 YKVLWEWLLMAAPLIPYTAEYLY 779
>gi|6015754|emb|CAB57581.1| (Y18930) isoleucyl-tRNA synthetase
[Sulfolobus solfataricus]
Length = 986
Score = 319 bits (809), Expect = 7e-86
Identities = 221/718 (30%), Positives = 347/718 (47%), Gaps = 28/718 (3%)
Frame = +1
Query: 220 ILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG---------KVGVTLDAVQFR 372
++KD I++ + + G PG+D HGLPIE+A EK G K+GV F
Sbjct: 1 MIKDCILRYQRVLGKRVHDQPGYDTHGLPIEVATEKLLGISNKQEIIDKIGVET----FI 56
Query: 373 QKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTK 552
KC+E+A ++FK +G+ DW+ PY TLD + + + K +KG L +GT
Sbjct: 57 NKCKEFALSNADKMTQNFKNVGVFMDWERPYYTLDPSYISSSWSVIKKAYEKGMLDKGTA 116
Query: 553 PVHWCFDCGSALAEAEI-EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWT 729
+HWC C + L++ E+ EY D P + V + + + + IWT
Sbjct: 117 VLHWCPRCETTLSDYEVSEYRDLEDPSIYVKFK--------------IKGEKNRYLLIWT 162
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWT+P+++ + + DY VE Y I
Sbjct: 163 TTPWTIPSNVFVMINKDYDYADVEVNGEILVIAKDRVEAVMKEASITNYKILRTYKGSEL 222
Query: 910 KGAAME----QHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL 1077
G E + + A D + GN V+ DGTG VH+A GHG+ED V Q+YG
Sbjct: 223 IGIKYEHPLREFVSAQTKLDDFHQVVDAGNIVTLTDGTGLVHSATGHGEEDFTVGQKYGF 282
Query: 1078 LNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHH 1257
+ V+ RG + + GL + A+ I+ ++ H
Sbjct: 283 ------PVVMFVNDRGEFTEEGGKYK-----GLKVRDASKAIISDLKSKNTLFFEGKIVH 331
Query: 1258 SYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPD 1437
YP CWR KTP++ RA QWFI + + ++ L I V W P WG++RI +M++ D
Sbjct: 332 RYPVCWRCKTPLILRAIDQWFIRVTK--IKDKMLNEIEKVNWIPDWGKSRISNMVKELRD 389
Query: 1438 WTISRQRTWGVPIPLFV-HRHSGAPHPRSAALMRQVA-DRVEQQGVDIWYSLDQTELLGT 1611
W ISRQR WG P+P+++ R + S + +A D V W +D +
Sbjct: 390 WVISRQRFWGTPLPIWICERCNNVMVVGSKEELESIAIDPVPNDLHRPW--IDNVRVKCN 447
Query: 1612 EADQYEK-ITDILDVWFDSGITHEAVLLERGLPK-----PADLYLEGADQHRGWFQSSLL 1773
+ K I D+ DVWFDSG+ A L + K P DL LEG DQ RGWF S L
Sbjct: 448 KCGGVAKRIPDVADVWFDSGVAFFASLGKDWQEKWKELGPVDLVLEGHDQLRGWFFSLLR 507
Query: 1774 TGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYS 1953
+G+ + + APY L HGF +D+ GR+M KSLGN +EP +++ G DILRLW+
Sbjct: 508 SGLILLDRAPYTSVLVHGFMLDEQGREMHKSLGNYVEPSVVVEKYGRDILRLWLLRNTTW 567
Query: 1954 NEMSLSQEILKRTTDAYRRIRNTARF--LLGNLHGFDPTLHLVPLSDMIAL----DRWIV 2115
+ S + L+ T + I NT F + NL F+P + L D+I D WI+
Sbjct: 568 EDAKFSWKALELTKRDLQIIWNTFVFASMYMNLDNFEPDKY--TLDDIIKYAKIEDLWIL 625
Query: 2116 HRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQ 2295
R + + + + Y E+ ++NF D+ Y+ + + R + + + + +
Sbjct: 626 SRFNSMLKKVNESMKDYKVHEMTNYLINFLIEDVSRFYIRLIRKRAW-IEANTQDKIAMY 684
Query: 2296 TAMYHLTAAFVRWIAPILSFTADELW 2373
+Y++ ++ + I+ F +++++
Sbjct: 685 YILYYILKQWIILASTIIPFISEKIY 710
>gi|6094403|sp|P56690|SYI_THETH ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|4930049|pdb|1ILE|
Isoleucyl-Trna Synthetase
Length = 821
Score = 315 bits (798), Expect = 1e-84
Identities = 239/774 (30%), Positives = 358/774 (45%), Gaps = 31/774 (4%)
Frame = +1
Query: 61 DLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
+ PK E +L W+R+ + + + KG P + +++GPP ANG H+GHA + KD+
Sbjct: 9 NFPKLEEEVLAFWKREKIFQKSVENRKGGPRYTVYEGPPTANGLPHVGHAQARSYKDLFP 68
Query: 241 KSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG-KVGVTLDAV---QFRQKCREYAAEQIQ 408
+ K + G+ AP GWD HGLP+E+ +EKK G K ++A +F Q CRE +
Sbjct: 69 RYKTMRGYYAPRRAGWDTHGLPVELEVEKKLGLKSKREIEAYGIERFNQACRESVFTYEK 128
Query: 409 LQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSAL 588
+R+ D + Y TL+ + +L + D+G L R K V +C CG+ L
Sbjct: 129 EWEAFTERIAYWVDLEDAYATLEPTYIESIWWSLKNLFDRGLLYRDHKVVPYCPRCGTPL 188
Query: 589 AEAEIE--YTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLA 762
+ E+ Y + P V V +P +P L + L IWTTTPWTLP ++A
Sbjct: 189 SSHEVALGYKEIQDPSVYVRFPLKEPKKLGLEKASLL---------IWTTTPWTLPGNVA 239
Query: 763 ISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAK------GAAM 924
+V P Y + G+ L+ + G A+
Sbjct: 240 AAVHPEYTYAAFQ---------------VGDEALILEEGLGRKLLGEGTQVLKTFPGKAL 284
Query: 925 EQHILAHPFYP---DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSA 1095
E P YP ++ ++L ++VS EDGTG VH AP G ED + + YGL
Sbjct: 285 EGLPYTPP-YPQALEKGYFVVLADYVSQEDGTGIVHQAPAFGAEDLETARVYGL------ 337
Query: 1096 AELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCW 1275
L VD G L PF GL+ +AN I+ HSYPHCW
Sbjct: 338 PLLKTVDEEGKLL--VEPFK-----GLYFREANRAILRDLRGRGLLFKEESYLHSYPHCW 390
Query: 1276 RHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISR 1452
R TP+++ AT WFI + + ++ + W P + R ++N DW +SR
Sbjct: 391 RCSTPLMYYATESWFI--KNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVDWALSR 448
Query: 1453 QRTWGVPIPLFVHRHSGAPHP-RSAALMRQVADRVEQQGVDIWYS-LDQTELLGTEADQY 1626
R WG P+P++V + G S ++ A + + D +DQ EL
Sbjct: 449 NRYWGTPLPIWVCQACGKEEAIGSFQELKARATKPLPEPFDPHRPYVDQVELACACGGTM 508
Query: 1627 EKITDILDVWFDSG----------ITHEAVLLERGLPKPADLYLEGADQHRGWFQSSLLT 1776
++ ++DVW+DSG HE V E PAD EG DQ RGWF S
Sbjct: 509 RRVPYVIDVWYDSGAMPFASLHYPFEHEEVFRESF---PADFIAEGIDQTRGWFNSLHQL 565
Query: 1777 GVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWI-ASTDYS 1953
GV + + +K + HG +D+ G+KMSKS GN ++P DII+ GAD LR +I S
Sbjct: 566 GVMLFGSIAFKNVICHGLILDEKGQKMSKSKGNVVDPWDIIRKFGADALRWYIYVSAPPE 625
Query: 1954 NEMSLSQEILKRTT-DAYRRIRNTARFLLGNLHGFDPTL-HLVPLSDMIALDRWIVHRAF 2127
+ +++ T D + + N F + + P L + P +DRW++ R
Sbjct: 626 ADRRFGPNLVRETVRDYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQ 685
Query: 2128 ELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMY 2307
+L Q + A YD + + +F DL Y+ + R + EDA R +A +Y
Sbjct: 686 DLIQRVTEALEAYDPTTSARALRDFVVEDLSQWYVRRNRRRFW-KNEDALDREAAYATLY 744
Query: 2308 HLTAAFVRWIAPILSFTADELWSYL 2382
AP F A+ LW L
Sbjct: 745 EALVLVATLAAPFTPFLAEVLWQNL 769
>gi|5689948|emb|CAB51985.1| (AL109663) putative isoleucyl-tRNA
synthetase [Streptomyces coelicolor A3(2)]
Length = 1047
Score = 290 bits (734), Expect = 4e-77
Identities = 217/778 (27%), Positives = 362/778 (45%), Gaps = 38/778 (4%)
Frame = +1
Query: 49 PMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
P + DLP E A+L+ W +A+ ++GRP ++ ++GPP ANG H ++ K
Sbjct: 10 PAQVDLPALEHAVLDFWREQKIFAKSLEQSEGRPEWVFYEGPPTANGMPGAHHIEARVFK 69
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGV----TLDAVQFRQKCREYAA 396
D+ + + + G+ GWDCHGLP+E+A+EK+ G G +F KCRE
Sbjct: 70 DVFPRFRTMRGYHVGRKAGWDCHGLPVELAVEKELGFSGKQDIEAYGIAEFNAKCRESVT 129
Query: 397 EQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDC 576
R+G D PY+T+D + +L +I +KG L++ + WC C
Sbjct: 130 RHTDAFEELTTRMGYWADLQDPYRTMDPEYIESVWWSLKEIFNKGLLVQDHRVAPWCPRC 189
Query: 577 GSALAEAEIE--YTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLP 750
G+ L++ E+ Y P V V +P L LA + A+ +WTTTPWTL
Sbjct: 190 GTGLSDHELAQGYETVVDPSVYVRFP-LTSGPLAG----------EAALVVWTTTPWTLV 238
Query: 751 ASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHG------SAK 912
++ A++ P + YV+ G+ + +A+ L G S
Sbjct: 239 SNTAVAAHPDVTYVVAT----DGEEKLVVAEPL----------LAKALGEGWETTGQSFT 284
Query: 913 GAAMEQHILAHPF----YPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLL 1080
GA ME+ PF +P+ ++ ++V+ EDGTG VH +P G++D +V + YGL
Sbjct: 285 GAEMERWTYQRPFELVEFPEPAHYVVNADYVTTEDGTGLVHQSPAFGEDDLKVCRAYGL- 343
Query: 1081 NHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHS 1260
+NPV G + P + G+ KA+ + + HS
Sbjct: 344 -----PVVNPVRPDGTFEEDVP-----LVGGVFFKKADEKLTEDLETRGLLFKHIPYEHS 393
Query: 1261 YPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQ-ARILSMIENRPD 1437
YPHCWR T +++ A P W+I A++ L+ W+P + R + N D
Sbjct: 394 YPHCWRCHTALLYYAQPSWYI--RTTAIKDRLLQENEKTNWFPDAVKHGRYGDWLNNNID 451
Query: 1438 WTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSL--DQTELLGT 1611
W +SR R WG P+P++ S A + +++ +Q +D D T
Sbjct: 452 WALSRNRYWGTPLPIWRCAEDHLTVVGSRAELTELSG-TDQSSLDPHRPFIDDVTFTCAQ 510
Query: 1612 EADQYE--KITDILDVWFDSGITHEAVLLERGLPK----------PADLYLEGADQHRGW 1755
E E ++ +++D W+DSG A + G P PA E DQ RGW
Sbjct: 511 EGCSLEAVRVPEVIDAWYDSGSMPFA---QWGYPYKNKELFESRYPAQFISEAIDQTRGW 567
Query: 1756 FQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWI 1935
F + + G + + + Y+ + G + + GRKMSK LGN ++P ++ GAD +R ++
Sbjct: 568 FYTLMAVGTLVFDKSSYENVVCLGHILAEDGRKMSKHLGNILQPIPLMDQHGADAVRWFM 627
Query: 1936 AS--TDYSNEM---SLSQEILKRTTDAYRRIRNTARF--LLGNLHGFDPTLHLVPLSDMI 2094
A+ + ++ QE++++T Y NT F L G+ P+ +D
Sbjct: 628 AAGGSPWAARRVGHGTIQEVVRKTLLTY---WNTVAFQALYARTTGWAPSEADPAPADRP 684
Query: 2095 ALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDA 2274
LDRW++ L + A YD + + F DL + Y+ ++ R +
Sbjct: 685 VLDRWLLSELHALTDQVTQALDAYDTQRAGKLLSAFVD-DLSNWYVRRSRRRFW------ 737
Query: 2275 PGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
G ++A ++ + + +AP+ F + +W L
Sbjct: 738 QGDKAALRTLHEVVETVTKLMAPLTPFITERVWQDL 773
>gi|4376371|gb|AAD18262| (AE001597) Isoleucyl-tRNA Synthetase
[Chlamydia pneumoniae]
Length = 1043
Score = 289 bits (731), Expect = 1e-76
Identities = 214/776 (27%), Positives = 357/776 (45%), Gaps = 33/776 (4%)
Frame = +1
Query: 55 RGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDI 234
+ K+E +L+ W+ + + + + +G+ L+ +DGPP+A G H GH + +KD+
Sbjct: 8 KNSFAKKEEQVLKFWKDNQIFEKSLQNRQGKTLYSFYDGPPFATGLPHYGHLLASTIKDV 67
Query: 235 IIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKV--GVTLD--AVQFRQKCREYAAEQ 402
+ + +DG+ P GWDCHG+P+E +EK G D F ++CR+
Sbjct: 68 VGRYATMDGYYVPRRFGWDCHGVPVEYEVEKSLSLTAPGAIEDFGIASFNEECRKIVFRY 127
Query: 403 IQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGS 582
+ R+G D+ + +KT+D F + ++G + GTK V + G+
Sbjct: 128 VHEWEYYINRIGRWVDFSSTWKTMDASFMESVWWVFQSLYNQGLVYEGTKVVPFSTALGT 187
Query: 583 ALA--EAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPAS 756
L+ EA Y + P + V P + SA ++ +WTTTPWTLP++
Sbjct: 188 PLSNFEASQNYKEVDDPSLVVRMPLQNDSA---------------SLLVWTTTPWTLPSN 232
Query: 757 LAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHI 936
+AI+VG TL YV ++ SG+ +W E +I S G +
Sbjct: 233 MAIAVGETLVYVRIQ-DKKSGE-QWILSQGCVSRWFS---NPEEFVILESFSGKDLVGRT 287
Query: 937 LAHPF------YPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAA 1098
PF + ++ + V +GTG VH AP G+ D V ++ NH
Sbjct: 288 YEPPFTFFQSKREEGAFRVIAASFVEESEGTGVVHMAPAFGEGDFLVCKE----NHVPL- 342
Query: 1099 ELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWR 1278
+ PVDA G + P + G +I A+ I+ + H YP CWR
Sbjct: 343 -VCPVDAHGSFTEEIPQYQ-----GQYIKHADKEIIKFLKKEGRIFYHGTVKHRYPFCWR 396
Query: 1279 HKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQ-ARILSMIENRPDWTISRQ 1455
TP++++A WF+++E+ ++ L+A + + W P+ Q R +E DW ISR
Sbjct: 397 TDTPLIYKAVNSWFVAVEK--IKDKMLRANSSIHWVPEHIQEGRFGKWLEGARDWAISRN 454
Query: 1456 RTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKI 1635
R WG PIP++ S +R++ + Q DI + + + +I
Sbjct: 455 RYWGTPIPIW---KSADGEILVVGSIRELEELTGTQITDIHRHFIDDLNIVKDGKPFHRI 511
Query: 1636 TDILDVWFDSGITHEAV-------LLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDN 1794
+ D WFDSG A E PAD EG DQ RGWF + + + +
Sbjct: 512 PYVFDCWFDSGAMPYAQNHYPFENQKETEEAFPADFIAEGLDQTRGWFYTLTVISAILFD 571
Query: 1795 AAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIAS----------- 1941
++ + +G + + G KMSK L N P+ ++ T GAD LRL++
Sbjct: 572 RPAFRNAIVNGIILAEDGNKMSKRLNNYPSPKYVLDTYGADALRLYLLHSVVVKAEDLRF 631
Query: 1942 TDYSNEMSLSQEILKRTTDAYRRIRNTARFL--LGNLHGFDPTLHLVPLSDMIALDRWIV 2115
+D E L Q +L T N F L+GFDP + + +D+WI+
Sbjct: 632 SDKGIEGVLKQILLPLT--------NVLSFFNTYAELYGFDPKSQDIEPA-YTEIDQWIL 682
Query: 2116 HRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQ 2295
+ + ++ + ++Y V+ + F DL + Y+ + R + ED P RR+A
Sbjct: 683 SNLYSVVGKVRESMSQYHLNFAVEPFVTFID-DLTNWYIRRCRRRFWE-AEDTPDRRAAF 740
Query: 2296 TAMYHLTAAFVRWIAPILSFTADELWSYL 2382
+ +Y + F + IAP + F A++++ L
Sbjct: 741 STLYEVLTVFCKVIAPFVPFLAEDIYQKL 769
>gi|3328409|gb|AAC67609.1| (AE001277) Isoleucyl-tRNA Synthetase
[Chlamydia trachomatis]
Length = 1036
Score = 287 bits (728), Expect = 2e-76
Identities = 212/773 (27%), Positives = 349/773 (44%), Gaps = 29/773 (3%)
Frame = +1
Query: 73 REPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKH 252
+E IL W+ D + + + +G P F +DGPP+A G H GH + +KD++ +
Sbjct: 12 KEEKILSFWKEQDIFQKTLDNREGCPTFSFYDGPPFATGLPHYGHLLAGTIKDVVCRYAS 71
Query: 253 LDGFDAPYIPGWDCHGLPIEIAIEKKYGKVG----VTLDAVQFRQKCREYAAEQIQLQRR 420
+DG P GWDCHG+P+E +EK G F ++CR+ +
Sbjct: 72 MDGHYVPRRFGWDCHGVPVEYEVEKSLGLTEPGAIERFGVANFNEECRKIVFRYADEWKY 131
Query: 421 DFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALA--E 594
R+G D+ A ++T+D F + D+G + GTK V + G+ L+ E
Sbjct: 132 FVDRIGRWVDFSATWRTMDLSFMESVWWVFRSLYDQGLVYEGTKVVPFSTKLGTPLSNFE 191
Query: 595 AEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVG 774
A Y + P V V + D WTTTPWTL +++A++V
Sbjct: 192 AGQNYKEVDDPSVVVKFALQDNQGFLLA---------------WTTTPWTLVSNMALAVH 236
Query: 775 PTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFY 954
P L YV ++ + Y E + S K + + P++
Sbjct: 237 PELTYVRIKDKESGDEYILGQESLPRWFPDRESY---EWIGQLSGKSLVGQSYEPLFPYF 293
Query: 955 PDR----TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDAR 1122
D+ +L + + +GTG VH AP G+ D Q+ ++ + PVD +
Sbjct: 294 QDKKELEAFRILPADFIEESEGTGIVHMAPAFGEADFFACQE------HNVPLVCPVDNQ 347
Query: 1123 GVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFR 1302
G Y F G +I A+ I + H YP CWR +P++++
Sbjct: 348 GCYTAEVKDF-----VGEYIKSADKGIARRLKNENKLFYQGTVRHRYPFCWRTDSPLIYK 402
Query: 1303 ATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQRTWGVPIP 1479
A WF+++E+ ++S LKA + W P+ Q R +E DW ISR R WG PIP
Sbjct: 403 AVNSWFVAVEK--VKSKMLKANESIHWTPEHIKQGRFGKWLEGARDWAISRNRYWGTPIP 460
Query: 1480 LFVHRHSGAPHPRSAALMRQVADRVEQQGVDIW-YSLDQTELLGTEADQYEKITDILDVW 1656
++ S ++++ Q+ VD+ + +D+ E + + +I + D W
Sbjct: 461 IW---RSDDGELLVIGSIQELEALSGQKIVDLHRHFIDEIE-INQNGKSFRRIPYVFDCW 516
Query: 1657 FDSGITHEA---VLLERGLPK----PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQC 1815
FDSG A ER PAD EG DQ RGWF + + A+ + +K
Sbjct: 517 FDSGAMPYAQNHYPFERAEETEACFPADFIAEGLDQTRGWFYTLTVIAAALFDQPAFKNV 576
Query: 1816 LTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTT 1995
+ +G + + G KMSK L N P+ I+ GAD LRL++ N + + E L+ +
Sbjct: 577 IVNGIILAEDGNKMSKRLNNYPSPKMIMDAYGADALRLYLL-----NSVVVKAEDLRFSD 631
Query: 1996 DAYRRIRNTARFLLGN----------LHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTI 2145
+ L N L+GFDP ++ +DRWI+ + L
Sbjct: 632 KGVESVLKQVLLPLSNALAFYKTYAELYGFDP--KETDNIELAEIDRWILSSLYSLVGKT 689
Query: 2146 KAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAF 2325
+ + ++YD V ++F DL + Y+ ++ R + ED+ RR+A + +Y + F
Sbjct: 690 RESMSQYDLHAAVNPFVDFIE-DLTNWYIRRSRRRFWD-AEDSADRRAAFSTLYEVLVVF 747
Query: 2326 VRWIAPILSFTADELWSYLPGD 2391
+ IAP + F A++++ L G+
Sbjct: 748 SKVIAPFIPFIAEDMYQQLRGE 769
>gi|1174520|sp|P46214|SYI_PYRFU ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|598367 (L37105)
transfer RNA-Ile synthetase [Pyrococcus furiosus]
Length = 546
Score = 282 bits (713), Expect = 1e-74
Identities = 190/529 (35%), Positives = 278/529 (51%), Gaps = 55/529 (10%)
Frame = +1
Query: 289 DCHGLPIEIAIEKKYG---------KVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGI 441
D HGLPIE+ +E+ G K+GV F QKC+E+A +++ FK LG+
Sbjct: 1 DTHGLPIEVKVEQALGLKTKKEIEEKIGVE----NFVQKCKEFALNNLRIMTEQFKMLGV 56
Query: 442 IGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI--EYTD 615
DWD PY T+ + L +KG L + + +HWC C +ALAE E+ EY
Sbjct: 57 WMDWDNPYMTIKNEYIESAWFTLKWAWEKGLLEKDKRVLHWCPRCETALAEHEVRGEYKL 116
Query: 616 KTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVL 795
+ P + V +P + IWTTTPWTLPA+LA+S P DYV
Sbjct: 117 RKDPSIYVKFPVEGKENEYLL--------------IWTTTPWTLPANLAVSALPDYDYVK 162
Query: 796 VEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQ----HILAHPFYPDR 963
V G +G+ + G+ ++ KG +E HIL + +
Sbjct: 163 V-GVDLNGREEYWILAKALVEKVLGDIGVKGEVVE-EFKGKELEGLRYVHILMDEYPRQK 220
Query: 964 TIP--------LLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDA 1119
++L + V+ E+GTG VHTAPGHG+ED +V Q+YGL + +PVD
Sbjct: 221 EFREKYEWVHRVILADFVTLEEGTGLVHTAPGHGEEDFEVGQKYGLPVY------SPVDD 274
Query: 1120 RGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVF 1299
+G Y+ E G+++ +A+P I++ E+ H YPHCWR KTP++F
Sbjct: 275 QGKYV-------EGKWKGVYVKEADPQIIEHLKEKGYLVKAGEIEHKYPHCWRCKTPLIF 327
Query: 1300 RATPQWFISMEQAALRSAALKAITH-VTWYPQWGQARILSMIENRPDWTISRQRTWGVPI 1476
RAT QWF+ + + ++ +K VTWYP+W + R + + + DW ISRQR WG+P+
Sbjct: 328 RATDQWFLKVSK--VKEKIIKENDEKVTWYPEWVKIRFDNGVRDSGDWVISRQRYWGIPL 385
Query: 1477 PLFVHRHSGAPHPRS--AALMRQVADRVEQQGVDIWYSLDQ-----TELLGTE------- 1614
P++ S + VA V + +D+ S ++ E LG E
Sbjct: 386 PIWQSEDGEIYVVGSWKELVELTVAIEVNSERIDLPESYEEKLKVIEEKLGPEDLHRPYV 445
Query: 1615 --------ADQYEKITDILDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQ 1743
+ ++ D++DVWFDSGI A L G P+ PAD +EG DQ
Sbjct: 446 DAFIIKVNGKEMRRVKDVVDVWFDSGIASWASL---GYPRNKELFEKLWPADFIVEGEDQ 502
Query: 1744 HRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGN 1875
WF S V + PY+ HG+ +D+ G KMSKSLGN
Sbjct: 503 VTKWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGN 546
>gi|4504555|ref|NP_002152.1|| isoleucine-tRNA synthetase >gi|440799
(U04953) isoleucyl-tRNA synthetase [Homo sapiens]
Length = 1262
Score = 282 bits (713), Expect = 1e-74
Identities = 228/778 (29%), Positives = 347/778 (44%), Gaps = 39/778 (5%)
Frame = +1
Query: 49 PMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
P + P E ILE W + + + +K +P F +DGPP+A G H GH + +K
Sbjct: 6 PENINFPAEEEKILEFWTEFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIK 65
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG--------KVGVTLDAVQFRQKCR 384
DI+ + H GF GWDCHGLP+E I+K G K+G+T ++ +CR
Sbjct: 66 DIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKMGIT----EYNNQCR 121
Query: 385 EYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHW 564
+ RLG D+D YKTL +F ++ DKG + RG K + +
Sbjct: 122 AIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPF 181
Query: 565 CFDCGSALA--EAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTP 738
C + L+ E+ Y D P V V +P L D +++ WTTTP
Sbjct: 182 STACNTPLSNFESHQNYKDVQDPSVFVTFP--------------LEEDETVSLVAWTTTP 227
Query: 739 WTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGA 918
WTLP++LA+ V P + YV ++ Y I E KG
Sbjct: 228 WTLPSNLAVCVNPEMQYVKIKDVARGRLLILMEARLSALYKLESDYEILERFPGAYLKGK 287
Query: 919 AMEQHILAHPFYPDR---TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
L F + +L+ N+V E+GTG VH AP G ED++V + ++
Sbjct: 288 KYRP--LFDYFLKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGAEDYRVCMDFNIIRKD 345
Query: 1090 SAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH 1269
S + PVDA G + F AG ++ A+ I+ HSYP
Sbjct: 346 SLP-VCPVDASGCFTTEVTDF-----AGQYVKDADKSIIRTLKEQGRLLVATTFTHSYPF 399
Query: 1270 CWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTI 1446
CWR TP++++A P WF+ +E L+ W P+ + R + +++ DWTI
Sbjct: 400 CWRSDTPLIYKAVPSWFVRVENMV--DQLLRNNDLCYWVPELVREKRFGNWLKDARDWTI 457
Query: 1447 SRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIW----YSLDQTELLGT- 1611
SR R WG PIPL+V + + VA+ E G I S+D +
Sbjct: 458 SRNRYWGTPIPLWV-----SDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPSRC 512
Query: 1612 EADQYEKITDILDVWFDSGI-----THEAVLLERGLPK--PADLYLEGADQHRGWFQSSL 1770
+I+++ D WF+SG H +R PAD EG DQ RGWF + L
Sbjct: 513 GKGSLHRISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLL 572
Query: 1771 LTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDY 1950
+ A+ P+K + +G + G+KMSK N +P II+ GAD LRL++ ++
Sbjct: 573 VLATALFGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPV 632
Query: 1951 SNEMSLS----------QEILKRTTDAYR-RIRNTARFLLGNLHGFDPTLHLVPLSDMIA 2097
+L +++L +AYR I+N R F + V S I
Sbjct: 633 VRAENLRFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNIT 692
Query: 2098 LDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRL--YTMRED 2271
DRWI+ L + Y +V ++ F + L + Y+ + + RL ED
Sbjct: 693 -DRWILSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDI-LTNWYVRMNRRRLKGENGMED 750
Query: 2272 APGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
A ++ + + R IAP F + ++ L
Sbjct: 751 CV---MALETLFSVLLSLCRLIAPYTPFLTELMYQNL 784
>gi|3122901|sp|O13651|SYIC_SCHPO ISOLEUCYL-TRNA SYNTHETASE,
CYTOPLASMIC (ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|2257546|dbj|BAA21439| (AB004538) ISOLEUCYL-TRNA
SYNTHETASE ,CYTOPLASMIC [Schizosaccharomyces pombe]
>gi|2950493|emb|CAA17821.1| (AL022072) isoleucyl-trna
synthetase, cytoplasmic [Schizosaccharomyces pombe]
Length = 1064
Score = 281 bits (711), Expect = 2e-74
Identities = 225/777 (28%), Positives = 361/777 (45%), Gaps = 41/777 (5%)
Frame = +1
Query: 52 MRGDLPKREPAILERW-ERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
M ++PK E I+E W E D F+ QL+ ++GRP + DGPP+A G+ H GH + +K
Sbjct: 1 MSFNVPKEEEKIVEFWREIDAFHTQLKL-SQGRPTYTFFDGPPFATGRPHHGHLLASTIK 59
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVG----VTLDAVQFRQKCREYAA 396
D + + L G+ GWD HGLP+E I+KK G G + + ++ +CR+
Sbjct: 60 DSVTRYACLKGYHVERRFGWDTHGLPVEHEIDKKLGITGSDDVMAMGIDKYNAECRKIVM 119
Query: 397 EQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDC 576
R +RLG D+D YKTL F ++ KG + RG + + + C
Sbjct: 120 TYASEWRATVERLGRWIDFDNDYKTLYPSFMESVWWVFKELHTKGKVYRGYRVMPYSTAC 179
Query: 577 GSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPAS 756
+ L+ E + K P DP A+ F + P+V WTTTPWTLP++
Sbjct: 180 TTPLSNFEAQQNYKEVP---------DP-AIVVAFQSISDPEVSFLA--WTTTPWTLPSN 227
Query: 757 LAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHI 936
LA++V P L Y+ + S ++ + E+L K +++
Sbjct: 228 LALAVHPDLQYIKIL-DKDSNKKYILMESCLGILYKNPKKANFEILERFQGKALDGQKYE 286
Query: 937 LAHPFYP----DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLL--NHYSAA 1098
P++ +R L ++V GTG VH AP G+ D+ G++ +H
Sbjct: 287 PLFPYFKSTFGERAFKLYSADYVEEGSGTGIVHQAPAFGEADYDAAWAAGIIDADHQPPC 346
Query: 1099 ELNPVDARGVYLPTTPPFSELT-LAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCW 1275
PVD +G+ SE+T AG ++ A+ I+ ++ HSYP CW
Sbjct: 347 ---PVDEQGLLT------SEITDFAGQYVKDADKEIIRSLKASGHLVKHSQIFHSYPFCW 397
Query: 1276 RHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQ-WGQARILSMIENRPDWTISR 1452
R TP+++RA P WF+ +++ + + ++ + W PQ R + ++N DW ISR
Sbjct: 398 RSDTPLIYRAVPSWFVRVKE--ITNEMVENVMSTHWVPQNIRDKRFANWLKNARDWNISR 455
Query: 1453 QRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGV----DIWY-SLDQTELLGTEA 1617
R WG PIPL+V + + + + E GV DI S+D + +
Sbjct: 456 NRYWGTPIPLWV-----SDDYEEVVCIGSIKELEELSGVSNITDIHRDSIDHITIPSKKG 510
Query: 1618 -DQYEKITDILDVWFDSGITHEAV-------LLERGLPKPADLYLEGADQHRGWFQSSLL 1773
+++++ D WF+SG A + E PAD EG DQ RGWF + +
Sbjct: 511 KGTLHRVSEVFDCWFESGSMPYASRHYPFERIEEFKHGFPADFISEGVDQTRGWFYTLTV 570
Query: 1774 TGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYS 1953
G + + APYK + G + + G+KMSK L N EP II+ G+D LRL++
Sbjct: 571 LGTLLFDKAPYKNVIVSGLVMAEDGKKMSKRLKNYPEPNLIIEKYGSDALRLYLI----- 625
Query: 1954 NEMSLSQEILKRTTDAYRRI--------RNTARF------LLGNLHGFDPTLHLVPLSDM 2091
N + EILK D R + N+ +F L + G D
Sbjct: 626 NSPVVRAEILKFKEDGVREVVTRVLIPWWNSYKFFEAQAALYKKVTGKDFVFDDAATLSS 685
Query: 2092 IALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMRED 2271
+DRWI+ R L + +Y +V +L ++ + Y+ + RL ED
Sbjct: 686 NVMDRWILARCQSLIGFVDEEMKQYRLYTVVPQLLGLIE-EMTNWYIRFNRRRL--KGED 742
Query: 2272 APGRR-SAQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
+A ++ + VR + P F + ++ +L
Sbjct: 743 GEIETINALNVLFEVLFTLVRIMGPFTPFITENIYQHL 780
>gi|730870|sp|P41252|SYI_HUMAN ISOLEUCYL-TRNA SYNTHETASE, CYTOPLASMIC
(ISOLEUCINE--TRNA LIGASE) (ILERS) (IRS)
>gi|2135522|pir||I59314 Isoleucyl tRNA Synthetase - human
>gi|551622|dbj|BAA05835| (D28473) isoleucyl-tRNA
synthetase [Homo sapiens]
Length = 1266
Score = 280 bits (710), Expect = 3e-74
Identities = 227/778 (29%), Positives = 347/778 (44%), Gaps = 39/778 (5%)
Frame = +1
Query: 49 PMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
P + P E ILE W + + + +K +P F +DGPP+A G H GH + +K
Sbjct: 10 PENINFPAEEEKILEFWTEFNCFQECLKQSKHKPKFTFYDGPPFATGLPHYGHILAGTIK 69
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG--------KVGVTLDAVQFRQKCR 384
DI+ + H GF GWDCHGLP+E I+K G K+G+T ++ +CR
Sbjct: 70 DIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKMGIT----EYNNQCR 125
Query: 385 EYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHW 564
+ RLG D+D YKTL +F ++ DKG + RG K + +
Sbjct: 126 AIVMRYSAEWKSTVSRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMPF 185
Query: 565 CFDCGSALA--EAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTP 738
C + L+ E+ Y D P V V +P L D +++ WTTTP
Sbjct: 186 STACNTPLSNFESHQNYKDVQDPSVFVTFP--------------LEEDETVSLVAWTTTP 231
Query: 739 WTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGA 918
WTLP++LA+ V P + YV ++ Y I E KG
Sbjct: 232 WTLPSNLAVCVNPEMQYVKIKDVARGRLLILMEARLSALYKLESDYEILERFPGAYLKGK 291
Query: 919 AMEQHILAHPFYPDR---TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
L F + +L+ N+V E+GTG VH AP G ED++V + ++
Sbjct: 292 KYRP--LFDYFLKCKENGAFTVLVDNYVKEEEGTGVVHQAPYFGAEDYRVCMDFNIIRKD 349
Query: 1090 SAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH 1269
S + PVDA G + F AG ++ A+ I+ HSYP
Sbjct: 350 SLP-VCPVDASGCFTTEVTDF-----AGQYVKDADKSIIRTLKEQGRLLVATTFTHSYPF 403
Query: 1270 CWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTI 1446
CWR TP++++A P WF+ +E L+ W P+ + R + +++ DWTI
Sbjct: 404 CWRSDTPLIYKAVPSWFVRVENMV--DQLLRNNDLCYWVPELVREKRFGNWLKDARDWTI 461
Query: 1447 SRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIW----YSLDQTELLGT- 1611
SR R WG PIPL+V + + VA+ E G I S+D +
Sbjct: 462 SRNRYWGTPIPLWV-----SDDFEEVVCIGSVAELEELSGAKISDLHRESVDHLTIPSRC 516
Query: 1612 EADQYEKITDILDVWFDSGI-----THEAVLLERGLPK--PADLYLEGADQHRGWFQSSL 1770
+I+++ D WF+SG H +R PAD EG DQ RGWF + L
Sbjct: 517 GKGSLHRISEVFDCWFESGSMPYAQVHYPFENKREFEDAFPADFIAEGIDQTRGWFYTLL 576
Query: 1771 LTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDY 1950
+ A+ P+K + +G + G+KMSK N +P II+ GAD LRL++ ++
Sbjct: 577 VLATALFGQPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVSIIQKYGADALRLYLINSPV 636
Query: 1951 SNEMSLS----------QEILKRTTDAYR-RIRNTARFLLGNLHGFDPTLHLVPLSDMIA 2097
+L +++L +AYR I+N R F + V S I
Sbjct: 637 VRAENLRFKEEGVRDVLKDVLLPWYNAYRFLIQNVLRLQKEEEIEFLYNENTVRESPNIT 696
Query: 2098 LDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRL--YTMRED 2271
DRWI+ L + Y +V ++ F + L + Y+ + + RL ED
Sbjct: 697 -DRWILSFMQSLIGFFETEMAAYRLYTVVPRLVKFVDI-LTNWYVRMNRRRLKGENGMED 754
Query: 2272 APGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
A ++ + + R +AP F + ++ L
Sbjct: 755 CV---MALETLFSVLLSLCRLMAPYTPFLTELMYQNL 788
>gi|6094404|sp|O83466|SYI_TREPA ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|3322738 (AE001222)
isoleucyl-tRNA synthetase (ileS) [Treponema pallidum]
Length = 1091
Score = 278 bits (704), Expect = 1e-73
Identities = 225/771 (29%), Positives = 364/771 (47%), Gaps = 65/771 (8%)
Frame = +1
Query: 61 DLPKREPAILERW-ERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDII 237
D +E IL W ER F + A+G+ ++ DGPP+A G H GH V +KDII
Sbjct: 10 DFVAQERRILAFWRERRVFEQSVAQRAQGKS-YVFFDGPPFATGLPHFGHFVPSTIKDII 68
Query: 238 IKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG---KVGVTLDAVQ-FRQKCREYAAEQI 405
+ + + G P GWDCHGLPIE IE++ K V V F CR +
Sbjct: 69 PRYQTMRGAYVPRRFGWDCHGLPIEHLIEQELNLNSKSDVESYGVSAFNAACRSSVLRYV 128
Query: 406 QLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSA 585
+ +R RLG D+D YKT+D + +A++ + L G K + +C C +A
Sbjct: 129 KEWQRTLTRLGRWVDFDNDYKTMDVCYMESVWWVVAQLWQRKLLYEGYKILPYCPRCATA 188
Query: 586 LAEAEIE---YTDKTSPMVDVAYP----------ALDPSALAAVFNATLPPDVQLAVPIW 726
L+ E+ Y D + P + V + A + A A+ +A+LP W
Sbjct: 189 LSNHELNLGGYQDVSDPAITVRFECTSVVPGSPAAREFCAAASWGSASLPAHTCFLA--W 246
Query: 727 TTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGS 906
TTTPWTLP + A+++GP + YVL+E R + G
Sbjct: 247 TTTPWTLPCNAALALGPQILYVLIEANDEHYILARSRLEFYYPDSSAYRVVWEK---RGE 303
Query: 907 AKGAAMEQHILAHPFYPDRTIPLLLGNH------------VSAEDGTGAVHTAPGHGQED 1050
+ + ++P + P + G+ VS EDGTG VH AP G++D
Sbjct: 304 HLAGIRYRPLFSYPVFGQGPDPSVQGDSEEGLFCTRVADFVSTEDGTGVVHVAPAFGEDD 363
Query: 1051 HQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXX 1230
++VF+ G+ P+DA + + GL + A+ I+
Sbjct: 364 YEVFKDAGISIQC------PLDAECRFTAEVADYQ-----GLFVKAADKAIIARVQKQGA 412
Query: 1231 XXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQW-GQAR 1407
++ H+YPHCWR +P+++RA WF+++E+ ++ L A + W P R
Sbjct: 413 LFRREQISHAYPHCWRCASPLIYRAVHSWFVAVEK--IKDKMLAANASICWQPSHIRDGR 470
Query: 1408 ILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAP---------HPRSAALMRQVADRVEQ 1560
+ DW ISR R WG P+P++ H GA + RS L+ + V
Sbjct: 471 FGKWLVCARDWAISRDRYWGNPLPIWRCVHCGATDCIGSRTQLYERSGMLLEDLHKHV-- 528
Query: 1561 QGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSGIT---------HEAVLLERGLPKP 1713
+D + ++ ++LD WF+SG A ER P
Sbjct: 529 --------VDMVTIPCACGSVMRRVPEVLDCWFESGAMPYAQQHYPFEHATDFERYFP-- 578
Query: 1714 ADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQD 1893
A EG DQ RGWF + + VA+ ++ C+ G + G+KMSK+L N +P +
Sbjct: 579 AHFISEGLDQTRGWFYTLTILAVALFERPAFENCIVTGLVLASDGKKMSKALRNYADPNE 638
Query: 1894 IIKTLGADILRLWI--ASTDYSNEMSLSQEILKR-TTDAYRRIRNTARFLL--GNLHGFD 2058
++ GAD LRL++ ++ ++++ S E +K + N+ F + N+ G D
Sbjct: 639 VMDRYGADALRLFLVRSAVVRADDLKYSDEGVKDILKTVIIPLWNSYSFYVTYANIDGID 698
Query: 2059 PTL---------HLVPLSDMI--ALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFC 2205
P + + L+ + LDRWI+ +L Q I A YD +++ I+++
Sbjct: 699 PPVCAKVDGMGQAVTRLATHLNNPLDRWILSLTEKLVQDIACALDAYDVSKVADPIVSYV 758
Query: 2206 SVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELW 2373
L + Y+ ++ R + D +R A +Y + V IAP++ F + +W
Sbjct: 759 D-QLNNWYIRRSRRRFWKSIND-EDKRCAYNTLYCVLKRCVLAIAPVVPFITESIW 812
>gi|1711635|sp|Q10765|SYI_MYCTU ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|1403506|emb|CAA98326| (Z74020) ileS [Mycobacterium
tuberculosis]
Length = 1041
Score = 274 bits (693), Expect = 3e-72
Identities = 220/787 (27%), Positives = 357/787 (44%), Gaps = 46/787 (5%)
Frame = +1
Query: 61 DLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
DLP E +L+ W RDD + A G P ++ +DGPP+ANG H GH + +KDI+
Sbjct: 15 DLPALELEVLDYWSRDDTFRASIARRDGAPEYVFYDGPPFANGLPHYGHLLTGYVKDIVP 74
Query: 241 KSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT----LDAVQFRQKCREYAAEQIQ 408
+ + + G+ GWD HGLP E+ +E++ G + + F CR
Sbjct: 75 RYRTMRGYKVERRFGWDTHGLPAELEVERQLGITDKSQIEAMGIAAFNDACRASVLRYTD 134
Query: 409 LQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSAL 588
+ R D+D YKTLD + I A ++ DKG G + + +C+ + L
Sbjct: 135 EWQAYVTRQARWVDFDNDYKTLDLAYMESVIWAFKQLWDKGLAYEGYRVLPYCWRDETPL 194
Query: 589 AEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLA---VPIWTTTPWTLPASL 759
+ E+ D DV DP+ PD L + +WTTTPWTLP++L
Sbjct: 195 SNHELRMDD------DVYQSRQDPAVTVGFKVVGGQPDNGLDGAYLLVWTTTPWTLPSNL 248
Query: 760 AISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAM--EQH 933
A++V P + YV V+ +G RR+ R E ++ G+ +GA + ++
Sbjct: 249 AVAVSPDITYVQVQ----AGDRRFVLAEARLAAYA--RELGEEPVVLGTYRGAELLGTRY 302
Query: 934 ILAHPFYPD--RTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELN 1107
+ ++ D +L G+ V+ +DGTG VH AP +G++D V + G+ A +
Sbjct: 303 LPPFAYFMDWPNAFQVLAGDFVTTDDGTGIVHMAPAYGEDDMVVAEAVGI------APVT 356
Query: 1108 PVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXX--------EMHHSY 1263
PVD++G + T + G H++ AN IV H Y
Sbjct: 357 PVDSKGRFDVTVADYQ-----GQHVFDANAQIVRDLKTQSGPAAVNGPVLIRHETYEHPY 411
Query: 1264 PHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQ-ARILSMIENRPDW 1440
PHCWR + P+++R+ WF+ + R ++ +TWYP+ + + ++ DW
Sbjct: 412 PHCWRCRNPLIYRSVSSWFVRVTD--FRDRMVELNQQITWYPEHVKDGQFGKWLQGARDW 469
Query: 1441 TISRQRTWGVPIPLFVHRHSGAPH---------------PRSAALMRQVADRVEQQGVDI 1575
+ISR R WG PIP++ P R A L R D + + D
Sbjct: 470 SISRNRYWGTPIPVWKSDDPAYPRIDVYGSLDELERDFGVRPANLHRPYIDELTRPNPDD 529
Query: 1576 WYSLDQTELLGTEADQYEKITDILDVWFDSG--------ITHEAVLLERGLPKPADLYLE 1731
T +I D+LDVWFDSG E + +G P D +E
Sbjct: 530 ----------PTGRSTMRRIPDVLDVWFDSGSMPYAQVHYPFENLDWFQG-HYPGDFIVE 578
Query: 1732 GADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLG 1911
Q RGWF + + A+ + +K C+ HG + G+KMSKSL N + ++ G
Sbjct: 579 YIGQTRGWFYTLHVLATALFDRPAFKTCVAHGIVLGFDGQKMSKSLRNYPDVTEVFDRDG 638
Query: 1912 ADILRLWIASTDY---SNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPL 2082
+D +R ++ ++ N + Q I + NT FL + P + +
Sbjct: 639 SDAMRWFLMASPILRGGNLIVTEQGIRDGVRQVLLPLWNTYSFLA----LYAPKVGTWRV 694
Query: 2083 SDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTM 2262
+ LDR+I+ + L+ + + YD + + F L + Y+ ++ R +
Sbjct: 695 DSVHVLDRYILAKLAVLRDDLSESMEVYDIPGACEHLRQFTEA-LTNWYVRRSRSRFWA- 752
Query: 2263 REDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHADNVLFTTW 2421
EDA + T + T R AP+L + +W L + +V T W
Sbjct: 753 -EDADAIDTLHTVLEVTT----RLAAPLLPLITEIIWRGLTRER--SVHLTDW 798
>gi|2688775 (AE001181) isoleucyl-tRNA synthetase (ileS) [Borrelia
burgdorferi]
Length = 1042
Score = 272 bits (687), Expect = 1e-71
Identities = 197/779 (25%), Positives = 345/779 (43%), Gaps = 27/779 (3%)
Frame = +1
Query: 55 RGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDI 234
+ + PK E IL+ W + + + +G F +DGPP+A G H GH V +KDI
Sbjct: 8 KANFPKIEEKILKFWNDNKIFEKSIKQREGCEEFTFYDGPPFATGLPHFGHFVPNTIKDI 67
Query: 235 IIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGV----TLDAVQFRQKCREYAAEQ 402
I + + + G GWD HGLP+E +EKK G G F ++CR+
Sbjct: 68 IPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKYEIENYGIENFNKECRKIVLRY 127
Query: 403 IQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGS 582
+ + RLG D++ YKT+D F + +KG + + + +
Sbjct: 128 TEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNLYEKGLIYESYYVLPYSPKLAT 187
Query: 583 ALAEAEI---EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPA 753
L+ E+ EY + P + + + D + V WTTTPWTLP+
Sbjct: 188 PLSNFEVNLGEYKEVNDPSLTIKFKIKDKNEYLLV---------------WTTTPWTLPS 232
Query: 754 SLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQH 933
+L I+VG ++Y + T Y I E +G E
Sbjct: 233 NLGIAVGQEIEYSKIFDKTKEEILILGSKKLNSYYDDENSYTIIEKFKGSKLEGIEYEPI 292
Query: 934 ILAHPFYPDR-TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNP 1110
D+ + ++V+ +DGTG VH AP G+ED+++ ++ H + ++P
Sbjct: 293 FNYFLEQKDKGAFKVHTADYVTTDDGTGIVHIAP-FGEEDYRILKK-----HTNVDIIDP 346
Query: 1111 VDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTP 1290
+DA + F GL + A+ I++ H YP C+R P
Sbjct: 347 LDAECKFTNQVKDFK-----GLFVKDADKKIIENLKLRNFLFKRENYLHRYPFCYRTNCP 401
Query: 1291 IVFRATPQWFISMEQAALRSAALKAITHVTWYP-QWGQARILSMIENRPDWTISRQRTWG 1467
I++R WF+++E+ +++ L+ + W P + R +EN DW ISR R WG
Sbjct: 402 IIYRPISSWFVNVEK--IKTKLLEVNEKINWMPAHLKKGRFGKWLENAKDWAISRNRFWG 459
Query: 1468 VPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYS--LDQTELLGTEADQYEKITD 1641
PIP+++ +G + ++ + + Q ++ + +D+ + ++ + ++
Sbjct: 460 NPIPIWICSKTGK---KICIGSKKELENLSGQKIEDLHKDQIDKITWPSKDGGKFIRTSE 516
Query: 1642 ILDVWFDSGI-----THEAVLLERGLPK--PADLYLEGADQHRGWFQSSLLTGVAMDNAA 1800
+LD WF+SG H E PAD EG DQ RGWF + + G A+
Sbjct: 517 VLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLTILGTALFENT 576
Query: 1801 PYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEI 1980
+K + +G + GRKMSKS N +P +I T GAD LRL++ + + +
Sbjct: 577 AFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPV-----VKADD 631
Query: 1981 LKRTTDAYRRIRNTARFLLGNLHGFDPTLHLV---------PLSDMIALDRWIVHRAFEL 2133
LK + + R + + N + F T ++ L+ LD+WI+ L
Sbjct: 632 LKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIISELESL 691
Query: 2134 QQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHL 2313
++ + +Y+ + ++++L F L + Y+ ++ R + D + A +Y+
Sbjct: 692 KKILNTEIDKYNLTKSIESLLEFID-KLNNWYIRRSRRRFWKSEND-KDKNDAYETLYYA 749
Query: 2314 TAAFVRWIAPILSFTADELWSYLPGD 2391
+ +AP + F +E++ L D
Sbjct: 750 IKTLMILLAPFIPFITEEIYQNLKTD 775
>gi|2501014|sp|Q94425|SYI_CIOIN PROBABLE ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|1638826|emb|CAB02584| (Z80904) COS1.1 [Ciona
intestinalis]
Length = 413
Score = 269 bits (680), Expect = 9e-71
Identities = 151/390 (38%), Positives = 228/390 (57%), Gaps = 13/390 (3%)
Frame = +1
Query: 934 ILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPV 1113
I HP Y +RT+ ++ + + GTG VH AP HG +D + Q++ L S V
Sbjct: 3 ICRHPIYLERTVRMIGSDIANTSKGTGVVHIAPAHGMDDFGIGQKHNLSTESS------V 56
Query: 1114 DARGVYLPTTPPFSELTLAGLHIWKA-NPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTP 1290
++ G ++ P L G I+ + N +V+ + HSYP+ WR K P
Sbjct: 57 NSDGEFMANIAP----NLEGKFIFTSGNEAVVEMLKEEMNLFHEHDYKHSYPYDWRTKQP 112
Query: 1291 IVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGV 1470
I + QWF+ + A L + A AI+ +T YP G + +L+ ++ R W ISRQR WG+
Sbjct: 113 IFVHTSNQWFV--DTAMLANKAEAAISGITTYPDNGISSMLNRLQLRSYWCISRQRAWGL 170
Query: 1471 PIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTE--ADQYEKITDI 1644
PIP+F H+ SG + + V+ V + G DIW+ + TELL T+ AD+YE+ DI
Sbjct: 171 PIPVFYHKESGELLLNESTIQHLVS-LVLKHGADIWW--EGTELLPTQYNADEYERGRDI 227
Query: 1645 LDVWFDSGITHEAVLLE-RGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLT 1821
LD+WFDSG++ + VL + + AD Y+EG DQ+ GWFQSSLLT V + APYK +
Sbjct: 228 LDIWFDSGVSWDCVLRDSKNRTTQADFYIEGKDQYGGWFQSSLLTSVGLQGVAPYKNLMV 287
Query: 1822 HGFTVDQHGRKMSKSLGNGIEPQDIIK---------TLGADILRLWIASTDYSNEMSLSQ 1974
HGF +D+ G+KMSKS+GN ++P + GAD LR W+A ++ ++ +S
Sbjct: 288 HGFVLDEKGQKMSKSIGNVVDPMVLTNGGKNPQRDPAYGADALRWWVAESNVHQDVHIST 347
Query: 1975 EILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALD 2103
I+K ++ ++IRN+ RF+LGNL+ FD + +VP M+ LD
Sbjct: 348 TIIKSAAESVQKIRNSVRFMLGNLNEFD-KMKIVPTPAMLILD 389
>gi|6319395|ref|NP_009477.1|ILS1| cytoplasmic isoleucyl-tRNA
synthetase; Ils1p >gi|135134|sp|P09436|SYIC_YEAST
ISOLEUCYL-TRNA SYNTHETASE, CYTOPLASMIC (ISOLEUCINE--TRNA
LIGASE) (ILERS) >gi|68524|pir||SYBYI4 isoleucine--tRNA
ligase (EC 6.1.1.5) - yeast (Saccharomyces cerevisiae)
>gi|3820|emb|CAA30733| (X07886) ILSI (AA 1-1072)
[Saccharomyces cerevisiae] >gi|498991|emb|CAA56034|
(X79489) ILS1 protein [Saccharomyces cerevisiae]
>gi|536123|emb|CAA84898| (Z35838) ORF YBL076c
[Saccharomyces cerevisiae]
Length = 1072
Score = 269 bits (680), Expect = 9e-71
Identities = 220/773 (28%), Positives = 345/773 (44%), Gaps = 47/773 (6%)
Frame = +1
Query: 67 PKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKS 246
PK E +L W+ D + K +P F DGPP+A G H GH + +KDI+ +
Sbjct: 11 PKEEEKVLSLWDEIDAFHTSLELTKDKPEFSFFDGPPFATGTPHYGHILASTIKDIVPRY 70
Query: 247 KHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVG----VTLDAVQFRQKCREYAAEQIQLQ 414
+ G GWD HG+PIE I+KK G G + +CR
Sbjct: 71 ATMTGHHVERRFGWDTHGVPIEHIIDKKLGITGKDDVFKYGLENYNNECRSIVMTYASDW 130
Query: 415 RRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALA- 591
R+ RLG D+D YKT+ F A ++ +KG + RG K + + + L+
Sbjct: 131 RKTIGRLGRWIDFDNDYKTMYPSFMESTWWAFKQLHEKGQVYRGFKVMPYSTGLTTPLSN 190
Query: 592 -EAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAIS 768
EA+ Y D P V + FN QL WTTTPWTLP++L++
Sbjct: 191 FEAQQNYKDVNDPAVTIG------------FNVIGQEKTQLVA--WTTTPWTLPSNLSLC 236
Query: 769 VGPTLDYVLVEGPTHSGQRRWXXXXXXXXXX-----XXXRYGIAELLIHGSAKGAAMEQ- 930
V +YV + T R+ +Y I E + G E
Sbjct: 237 VNADFEYVKIYDETRD---RYFILLESLIKTLYKKPKNEKYKIVEKIKGSDLVGLKYEPL 293
Query: 931 -HILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELN 1107
A F+ + ++ ++V+++ GTG VH AP G+ED+ + G+++ S N
Sbjct: 294 FPYFAEQFH-ETAFRVISDDYVTSDSGTGIVHNAPAFGEEDNAACLKNGVISEDSVLP-N 351
Query: 1108 PVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKT 1287
+D G + P F G+++ A+ LI+ ++ HSYP CWR T
Sbjct: 352 AIDDLGRFTKDVPDFE-----GVYVKDADKLIIKYLTNTGNLLLASQIRHSYPFCWRSDT 406
Query: 1288 PIVFRATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQRTW 1464
P+++R+ P WF+ ++ + L ++ W P + R + I N DW +SR R W
Sbjct: 407 PLLYRSVPAWFVRVKN--IVPQMLDSVMKSHWVPNTIKEKRFANWIANARDWNVSRNRYW 464
Query: 1465 GVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSL--DQTELLGTEADQ----Y 1626
G PIPL+V + + + + E GV L D + L + Q
Sbjct: 465 GTPIPLWV-----SDDFEEVVCVGSIKELEELTGVRNITDLHRDVIDKLTIPSKQGKGDL 519
Query: 1627 EKITDILDVWFDSG----------ITHEAVLLERGLPKPADLYLEGADQHRGWFQSSLLT 1776
++I ++ D WF+SG + ER PA+ EG DQ RGWF + +
Sbjct: 520 KRIEEVFDCWFESGSMPYASQHYPFENTEKFDER---VPANFISEGLDQTRGWFYTLAVL 576
Query: 1777 GVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSN 1956
G + + PYK + G + GRKMSKSL N +P ++ GAD LRL++ N
Sbjct: 577 GTHLFGSVPYKNVIVSGIVLAADGRKMSKSLKNYPDPSIVLNKYGADALRLYLI-----N 631
Query: 1957 EMSLSQEILKRTTDAYRRI--------RNTARFLLGNLHGFDPTLHL-VPLSDMI----A 2097
L E LK + + + N+ +FL G + ++ D +
Sbjct: 632 SPVLKAESLKFKEEGVKEVVSKVLLPWWNSFKFLDGQIALLKKMSNIDFQYDDSVKSDNV 691
Query: 2098 LDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAP 2277
+DRWI+ L Q I +Y +V +LNF +L + Y+ + RL
Sbjct: 692 MDRWILASMQSLVQFIHEEMGQYKLYTVVPKLLNFID-ELTNWYIRFNRRRL-KGENGVE 749
Query: 2278 GRRSAQTAMYHLTAAFVRWIAPILSFTADELW----SYLP 2385
A +++ FVR +AP F ++ ++ Y+P
Sbjct: 750 DCLKALNSLFDALFTFVRAMAPFTPFLSESIYLRLKEYIP 789
>gi|2501013|sp|Q21926|SYI_CAEEL PROBABLE ISOLEUCYL-TRNA SYNTHETASE,
CYTOPLASMIC (ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|3879120|emb|CAA94369.1| (Z70310) predicted using
Genefinder; Similarity to Human isoleucyl-tRNA synthetase
(SW:SYI_HUMAN); cDNA EST EMBL:D33089 comes from this
gene; cDNA EST EMBL:D33388 comes from this gene; cDNA EST
EMBL:D34131 comes from this gen...
Length = 1141
Score = 266 bits (674), Expect = 5e-70
Identities = 212/768 (27%), Positives = 341/768 (43%), Gaps = 34/768 (4%)
Frame = +1
Query: 70 KREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSK 249
+ E + ++W+ ++ + + +K RP F +DGPP+A G H GH + +KD++ +
Sbjct: 15 REEDKVAQKWQDENTFQRSVELSKDRPHFTFYDGPPFATGLPHYGHMLTSTIKDVVGRWA 74
Query: 250 HLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVG----VTLDAVQFRQKCREYAAEQIQLQR 417
H +G GWD HGLP+E I+K G G + + + +CR+
Sbjct: 75 HQNGHYVERRFGWDTHGLPVEYEIDKTLGISGPQDVMKMGIANYNNECRKIVMRYSGEWE 134
Query: 418 RDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALA-- 591
+ RLG D+ YKTL F A +++ KG + +G K + + C + L+
Sbjct: 135 KTMGRLGRWVDFKHDYKTLYPWFMESVWWAFSELHKKGLVYKGVKVMPFSTACSTPLSNF 194
Query: 592 EAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISV 771
EA Y D P V V + LD P+ QL WTTTPWTLP++LA+ V
Sbjct: 195 EAGQNYKDVVDPAVFVGFKLLDC------------PNRQLVA--WTTTPWTLPSNLALVV 240
Query: 772 GPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHI--LAH 945
P + YV+ + T + + + E L K E A+
Sbjct: 241 HPDMLYVVTKDKTTGIE--YVVLEERLGELKNDNLEVIEKLAGSQLKDLRYEPLFPYFAY 298
Query: 946 PFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARG 1125
+L V+++ GTG VH AP G+ D QV G++ + PVD G
Sbjct: 299 MREERNAFRVLNDTFVTSDSGTGVVHQAPYFGEIDFQVCVANGVIAK-DQKMICPVDESG 357
Query: 1126 VYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRA 1305
Y P + G+++ A+ LI+ E+ HSYP CWR TP++++A
Sbjct: 358 KYTSEVPDYQ-----GVYVKDADKLIIKRLKEMGNLVRQAEVKHSYPFCWRSDTPLLYKA 412
Query: 1306 TPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQRTWGVPIPL 1482
P WFI++E R A T+ W P + + R + + + DW +SR R WG PI L
Sbjct: 413 VPSWFINVETLIPRLLANNDETY--WVPAFVKEKRFANWLRDARDWAVSRNRFWGTPINL 470
Query: 1483 FVHRHSGAPHPRSAALMRQVADRVEQQGVDIW----YSLDQTELLGTEA-DQYEKITDIL 1647
+V + +A+ E G I S+D + ++++++
Sbjct: 471 WVSEDG-----EEVVCVGSIAELEELSGQKITDLHRESVDDVTIPSRSGRGVLKRVSEVF 525
Query: 1648 DVWFDSGITHEAV---------LLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAA 1800
D WF+SG A + E P AD EG DQ RGWF + L+ A+ N
Sbjct: 526 DCWFESGSMPYAQNHYPFENRKIFEDNFP--ADFIAEGIDQTRGWFYTLLVLSTALFNKP 583
Query: 1801 PYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSL---S 1971
P+K + +G + G KMSKS N +P I+ GAD LRL++ ++ +L
Sbjct: 584 PFKNLICNGLVLASDGAKMSKSKKNYPDPMLIVNKYGADALRLYLINSPVVRGENLRFRE 643
Query: 1972 QEILKRTTDAYRRIRNTARFLLGNLHG--------FDPTLHLVPLSDMIALDRWIVHRAF 2127
+ + D + N RF + N+ FD +H+ + +DRWI
Sbjct: 644 EGVRDLLKDVFLPWFNAYRFFVQNVQAYEHETGNVFDMNVHVASEN---VMDRWIESFTN 700
Query: 2128 ELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMY 2307
L ++ Y +V + F L ++Y+ + + R+ + A A+
Sbjct: 701 SLVAFVRKEMDSYRLYAVVGPLTKFFDT-LTNIYIRLNRKRV-KGDNGLHEQHHALAALG 758
Query: 2308 HLTAAFVRWIAPILSFTADELW 2373
+ VR +AP F + +W
Sbjct: 759 RVLILIVRLMAPFTPFFCEYIW 780
>gi|4538961|emb|CAB39785.1| (AL049488) isoleucine-tRNA ligase-like
protein [Arabidopsis thaliana]
Length = 1254
Score = 266 bits (673), Expect = 6e-70
Identities = 212/772 (27%), Positives = 352/772 (45%), Gaps = 71/772 (9%)
Frame = +1
Query: 67 PKREPAILERW-ERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIK 243
P++E +L W E D F QL+ + P ++ +DGPP+A G H GH + +KDI+ +
Sbjct: 13 PRQEEDVLSFWTEIDAFKTQLK-RTENLPEYIFYDGPPFATGLPHYGHILAGTIKDIVTR 71
Query: 244 SKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG--------KVGVTLDAVQFRQKCREYAAE 399
+ + G GWDCHGLP+E I++K K+G+ ++ ++CR
Sbjct: 72 YQTMTGHHVTRRFGWDCHGLPVENEIDRKLNIKRRDEVIKMGID----KYNEECRSIVTR 127
Query: 400 QIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCG 579
+ + R G D+ YKT+D F +++ +K + RG K + + C
Sbjct: 128 YVAEWEKVITRCGRWIDFKNDYKTMDLPFMESVWWVFSQLWEKNLVYRGFKVMPYSTGCK 187
Query: 580 SALA--EAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPA 753
+ L+ EA Y + P + V +P + AA WTTTPWTLP+
Sbjct: 188 TPLSNFEAGQNYKEVPDPEIMVTFPVIGDQDNAAFV-------------AWTTTPWTLPS 234
Query: 754 SLAISVGPTLDYVLVE-----------------------------GPTHSGQRRWXXXXX 846
+LA+ V YV V GP ++
Sbjct: 235 NLALCVNAKFVYVKVRNKNTGKVYIVAESRLSALPTDKPKAKLSNGPAGDTKKANPKAKG 294
Query: 847 XXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHT 1026
Y + E S G E + ++ ++V+ + GTG VH
Sbjct: 295 AKPESAADSYEVLEKFNGASLVGKKYEPLFDYFSDFSSEAFRVVADDYVTDDSGTGIVHC 354
Query: 1027 APGHGQEDHQVFQQYGLLNHYSAAELN---PVDARGVYLPTTPPFSELTLAGLHIWKANP 1197
AP G++D++V LLN N VD G++ FS G ++ A+
Sbjct: 355 APAFGEDDYRVC----LLNKIIKKGENLVVAVDDDGLFTERITHFS-----GRYVKDADK 405
Query: 1198 LIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHV 1377
I++ HSYP CWR TP+++RA P WF+ +EQ L+ LK+
Sbjct: 406 DIIEAVKAKGRLVKTGSFTHSYPFCWRSDTPLIYRAVPSWFVRVEQ--LKEKLLKSNEQT 463
Query: 1378 TWYPQWGQ-ARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRV 1554
W P + + R + +EN DW ISR R WG P+P+++ + +M V
Sbjct: 464 EWVPGYVKDKRFHNWLENARDWAISRSRFWGTPLPIWI-----SDDGEEVVIMDSVEKLE 518
Query: 1555 EQQGVDIW----YSLDQTELLGTEADQY---EKITDILDVWFDSGITHEAV--------- 1686
+ GV ++ + +D + + D++ ++ D+ D WF+SG A
Sbjct: 519 KLSGVKVFDLHRHHIDHITIPSSRGDEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENKE 578
Query: 1687 LLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKS 1866
L E+ P D EG DQ RGWF + ++ A+ +K + +G + + G+KM+K
Sbjct: 579 LFEKNFP--GDFVAEGLDQTRGWFYTLMVLSTALFEKPAFKNLICNGLVLAEDGKKMAKK 636
Query: 1867 LGNGIEPQDIIKTLGADILRLWIASTDYSNEMSL---SQEILKRTTDAYRRIRNTARFLL 2037
L N P ++I GAD +RL++ ++ L + +L D + N RFL+
Sbjct: 637 LRNYPPPLEVIDEYGADAVRLYLINSPVVRAEPLRFKKEGVLGVVKDVFLPWYNAYRFLV 696
Query: 2038 GNLH--------GFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTI 2193
N F PT L + LD+WI L + ++ Y +V +
Sbjct: 697 QNAKRLETEGGVPFVPT-DLATIQSANILDQWIHSATQSLVRFVREEMDAYRLYTVVPRL 755
Query: 2194 LNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELW 2373
L F +L ++Y+ + RL R +A + ++++ + +AP F + L+
Sbjct: 756 LKFLD-NLTNIYVRFNRKRL-KGRTGEDDCHTALSTLFNVLLTSCKVMAPFTPFFTETLY 813
Query: 2374 SYL 2382
L
Sbjct: 814 QNL 816
>gi|1174516|sp|P41368|SYIP_STAAU ISOLEUCYL-TRNA SYNTHETASE, MUPIROCIN
RESISTANT (ISOLEUCINE--TRNA LIGASE) (ILERS) (MUPIROCIN
RESISTANCE PROTEIN) >gi|581558|emb|CAA53189| (X75439)
isoleucyl tRNA synthetase [Staphylococcus aureus]
Length = 1024
Score = 265 bits (671), Expect = 1e-69
Identities = 202/764 (26%), Positives = 346/764 (44%), Gaps = 24/764 (3%)
Frame = +1
Query: 97 WERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPY 276
W + + + KG+ F+ +DGPP ANG H GH + +++KD++ + K + GF
Sbjct: 16 WNTQKIFKKSIDNRKGQESFVFYDGPPTANGLPHAGHVLGRVIKDLVARLKTMQGFYVER 75
Query: 277 IPGWDCHGLPIEIAIEKKYGKVGVT----LDAVQFRQKCREYAAEQIQLQRRDF-KRLGI 441
GWD HGLP+E+ +EKK G G F +C++ + + + RDF K LG
Sbjct: 76 KAGWDTHGLPVELEVEKKIGIKGKQDIEKYGIENFINECKK-SVFNYEKEWRDFSKDLGY 134
Query: 442 IGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKT 621
D D+PY TL+ + L+ KG L +G K +C +AL+ E+ K
Sbjct: 135 WVDMDSPYITLENNYIESVWNILSTFHKKGLLYKGHKVTPYCTHDQTALSSHEVAQGYK- 193
Query: 622 SPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVE 801
+ L+AV L WTTTPWTLPA++A+++ L+Y +
Sbjct: 194 -----------NVKDLSAVVKFQLTNSKDTYFLSWTTTPWTLPANVALAINKDLNYSKIR 242
Query: 802 GPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIP--- 972
+ +Y I + G+ + PF D +
Sbjct: 243 VENEY----YILATDLINSIITEKYEIIDTF-----SGSNLINLKYIPPFESDGLVNAYY 293
Query: 973 LLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPF 1152
++ G V+ +GTG VH AP HG++D+Q+ + L LN + GVY P
Sbjct: 294 VVDGEFVTNSEGTGIVHIAPAHGEDDYQLVLERDL------DFLNVITREGVYNDRFPE- 346
Query: 1153 SELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISME 1332
L G ++ I+ + H+YPHCWR P+++ A WFI
Sbjct: 347 ----LVGNKAKNSDIEIIKLLSKKQLLYKKQKYEHNYPHCWRCGNPLIYYAMEGWFIKTT 402
Query: 1333 QAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAP 1509
++ + ++ W+P + R+ + +EN DW I R R WG P+ +++
Sbjct: 403 N--FKNEIINNNNNIEWFPSHIKEGRMGNFLENMVDWNIGRNRYWGTPLNVWICNDCNHE 460
Query: 1510 HPRSAA--LMRQVADRVEQQGVDIWYSLDQTELLGTEAD-QYEKITDILDVWFDSG---- 1668
+ S+ L +++++ +D L + + + ++ +++DVWFDSG
Sbjct: 461 YAPSSIKDLQNNSINKIDEDIELHRPYVDNITLSCPKCNGKMSRVEEVIDVWFDSGSMPF 520
Query: 1669 ITHEAVLLERGLPK---PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVD 1839
H + + PAD EG DQ RGWF S L+ + + YK+ L+ G +D
Sbjct: 521 AQHHYPFDNQKIFNQHFPADFIAEGVDQTRGWFYSLLVISTILKGKSSYKRALSLGHILD 580
Query: 1840 QHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYS--NEMSLSQEILKRTTDAY-RR 2010
+G+KMSKS GN I P ++I GAD LR W +D + N S+ I+ +T +
Sbjct: 581 SNGKKMSKSKGNVINPTELINKYGADSLR-WALISDSAPWNNKRFSENIVAQTKSKFIDT 639
Query: 2011 IRNTARF--LLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIV 2184
+ N +F + + ++P + + LD W + R L + YDF
Sbjct: 640 LDNIYKFYNMYNKIDHYNPNNEITKSRN--TLDNWALSRLNTLIKESNIYVNNYDFTSAA 697
Query: 2185 QTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTAD 2364
+ I + + + + Y+ ++ R + + + ++ A +Y + R +AP + F ++
Sbjct: 698 RLINEYTNT-ISNWYIGDSRGRFWE-QGISNDKKDAYNTLYEILTTLSRLVAPFVPFISE 755
Query: 2365 ELWSYLPG 2388
++ L G
Sbjct: 756 KIHYNLTG 763
>gi|1174522|sp|P46215|SYI_SULAC ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|598398 (L37106)
transfer RNA-Ile synthetase [Sulfolobus acidocaldarius]
Length = 552
Score = 265 bits (671), Expect = 1e-69
Identities = 186/561 (33%), Positives = 274/561 (48%), Gaps = 33/561 (5%)
Frame = +1
Query: 289 DCHGLPIEIAIEKKYG---------KVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGI 441
D HGLPIE+ EK+ G KVGV F KC+E+A + ++F+ LGI
Sbjct: 1 DTHGLPIEVETEKRLGIKSKAEIIEKVGVD----NFISKCKEFAVNNSKSLTQNFRNLGI 56
Query: 442 IGDWDAPYKTLDFRFEADEIR---ALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI-EY 609
DW+ PY F F D I A+ K + +G L +G +HWC C + LA+ E+ EY
Sbjct: 57 FMDWENPY----FTFNNDYISNSWAVIKSIRRGLLYKGVHVLHWCSRCETTLADYEVSEY 112
Query: 610 TDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDY 789
D P + V F P+ L IWTTTPWTLPA++ + + +Y
Sbjct: 113 RDLEDPSIYVK------------FRVKGEPNRYLV--IWTTTPWTLPANVFVMINKDFEY 158
Query: 790 VLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTI 969
V I E I KG + HP +
Sbjct: 159 ADVRVGDEI-----LVIAKDRVKELMKEARIKEYKILRVYKGEELLGLEYEHPLADIVSA 213
Query: 970 PLLLGNH---------VSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDAR 1122
+ NH V+ ++GTG VH+APGHG D ++ ++Y + + V+ +
Sbjct: 214 QSKINNHHKVLDGGEAVTLQEGTGLVHSAPGHGDVDFEIGKKYDM------PVVMLVNDK 267
Query: 1123 GVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFR 1302
G + + + AG ++ A+ I+ ++ H YP CWR KTP++ R
Sbjct: 268 GEFTQDSGKY-----AGKYVRSASEEIISDLKQRSALLHASKIVHRYPVCWRCKTPLILR 322
Query: 1303 ATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPL 1482
A QWFI++ + L+ + I V W P WG+ RI +M++ DW ISRQR WG P+P+
Sbjct: 323 AIEQWFIAVSK--LKDHLMGEIDRVRWIPDWGKTRIGNMVKEVRDWVISRQRFWGTPLPI 380
Query: 1483 FVHRHS------GAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDI 1644
+V + G + QV + + +D LD + G Q +I+D+
Sbjct: 381 WVCSNCQNIIVVGGVDELGKIPINQVPQDLHRPWIDS-VVLDVKNVEG----QARRISDV 435
Query: 1645 LDVWFDSGITHEAVLLERGLPK-----PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYK 1809
DVWFDSG+ A L + + P DL LEG DQ RGWF S L TGV + + APY+
Sbjct: 436 ADVWFDSGVAFFASLGQDWRKRWSELGPVDLVLEGHDQLRGWFFSLLRTGVILMDKAPYE 495
Query: 1810 QCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLS 1971
L HGF +D+ GR+M KS GN +EP ++ G +++ + +MS S
Sbjct: 496 AVLVHGFMLDEQGREMHKSSGNYVEPSQVVSKYGQRYVKIMVTLEIPHGKMSKS 549
>gi|549028|sp|P36422|SYI_TETTH ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|283498|pir||A42399
isoleucyl-tRNA synthetase, ileRS - Tetrahymena
thermophila (SGC5) >gi|161801 (M30942) transfer RNA-Ile
synthetase [Tetrahymena thermophila]
Length = 1081
Score = 264 bits (668), Expect = 2e-69
Identities = 219/774 (28%), Positives = 347/774 (44%), Gaps = 42/774 (5%)
Frame = +1
Query: 61 DLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
D PK E IL+ W+ + + Q K P F +DGPP+A G H G+ + +KD++
Sbjct: 15 DFPKEEENILKFWDEINAFKQQLEKTKDCPPFTFYDGPPFATGLPHYGNLLAGTIKDVVC 74
Query: 241 KSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG--------KVGVTLDAVQFRQKCREYAA 396
+ +G GWDCHGLP+E I+KK G K+GV ++ +CR
Sbjct: 75 RYASQNGKYVERRFGWDCHGLPVEYEIDKKLGITNRQEVLKMGVD----KYNAECRSIVM 130
Query: 397 EQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDC 576
Q R R G D+D YKTLD +F ++ DKG + RG K + + C
Sbjct: 131 RYAQEWRSIVNRFGRWVDFDNDYKTLDLKFMESVWWVFKQMFDKGLVYRGCKVMPYSNGC 190
Query: 577 GSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPAS 756
+ L+ E T + VD DPS A A P +A WTTTPWTLP++
Sbjct: 191 ATVLSNFE---TQQNYKEVD------DPSLFIAFKTAEDPKTKFIA---WTTTPWTLPSN 238
Query: 757 LAISVGPTLDYV-LVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQH 933
LA+ + DYV +++ T Y I E G E
Sbjct: 239 LALVINKDFDYVKVLDAKTQEHYILAECRLPELYKKDKDGYKILEKFKGSELVGREYE-- 296
Query: 934 ILAHPFYP-------DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYS 1092
P +P D +L G+ V+A+ GTG VH APG G +D++V ++
Sbjct: 297 ----PLFPYFLSRKQDGCFRILAGDFVTADAGTGIVHCAPGFGDDDYKVSVANNIIKPDD 352
Query: 1093 AAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHC 1272
PVD G + F AG++I +A+ LI H+YP C
Sbjct: 353 PPV--PVDENGHFTNVVSDF-----AGVYIKEADKLIRKNLKERGLLLVDSSFKHNYPFC 405
Query: 1273 WRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQ-ARILSMIENRPDWTIS 1449
WR TP++++A WFI + AL+ L W P++ Q R + ++N DW S
Sbjct: 406 WRSDTPLIYKAVHCWFIKV--TALKDDLLANNKKAYWVPKFAQEGRFNNWLQNVSDWCFS 463
Query: 1450 RQRTWGVPIPLFVHR-HSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQY 1626
R R WG PIP++V S ++++ E + + T
Sbjct: 464 RSRFWGNPIPIWVSEDFEEVVCIGSVEELKKLTGATEITDLHKDFIDHLTIPSQKGKGVL 523
Query: 1627 EKITDILDVWFDSGIT------HEAVLLERGLPK--PADLYLEGADQHRGWFQSSLLTGV 1782
+I ++ D WF+SG + + E K PAD EG DQ RGWF + +
Sbjct: 524 RRIDEVFDCWFESGSMPYGQQHYPFSMNEEEFSKRFPADFIGEGIDQTRGWFYTLNVIST 583
Query: 1783 AMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDY--SN 1956
A+ N+ PYK + +G + G+KMSKS N +P I D +RL++ ++ +
Sbjct: 584 ALRNSNPYKNLIVNGIVLAADGKKMSKSKKNYDDPLLIASKYSVDAIRLYMINSPLVRAE 643
Query: 1957 EMSLSQE-ILKRTTDAYRRIRNTARFLL----------GNLHGFDPTLHLVPLSDMIALD 2103
EMS E + D + N +FL+ G + F+ L + D
Sbjct: 644 EMSFKSEGVFAVKKDIFLPWYNAYKFLIQSITRWELATGKDYMFNEQLSVDTTKLTNPTD 703
Query: 2104 RWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRL---YTMREDA 2274
RWI+ L ++ +Y +V +++F +L + Y+ + ++RL Y + E
Sbjct: 704 RWIIISCQNLINYVRIEMEKYHLYNVVPRLIHFLE-NLTNWYIRLNRNRLKGDYGLEE-- 760
Query: 2275 PGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
+ ++ ++++ ++P++ F + + L
Sbjct: 761 --QETSLNVLFNVILNSTILMSPLVPFITESFYQNL 794
>gi|3122906|sp|O26861|SYV_METTH VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|2621857 (AE000855) valyl-tRNA
synthetase [Methanobacterium thermoautotrophicum]
Length = 897
Score = 263 bits (664), Expect = 7e-69
Identities = 198/771 (25%), Positives = 330/771 (42%), Gaps = 10/771 (1%)
Frame = +1
Query: 70 KREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSK 249
K E ++W+ +D Y + + K P +++ PPY G IH+GH +N + DII + K
Sbjct: 33 KNEVKWQKKWQEEDIYRFIGSGTK--PRYIIDTPPPYPTGSIHMGHVLNWVYMDIIARFK 90
Query: 250 HLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFK 429
+ GFD + GWDCHGLP E+ +E+ + + +FR+ C E E I++ + +
Sbjct: 91 RMRGFDVLFPQGWDCHGLPTEVKVEETHNIKKSDVSREEFRRLCVELTQENIRMMKEQMQ 150
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEY 609
RLG DW+ + T+ + + ++ G + +G PV+WC C +A+A AE+EY
Sbjct: 151 RLGFSQDWNHEFVTMTPEYMRRTQLSFLRMYRDGLIYQGVHPVNWCPRCETAIAFAEVEY 210
Query: 610 TDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDY 789
+ + + V +P + I TT P + A +A+ V P
Sbjct: 211 IENETNLNYVRFPV---------------EGADEHITIATTRPELMAACVAVVVHPD--- 252
Query: 790 VLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTI 969
+ E ++ P + + +
Sbjct: 253 --------------------------------------DERFREFEDKLIEVPLFGQK-V 273
Query: 970 PLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPP 1149
L+ V E GTGAV + D ++GL ++ +D RG
Sbjct: 274 KLIKDPEVDPEFGTGAVMVCTFGDKTDVSWVNRHGL------DVIDAIDERGYMTEAAGK 327
Query: 1150 FSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISM 1329
+ LT+A + IV+ + + CWR KTPI QWF+++
Sbjct: 328 YQGLTIA-----ECKEKIVEDLENEGFLLKKEPVRQNVGTCWRCKTPIEILVKKQWFVAV 382
Query: 1330 EQAALRSAALKAITHVTWYPQWGQARILSMIENRP-DWTISRQRTWGVPIPLFVHRHSGA 1506
++ L +A + W P + R+L+ + DW ISRQR + PIP++ G
Sbjct: 383 KK--LIPQVREAAEEMKWVPGHMKTRLLNWTGSMDWDWCISRQRIFATPIPVWYCSECGR 440
Query: 1507 PHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSGITHEAV 1686
H ++ R G I TE +G E D+LD W DS I+ +V
Sbjct: 441 VHVADEEMLPVDPTR---DGPGITCECGSTEFIGEE--------DVLDTWMDSSISPLSV 489
Query: 1687 LLERGLPK-------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQH 1845
G P PADL +G D R W ++L +A+ P+ + + +G +
Sbjct: 490 A---GWPDESYRELFPADLRPQGHDIIRTWAFYTILRCMALTGEKPFSEIVINGMVFGED 546
Query: 1846 GRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIRNTA 2025
G KMSKS GN I P+++++ GAD LRLW A + +++ + + +K R+ N
Sbjct: 547 GHKMSKSRGNVIAPEEVLEDYGADALRLWAAGSVPGSDVPFAWKDVKYGYKFLRKFWNAF 606
Query: 2026 RFLLGNLHGFDPTLHLV--PLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILN 2199
RF+ ++HL P + +DRWI+ R L + + Y+FA V +
Sbjct: 607 RFI---------SIHLTENPEVEARPMDRWILSRLMNLVAEVTESLDDYNFAAAVNRVQT 657
Query: 2200 FCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSY 2379
F D Y++ K RLY+ ED R +AQ + + +R +AP+ +E+ +
Sbjct: 658 FIWHDFCDEYIEAVKYRLYS-DEDPESRMAAQNTLRMVLDTCLRLLAPVAPHFTEEVHQH 716
Query: 2380 L 2382
+
Sbjct: 717 V 717
>gi|171768 (M19992) isoleucyl-tRNA synthetase (EC 6.1.1.5)
[Saccharomyces cerevisiae]
Length = 1073
Score = 258 bits (652), Expect = 2e-67
Identities = 220/773 (28%), Positives = 346/773 (44%), Gaps = 50/773 (6%)
Frame = +1
Query: 67 PKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKS 246
PK E +L W+ D + K +P F DGPP+A G H GH + +KDI+ +
Sbjct: 11 PKEEEKVLSLWDEIDAFHTSLELTKDKPEFSFFDGPPFATGTPHYGHILASTIKDIVPRY 70
Query: 247 KHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVG----VTLDAVQFRQKCREYAAEQIQLQ 414
+ G GWD HG+PIE I+KK G G + +CR
Sbjct: 71 ATMTGHHVERRFGWDTHGVPIEHIIDKKLGITGKDDVFKYGLENYNNECRSIVMTYASDW 130
Query: 415 RRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALA- 591
R+ RLG D+D YKT+ F A ++ +KG + RG K + + + L+
Sbjct: 131 RKTIGRLGRWIDFDNDYKTMYPSFMESTWWAFKQLHEKGQVYRGFKVMPYSTGLTTPLSN 190
Query: 592 -EAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAIS 768
EA+ Y D P V + FN QL WTTTPWTLP++L++
Sbjct: 191 FEAQQNYKDVNDPAVTIG------------FNVIGQEKTQLVA--WTTTPWTLPSNLSLC 236
Query: 769 VGPTLDYVLVEGPTHSGQRRWXXXXXXXXXX-----XXXRYGIAELLIHGSAKGAAMEQ- 930
V +YV + T R+ +Y I E + G E
Sbjct: 237 VNADFEYVKIYDETRD---RYFILLESLIKTLYKKPKNEKYKIVEKIKGSDLVGLKYEPL 293
Query: 931 -HILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELN 1107
A F+ + ++ ++V+++ GTG VH AP G+ED+ + G+++ S N
Sbjct: 294 FPYFAEQFH-ETAFRVISDDYVTSDSGTGIVHNAPAFGEEDNAACLKNGVISEDSVLP-N 351
Query: 1108 PVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKT 1287
+D G + P F G+++ A+ LI+ ++ HSYP CWR T
Sbjct: 352 AIDDLGRFTKDVPDFE-----GVYVKDADKLIIKYLTNTGNLLLASQIRHSYPFCWRSDT 406
Query: 1288 PIVFRATPQWFISMEQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQRTW 1464
P+++R+ P WF+ ++ + L ++ W P + R + I N DW +SR R W
Sbjct: 407 PLLYRSVPAWFVRVKN--IVPQMLDSVMKSHWVPNTIKEKRFANWIANARDWNVSRNRYW 464
Query: 1465 GVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSL--DQTELLGTEADQ----Y 1626
G PIPL+V + + + + E GV L D + L + Q
Sbjct: 465 GTPIPLWV-----SDDFEEVVCVGSIKELEELTGVRNITDLHRDVIDKLTIPSKQGKGDL 519
Query: 1627 EKITDILDVWFDSG----------ITHEAVLLERGLPKPADLYLEGADQHRGWFQSSLLT 1776
++I ++ D WF+SG + ER PA+ EG DQ RGWF + +
Sbjct: 520 KRIEEVFDCWFESGSMPYASQHYPFENTEKFEER---VPANFISEGLDQTRGWFYTLAVL 576
Query: 1777 GVAMDNAAPYKQ-CLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYS 1953
G + + PYK+ + G + GRKMSKSL N +P ++ GAD LRL++
Sbjct: 577 GTHLFGSVPYKKSVIVSGIVLAADGRKMSKSLKNYPDPSIVLNKYGADALRLYLI----- 631
Query: 1954 NEMSLSQEILKRTTDAYRRI--------RNTARFLLGNLHGFDPTLHL-VPLSDMIALD- 2103
N L E LK + + + N+ +FL G + ++ D + D
Sbjct: 632 NSPVLKAESLKFKEEGVKEVVSKVLLPWWNSFKFLDGQIALLKKMSNIDFQYDDSVKSDN 691
Query: 2104 ---RWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRL--YTMRE 2268
I+ L Q I +Y +V +LNF +L + Y+ + RL + E
Sbjct: 692 VMAEMILASMQSLVQVIHEEMGQYKLYTVVPKLLNFID-ELTNWYIRFNRRRLKGENVVE 750
Query: 2269 DAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELW----SYLP 2385
D A +++ FVR +AP F ++ ++ Y+P
Sbjct: 751 DC---LKALNSLFDALFTFVRAMAPFTPFLSESIYLRLKEYIP 790
>gi|3122909|sp|O28059|SYV_ARCFU VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|2648303 (AE000952) valyl-tRNA
synthetase (valS) [Archaeoglobus fulgidus]
Length = 863
Score = 256 bits (647), Expect = 7e-67
Identities = 199/773 (25%), Positives = 340/773 (43%), Gaps = 14/773 (1%)
Frame = +1
Query: 61 DLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
D + E L+ W+ + +Y + +P +++ PPY G H+GHA+N + D I
Sbjct: 8 DAHEVEEKWLKLWKDEMYYFDWNSE---KPHYIIDTPPPYPTGSFHIGHALNWCIIDFIA 64
Query: 241 KSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRR 420
+ K ++G++ + GWDCHGLP E+ +E+KYG + +FR+ C E+ E I R
Sbjct: 65 RYKRMNGYEVMFPQGWDCHGLPTEVKVEEKYGIKKGDIPRDEFRRLCVEFTEENIAKMRE 124
Query: 421 DFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAE 600
+R+G DW Y T+ + + + ++ +KG + R PV +C C + +A AE
Sbjct: 125 TARRMGYSIDWSKEYITMYPEYYSKTQLSFVRMYNKGLIYRDYHPVVFCPRCETTIALAE 184
Query: 601 IEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPT 780
IEY + + Y D + A TT P +PA +AI+V
Sbjct: 185 IEYRQGKTKL---NYIKFDDDVIIA-----------------TTRPELIPACVAIAV--- 221
Query: 781 LDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPD 960
H R +H++
Sbjct: 222 ----------HPDDER--------------------------------NKHLIGKKVRVP 239
Query: 961 RT---IPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVY 1131
T + ++ V E GTG V ++D + ++++ L EL + R
Sbjct: 240 TTPYEVEVIADEEVDPEFGTGVVMICTFGDRQDVKWWKKHKL-------ELRNIVGRDGR 292
Query: 1132 LPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATP 1311
L AG+ I +A I++ E+ H+ CWR KTP+
Sbjct: 293 LNEKAG----RYAGMTIPEAREAILEDLKKEGKLLKQVEIDHNVGTCWRCKTPVEIIPAE 348
Query: 1312 QWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRP-DWTISRQRTWGVPIPLFV 1488
QWF+ +E+ + L+A + W P+ +R+ S +++ DW ISRQR + PIP +
Sbjct: 349 QWFVKVEKEKI----LEAAKRIKWVPEHMYSRLESWVQSMEWDWVISRQRIFATPIPAWY 404
Query: 1489 HRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTE------ADQYEKITDILD 1650
++ G +V E+ W +D T E + ++ TD+LD
Sbjct: 405 CKNCG-----------EVVVAKEE-----WLPVDPTATQPPEPCPKCGSTEFRGETDVLD 448
Query: 1651 VWFDSGITHEAVLLERGLPK----PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCL 1818
W DS IT L+ G P P L +G D R W ++L +A++ P+ + +
Sbjct: 449 TWMDSSITP---LMICGWPSLKEYPTHLRPQGHDIIRTWAFYTILRSLALEGQIPWYEIV 505
Query: 1819 THGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTTD 1998
+G + GRKMSKSLGN I P+++++ G D LR W AS +++ + + + +
Sbjct: 506 INGMVFGEDGRKMSKSLGNVIVPEEVVEKYGVDALRQWAASGVIGDDIIFNWKDVIAASR 565
Query: 1999 AYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAE 2178
++ + RF L ++ + P+ L + DRWI+ + L ++ Y F E
Sbjct: 566 FQQKFWSITRFTLMHISDYTPSEEDKKL--LRDADRWILSKLNRLVGEVRKHMDEYRFDE 623
Query: 2179 IVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFT 2358
++ I F + YL++ K+RLY+ E+ +R+A+ + + R +API F
Sbjct: 624 AIKAIRTFTWYEYADNYLEIVKNRLYSGSEEE--KRAAKFVLSYALDVLTRLLAPITPFM 681
Query: 2359 ADELWSY 2379
A+E WS+
Sbjct: 682 AEECWSH 688
>gi|6686011|sp|Q9X7E5|SYI_MYCLE ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|4539131|emb|CAB39575.1| (AL049478) putative
isoleucyl-tRNA synthetase [Mycobacterium leprae]
Length = 1059
Score = 256 bits (646), Expect = 9e-67
Identities = 218/787 (27%), Positives = 353/787 (44%), Gaps = 59/787 (7%)
Frame = +1
Query: 61 DLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
+ P E +L+ W DD + A P ++ +DGPP+ANG H GH + +KDI+
Sbjct: 21 NFPALEAQVLDYWSNDDTFRASIARCDDAPEYVFYDGPPFANGLPHYGHLLTGYVKDIVP 80
Query: 241 KSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT-LDAV---QFRQKCREYAAEQIQ 408
+ + + G+ GWD HGLP E+ +E++ G + +DA+ F + CR+ +
Sbjct: 81 RYRTMCGYKVERRFGWDTHGLPAELEVERQLGITDKSQIDAMGIAAFNEACRKSVLRYTE 140
Query: 409 LQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSAL 588
+ R D+D YKTLD + I A ++ DKG + + +C+ + L
Sbjct: 141 EWQAYVTRQARWVDFDNDYKTLDLSYMESVIWAFKQLWDKGLAYESYRVLPYCWRDETPL 200
Query: 589 AEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLA---VPIWTTTPWTLPASL 759
+ E+ D DV DP A+ F D L + +WTTTPWTLP++L
Sbjct: 201 SNHELRMDD------DVYQSRQDP-AVTLGFKVLGGDDEDLVGAYLLVWTTTPWTLPSNL 253
Query: 760 AISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHIL 939
A++V P + YV V +G RR+ E+L + +GA +
Sbjct: 254 AVAVHPDVTYVDVR----AGDRRFVLAQARLTAYARELGDEPEVL--ATYRGADLLGRHY 307
Query: 940 AHPFY-----PDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAEL 1104
PF +L G+ V+ +DGTG VH AP +G++D + G++ +
Sbjct: 308 LPPFQYFYESARNAFQVLPGDFVTTDDGTGIVHIAPAYGEDDMATADKVGIV------PV 361
Query: 1105 NPVDARGVYLPTTPPFSELTLAGLHIWKANPLIV--------DXXXXXXXXXXXXEMHHS 1260
PVD+ G + T P + G H+++AN I+ H
Sbjct: 362 TPVDSNGCFDATVPDYQ-----GQHVFEANAQIIRDLKNQSGSAAVNGAVLLRHETYEHP 416
Query: 1261 YPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQ-ARILSMIENRPD 1437
YPHCWR + P+++RA WF+++ + R ++ +TWYP+ + + ++ D
Sbjct: 417 YPHCWRCRNPLIYRAVSSWFVAVTE--FRDRMVELNQQITWYPEHVKDGQFGKWLQGARD 474
Query: 1438 WTISRQRTWGVPIPLFVHRHSGAPH---------------PRSAALMRQVADRVEQQGVD 1572
W+ISR R WG PIP++ P R L R D + + D
Sbjct: 475 WSISRNRYWGTPIPVWKSDDPDYPRIDVYGSLDELERDFGVRPTNLHRPYIDELTRPNPD 534
Query: 1573 IWYSLDQTELLGTEADQYEKITDILDVWFDSGITHEAVL-------------------LE 1695
D T L +I D+ DVWFDSG A + +
Sbjct: 535 -----DPTGL-----STMRRIPDVFDVWFDSGSMPYAQVHYPFENDDWFDGFDSADSDKQ 584
Query: 1696 RGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGN 1875
P D +E Q RGWF + + A+ + +K C+ HG + +G+KMSKSL N
Sbjct: 585 VDAHYPGDFIVEYIGQARGWFYTLHVLATALFDRPAFKTCIAHGVVLGSNGQKMSKSLRN 644
Query: 1876 GIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGF 2055
+ +I G+D +R ++ ++ L L T R L N + F
Sbjct: 645 YPDVTEIFDRDGSDAMRWFLMASPI-----LRGGNLIITEPGIREGMRQVLLPLWNAYSF 699
Query: 2056 ----DPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGS 2223
P + LDR+I+ + L+ + A D + + + F + L +
Sbjct: 700 LALYAPKIGTWHTDVSHVLDRYILAKLAVLRDDLSQAMEVCDISGACEQLRQF-TEPLTN 758
Query: 2224 LYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHADN 2403
YL ++ R + ED + T + +TA R AP+L + +W + G +
Sbjct: 759 WYLRRSRARFWD--EDVDAIDTLHTVL-EVTA---RLAAPLLPLITEIIWRSVTGGR--S 810
Query: 2404 VLFTTW 2421
V T W
Sbjct: 811 VHLTDW 816
>gi|3256704|dbj|BAA29387.1| (AP000001) 896aa long hypothetical
valyl-tRNA synthetase [Pyrococcus horikoshii]
Length = 896
Score = 251 bits (634), Expect = 2e-65
Identities = 211/775 (27%), Positives = 338/775 (43%), Gaps = 18/775 (2%)
Frame = +1
Query: 49 PMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
P D + EP + W + Y K P + + PP+ +G +HLGH ++
Sbjct: 8 PKNYDPNEIEPKWQKYWLEEKIYKYRLDENK--PSYAIDTPPPFTSGTLHLGHVLSHTWI 65
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQ-FRQKCREYAAEQI 405
DII + K + G++ + G+D HGLP E+ +EK++G +T D + F +KC E+ + I
Sbjct: 66 DIIARYKRMRGYNVLFPQGFDNHGLPTELKVEKEFG---ITKDQPEEFLKKCVEWTWQAI 122
Query: 406 QLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSA 585
+ R+ F R+G DWD Y T+D ++A R+L + KG + R PV+WC C ++
Sbjct: 123 EAMRKQFIRIGYSADWDLEYHTMDDWYKAAVQRSLLEFYKKGLIYREEHPVYWCPKCRTS 182
Query: 586 LAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAI 765
LA+AE+ Y ++ + + P D S +PI TT P +PA +A+
Sbjct: 183 LAKAEVGYVEEEGYLYYIKLPLADGSGY---------------IPIATTRPELMPACVAV 227
Query: 766 SVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAH 945
V P + RY H K +
Sbjct: 228 FVHPDDE----------------------------RYK------HLVGKKVKL------- 246
Query: 946 PFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARG 1125
P + +R +P+L V GTGAV+ +G E V+Q+ Y+ + ++ G
Sbjct: 247 PIF-EREVPILADEDVDPNFGTGAVYNCT-YGDEQDIVWQK-----RYNLPVIIVINEDG 299
Query: 1126 VYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSY-PHCWRHK--TPIV 1296
P+ AGL I +A I + ++ H H R PI
Sbjct: 300 TMNENAGPY-----AGLKIEEARKKIAEDLEKMGLLYKKEKIKHRVLRHTERSSCMAPIE 354
Query: 1297 FRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRP-DWTISRQRTWGVP 1473
QWFI ++ L +K + WYP+ R+ E+ DW ISRQR +G P
Sbjct: 355 LLPKKQWFIKVKD--LIDEIIKVAKEINWYPEDMFLRLKDWAESMDWDWVISRQRVFGTP 412
Query: 1474 IPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDV 1653
P +V ++ R L V R ++ VD + + G E E +TD+LD
Sbjct: 413 FPFWVCKNGHIIPAREEDL--PVDPRFDKPPVD------KCPVCGAEI---EPVTDVLDC 461
Query: 1654 WFDSGIT-------HEAVLLERGLPK------PADLYLEGADQHRGWFQSSLLTGVAMDN 1794
W DS IT HEA+ + K P L +G D R W ++L +
Sbjct: 462 WVDSSITPLIITKWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTILRTYVLTG 521
Query: 1795 AAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQ 1974
P+K + +G GRKMSKS GN + P+++I GAD LRLW A +
Sbjct: 522 KKPWKDIVINGMVAGPDGRKMSKSYGNVVSPEEVIPKYGADALRLWTALAPPGEDHPFKW 581
Query: 1975 EILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAA 2154
E + +++ N RF ++ FD + ++ LD+WI+ R + +
Sbjct: 582 ETVDYNYRFLQKVWNIYRFAERHIKDFDYEKYRD--VELEPLDKWILSRLHRIIKFATEE 639
Query: 2155 YTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRW 2334
RY F I + ++ F ++ Y+++ K RLY ED + A+ A+Y L +
Sbjct: 640 LERYRFNLITRELITFIWHEVADDYIEMIKYRLY--GEDEESKLKAKVALYELLYNVMLL 697
Query: 2335 IAPILSFTADELW 2373
+AP + +E++
Sbjct: 698 LAPFVPHITEEIY 710
>gi|5459071|emb|CAB50557.1| (AJ248288) valyl-tRNA synthetase (valS)
[Pyrococcus abyssi]
Length = 891
Score = 249 bits (628), Expect = 1e-64
Identities = 207/775 (26%), Positives = 332/775 (42%), Gaps = 22/775 (2%)
Frame = +1
Query: 49 PMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
P + D + EP + W + Y K P + + PP+ +G +HLGH ++
Sbjct: 3 PKKYDPNEIEPKWQKYWLEEKIYKYRLDENK--PSYAIDTPPPFTSGTLHLGHVLSHTWI 60
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQ-FRQKCREYAAEQI 405
DII + K + G++ + G+D HGLP E+ +EK++G +T D + F +KC E+ + I
Sbjct: 61 DIIARYKRMRGYNVLFPQGFDNHGLPTELKVEKEFG---ITKDQPEEFLKKCVEWTWQAI 117
Query: 406 QLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSA 585
+ R+ F R+G DWD Y T+D ++A ++L + KG + R PV+WC C ++
Sbjct: 118 EAMRKQFIRIGYSADWDLEYHTMDDWYKAAVQKSLLEFYKKGLIYREEHPVYWCPKCRTS 177
Query: 586 LAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAI 765
LA+AE+ Y ++ + + P D S +PI TT P +PA +A+
Sbjct: 178 LAKAEVGYVEEEGYLYYIKLPLADGSGY---------------IPIATTRPELMPACVAV 222
Query: 766 SVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAH 945
V P + RY H K +
Sbjct: 223 FVHPDDE----------------------------RYK------HLVGKKVKL------- 241
Query: 946 PFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARG 1125
P Y +R +P+L V GTGAV+ +G E V+Q+ Y+ + ++ G
Sbjct: 242 PIY-EREVPILADEDVDPNFGTGAVYNCT-YGDEQDIVWQK-----RYNLPVIIAINEDG 294
Query: 1126 VYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSY-PHCWRHK--TPIV 1296
P+ AGL + +A I + ++ H H R PI
Sbjct: 295 TMNENAGPY-----AGLKVEEARKKIAEDLEKMGLLYKKEKIKHRVLRHTERSSCMAPIE 349
Query: 1297 FRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRP-DWTISRQRTWGVP 1473
QWFI ++ +K + WYP+ R+ E+ DW ISRQR +G P
Sbjct: 350 LLPKKQWFIRVKD--FTDEIVKVAKEINWYPEDMFLRLKDWAESMDWDWVISRQRVFGTP 407
Query: 1474 IPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDV 1653
P +V ++ + R E VD + E + E +TD+LD
Sbjct: 408 FPFWVCKNGHI-----------IPAREEDLPVDPRFDKPPVEKCPVCGAEIEPVTDVLDC 456
Query: 1654 WFDSGIT-------HEAVLLERGLPK------PADLYLEGADQHRGWFQSSLLTGVAMDN 1794
W DS IT HEA+ + K P L +G D R W ++ +
Sbjct: 457 WVDSSITPLIITRWHEAIKGDEEAKKWFEHNFPTALRPQGTDIIRTWAFYTIFRTFKLTG 516
Query: 1795 AAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQ 1974
P+K + +G GRKMSKS GN + P ++I GAD LRLW A +
Sbjct: 517 KKPWKDIVINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTALAPPGEDHPFKW 576
Query: 1975 EILKRTTDAYRRIRNTARFLLGNLHGFD----PTLHLVPLSDMIALDRWIVHRAFELQQT 2142
E + +++ N RF ++ FD + L P LDRWI+ R + +
Sbjct: 577 ETVDYNFRFLQKVWNIYRFAERHIKDFDYEKYKDIELEP------LDRWILSRLHRIIKF 630
Query: 2143 IKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAA 2322
RY F I + ++ F ++ Y+++ K RLY +D + A+ A+Y L
Sbjct: 631 ATEELERYRFNLITRELMTFIWHEVADDYIEMVKYRLY--GDDEESKLKAKVALYELLYN 688
Query: 2323 FVRWIAPILSFTADELW 2373
+ +AP + +E++
Sbjct: 689 VMLLLAPFVPHITEEIY 705
>gi|2501068|sp|Q58413|SYV_METJA VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|2129352|pir||F64425 valine--tRNA
ligase (EC 6.1.1.9) - Methanococcus jannaschii
>gi|1591666 (U67543) valyl-tRNA synthetase (valS)
[Methanococcus jannaschii]
Length = 878
Score = 248 bits (626), Expect = 2e-64
Identities = 206/763 (26%), Positives = 323/763 (41%), Gaps = 15/763 (1%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E I ++WE Y +P +++ PPY G++HLGHA+N DII + K +
Sbjct: 12 EKQIQKKWEESKIYKF--DEESNKPPYIIDTPPPYPTGRLHLGHALNWTYMDIIARYKRM 69
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRL 435
GF+ + GWDCHGLP E+ +E+ +G +D +FR+ C E E I+ RR K L
Sbjct: 70 KGFNVLFPQGWDCHGLPTEVKVEEIHGITKSDVDRHKFRELCIELTKENIEKMRRQIKSL 129
Query: 436 GIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTD 615
GI DWD Y T+ + A ++ G + RG PV+WC C +A+A AE+EY +
Sbjct: 130 GISIDWDKEYITMTPEYIKKSQTAFVRMYKDGLIYRGKFPVNWCPRCQTAIAFAEVEYKE 189
Query: 616 KTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVL 795
+ S + + +PA D + I TT P + A +AI V P
Sbjct: 190 RESKLNYIKFPAADGEG---------------HLLIATTRPELMAACVAILVHP------ 228
Query: 796 VEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYP---DRT 966
RY +H++ F
Sbjct: 229 ----------------------EDERY-----------------KHLIGKEFIVPLFGHK 249
Query: 967 IPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTP 1146
+ LL V E GTGAV + D +N + +D +G
Sbjct: 250 VKLLADEDVEKEFGTGAVMVCTFGDKTD------VLWVNRHKLEIKKAIDEKGELTEIAG 303
Query: 1147 PFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFIS 1326
+ GL +A I++ + + CWR KTPI T QWF++
Sbjct: 304 KYK-----GLKTEEAREKIIEDLKKEGYLVKQEPIKQNVGVCWRCKTPIEIIVTEQWFVN 358
Query: 1327 MEQAALRSAALKAITHVTWYPQWGQARILSMIENRP-DWTISRQRTWGVPIPLFVHRHSG 1503
+ + L + + W P+ + R+L+ IE+ DW ISRQR + PIP++ G
Sbjct: 359 VRK--LIPKVREVADEIKWIPEHMKIRLLNWIEDMDWDWVISRQRIFATPIPVWYCPKCG 416
Query: 1504 APHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSGITHEA 1683
V + E +D + + G + E TD+LD W DS IT
Sbjct: 417 ----------NVVVAKEEDLPIDPTKTGYVCDKCGNKDLIPE--TDVLDTWMDSSITPMV 464
Query: 1684 VLLERGLPK------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQH 1845
+ K P L +G D R W +++ VA+ P+ + + +G +
Sbjct: 465 ITKWLDDDKFFEKHYPVQLRPQGHDIIRTWAFYTIVKSVALTGKKPWDEIVINGMVFGED 524
Query: 1846 GRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIR--- 2016
G KMSKS GN +EP +II GAD LRLW +++ +++ Q + K YR +R
Sbjct: 525 GHKMSKSRGNVVEPDEIIAKYGADALRLWASNSVVGDDV---QFLWKEVDYGYRFLRKSW 581
Query: 2017 NTARFLLGNLHGFDPTLHLV--PLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQT 2190
N RF +H D + + P+ +D WI+ + L + + Y F IV+
Sbjct: 582 NACRF--AKMHISDDIIDELKKPMEISNPIDLWILSKLQRLIERVDKDLENYRFNTIVE- 638
Query: 2191 ILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTAD 2364
I F + Y+++ K RLY +D ++ A+ +Y++ VR + P +D
Sbjct: 639 IYKFVWHEFCDNYIEMVKYRLY--GDDEEAKKEARWTLYYVIDKVVRLLCPFAPHFSD 694
>gi|6459088|gb|AAF10907.1|AE001980_2 (AE001980) isoleucyl-tRNA
synthetase [Deinococcus radiodurans]
Length = 1078
Score = 247 bits (623), Expect = 5e-64
Identities = 216/791 (27%), Positives = 351/791 (44%), Gaps = 55/791 (6%)
Frame = +1
Query: 49 PMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
P + + + E IL++W+ + + Q + F+ ++GPP ANG+ L H + + K
Sbjct: 10 PTQPNFRQLEADILQKWKDEQVFEQTQTRPAPAGEFVFYEGPPTANGKPALHHVLARSFK 69
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAV-----QFRQKCREYA 393
D+ + K + G GWD HGLP+EI++EKK G +G A +F + CR
Sbjct: 70 DLFPRFKVMQGHHVTRKGGWDTHGLPVEISVEKKLGWLGRNHGASREELEEFNRLCRTSV 129
Query: 394 AEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFD 573
E IQ +R+G D PY T + L ++ +KG + + K V
Sbjct: 130 WETIQDWNELTERMGYWLDLGDPYITYQNSYVESVWNLLRRLHEKGLVAQDYKVVPLSPR 189
Query: 574 CGSALAEAEIEYTDK----TSPMVDVAYP----ALDPSALAAVFNATLPPDVQLAVPIWT 729
S L+ AE+ D P V V P L A AA+ + + L++ +WT
Sbjct: 190 ISSTLSRAELGEVDSYRMVDDPSVYVRLPIVWDTLPERAHAALSSLSGEQRQGLSLLVWT 249
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWTLP++ +V P LDYV+ + P+ R A L +
Sbjct: 250 TTPWTLPSNTLAAVNPDLDYVVADSPSG----RVIVAEGAVERLSALHKDAAPLEVLARF 305
Query: 910 KGAAMEQHILAHPFYPDRTIPL-------------------LLGNHVSAEDGTGAVHTAP 1032
KG +E + P +P+ L ++ + VS DG+G H AP
Sbjct: 306 KGRDLEW-VEYEPPFPEVASQLGVVSELHERRDGKPVLHFVVMADFVSDVDGSGVAHEAP 364
Query: 1033 GHGQEDHQVFQQYGLLNHYSAAE---LNPVDARGVYLPTTPP--FSELTLAGLHIWKANP 1197
+G ED +V + YG+ + + L +G + +++ GL W
Sbjct: 365 AYGAEDLEVARAYGVPLMFGVDDHGILQVTHEQGKFFKDADKGLIADMKARGLMFWAGT- 423
Query: 1198 LIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHV 1377
+ H YP R PI++ A W+I Q A L +
Sbjct: 424 -----------------LKHRYPFHDRTGDPILYFAKKGWYIRTSQVA--GEMLAQNEKI 464
Query: 1378 TWYP-QWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRV 1554
W P R + +E DW ISR+R WG P+P + S A + ++A R
Sbjct: 465 NWVPGNIKHGRFGNWLEGNVDWAISRERYWGTPLPFWQSESGQLRVIGSVAELSELAGR- 523
Query: 1555 EQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSG---------ITHEAVLLERGLP 1707
+ +D+ + ++Y ++ ++LDVWFDSG + +E RG
Sbjct: 524 DLSDLDLHRPYIDDITFTLDGEEYRRVPEVLDVWFDSGSMPYAQWGLLLNEQGEAVRGAE 583
Query: 1708 K-----PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLG 1872
+ PAD E DQ RGWF S + + YK + G VD+ G KMSKS G
Sbjct: 584 QFAKHYPADYICEAIDQTRGWFYSLHAISTMLYDQPAYKNVICLGHIVDEKGLKMSKSKG 643
Query: 1873 NGIEPQDIIKTLGADILRLWI-ASTDYSNEMSLSQEILKRTTDAY-RRIRNTARFLLGNL 2046
N + P + GAD +R ++ ++D ++ S+ ++ +Y + N F +
Sbjct: 644 NVVAPLPLFDQYGADSVRWYMFMASDPGDQKRFSERLVAEAQRSYVNTLWNVYSFFVLYA 703
Query: 2047 HGFDPTLHLVP-LSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGS 2223
+ P L P +++ +DRW++ R E + + AA YD + + F DL +
Sbjct: 704 NLDQPDLAAAPAVAERPEMDRWLLARLEETVRDVTAALESYDARSGGRALEGFVD-DLSN 762
Query: 2224 LYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHADN 2403
Y+ ++ R + E +A ++ + AP F AD L+ L G+ + +
Sbjct: 763 WYVRRSRSRFW--GEGGTVDTAAYATLHEALLVVSQLTAPFTPFLADALYRNLSGEES-S 819
Query: 2404 VLFTTW 2421
V T W
Sbjct: 820 VHLTPW 825
>gi|6226182|sp|Q9ZCU4|SYI_RICPR ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS)
>gi|3861160|emb|CAA15060| (AJ235272) PROBABLE
ISOLEUCYL-TRNA SYNTHETASE (ileS) [Rickettsia prowazekii]
Length = 1086
Score = 244 bits (617), Expect = 2e-63
Identities = 199/749 (26%), Positives = 343/749 (45%), Gaps = 56/749 (7%)
Frame = +1
Query: 61 DLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
D E IL+ W+ ++ + + + G F+ +DGPP+ANG H GH + +KD+
Sbjct: 15 DFAAIEQEILKFWQNNNIFQKSIDYRNGESEFIFYDGPPFANGLPHYGHLLTGFIKDVYA 74
Query: 241 KSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG---KVGVTLDAVQ-FRQKCR----EYAA 396
+ K + G GWDCHGLP E+ EK+ G ++ +T ++ F CR +YA+
Sbjct: 75 RYKTIKGKKVERRFGWDCHGLPAEMQSEKELGISGRIAITNFGIEKFNNHCRASVMQYAS 134
Query: 397 EQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDC 576
E Q R + + + YKT+D F + A ++ +K L + + + + C
Sbjct: 135 EWEQYVTRQARWVA----FKNAYKTMDKNFMESVLWAFKELYNKDLLYESMRVMPYSWAC 190
Query: 577 GSALAEAEIE----YTDKTSPMVDVAYPALDPSALAAVFNATLPPDV-----QLAVPIWT 729
+ L+ E Y ++T + V++ + + + + + + + WT
Sbjct: 191 ETPLSNFETRLDNAYRERTDKAITVSFVLNEVTLINGIISQKSDMKEGDNFKEYRILAWT 250
Query: 730 TTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSA 909
TTPWTLPA+LA++VG +DY V+ G++
Sbjct: 251 TTPWTLPANLALAVGSDIDYAFVDK-----NEVCYIIAASSVAKYAKELGLSGKENFEII 305
Query: 910 KGAAME--------QHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQ 1065
KG ++ + HP + + + V DGTG VH APG G++D + +
Sbjct: 306 KGLKLQGLSYKPLFNYFENHP----NSFKIFASDFVVEGDGTGIVHMAPGFGEDDQILCE 361
Query: 1066 QYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXX 1245
G+ + PVD G + P L G+ ++ AN I+
Sbjct: 362 SKGI------ELVCPVDNSGKFTKEIPD-----LEGVQVFDANDKIIIKLKEQGNWIKTE 410
Query: 1246 EMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSM-I 1422
+ H+YPHCWR TP++++A P W++ + + R L + W P + + +
Sbjct: 411 QYIHNYPHCWRTDTPLIYKAVPSWYVRVTKFKDRMVELNQ--QINWIPHNVKDNLFGKWL 468
Query: 1423 ENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQT-- 1596
EN DW+ISR R WG P+P++ + +PR V +E+ D ++
Sbjct: 469 ENARDWSISRNRFWGTPLPVW--KSDDPKYPRI-----DVYGSIEEIEKDFGVKINDLHR 521
Query: 1597 ----ELLGTEADQ------YEKITDILDVWFDSGI-----THEAVLLERGLPK--PADLY 1725
EL T D +I D+ D WF+SG H ++ + PAD
Sbjct: 522 PFIDELTRTNPDDPTGKSTMRRIDDVFDCWFESGSMPYGQVHYPFENKKWFVEHFPADFI 581
Query: 1726 LEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKT 1905
+E + Q RGWF + ++ A+ + P+ C+ HG +D G+K+SK L N +P ++
Sbjct: 582 VEYSSQTRGWFYTLMVLSTALFDRPPFLNCICHGVILDATGQKLSKRLNNYADPLELFDK 641
Query: 1906 LGADILRLWIASTDYSNEMSLSQEIL-----KRTTDAYR----RIRNTARF--LLGNLHG 2052
G+D LR+ T S+ + QE+L K D R I N F + N
Sbjct: 642 YGSDALRV----TMLSSNVVKGQELLIDKDGKMVFDTLRLFIKPIWNAYHFFTIYANADS 697
Query: 2053 FDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYL 2232
TL+ + LD +I+ + I+ + +D + F V L + Y+
Sbjct: 698 LKGTLN---FASQNVLDVYILSKLKIAVNKIEESLDNFDTQTAYHAVSEFFEV-LNNWYI 753
Query: 2233 DVTKDRLYTMREDAPGRRSAQTAMY 2307
++ R + +D +++A +Y
Sbjct: 754 RRSRARFWKNEKDT-DKQNAYNTLY 777
>gi|4982399|gb|AAD36880.1|AE001819_3 (AE001819) valyl-tRNA synthetase
[Thermotoga maritima]
Length = 865
Score = 231 bits (584), Expect = 2e-59
Identities = 204/738 (27%), Positives = 313/738 (41%), Gaps = 23/738 (3%)
Frame = +1
Query: 172 PPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK----KYGK 339
PP G+IH+GHA+N L+DI+++ K + G+D ++PG D G+ + A+EK GK
Sbjct: 42 PPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEKFLLQTQGK 101
Query: 340 VGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKI 519
+ +F + E+A + + R K LG DW TLD + ++
Sbjct: 102 TREEIGREKFLEITWEWANKYRREIREQIKALGASVDWTRERFTLDEGLSRAVRKVFVEL 161
Query: 520 VDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPP 699
KG + RG V+WC C + L++ E+E+ + S + V YP D V
Sbjct: 162 YRKGLIYRGKYIVNWCPRCKTVLSDEEVEHKEHKSKLYYVKYPVKDSDEYIVVA------ 215
Query: 700 DVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYG 879
TT P T+ A++V H R+
Sbjct: 216 ---------TTRPETMLGDTAVAV-------------HPEDERYKNF------------- 240
Query: 880 IAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQV 1059
+ + LI R IP++ +V + GTGAV P H D+ +
Sbjct: 241 VGKTLILPLV----------------GREIPVVADKYVDPKFGTGAVKVTPAHDPNDYLI 284
Query: 1060 FQQYGLLNHYSAAELNPVDAR-----GVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXX 1224
Q++ L E+ +AR G Y GL ++A IV
Sbjct: 285 AQRHNL----PMIEIFDDNARINENGGKY------------KGLDRYEAREKIVKDLEEQ 328
Query: 1225 XXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQ-WGQ 1401
+ HS HC+R T I + + QWF+S + A R+ + ++P+ W +
Sbjct: 329 GFLVKIEDYTHSVGHCYRCDTVIEPKLSDQWFVSTKPLAKRAIEAVENGEIRFFPERWTK 388
Query: 1402 ARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWY 1581
+ M E R DW ISRQ WG IP++ + G + V ++ V+
Sbjct: 389 VYLNWMYEIR-DWCISRQLWWGHRIPVWYCQDCGHLN-------------VSEEDVEKCE 434
Query: 1582 SLDQTELLGTEADQYEKITDILDVWFDSGITHEAVLLERGLPK---------PADLYLEG 1734
T L E D+LD WF S + + L G P+ P DL + G
Sbjct: 435 KCGSTNLKQDE--------DVLDTWFSSALWPFSTL---GWPEETEDLKRYYPTDLLVTG 483
Query: 1735 ADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGA 1914
D W ++ G N P+ H D++GRKMSKSLGNGI+P ++I GA
Sbjct: 484 FDIIFFWVARMIMMGYEFMNDKPFSHVYIHQLVRDKYGRKMSKSLGNGIDPLEVIDEYGA 543
Query: 1915 DILRLWIASTDYSNEMSLSQEILKRTTDAYR----RIRNTARFLLGNLHGFDPTLHLVPL 2082
D +R +A ++ R DAY+ +I N RF+L NL + VPL
Sbjct: 544 DPMRFTLAILAAQGR---DIKLDPRYFDAYKKFANKIWNATRFVLMNLEDYKE----VPL 596
Query: 2083 SDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTM 2262
++ +D+WI+ R + + + A YDF +TI NF D Y++ +K RL T
Sbjct: 597 ENLKTVDKWILTRLNKTVEEVTNALENYDFNIAARTIYNFFWDDFCDWYIEASKPRLKTE 656
Query: 2263 REDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
R QT + + A +R + P + F +ELW LP
Sbjct: 657 E-----RNLVQTVLVKVLDASLRLLHPFMPFLTEELWQKLP 692
>gi|586069|sp|Q05873|SYV_BACSU VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|541424|pir||S41420 valine--tRNA
ligase (EC 6.1.1.9) - Bacillus subtilis
>gi|452309|emb|CAA54458| (X77239) valyl-tRNA synthetase
[Bacillus subtilis] >gi|2635274|emb|CAB14769| (Z99118)
valyl-tRNA synthetase [Bacillus subtilis]
Length = 880
Score = 229 bits (579), Expect = 7e-59
Identities = 196/784 (25%), Positives = 343/784 (43%), Gaps = 20/784 (2%)
Frame = +1
Query: 70 KREPAILERWERDDFYAQLRAHAKG----RPLFLLHDGPPYANGQIHLGHAVNKILKDII 237
K +PA +E+ +R DF+ + + G + + + PP G++HLGHA + L+DI+
Sbjct: 11 KYDPAAVEK-DRYDFWLKGKFFEAGSDQTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIV 69
Query: 238 IKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKY---GKVGVTLDAVQFRQKCREYAAEQIQ 408
+ K + G+D ++PG D G+ + +E K GK L +F ++ ++ E
Sbjct: 70 TRMKRMQGYDVLWLPGMDHAGIATQAKVEAKLREEGKSRYDLGREKFLEETWKWKEEYAD 129
Query: 409 LQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSAL 588
R + +LG+ D+ TLD K+ +KG + RG ++W +AL
Sbjct: 130 FIRSQWAKLGLGLDYSRERFTLDEGLSKAVREVFVKLYEKGLIYRGEYIINWDPATKTAL 189
Query: 589 AEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAIS 768
++ E+ Y D ++YP D S ++ I TT P T+ A++
Sbjct: 190 SDIEVIYKDVQGAFYHMSYPLADGSG---------------SIEIATTRPETMLGDTAVA 234
Query: 769 VGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHP 948
V H R+ ++ I + +I
Sbjct: 235 V-------------HPEDERY-------------KHLIGKTVILPIV------------- 255
Query: 949 FYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGV 1128
+R IP++ ++V E G+GAV P H D + L N ++ + ++ G
Sbjct: 256 ---NREIPIVGDDYVDMEFGSGAVKITPAHDPNDFE------LGNRHNLERILVMNEDG- 305
Query: 1129 YLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRAT 1308
T + L G+ ++ +V + HS H R + +
Sbjct: 306 ----TMNENALQYQGMDRFECRKKLVKDLQEAGVLFKIEDHMHSVGHSERSGAVVEPYLS 361
Query: 1309 PQWFISMEQAALRSAAL-KAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLF 1485
QWF+ M+ A + L K V + P + L +EN DW ISRQ WG IP +
Sbjct: 362 TQWFVRMQPLADAAIELEKKEEKVNFVPDRFEKTYLHWMENIRDWCISRQLWWGHRIPAW 421
Query: 1486 VHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDS 1665
H+ +G +++ L+ E +++ +E+ TD+LD WF S
Sbjct: 422 YHKETG----------------------ELYVGLEAPE----DSENWEQDTDVLDTWFSS 455
Query: 1666 GITHEAVLLERGLPK----------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQC 1815
+ + + G P P D+ + G D W + G+ P+K
Sbjct: 456 ALWPFSTM---GWPDVTAEDFKRYYPTDVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDV 512
Query: 1816 LTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIAS-TDYSNEMSLSQEILKRT 1992
L HG D+ GRKMSKSLGNG++P D+I GAD LR ++A+ + ++ S E ++ T
Sbjct: 513 LIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRYFLATGSSPGQDLRFSYEKVEST 572
Query: 1993 TDAYRRIRNTARFLLGNLHGFDPTLHLVPLS-DMIALDRWIVHRAFELQQTIKAAYTRYD 2169
+ +I N +RF L N+ G T + LS + D+WI+ R E + + RY+
Sbjct: 573 WNFANKIWNASRFALMNMDGM--TYDELDLSGEKSVADKWILTRLNETIEHVTQLADRYE 630
Query: 2170 FAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPIL 2349
F E+ + + NF D Y+++ K LY ED +++ ++ + ++ +R + P +
Sbjct: 631 FGEVGRHLYNFIWDDFCDWYIEMAKLPLY--GEDEAAKKTTRSILAYVLDQTMRLLHPFM 688
Query: 2350 SFTADELWSYLPGDHADNVLFTTW 2421
F +E+W +LP +++ + W
Sbjct: 689 PFLTEEIWQHLP-HQGESITVSQW 711
>gi|549036|sp|P36420|SYV_LACCA VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|541449|pir||A49856 valine--tRNA
ligase (EC 6.1.1.9) - Lactobacillus casei >gi|409360
(L08854) valyl-tRNA synthetase [Lactobacillus casei]
Length = 901
Score = 220 bits (556), Expect = 3e-56
Identities = 189/751 (25%), Positives = 314/751 (41%), Gaps = 18/751 (2%)
Frame = +1
Query: 172 PPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT 351
PP G++H+GHA + L+DI+I+ K ++GFD ++PG D G+ + +E K K G++
Sbjct: 67 PPNVTGKLHMGHAWDTTLQDIVIRQKRIEGFDTLWLPGMDHAGIATQAKVEAKLRKEGIS 126
Query: 352 ---LDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIV 522
L +F QK E+ E + + ++G+ D+ TLD R +
Sbjct: 127 RYDLGREKFVQKVWEWKDEFAKTIHGQWAKMGLSLDYSRERFTLDKGLNQAVRRVFVDLY 186
Query: 523 DKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPD 702
++G + RG V+W +AL++ E+ + D V YP D S
Sbjct: 187 NQGLIYRGEYIVNWDPQARTALSDIEVIHKDDKGAFYHVKYPFADGSGY----------- 235
Query: 703 VQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGI 882
+ I TT P T+ A++V H G R+
Sbjct: 236 ----IEIATTRPETMMGDTAVAV-------------HPGDERYKDMVGT----------- 267
Query: 883 AELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVF 1062
EL++ +R IP++ +V E GTGAV P H D QV
Sbjct: 268 -ELILP-----------------LANRKIPIIEDAYVDPEFGTGAVKITPAHDPNDFQVG 309
Query: 1063 QQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXX 1242
N + +N ++ G + G+ ++A +V
Sbjct: 310 ------NRHDLKRINTMNDDGTMNENAGKYQ-----GMDRFEARKAMVADLDKAGLLLKV 358
Query: 1243 XEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITH----VTWYPQWGQARI 1410
+ HS H R + R + QWF+ M+ A AA+KA VT+ P+ +
Sbjct: 359 EPIVHSVGHSERTGVQVEARLSTQWFVKMKPLA--EAAIKAQQEPDKKVTFVPERFEHTY 416
Query: 1411 LSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLD 1590
L +EN DW ISRQ WG IP + ++ +G + A
Sbjct: 417 LQWMENIHDWVISRQLWWGHQIPAWYNKQTGETYVGMEA--------------------- 455
Query: 1591 QTELLGTEADQYEKITDILDVWFDSGITHEAVLLERGLPK----------PADLYLEGAD 1740
+ + +++ D+LD WF S + + + G P P D + G D
Sbjct: 456 -----PKDIENWKQDPDVLDTWFSSALWPFSTM---GWPNTDAPDYKRYYPTDTLVTGYD 507
Query: 1741 QHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADI 1920
W + G+ + P++ L HG D+ GRKMSKSLGNGI+P D+I+ GAD
Sbjct: 508 IIPFWVARMIFQGLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIEKYGADA 567
Query: 1921 LRLW-IASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIA 2097
LR + I + S + ++ + +I N +RF++ NL D P S
Sbjct: 568 LRWFLITGNKPGQDTRFSYKQVEAAWNFINKIWNISRFVMMNLGDLDTPQQPDP-STFDL 626
Query: 2098 LDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAP 2277
D+W+ + E + + R++F E+ +T+ NF L Y++++K+ LY +D
Sbjct: 627 SDKWLFAQLNETIKQVMDLSARFEFGEMGRTLYNFTWNVLADWYVEMSKEVLY--GDDEQ 684
Query: 2278 GRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHADNVLFTTWY 2424
+ + + + + +R + P++ F +LW LP H + T Y
Sbjct: 685 AKAAKRVNLAYALDQILRLLHPVMPFVHGKLWLALP--HTGKSIVTASY 731
>gi|68538|pir||SYBSVS valine--tRNA ligase (EC 6.1.1.9) - Bacillus
stearothermophilus
Length = 880
Score = 219 bits (552), Expect = 1e-55
Identities = 195/791 (24%), Positives = 328/791 (40%), Gaps = 16/791 (2%)
Frame = +1
Query: 49 PMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
P + D E E W + F+ + RP F + PP G++HLGHA + L+
Sbjct: 9 PPKYDHRAVEAGRYEWWLKGKFF-EATGDPNKRP-FTIVIPPPNVTGKLHLGHAWDTTLQ 66
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT---LDAVQFRQKCREYAAE 399
DII + K + G+D ++PG D G+ + +E+K + G++ L +F ++ ++ E
Sbjct: 67 DIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLRQQGLSRYDLGREKFLEETWKWKEE 126
Query: 400 QIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCG 579
R + +LG+ D+ TLD + KG + RG ++W
Sbjct: 127 YAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAVREVFVSLYRKGLIYRGEYIINWDPVTK 186
Query: 580 SALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASL 759
+AL++ E+ Y + + + YP D S + + TT P T+
Sbjct: 187 TALSDIEVVYKEVKGALYHMRYPLADGSGF---------------IEVATTRPETMLGDT 231
Query: 760 AISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHIL 939
A++V H R+ + +L I G
Sbjct: 232 AVAV-------------HPDDERYKHLIGK----------MVKLPIVG------------ 256
Query: 940 AHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDA 1119
R IP++ +V E G+GAV P H D ++ ++ L E ++
Sbjct: 257 -------REIPIIADEYVDMEFGSGAVKITPAHDPNDFEIGNRHNLPRILVMNEDGTMNE 309
Query: 1120 RGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVF 1299
+ GL ++ IV E HS H R I
Sbjct: 310 NA-----------MQYQGLDRFECRKQIVRDLQEQGVLFKIEEHVHSVGHSERSGAVIEP 358
Query: 1300 RATPQWFISMEQAALRSAALKAIT-HVTWYPQWGQARILSMIENRPDWTISRQRTWGVPI 1476
+ QWF+ M+ A + L+ V + P+ + L +EN DW ISRQ WG I
Sbjct: 359 YLSTQWFVKMKPLAEAAIKLQQTDGKVQFVPERFEKTYLHWLENIRDWCISRQLWWGHRI 418
Query: 1477 PLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVW 1656
P + H+ +G + D + ++ W E+ D+LD W
Sbjct: 419 PAWYHKETGEIY----------VDHEPPKDIENW----------------EQDPDVLDTW 452
Query: 1657 FDSGITHEAVLLERGLPK----------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPY 1806
F S + + + G P P D+ + G D W + G+ P+
Sbjct: 453 FSSALWPFSTM---GWPDTDSPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF 509
Query: 1807 KQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIAS-TDYSNEMSLSQEIL 1983
K L HG D GRKMSKSLGNG++P D+I GAD LR ++A+ + ++ S E +
Sbjct: 510 KDVLIHGLVRDAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKV 569
Query: 1984 KRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLS-DMIALDRWIVHRAFELQQTIKAAYT 2160
+ T + +I N +RF L N+ G T + LS + D WI+ R E +T+
Sbjct: 570 EATWNFANKIWNASRFALMNMGGM--TYEELDLSGEKTVADHWILTRLNETIETVTKLAE 627
Query: 2161 RYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIA 2340
+Y+F E +T+ NF DL Y+++ K LY +D +++ ++ + ++ +R +
Sbjct: 628 KYEFGERGRTLYNFIWDDLCDWYIEMAKLPLY--GDDEAAKKTTRSVLAYVLDNTMRLLH 685
Query: 2341 PILSFTADELWSYLPGDHADNVLFTTW 2421
P + F +E+W LP + +++ W
Sbjct: 686 PFMPFITEEIWQNLPHE-GESITVAPW 711
>gi|135181|sp|P11931|SYV_BACST VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|143797 (M16318) valyl-tRNA synthetase
[Bacillus stearothermophilus]
Length = 880
Score = 216 bits (545), Expect = 6e-55
Identities = 194/791 (24%), Positives = 327/791 (40%), Gaps = 16/791 (2%)
Frame = +1
Query: 49 PMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
P + D E E W + F+ + RP F + PP G++HLGHA + L+
Sbjct: 9 PPKYDHRAVEAGRYEWWLKGKFF-EATGDPNKRP-FTIVIPPPNVTGKLHLGHAWDTTLQ 66
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT---LDAVQFRQKCREYAAE 399
DII + K + G+D ++PG D G+ + +E+K + G++ L +F ++ ++ E
Sbjct: 67 DIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLRQQGLSRYDLGREKFLEETWKWKEE 126
Query: 400 QIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCG 579
R + +LG+ D+ TLD + KG + RG ++W
Sbjct: 127 YAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAVREVFVSLYRKGLIYRGEYIINWDPVTK 186
Query: 580 SALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASL 759
+AL++ E+ Y + + + YP D S + + TT P T+
Sbjct: 187 TALSDIEVVYKEVKGALYHMRYPLADGSGF---------------IEVATTRPETMLGDT 231
Query: 760 AISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHIL 939
A++V H R+ + +L I G
Sbjct: 232 AVAV-------------HPDDERYKHLIGK----------MVKLPIVG------------ 256
Query: 940 AHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDA 1119
R IP++ +V E G+GAV P H D ++ ++ L E ++
Sbjct: 257 -------REIPIIADEYVDMEFGSGAVKITPAHDPNDFEIGNRHNLPRILVMNEDGTMNE 309
Query: 1120 RGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVF 1299
+ GL ++ IV E HS H R I
Sbjct: 310 NA-----------MQYQGLDRFECRKQIVRDLQEQGVLFKIEEHVHSVGHSERSGAVIEP 358
Query: 1300 RATPQWFISMEQAALRSAALKAIT-HVTWYPQWGQARILSMIENRPDWTISRQRTWGVPI 1476
+ QWF+ M+ A + L+ V + P+ + L +EN W ISRQ WG I
Sbjct: 359 YLSTQWFVKMKPLAEAAIKLQQTDGKVQFVPERFEKTYLHWLENIRHWCISRQLWWGHRI 418
Query: 1477 PLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVW 1656
P + H+ +G + D + ++ W E+ D+LD W
Sbjct: 419 PAWYHKETGEIY----------VDHEPPKDIENW----------------EQDPDVLDTW 452
Query: 1657 FDSGITHEAVLLERGLPK----------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPY 1806
F S + + + G P P D+ + G D W + G+ P+
Sbjct: 453 FSSALWPFSTM---GWPDTDSPDYKRYYPTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPF 509
Query: 1807 KQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIAS-TDYSNEMSLSQEIL 1983
K L HG D GRKMSKSLGNG++P D+I GAD LR ++A+ + ++ S E +
Sbjct: 510 KDVLIHGLVRDAQGRKMSKSLGNGVDPMDVIDQYGADALRYFLATGSSPGQDLRFSTEKV 569
Query: 1984 KRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLS-DMIALDRWIVHRAFELQQTIKAAYT 2160
+ T + +I N +RF L N+ G T + LS + D WI+ R E +T+
Sbjct: 570 EATWNFANKIWNASRFALMNMGGM--TYEELDLSGEKTVADHWILTRLNETIETVTKLAE 627
Query: 2161 RYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIA 2340
+Y+F E +T+ NF DL Y+++ K LY +D +++ ++ + ++ +R +
Sbjct: 628 KYEFGERGRTLYNFIWDDLCDWYIEMAKLPLY--GDDEAAKKTTRSVLAYVLDNTMRLLH 685
Query: 2341 PILSFTADELWSYLPGDHADNVLFTTW 2421
P + F +E+W LP + +++ W
Sbjct: 686 PFMPFITEEIWQNLPHE-GESITVAPW 711
>gi|6094417|sp|O83998|SYV_TREPA VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|3323365 (AE001271) valyl-tRNA
synthetase (valS) [Treponema pallidum]
Length = 956
Score = 215 bits (541), Expect = 2e-54
Identities = 186/747 (24%), Positives = 310/747 (40%), Gaps = 17/747 (2%)
Frame = +1
Query: 142 GRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAI 321
G F++ PP G +H+GH +N +L+DI+I+ + + G +IPG D G+ + +
Sbjct: 58 GARTFVIAIPPPNITGVLHMGHCLNTVLQDIVIRYQRMAGACTLWIPGTDHAGIATQHVV 117
Query: 322 EKKYGKVGVTLDAV---QFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEA 492
E+ K G+ V QF + ++ R +++G DW TLD A
Sbjct: 118 ERALRKEGIHKREVTREQFVARTQQIKDSHQDTIRMQLRKMGASCDWTCERFTLDAGMSA 177
Query: 493 DEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALA 672
A + ++G L R V+WC CG+AL++ E+ + +K + V YP L +
Sbjct: 178 SVREAFVTLYERGLLYRSMYLVNWCPRCGTALSDDEVFHQEKDGALYYVRYPLLPRTEEE 237
Query: 673 AVFNATLPP----DVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXX 840
N PP V + I TT P T+ A +A++V P
Sbjct: 238 G--NGVPPPLGTAQVGETIIIATTRPETILADVAVAVHPD-------------------- 275
Query: 841 XXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAV 1020
A+ ++ + P +R +P++ ++V+ + GTG V
Sbjct: 276 ---------------------DARYQSLIGRKVCVPMV-NRIVPIIADSYVAQDFGTGMV 313
Query: 1021 HTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPL 1200
P H D + ++ L + LNP + +P GL +A
Sbjct: 314 KITPAHDPNDWDIGTRHSL---EAINMLNPDGSLNDQVPAA-------YRGLSCAQARIQ 363
Query: 1201 IVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVT 1380
IV + HS C+R + I + QWF+ M+ A ++ A V
Sbjct: 364 IVADLQAHGLLSREERIVHSVGVCYRCEAVIEPYLSLQWFVKMKPLASQALAAWKRADVQ 423
Query: 1381 WYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQ 1560
++P+ + + +E+ DW ISRQ WG IP++ A +Q RV+
Sbjct: 424 FHPKKWENTYVRWLEHIRDWCISRQLWWGHRIPVWY----------CAQCAQQTVSRVDV 473
Query: 1561 QGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSGITHEAVLLERGLPK---------P 1713
Q S D T+ D+LD WF S + + L G P+ P
Sbjct: 474 QRCAHCGSADITQ-----------DPDVLDTWFSSWLWPFSTL---GWPQETQKLRAFYP 519
Query: 1714 ADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQD 1893
+ D W ++ G+ P++ HG D+ GRKMSKSL NG++P
Sbjct: 520 TSAVITAYDIIFFWVARMIMAGLEFTQTVPFRDVYLHGLVRDKQGRKMSKSLNNGVDPLH 579
Query: 1894 IIKTLGADILRLWIA-STDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLH 2070
II+T GAD LR +A ++ + + K + ++ N +R++LGNL G ++
Sbjct: 580 IIRTYGADALRFTLAFMCAQGQDVLIEMDSFKMGSRFANKVWNASRYILGNLEG--RRVY 637
Query: 2071 LVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDR 2250
+ + LDRWI H E Q ++ A Y F + Q + F Y++ +K
Sbjct: 638 AIAHVSLTELDRWIFHTFNETVQQVRTALEAYRFNDAAQAVYEFFWNSFCDWYVEASKCS 697
Query: 2251 LYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
+ D + A + + L +R + P L F +E++ L
Sbjct: 698 F--QKPDEQEKDRAASVLCTLLEETLRLLHPFLPFVTEEIYRSL 739
>gi|2501015|sp|Q27707|SYI_NOSLO ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|598336 (L37097)
isoleucyl-tRNA synthetase [Nosema locustae]
Length = 628
Score = 208 bits (524), Expect = 2e-52
Identities = 150/564 (26%), Positives = 260/564 (45%), Gaps = 28/564 (4%)
Frame = +1
Query: 286 WDCHGLPIEIAIEKKYGKVGVT----LDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDW 453
WD HG+P+E I+K G GV + ++ ++CR+ + KR+G D+
Sbjct: 1 WDRHGVPVEYEIDKALGITGVKDIHDMGIRKYNKECRKIVLRYTKEWEAVVKRMGRWIDF 60
Query: 454 DAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALA--EAEIEYTDKTSP 627
Y+T+D F + +KG + RG + + + C + L+ EA Y D + P
Sbjct: 61 RNGYRTMDRSFMESIWHIFKMLYEKGSVYRGHRVMPYSTACSTPLSNFEANQNYKDVSDP 120
Query: 628 MVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGP 807
+ VA+P P L++ WTTTPWTLP+ +AI V + Y +
Sbjct: 121 SILVAFPLRKPFK-----------GYSLSLVAWTTTPWTLPSHMAILVNQSFIYAIFR-- 167
Query: 808 THSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAM-----EQHILAHPFYPDRTI- 969
+ ++ KG + +Q + + Y ++
Sbjct: 168 --------LKSAFFIMQRDRVNVYFKDAVVISEVKGHELLHLEHDQPFMYYNHYREKGFF 219
Query: 970 PLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPP 1149
+ + VS DGTG VH +PG G++D++ GL+ +P+D G + P
Sbjct: 220 RVYHADFVSEIDGTGVVHCSPGFGEDDYKAMTMPGLIKENELLP-SPLDENGRFNEEVPE 278
Query: 1150 FSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISM 1329
+ G+H+ A+ I+ +++H YP CWR TP++++ P WF+ +
Sbjct: 279 YK-----GMHVKDADQSIIKDLGKKILYEG--KVYHRYPFCWRSDTPLIYKLVPNWFVRV 331
Query: 1330 EQAALRSAALKAITHVTWYPQW-GQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGA 1506
++ R L++ + + W P+ G+ + + + DW+ISR R WG PIPL+ H
Sbjct: 332 KREIPR--LLESNSTINWIPESIGEHKFKNWLSEARDWSISRNRFWGTPIPLW---HCDG 386
Query: 1507 PH------PRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSG 1668
+ + L + D + ++ VD ++ + ++Y +I ++ D WF+SG
Sbjct: 387 KYICIGSIEELSRLSGRKIDDIHRENVD-------DVVICKDGEKYRRIEEVFDCWFESG 439
Query: 1669 ITHEAVLLERGLP-------KPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHG 1827
A +R P PAD EG DQ RGWF + + + ++ C+ +G
Sbjct: 440 CMPYA---QRHWPFECDNLCLPADFVAEGVDQTRGWFYTMHVISTVLLAKPRFRNCIVNG 496
Query: 1828 FTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTD--YSNEMSLSQE 1977
+ +KMSK L N +P D+I AD LRL++ S+ + M S+E
Sbjct: 497 IVLASDKKKMSKRLKNYPDPMDVINRYSADSLRLYLISSPVVMAENMCFSEE 548
>gi|3986754 (AF109905) G7A [Mus musculus]
Length = 1263
Score = 194 bits (487), Expect = 4e-48
Identities = 199/763 (26%), Positives = 323/763 (42%), Gaps = 67/763 (8%)
Frame = +1
Query: 97 WERDDF----YAQLRAHAKG-RPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDG 261
WER F Y + A R +F++ PP G +HLGHA+ ++D + + + G
Sbjct: 312 WERQGFFKPEYGRPSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRG 371
Query: 262 FDAPYIPGWDCHGLPIEIAIEKKYGKV-GVT---LDAVQFRQKCREYAAEQIQLQRRDFK 429
+ PG D G+ ++ +EKK K G+ L F ++ ++ AE+ K
Sbjct: 372 ETTLWNPGCDHAGIATQVVVEKKLWKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLK 431
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI-- 603
+LG DWD T+D + A A ++ ++G + R T+ V+W SA+++ E+
Sbjct: 432 KLGSSLDWDRACFTMDPKLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDK 491
Query: 604 -EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPT 780
E T +T V ++ L + D V + TT T+ +A++V P
Sbjct: 492 KELTGRTLLPVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAVHP- 550
Query: 781 LDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPD 960
+ P + ++ + HPF
Sbjct: 551 ------KDPRYQH----------------------------------LKGKCVVHPFL-S 569
Query: 961 RTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPT 1140
R++P++ + V E GTGAV P H Q D++V Q++ L ++ +D++G +
Sbjct: 570 RSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL------EAISIMDSKGALINV 623
Query: 1141 TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
PPF GL ++A ++ + P C R K + PQW+
Sbjct: 624 PPPF-----LGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWY 678
Query: 1321 ISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPL-FVHRH 1497
+ + A ++A + P+ Q S ++N DW ISRQ WG IP F+ H
Sbjct: 679 VRCGEMAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVH 738
Query: 1498 SGA------PHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWF 1659
A P R R A+ E+ + S D+ L E D+LD WF
Sbjct: 739 DPAVPPGEDPDGRYWVSGRTEAEAREKAAREFGVSPDKISLQQDE--------DVLDTWF 790
Query: 1660 DSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQ 1812
SG+ ++ G P P L G D W ++ G+ + P+++
Sbjct: 791 SSGLFPFSIF---GWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFRE 847
Query: 1813 CLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTL---------------------------- 1908
H D HGRKMSKSLGN I+P D+I +
Sbjct: 848 VYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLYDQLLNSNLDPSEVEKAKEGQKA 907
Query: 1909 ---------GADILRLWI-ASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNL-HGF 2055
G D LR + A T +++L + ++ N +F L L GF
Sbjct: 908 DFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGF 967
Query: 2056 DPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLD 2235
P+ P +DRWI R E + + YDF I +F +L +YL+
Sbjct: 968 VPSATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYELCDVYLE 1027
Query: 2236 VTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
K L + D A+ +Y +R ++P + F +EL+ LP
Sbjct: 1028 CLKPVLNGV--DQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLP 1075
>gi|4590328|gb|AAD26531.1|AF087141_1 (AF087141) valyl-tRNA synthetase
[Mus musculus] >gi|4590330|gb|AAD26532.1|AF087680_1
(AF087680) valyl-tRNA synthetase [Mus musculus]
Length = 1263
Score = 193 bits (486), Expect = 5e-48
Identities = 199/763 (26%), Positives = 323/763 (42%), Gaps = 67/763 (8%)
Frame = +1
Query: 97 WERDDF----YAQLRAHAKG-RPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDG 261
WER F Y + A R +F++ PP G +HLGHA+ ++D + + + G
Sbjct: 312 WERQGFFKPEYGRPSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRG 371
Query: 262 FDAPYIPGWDCHGLPIEIAIEKKYGKV-GVT---LDAVQFRQKCREYAAEQIQLQRRDFK 429
+ PG D G+ ++ +EKK K G+ L F ++ ++ AE+ K
Sbjct: 372 ETTLWNPGCDHAGIATQVVVEKKLWKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLK 431
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI-- 603
+LG DWD T+D + A A ++ ++G + R T+ V+W SA+++ E+
Sbjct: 432 KLGSSLDWDRACFTMDPKLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDK 491
Query: 604 -EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPT 780
E T +T V ++ L + D V + TT T+ +A++V P
Sbjct: 492 KELTGRTLLPVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAVHP- 550
Query: 781 LDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPD 960
+ P + ++ + HPF
Sbjct: 551 ------KDPRYQH----------------------------------LKGKCVVHPFL-S 569
Query: 961 RTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPT 1140
R++P++ + V E GTGAV P H Q D++V Q++ L ++ +D++G +
Sbjct: 570 RSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL------EAISIMDSKGALINV 623
Query: 1141 TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
PPF GL ++A ++ + P C R K + PQW+
Sbjct: 624 PPPF-----LGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWY 678
Query: 1321 ISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPL-FVHRH 1497
+ + A ++A + P+ Q S ++N DW ISRQ WG IP F+ H
Sbjct: 679 VRCGEMAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVH 738
Query: 1498 SGA------PHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWF 1659
A P R R A+ E+ + S D+ L E D+LD WF
Sbjct: 739 DPAVPPGEDPDGRYWVSGRTEAEAREKAAREFGVSPDKISLQQDE--------DVLDTWF 790
Query: 1660 DSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQ 1812
SG+ ++ G P P L G D W ++ G+ + P+++
Sbjct: 791 SSGLFPFSIF---GWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFRE 847
Query: 1813 CLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTL---------------------------- 1908
H D HGRKMSKSLGN I+P D+I +
Sbjct: 848 VYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLYDQLLNSNLDPSEVEKAKEGQKA 907
Query: 1909 ---------GADILRLWI-ASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNL-HGF 2055
G D LR + A T +++L + ++ N +F L L GF
Sbjct: 908 DFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFRLRGLGKGF 967
Query: 2056 DPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLD 2235
P+ P +DRWI R E + + YDF I +F +L +YL+
Sbjct: 968 VPSATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYELCDVYLE 1027
Query: 2236 VTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
K L + D A+ +Y +R ++P + F +EL+ LP
Sbjct: 1028 CLKPVLNGV--DQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLP 1075
>gi|2829824|sp|P96142|SYV_THETH VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|1814011|emb|CAA71837| (Y10900)
valyl-tRNA synthetase [Thermus thermophilus]
Length = 854
Score = 190 bits (477), Expect = 6e-47
Identities = 192/782 (24%), Positives = 318/782 (40%), Gaps = 17/782 (2%)
Frame = +1
Query: 43 DFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKI 222
D P D EP E+W ++ F A ++ G+P F++ PP G +H+GHA++
Sbjct: 2 DLPKAYDPKSVEPKWAEKWAKNPFVANPKS---GKPPFVIFMPPPNVTGSLHMGHALDNS 58
Query: 223 LKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK---KYGKVGVTLDAVQFRQKCREYA 393
L+D +I+ K + GF+A ++PG D G+ ++ +E+ K GK L +F ++ ++
Sbjct: 59 LQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGKTRHDLGREKFLERVWQWK 118
Query: 394 AEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFD 573
E + KRLG DW T+D A A ++ +G R + V+WC
Sbjct: 119 EESGGTILKQLKRLGASADWSREAFTMDENAPAVPY-AFSRYYHEGLAYRAPRLVNWCPR 177
Query: 574 CGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLA--VPIWTTTPWTL 747
C + L++ E+E T P Y TL +V+ + I T P T+
Sbjct: 178 CETTLSDLEVE----TEPTPGKLY--------------TLRYEVEGGGFIEIATVRPETV 219
Query: 748 PASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAME 927
A AI+V P + RY
Sbjct: 220 FADQAIAVHPEDE----------------------------RY----------------- 234
Query: 928 QHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELN 1107
+H+L IP+L V + GTGA+ P H D+++ +++GL ++
Sbjct: 235 RHLLGKR----ARIPILADPAVEKDFGTGALKVTPAHDPLDYEIGERHGL------KPVS 284
Query: 1108 PVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKT 1287
++ G P + L GL ++A V+ + + C R T
Sbjct: 285 VINLEGRMEGERVPEA---LRGLDRFEARRKAVELFREAGHLVKEEDYTIALATCSRCGT 341
Query: 1288 PIVFRATPQWFISMEQAALRSAALKAITH--VTWYPQWGQARILSMIENRPDWTISRQRT 1461
PI + PQW++ M A LK + + + P+ + + +EN DW ISRQ
Sbjct: 342 PIEYAIFPQWWLRMRPLA--EEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNISRQLW 399
Query: 1462 WGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITD 1641
WG IP + A + R E+ Y D T + + ++ D
Sbjct: 400 WGHQIPAWYCEDCQAVN----------VPRPER------YLEDPTSCEACGSPRLKRDED 443
Query: 1642 ILDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDN 1794
+ D WF S + + L G P+ P D+ + G D W ++G
Sbjct: 444 VFDTWFSSALWPLSTL---GWPEETEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFMG 500
Query: 1795 AAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRL-WIASTDYSNEMSLS 1971
P+K L HG +D+ G+KMSKS GN I+P ++++ GAD LR I ++ L
Sbjct: 501 ERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLD 560
Query: 1972 QEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKA 2151
L+ + ++ N ARF+L + GF L+ DR++ R + I A
Sbjct: 561 LRWLEMARNFANKLYNAARFVLLSREGFQAKEDTPTLA-----DRFMRTRLSRGVEEITA 615
Query: 2152 AYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVR 2331
Y D A+ + + + YL+ K L G + + A ++
Sbjct: 616 LYEALDLAQAAREVYELVWSEFCDWYLEAAKPAL------KAGNAHTLRTLEEVLAVLLK 669
Query: 2332 WIAPILSFTADELWSYLPG 2388
+ P++ F EL+ L G
Sbjct: 670 LLHPMMPFLTSELYQALTG 688
>gi|5454158|ref|NP_006286.1|| valyl-tRNA synthetase 2
>gi|4529896|gb|AAD21819.1| (AF134726) G7A [Homo sapiens]
Length = 1264
Score = 189 bits (474), Expect = 1e-46
Identities = 197/763 (25%), Positives = 325/763 (41%), Gaps = 67/763 (8%)
Frame = +1
Query: 97 WERDDFYAQLRAH-----AKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDG 261
WE+ F+ A R +F++ PP G +HLGHA+ ++D + + + G
Sbjct: 313 WEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRG 372
Query: 262 FDAPYIPGWDCHGLPIEIAIEKK-YGKVGVT---LDAVQFRQKCREYAAEQIQLQRRDFK 429
+ PG D G+ ++ +EKK + + G++ L F Q+ ++ E+ K
Sbjct: 373 ETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLK 432
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI-- 603
+LG DWD T+D + A A ++ ++G + R T+ V+W SA+++ E+
Sbjct: 433 KLGSSLDWDRACFTMDPKLSAAVTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDK 492
Query: 604 -EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPT 780
E T +T V ++ L + D V + TT T+ +A++V P
Sbjct: 493 KELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAVHPK 552
Query: 781 LDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPD 960
RY H K + HPF
Sbjct: 553 ----------------------------DTRYQ------HLKGKN-------VIHPFL-S 570
Query: 961 RTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPT 1140
R++P++ V + GTGAV P H Q D++V Q++GL ++ +D+RG +
Sbjct: 571 RSLPIVFDEFVDMDFGTGAVKITPAHDQNDYEVGQRHGL------EAISIMDSRGALINV 624
Query: 1141 TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
PPF GL ++A ++ + P C R K + PQW+
Sbjct: 625 PPPF-----LGLPRFEARKAVLVALKERGLFRGIEDNPMVVPLCNRSKDVVEPLLRPQWY 679
Query: 1321 ISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHS 1500
+ + A ++A + P+ Q + ++N +W ISRQ WG IP + S
Sbjct: 680 VRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVS 739
Query: 1501 GA-------PHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWF 1659
P R R A+ E+ + S D+ L E D+LD WF
Sbjct: 740 DPAVPPGEDPDGRYWVSGRNEAEAREKAAKEFGVSPDKISLQQDE--------DVLDTWF 791
Query: 1660 DSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQ 1812
SG+ ++L G P P L G D W ++ G+ + P+++
Sbjct: 792 SSGLFPLSIL---GWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGRLPFRE 848
Query: 1813 CLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYS-NEMSLSQEILKR 1989
H D HGRKMSKSLGN I+P D+I + L + +++ +E+ ++E K
Sbjct: 849 VYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHNQLLNSNLDPSEVEKAKEGQKA 908
Query: 1990 T---------TDAYR----------------------------RIRNTARFLLGNL-HGF 2055
TDA R ++ N +F L L GF
Sbjct: 909 DFPAGIPECGTDALRFGLCAYMSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGF 968
Query: 2056 DPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLD 2235
P+ P +DRWI R E + + YDF + +F +L +YL+
Sbjct: 969 VPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYELCDVYLE 1028
Query: 2236 VTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
K L + D A+ +Y +R ++P + F +EL+ LP
Sbjct: 1029 CLKPVLNGV--DQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLP 1076
>gi|6226199|sp|Q9ZCN6|SYV_RICPR VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|3861224|emb|CAA15124| (AJ235272)
VALYL-TRNA SYNTHETASE (valS) [Rickettsia prowazekii]
Length = 814
Score = 188 bits (473), Expect = 2e-46
Identities = 178/780 (22%), Positives = 322/780 (40%), Gaps = 25/780 (3%)
Frame = +1
Query: 43 DFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKI 222
+FP + + E W+ YA +K ++++ PP +GQ+H+GH +
Sbjct: 3 EFPKHYNFTENEKKWQNIWQELQIYAYDPNISKAE-IYIVDTPPPTVSGQLHIGHIYSYT 61
Query: 223 LKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQ 402
D I++ + + G + Y G+D +GLP E +EK+ ++ +F + C E +
Sbjct: 62 QTDFIVRFQRMIGKNIFYPIGFDDNGLPTERLVEKQKQIKAYNMERDEFIKICLEVVKNE 121
Query: 403 IQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGS 582
R FK++ + DW Y+T+ + ++ KG + R +P+ W G+
Sbjct: 122 EAKFRSLFKQIALSVDWSLEYQTISPLSRKISQMSFLDLLHKGEVYRANQPILWDTVDGT 181
Query: 583 ALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLA 762
ALA+A+IE K S M + + L I TT P LPA +A
Sbjct: 182 ALAQADIEDKQKISSMNYITFKTEQGDQLT----------------IATTRPELLPACVA 225
Query: 763 ISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILA 942
+ P RY H + K A
Sbjct: 226 VFYHPD----------------------------DVRYK------HLADKSAIT------ 245
Query: 943 HPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDAR 1122
P + ++ +P+L V + GTG V Q D ++ + L P+
Sbjct: 246 -PLFNEK-VPILADPLVQQDKGTGLVMCCTFGDQTDITWWKSHNL----------PLKTI 293
Query: 1123 GVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFR 1302
T +L + GL I +A I+D E+ + R P+
Sbjct: 294 ITKKGTINFPHKLDIDGLTIKEARTKIIDILKEQSLLTKQEEIIQTVKCAERSGAPLEIL 353
Query: 1303 ATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRP-DWTISRQRTWGVPIP 1479
QWFI + + A LK + WYP+ + R+ + I + DW ISRQR +GVP P
Sbjct: 354 TVTQWFI--KTITHKEALLKRTNELNWYPKNMKMRLENWINSLSWDWCISRQRYFGVPFP 411
Query: 1480 LFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTEL-------LGTEADQYEKIT 1638
++ + R+ ++G ++ + Q + +G ++ +
Sbjct: 412 IWYSK------------------RIGEEGKILYADISQLPVDPLKDLPIGYSKEEVDPDL 453
Query: 1639 DILDVWFDS---------GITHEAVLLERGLPK--PADLYLEGADQHRGWFQSSLLTGVA 1785
D++D W S GI+ + + + K P DL + + R W ++L
Sbjct: 454 DVMDTWATSSVSPQLSTYGISEDLAINKVRHDKLFPMDLRPQAHEIIRTWAFYTILKSHL 513
Query: 1786 MDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMS 1965
N P+K + G+ + + KMSKS GN + P+ +++ GAD++R W A++ + +
Sbjct: 514 HQNILPWKNIMVSGWCLAEDRSKMSKSKGNVLVPEKLLERYGADVIRYWSANSKLGADTA 573
Query: 1966 LSQEILKRTTDAYRRIRNTARFL---LGNLHGFDPTLHLVPLSDMIA--LDRWIVHRAFE 2130
S++++K ++ N A+F+ L D + L + + I D+W++++
Sbjct: 574 YSEDVMKNGKRLVNKLWNAAKFVSIHFDKLTSEDKKVSLFDIKEKITNEFDQWMINKLVA 633
Query: 2131 LQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAP-GRRSAQTAMY 2307
L + A Y++A + F YL+++K R Y P G+ S+ +Y
Sbjct: 634 LVKLATNALQNYEYANAIYLTEKFFWSIFCDNYLEISKTRSYDEANKNPQGQYSSILTLY 693
Query: 2308 HLTAAFVRWIAPILSFTADELWSYL 2382
H+ ++ AP + +EL+ L
Sbjct: 694 HIMQTLLKLFAPFMPHITEELYQIL 718
>gi|1061310 (M98326) valyl-tRNA synthetase [Homo sapiens]
Length = 1063
Score = 187 bits (471), Expect = 3e-46
Identities = 197/763 (25%), Positives = 326/763 (41%), Gaps = 67/763 (8%)
Frame = +1
Query: 97 WERDDFYAQLRAH---AKGRP--LFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDG 261
WE+ F+ + G P +F++ PP G +HLGHA+ ++D + + + G
Sbjct: 113 WEQQGFFKPEYGRPNVSAGNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRG 172
Query: 262 FDAPYIPGWDCHGLPIEIAIEKK-YGKVGVT---LDAVQFRQKCREYAAEQIQLQRRDFK 429
+ PG D G+ ++ +EKK + + G++ L F Q+ ++ E+ K
Sbjct: 173 ETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLK 232
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI-- 603
+LG DWD T+D + A A ++ ++G + R T+ V+W SA+++ E+
Sbjct: 233 KLGSSLDWDRACFTMDPKLSAAVTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDK 292
Query: 604 -EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPT 780
E T +T V ++ L + D V + TT T+ +A++V P
Sbjct: 293 KELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAVHPK 352
Query: 781 LDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPD 960
RY H K + HPF
Sbjct: 353 ----------------------------DTRYQ------HLKGKN-------VIHPFL-S 370
Query: 961 RTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPT 1140
R++P++ V + GTGAV P H Q D++V Q++GL ++ +D+RG +
Sbjct: 371 RSLPIVFDEFVDMDFGTGAVKITPAHDQNDYEVGQRHGL------EAISIMDSRGALINV 424
Query: 1141 TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
PPF GL ++A ++ + P C R K + PQW+
Sbjct: 425 PPPF-----LGLPRFEARKAVLVALKERGLFRGIEDNPMVVPLCNRSKDVVEPLLRPQWY 479
Query: 1321 ISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHS 1500
+ + A ++A + P+ Q + ++N +W ISRQ WG IP + S
Sbjct: 480 VRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVS 539
Query: 1501 GA-------PHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWF 1659
P R R A+ E+ + S D+ L E D+LD WF
Sbjct: 540 DPAVPPGEDPDGRYWVSGRNEAEAREKAAKEFGVSPDKISLQQDE--------DVLDTWF 591
Query: 1660 DSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQ 1812
SG+ ++L G P P L G D W ++ G+ + P+++
Sbjct: 592 SSGLFPLSIL---GWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGRLPFRE 648
Query: 1813 CLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYS-NEMSLSQEILKR 1989
H D HGRKMSKSLGN I+P D+I + L + +++ +E+ ++E K
Sbjct: 649 VYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHNQLLNSNLDPSEVEKAKEGQKA 708
Query: 1990 T---------TDAYR----------------------------RIRNTARFLLGNL-HGF 2055
TDA R ++ N +F L L GF
Sbjct: 709 DFPAGIPECGTDALRFGLCAYMSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGF 768
Query: 2056 DPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLD 2235
P+ P +DRWI R E + + YDF + +F +L +YL+
Sbjct: 769 VPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYELCDVYLE 828
Query: 2236 VTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
K L + D A+ +Y +R ++P + F +EL+ LP
Sbjct: 829 CLKPVLNGV--DQVAAECARQTLYTCLDVGLRLLSPFIPFVTEELFQRLP 876
>gi|1351180|sp|P26640|SYV_HUMAN VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS)
Length = 1263
Score = 187 bits (471), Expect = 3e-46
Identities = 197/763 (25%), Positives = 326/763 (41%), Gaps = 67/763 (8%)
Frame = +1
Query: 97 WERDDFYAQLRAH---AKGRP--LFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDG 261
WE+ F+ + G P +F++ PP G +HLGHA+ ++D + + + G
Sbjct: 313 WEQQGFFKPEYGRPNVSAGNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRG 372
Query: 262 FDAPYIPGWDCHGLPIEIAIEKK-YGKVGVT---LDAVQFRQKCREYAAEQIQLQRRDFK 429
+ PG D G+ ++ +EKK + + G++ L F Q+ ++ E+ K
Sbjct: 373 ETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLK 432
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI-- 603
+LG DWD T+D + A A ++ ++G + R T+ V+W SA+++ E+
Sbjct: 433 KLGSSLDWDRACFTMDPKLSAAVTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDK 492
Query: 604 -EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPT 780
E T +T V ++ L + D V + TT T+ +A++V P
Sbjct: 493 KELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAVHPK 552
Query: 781 LDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPD 960
RY H K + HPF
Sbjct: 553 ----------------------------DTRYQ------HLKGKN-------VIHPFL-S 570
Query: 961 RTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPT 1140
R++P++ V + GTGAV P H Q D++V Q++GL ++ +D+RG +
Sbjct: 571 RSLPIVFDEFVDMDFGTGAVKITPAHDQNDYEVGQRHGL------EAISIMDSRGALINV 624
Query: 1141 TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
PPF GL ++A ++ + P C R K + PQW+
Sbjct: 625 PPPF-----LGLPRFEARKAVLVALKERGLFRGIEDNPMVVPLCNRSKDVVEPLLRPQWY 679
Query: 1321 ISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHS 1500
+ + A ++A + P+ Q + ++N +W ISRQ WG IP + S
Sbjct: 680 VRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVS 739
Query: 1501 GA-------PHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWF 1659
P R R A+ E+ + S D+ L E D+LD WF
Sbjct: 740 DPAVPPGEDPDGRYWVSGRNEAEAREKAAKEFGVSPDKISLQQDE--------DVLDTWF 791
Query: 1660 DSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQ 1812
SG+ ++L G P P L G D W ++ G+ + P+++
Sbjct: 792 SSGLFPLSIL---GWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGRLPFRE 848
Query: 1813 CLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYS-NEMSLSQEILKR 1989
H D HGRKMSKSLGN I+P D+I + L + +++ +E+ ++E K
Sbjct: 849 VYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHNQLLNSNLDPSEVEKAKEGQKA 908
Query: 1990 T---------TDAYR----------------------------RIRNTARFLLGNL-HGF 2055
TDA R ++ N +F L L GF
Sbjct: 909 DFPAGIPECGTDALRFGLCAYMSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGF 968
Query: 2056 DPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLD 2235
P+ P +DRWI R E + + YDF + +F +L +YL+
Sbjct: 969 VPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYELCDVYLE 1028
Query: 2236 VTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
K L + D A+ +Y +R ++P + F +EL+ LP
Sbjct: 1029 CLKPVLNGV--DQVAAECARQTLYTCLDVGLRLLSPFIPFVTEELFQRLP 1076
>gi|484950|pir||PN0474 valine--tRNA ligase (EC 6.1.1.9) (version 2) -
human (fragment)
Length = 1051
Score = 185 bits (464), Expect = 2e-45
Identities = 194/763 (25%), Positives = 317/763 (41%), Gaps = 66/763 (8%)
Frame = +1
Query: 97 WERDDF----YAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGF 264
WE+ F Y L R +F++ PP G +HLGHA+ ++D + + + G
Sbjct: 113 WEQQGFFKPEYGLLMCQQNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGE 172
Query: 265 DAPYIPGWDCHGLPIEIAIEKKYGK-VGVTLDAV--QFRQKCREYAAEQIQLQRRDFKRL 435
+ PG D G+ ++ +EKK + G++ + F Q+ ++ E+ K+L
Sbjct: 173 TTLWNPGCDHAGIATQVVVEKKLWRDEGLSRHQLVEAFLQEVWKWKEEKGDRIYHQLKKL 232
Query: 436 GIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI---E 606
G DWD T+D + A A ++ ++G + R T+ V+W SA+++ E+ E
Sbjct: 233 GSSLDWDRACFTMDPKLSAAVTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDKKE 292
Query: 607 YTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLD 786
T +T V ++ L D V + TT T+ +A++V P
Sbjct: 293 LTGRTLLSVPGYKEKVEFGVLVPFAYKVQGSDSDEEVVVATTRIETMLGDVAVAVHPK-- 350
Query: 787 YVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRT 966
RY H K + HPF R+
Sbjct: 351 --------------------------DTRYQ------HLKGKN-------VIHPFL-SRS 370
Query: 967 IPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTP 1146
+P++ V + GTGAV P H Q D++V Q++GL ++ +D+RG + P
Sbjct: 371 LPIVFDEFVDMDFGTGAVKITPAHDQNDYEVGQRHGL------EAISIMDSRGALINVPP 424
Query: 1147 PFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFIS 1326
PF GL ++A ++ + P C R K + PQW++
Sbjct: 425 PF-----LGLPRFEARKAVLVALKERGLFRGIEDNPMVVPLCNRSKDVVEPLLRPQWYVR 479
Query: 1327 MEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGA 1506
+ A ++A + P+ Q + ++N +W ISRQ WG IP + S
Sbjct: 480 CGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVSDP 539
Query: 1507 -------PHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDS 1665
P R R A+ E+ + S D+ L E D+LD WF S
Sbjct: 540 AVPPGEDPDGRYWVSGRNEAEAREKAAKEFGVSPDKISLQQDE--------DVLDTWFSS 591
Query: 1666 GITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCL 1818
G+ ++L G P P L G D W ++ G+ + P+++
Sbjct: 592 GLFPLSIL---GWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGRLPFREVY 648
Query: 1819 THGFTVDQHGRKMSKSLGNGIEPQDIIKTL------------------------------ 1908
H D HGRKMSKSLGN I+P D+I +
Sbjct: 649 LHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQRLLHNQLLNSNLDPSEVEKPKKRDRKL 708
Query: 1909 --------GADILRLWI-ASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNL-HGFD 2058
G D LR + A +++L + ++ N +F L L GF
Sbjct: 709 TPSGIPECGTDALRFGLCAYMSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGFL 768
Query: 2059 PTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDV 2238
P+ P +DRWI R E + + YDF + + + +L +YL+
Sbjct: 769 PSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTSQYSLWLYELCDVYLEC 828
Query: 2239 TKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
K L + D A+ +Y VR ++ + F +EL+ LP
Sbjct: 829 LKPVLNGV--DQVAAECARQTLYTCLDVAVRLLSTFIPFVTEELFQRLP 875
>gi|2501067|sp|Q55522|SYV_SYNY3 VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|1001391|dbj|BAA10881| (D64006)
valyl-tRNA synthetase [Synechocystis sp.]
Length = 910
Score = 182 bits (458), Expect = 1e-44
Identities = 187/772 (24%), Positives = 312/772 (40%), Gaps = 41/772 (5%)
Frame = +1
Query: 67 PKREPAILER-----WERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKD 231
P+ EP + E WE + + G P ++ PP G +H+GHA L D
Sbjct: 7 PQYEPTVTEAKWQTAWEESHAF-KADPDRPGEPYCVVIP-PPNVTGSLHMGHAFESSLID 64
Query: 232 IIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAV---QFRQKCREYAAEQ 402
+++ + G + ++PG D + ++ +E++ G T D + +F ++ ++ AE
Sbjct: 65 TLVRYHRMRGDNTLWLPGTDHASIAVQTILERQLKAEGKTRDDLGREKFLERAWQWKAES 124
Query: 403 IQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGS 582
+RLG+ DW T+D A K+ ++G + RG V+WC S
Sbjct: 125 GSTIVNQLRRLGVSVDWTRERFTMDEGLSQAVKTAFIKLYEEGLIYRGNYLVNWCPASQS 184
Query: 583 ALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLA 762
A+++ E+E + + YP D S V TT P T+
Sbjct: 185 AVSDLEVENQEVDGHLWYFRYPLTDGSGELVVA---------------TTRPETMLGDTG 229
Query: 763 ISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILA 942
++V P RY AAM +
Sbjct: 230 VAVNP----------------------------HDERY-------------AAMVGKTIT 248
Query: 943 HPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDAR 1122
P +R IP++ V E GTG V P H D + Q++ L +N ++
Sbjct: 249 LPLV-NREIPIVADELVDPEFGTGCVKVTPAHDPNDFVMGQRHNL------PFINLLNKD 301
Query: 1123 GVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFR 1302
G F AG ++A +V HS P+ R K P+
Sbjct: 302 GSLNENGGDF-----AGQDRFEARKNVVQALEAQGFLVKIEPYRHSVPYGDRGKVPVEPL 356
Query: 1303 ATPQWFISMEQAALRS-AALKAITHVTWYPQ-WGQARILSMIENRPDWTISRQRTWGVPI 1476
+ QWF+ +E A + A L + P+ WG+ +++ + DW ISRQ WG I
Sbjct: 357 LSTQWFVKIESLAQNALACLDEDNSPNFVPERWGKVYRDWLVKLK-DWCISRQLWWGHQI 415
Query: 1477 PLF--VHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQY------EK 1632
P + + +GA + ++ + D+ E L +Y ++
Sbjct: 416 PAWYVISETNGAITDHTPFIV----------------AYDEAEALAKAKAEYGPTVQLQQ 459
Query: 1633 ITDILDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVA 1785
D+LD WF SG+ + + G P+ P + G D W +
Sbjct: 460 DPDVLDTWFSSGLWPFSTM---GWPEQTDDLAKYYPTSTLVTGFDIIFFWVARMTMMAGH 516
Query: 1786 MDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWI---------- 1935
P+K HG D++G+KMSKS NGI+P +I G D LR +
Sbjct: 517 FTGQIPFKDVYIHGLVRDENGKKMSKSANNGIDPLLLINKYGTDALRYTLIREVAGAGQD 576
Query: 1936 ASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDP-TLHLVPLSDMIALDRWI 2112
S Y + S+ + + + + ++ N ARF++ NL G P L L P D+ DRWI
Sbjct: 577 ISLQYDRQKDESESV-EASRNFANKLWNAARFVMMNLDGQTPQQLGLAPGEDLELADRWI 635
Query: 2113 VHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRS- 2289
+ R ++ Q + Y E + + F D Y+++ K RL+ G +
Sbjct: 636 LSRLNQVIQQTREQIEDYGLGEAAKGLYEFIWGDFCDWYIELAKPRLWNKEGGDVGTQRQ 695
Query: 2290 --AQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
A+ + H + ++ + P + +ELW L
Sbjct: 696 LVARQVLAHTLDSIIKLLHPFMPHITEELWQTL 728
>gi|6226198|sp|O53175|SYV_MYCTU VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|2791488|emb|CAA16025| (AL021246) valS
[Mycobacterium tuberculosis]
Length = 876
Score = 182 bits (457), Expect = 1e-44
Identities = 184/780 (23%), Positives = 310/780 (39%), Gaps = 26/780 (3%)
Frame = +1
Query: 49 PMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILK 228
P D E AI ++W ++ K P + + PP G +H+GHA+ +
Sbjct: 3 PKSWDPAAMESAIYQKWLDAGYFTADPTSTK--PAYSIVLPPPNVTGSLHMGHALEHTMM 60
Query: 229 DIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKY---GKVGVTLDAVQFRQKCREYAAE 399
D + + K + G++ + PG D G+ + +E++ GK L F K ++ E
Sbjct: 61 DALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQLAVDGKTKEDLGRELFVDKVWDWKRE 120
Query: 400 QIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCG 579
+RLG DW T+D ++ D G + R + V+W
Sbjct: 121 SGGAIGGQMRRLGDGVDWSRDRFTMDEGLSRAVRTIFKRLYDAGLIYRAERLVNWSPVLQ 180
Query: 580 SALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASL 759
+A+++ E+ Y D +V Y +LD D Q + + TT T+
Sbjct: 181 TAISDLEVNYRDVEGELVSFRYGSLD--------------DSQPHIVVATTRVETMLGDT 226
Query: 760 AISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHIL 939
AI+V H R+ L
Sbjct: 227 AIAV-------------HPDDERYRHLVGTS----------------------------L 245
Query: 940 AHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDA 1119
AHPF DR + ++ HV E GTGAV P H D ++ G+ + + +D
Sbjct: 246 AHPFV-DRELAIVADEHVDPEFGTGAVKVTPAHDPNDFEI----GVRHQLPMPSI--LDT 298
Query: 1120 RGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMH-HSYPHCWRHKTPIV 1296
+G + T F G+ ++A + + HS H R PI
Sbjct: 299 KGRIVDTGTRFD-----GMDRFEARVAVRQALAAQGRVVEEKRPYLHSVGHSERSGEPIE 353
Query: 1297 FRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPI 1476
R + QW++ +E A + +P + R S +++ DW ISRQ WG I
Sbjct: 354 PRLSLQWWVRVESLAKAAGDAVRNGDTVIHPASMEPRWFSWVDDMHDWCISRQLWWGHRI 413
Query: 1477 PLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVW 1656
P++ G + D+T G E D D+LD W
Sbjct: 414 PIW----------------------YGPDGEQVCVGPDETPPQGWEQD-----PDVLDTW 446
Query: 1657 FDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAM-DNAA-- 1800
F S + + L G P P + + G D W ++ G + D+AA
Sbjct: 447 FSSALWPFSTL---GWPDKTAELEKFYPTSVLVTGYDILFFWVARMMMFGTFVGDDAAIT 503
Query: 1801 ---------PYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIA-STDY 1950
P+ HG D+ GRKMSKS GN I+P D ++ GAD LR +A
Sbjct: 504 LDGRRGPQVPFTDVFLHGLIRDESGRKMSKSKGNVIDPLDWVEMFGADALRFTLARGASP 563
Query: 1951 SNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFE 2130
++++S++ ++ + + ++ N R+ L L+G P L +++ DRWI+ R E
Sbjct: 564 GGDLAVSEDAVRASRNFGTKLFNATRYAL--LNGAAPA-PLPSPNELTDADRWILGRLEE 620
Query: 2131 LQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYH 2310
++ + +A+ Y+F+ +++ +F + YL++ K +L A G +
Sbjct: 621 VRAEVDSAFDGYEFSRACESLYHFAWDEFCDWYLELAKTQL------AQGLTHTTAVLAA 674
Query: 2311 LTAAFVRWIAPILSFTADELWSYLPG 2388
+R + P++ F + LW L G
Sbjct: 675 GLDTLLRLLHPVIPFLTEALWLALTG 700
>gi|6425518|emb|CAB60428.1| (AL110500) cDNA EST EMBL:D67292 comes from
this gene; cDNA EST yk290a12.5 comes from this gene; cDNA
EST yk322e9.5 comes from this gene; cDNA EST yk443b11.5
comes from this gene; cDNA EST yk286e6.5 comes from this
gene; cDNA ...
Length = 1050
Score = 181 bits (454), Expect = 3e-44
Identities = 193/763 (25%), Positives = 320/763 (41%), Gaps = 66/763 (8%)
Frame = +1
Query: 97 WERDDFYA-----QLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDG 261
WE++ F+ +L + F + PP G +H+GHA+ ++D I + + G
Sbjct: 96 WEKEGFFKPEYIDKLNPGSNPADSFTVCIPPPNVTGNLHVGHALATTVEDTITRFNRMHG 155
Query: 262 FDAPYIPGWDCHGLPIEIAIEKKYGKV-GVT---LDAVQFRQKCREYAAEQIQLQRRDFK 429
+ PG D G+ ++ +EK+ + G+T L +F Q+ + E+ + F+
Sbjct: 156 KRTLFNPGCDHAGIATQVVVEKRLKRERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFR 215
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEY 609
+LG DWD T+D + A ++ + G + R + V+W SA+++ E++
Sbjct: 216 KLGASVDWDRAVFTMDPKMCRAVTEAFIRMHESGTIYRSNRLVNWSCALRSAISDIEVDK 275
Query: 610 TDKTSPMVDVAYPALDPSALAAVFNATL----PPDVQLAVPIWTTTPWTLPASLAISVGP 777
+ T + +A P D V N+ D ++ V TT T+ ++V P
Sbjct: 276 KELTGSTL-IAVPGYDKKIEFGVLNSFAYKIQGSDEEIVVS--TTRIETMLGDSGVAVHP 332
Query: 778 TLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYP 957
RY K +Q I HPF P
Sbjct: 333 D----------------------------DQRY-----------KHLVGKQCI--HPFIP 351
Query: 958 DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLP 1137
R +P+ + V E GTGAV P H D++V + L H N + G+
Sbjct: 352 TRNLPIFADSFVEMEFGTGAVKITPAHDHNDYEVGIRQNLPFH------NCITDDGLISQ 405
Query: 1138 TTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQW 1317
FS G+ + A +++ + P C R K I PQW
Sbjct: 406 GCGEFS-----GMKRFDARTAVIEALKEKGLYRGKEDNPMVVPTCSRSKDVIEPILKPQW 460
Query: 1318 FISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRH 1497
++ A ++ A A + P++ +A +E+ DW ISRQ WG IP +
Sbjct: 461 YVKCAHMAEKAVAAVANGDLQIIPEFHKATWNRWLESSRDWCISRQLWWGHRIPAYYISF 520
Query: 1498 SGAPHPRSAALMRQVADRVEQQGVDIW---YSLDQTELLGTEADQYEKITDILDVWFDSG 1668
+ V+ R EQ+ + + + + E+L + D+ D+LD WF SG
Sbjct: 521 ADGREQPLPEENYWVSARTEQEALAKAAQKFQVPEAEIL-LKWDE-----DVLDTWFSSG 574
Query: 1669 ITHEAVLLERGLPKPADLYLEGADQHRG------WFQSSLLTGVAMDNAAPYKQCLTHGF 1830
+ AV K DL+ GA G W + + P+K+ L H
Sbjct: 575 MWPFAVFGWPDATKDMDLFFPGAVLETGHDILFFWVARMVFMAQELTGKLPFKEILLHAM 634
Query: 1831 TVDQHGRKMSKSLGNGIEPQDIIKTL---------------------------------- 1908
D HGRKMSKSLGN I+P D+I+ +
Sbjct: 635 IRDAHGRKMSKSLGNVIDPLDVIRGISLNDLQAQLLGGNLDEKEIAVAKEGQARDYPDGI 694
Query: 1909 ---GADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIRN----TARFLLGNLHG---FD 2058
G D LR + S S ++ ++L+ YR+ N RF L +
Sbjct: 695 PECGVDALRFALLSYT-SQGRDINLDVLR--VHGYRKFCNKLWQVVRFALARISDKPEQK 751
Query: 2059 PTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDV 2238
PT + L D WI+ R + + A Y+F + NF D +Y++
Sbjct: 752 PTFE-INLKSATPTDLWILSRLAKAVKETNEALKAYNFTQATTVTYNFWLYDFCDVYVET 810
Query: 2239 TKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
K LY ++ R+ A + ++ +R I+P++ F ++ELW +P
Sbjct: 811 IKPVLY--GDNTTLRQVAISVLHKCIDTGLRLISPLMPFISEELWQRMP 857
>gi|135184|sp|P28350|SYV_NEUCR VALYL-TRNA SYNTHETASE, MITOCHONDRIAL
PRECURSOR (VALINE--TRNA LIGASE) (VALRS)
>gi|101878|pir||A41251 valine--tRNA ligase (EC 6.1.1.9) -
Neurospora crassa
Length = 1093
Score = 180 bits (452), Expect = 5e-44
Identities = 195/775 (25%), Positives = 321/775 (41%), Gaps = 63/775 (8%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E A + WE+ ++ F++ PP G +H GHA+ L+D +I+ +
Sbjct: 146 EAAWYQWWEKAGYFKPESCRKPSAGKFVIPLPPPNVTGALHCGHALANSLQDTLIRWYRM 205
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEK----KYGKVGVTLDAVQFRQKCREYAAEQIQLQRRD 423
G++ ++PG D G+ + +EK K K+ L +F E+ E Q
Sbjct: 206 KGYETLWVPGCDHAGISTQSVVEKMLWKKEKKIRQELGREKFTDLVWEWKGEYHQRINNA 265
Query: 424 FKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
K +G DW T+D A + ++ D+G + R + V+WC +AL+ E+
Sbjct: 266 QKLMGGSMDWSREAFTMDKNLTAATMETFCRLHDEGLIYRSNRLVNWCTHLNTALSGLEV 325
Query: 604 EYTDKTS-PMVDVAYPALDPSALAAV---FNATLPPDVQLAVPIWTTTPWTLPASLAISV 771
E + T ++DV P D V F + + + + TT P T+ I+V
Sbjct: 326 ETKEITGRTLLDV--PGYDKKVEFGVLTHFKYQIDGSEE-TIEVATTRPETMLGDTGIAV 382
Query: 772 GPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPF 951
P E P ++ H K A HPF
Sbjct: 383 NP-------EDPRYT---------------------------HLVGKFAR-------HPF 401
Query: 952 YPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVY 1131
DR +P++ N+V E GTGAV P H D+Q+ Q++ L +N ++ G
Sbjct: 402 V-DRLLPIVTDNYVDKEFGTGAVKLTPAHDFNDYQLGQRHNL------EFINILNENGTL 454
Query: 1132 LPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATP 1311
PF G + A +V+ P C + K I T
Sbjct: 455 NDNAGPFK-----GQKRFDARYTVVEELTKLGLFVKKEPNPMKIPLCEKSKDVIEPMMTE 509
Query: 1312 QWFISMEQAALRSAALKAITH--VTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLF 1485
QW++ M++ + AAL+ + V P+ + + DW ISRQ WG IP +
Sbjct: 510 QWWVRMKE--MGEAALQVVEEGKVKISPESATKSYKRWLADIQDWCISRQLWWGHRIPAY 567
Query: 1486 VHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDS 1665
G R V R +++ + + + G + E+ D LD WF S
Sbjct: 568 RVIFEGEEGQRENEKSEWVVGRTQEEA----QAKAEAKFAGRKFT-LEQDPDCLDTWFSS 622
Query: 1666 GITHEAVLLERGLPK----------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQC 1815
G+ A+L G P P + G D W ++ + M P+ +
Sbjct: 623 GLWPMAIL---GWPNTENLDFKKFFPTSMLETGWDILFFWVSRMIMLSLKMTGEVPFTEV 679
Query: 1816 LTHGFTVDQHGRKMSKSLGNGIEPQDIIKTL----------------------------- 1908
H D GRKMSKSLGN I+P DII+ +
Sbjct: 680 YCHSLIRDSEGRKMSKSLGNVIDPLDIIRGIELEDLHAKLLVGNLKEEEVARATKYQKTA 739
Query: 1909 --------GADILRLWIAS-TDYSNEMSLSQEILKRTTDAYRRIRN----TARFLLGNL- 2046
GAD +R + S T +++ ++ AYRR N ++++LG L
Sbjct: 740 FPGGIPECGADAMRFTLLSYTTGGGDINFDIRVM----HAYRRFCNKIWQASKYVLGKLP 795
Query: 2047 HGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSL 2226
F P L ++ ++WI+HR + + A +F+ + F +L +
Sbjct: 796 QDFMPKGEL-DTANFSVPEKWILHRMNVAVKGMNEALEAREFSRATKVAYQFFYDELCDV 854
Query: 2227 YLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHAD 2400
+++ +K L + ++S Q +YH +R + PI+ + +ELW LP D
Sbjct: 855 FIENSKGILSDGTPEE--QQSVQQTLYHALDVALRLLHPIMPYITEELWQRLPRKQGD 910
>gi|151347 (M35366) transfer RNA-Ile synthetase [Pseudomonas
fluorescens]
Length = 242
Score = 173 bits (435), Expect = 5e-42
Identities = 89/232 (38%), Positives = 123/232 (52%), Gaps = 10/232 (4%)
Frame = +1
Query: 2131 LQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYH 2310
LQ+ ++ Y Y F + I NFC +LG YLD+ KDR YT ++ RRSA A+ H
Sbjct: 1 LQRELQEHYGEYRFWNVYSKIHNFCVQELGGFYLDIIKDRQYTTGANSKARRSADRAVPH 60
Query: 2311 LTAAFVRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLT 2490
VRWIAPIL+FTADELW YLPG+ ++V+ TWY+G ++ ++
Sbjct: 61 -QRRLVRWIAPILAFTADELWEYLPGERNESVMLNTWYEGLTELPADFELGREYWEGVMA 119
Query: 2491 LRDHVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTVTP-- 2664
++ V K LE RA +G L+ ELRF+ I+ ++ P
Sbjct: 120 VKVAVNKELEVQRAAKAVGGNLQAEVTLFAEDGLTADLAKLSNELRFVLITSTASLAPFT 179
Query: 2665 --------ANTDGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRCVTNVDGPGEQR 2820
G + + KCARCWH R D+G +P HPE+CGRCV N+ G GE R
Sbjct: 180 QAPADAVATEVPGLKLKVVKSAFPKCARCWHCREDVGVNPEHPEICGRCVDNISGEGEVR 239
Query: 2821 HW 2826
H+
Sbjct: 240 HY 241
>gi|94846|pir||A37152 isoleucine--tRNA ligase (EC 6.1.1.5) -
Pseudomonas fluorescens (fragments)
Length = 271
Score = 173 bits (435), Expect = 5e-42
Identities = 89/232 (38%), Positives = 123/232 (52%), Gaps = 10/232 (4%)
Frame = +1
Query: 2131 LQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYH 2310
LQ+ ++ Y Y F + I NFC +LG YLD+ KDR YT ++ RRSA A+ H
Sbjct: 30 LQRELQEHYGEYRFWNVYSKIHNFCVQELGGFYLDIIKDRQYTTGANSKARRSADRAVPH 89
Query: 2311 LTAAFVRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXXXXXXXXXDFDKLLT 2490
VRWIAPIL+FTADELW YLPG+ ++V+ TWY+G ++ ++
Sbjct: 90 -QRRLVRWIAPILAFTADELWEYLPGERNESVMLNTWYEGLTELPADFELGREYWEGVMA 148
Query: 2491 LRDHVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDVTVTP-- 2664
++ V K LE RA +G L+ ELRF+ I+ ++ P
Sbjct: 149 VKVAVNKELEVQRAAKAVGGNLQAEVTLFAEDGLTADLAKLSNELRFVLITSTASLAPFT 208
Query: 2665 --------ANTDGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRCVTNVDGPGEQR 2820
G + + KCARCWH R D+G +P HPE+CGRCV N+ G GE R
Sbjct: 209 QAPADAVATEVPGLKLKVVKSAFPKCARCWHCREDVGVNPEHPEICGRCVDNISGEGEVR 268
Query: 2821 HW 2826
H+
Sbjct: 269 HY 270
Score = 39.9 bits (91), Expect = 0.11
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLR 129
DYK T +LP T FPM+ LP+REP + E + Y + R
Sbjct: 3 DYKATXNLPDTAFPMKAGLPQREPQSCLQRELQEHYGEYR 42
>gi|173164 (J02719) valyl-tRNA synthetase [Saccharomyces cerevisiae]
Length = 1104
Score = 170 bits (426), Expect = 6e-41
Identities = 186/758 (24%), Positives = 314/758 (40%), Gaps = 65/758 (8%)
Frame = +1
Query: 112 FYAQLRAHAKGRP--LFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPG 285
F + A K +P +F + PP G +H+GHA+ ++D +I+ + G ++PG
Sbjct: 167 FEPEFTADGKVKPEGVFCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPG 226
Query: 286 WDCHGLPIEIAIEK----KYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDW 453
+D G+ + +EK K K F K E+ E + ++LG DW
Sbjct: 227 FDHAGIATQSVVEKQIWAKDRKTRHDYGREAFVGKVWEWKEEYHSRIKNQIQKLGASYDW 286
Query: 454 DAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMV 633
TL A ++ D+G + R ++ V+W +A++ E+E D S +
Sbjct: 287 SREAFTLSPELTKSVEEAFVRLHDEGVIYRASRLVNWSVKLNTAISNLEVENKDVKSRTL 346
Query: 634 DVAYPALDPSALAAVFNATLPPDV--QLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGP 807
++ P D V + P + + I TT P T+ A++V P D
Sbjct: 347 -LSVPGYDEKVEFGVLTSFAYPVIGSDEKLIIATTRPETIFGDTAVAVHPDDD------- 398
Query: 808 THSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGN 987
RY +HG + HPF P R IP++
Sbjct: 399 ---------------------RYKH----LHGK---------FIQHPFLP-RKIPIITDK 423
Query: 988 H-VSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELT 1164
V E GTGAV P H Q D+ +++ L +N + G+ P +
Sbjct: 424 EAVDMEFGTGAVKITPAHDQNDYNTGKRHNL------EFINILTDDGLLNEECGPEWQ-- 475
Query: 1165 LAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAAL 1344
G+ + A +++ + + P C R I PQW++S + A
Sbjct: 476 --GMKRFDARKKVIEQLKEKNLYVGQEDNEMTIPTCSRSGDIIEPLLKPQWWVSQSEMAK 533
Query: 1345 RSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPR-- 1518
+ + +T P+ +A + N DW ISRQ WG P++ G H R
Sbjct: 534 DAIKVVKDGQITITPKSSEAEYFHWLGNIQDWCISRQLWWGHRCPVYFINIEGEEHDRID 593
Query: 1519 -----SAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSGITHEA 1683
+ M + + + + ++L+Q E D+LD WF SG+ +
Sbjct: 594 GDYWVAGRSMEEAEKKAAAKYPNSKFTLEQDE-------------DVLDTWFSSGLWPFS 640
Query: 1684 VLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTV 1836
L G P+ P + G D W +L G+ + + P+K+ H
Sbjct: 641 TL---GWPEKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTGSVPFKEVFCHSLVR 697
Query: 1837 DQHGRKMSKSLGNGIEPQDIIKTLGADILRL----------WIASTDYSNEMSLSQEILK 1986
D GRKMSKSLGN I+P D+I + D L + + S I +
Sbjct: 698 DAQGRKMSKSLGNVIDPLDVITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQ 757
Query: 1987 RTTDAYR----------------------------RIRNTARFLLGNL-HGFDPTLHLVP 2079
TDA R +I +F L L + P
Sbjct: 758 CGTDAMRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFALMRLGDDYQPPATEGL 817
Query: 2080 LSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYT 2259
+ +++WI+H+ E + + A + DF +I F + + +Y++ +K Y
Sbjct: 818 SGNESLVEKWILHKLTETSKIVNEALDKRDFLTSTSSIYEFWYL-ICDVYIENSK---YL 873
Query: 2260 MRE-DAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
++E A ++SA+ +Y L ++ I P + F ++E+W LP
Sbjct: 874 IQEGSAIEKKSAKDTLYILLDNALKLIHPFMPFISEEMWQRLP 916
>gi|6321531|ref|NP_011608.1|VAS1| mitochondrial and cytoplasmic
valyl-tRNA synthetase; Vas1p
>gi|1711655|sp|P07806|SYV_YEAST VALYL-TRNA SYNTHETASE,
MITOCHONDRIAL PRECURSOR (VALINE--TRNA LIGASE) (VALRS)
>gi|2144552|pir||SYBYVT valine--tRNA ligase (EC 6.1.1.9)
- yeast (Saccharomyces cerevisiae)
>gi|1323141|emb|CAA97097| (Z72879) ORF YGR094w
[Saccharomyces cerevisiae]
Length = 1104
Score = 170 bits (426), Expect = 6e-41
Identities = 186/758 (24%), Positives = 314/758 (40%), Gaps = 65/758 (8%)
Frame = +1
Query: 112 FYAQLRAHAKGRP--LFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPG 285
F + A K +P +F + PP G +H+GHA+ ++D +I+ + G ++PG
Sbjct: 167 FEPEFTADGKVKPEGVFCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPG 226
Query: 286 WDCHGLPIEIAIEK----KYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDW 453
+D G+ + +EK K K F K E+ E + ++LG DW
Sbjct: 227 FDHAGIATQSVVEKQIWAKDRKTRHDYGREAFVGKVWEWKEEYHSRIKNQIQKLGASYDW 286
Query: 454 DAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMV 633
TL A ++ D+G + R ++ V+W +A++ E+E D S +
Sbjct: 287 SREAFTLSPELTKSVEEAFVRLHDEGVIYRASRLVNWSVKLNTAISNLEVENKDVKSRTL 346
Query: 634 DVAYPALDPSALAAVFNATLPPDV--QLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGP 807
++ P D V + P + + I TT P T+ A++V P D
Sbjct: 347 -LSVPGYDEKVEFGVLTSFAYPVIGSDEKLIIATTRPETIFGDTAVAVHPDDD------- 398
Query: 808 THSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGN 987
RY +HG + HPF P R IP++
Sbjct: 399 ---------------------RYKH----LHGK---------FIQHPFLP-RKIPIITDK 423
Query: 988 H-VSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELT 1164
V E GTGAV P H Q D+ +++ L +N + G+ P +
Sbjct: 424 EAVDMEFGTGAVKITPAHDQNDYNTGKRHNL------EFINILTDDGLLNEECGPEWQ-- 475
Query: 1165 LAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAAL 1344
G+ + A +++ + + P C R I PQW++S + A
Sbjct: 476 --GMKRFDARKKVIEQLKEKNLYVGQEDNEMTIPTCSRSGDIIEPLLKPQWWVSQSEMAK 533
Query: 1345 RSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPR-- 1518
+ + +T P+ +A + N DW ISRQ WG P++ G H R
Sbjct: 534 DAIKVVRDGQITITPKSSEAEYFHWLGNIQDWCISRQLWWGHRCPVYFINIEGEEHDRID 593
Query: 1519 -----SAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSGITHEA 1683
+ M + + + + ++L+Q E D+LD WF SG+ +
Sbjct: 594 GDYWVAGRSMEEAEKKAAAKYPNSKFTLEQDE-------------DVLDTWFSSGLWPFS 640
Query: 1684 VLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTV 1836
L G P+ P + G D W +L G+ + + P+K+ H
Sbjct: 641 TL---GWPEKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTGSVPFKEVFCHSLVR 697
Query: 1837 DQHGRKMSKSLGNGIEPQDIIKTLGADILRL----------WIASTDYSNEMSLSQEILK 1986
D GRKMSKSLGN I+P D+I + D L + + S I +
Sbjct: 698 DAQGRKMSKSLGNVIDPLDVITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQ 757
Query: 1987 RTTDAYR----------------------------RIRNTARFLLGNL-HGFDPTLHLVP 2079
TDA R +I +F L L + P
Sbjct: 758 CGTDAMRFALCAYTTGGRDINLDILRVEGYRKFCNKIYQATKFALMRLGDDYQPPATEGL 817
Query: 2080 LSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYT 2259
+ +++WI+H+ E + + A + DF +I F + + +Y++ +K Y
Sbjct: 818 SGNESLVEKWILHKLTETSKIVNEALDKRDFLTSTSSIYEFWYL-ICDVYIENSK---YL 873
Query: 2260 MRE-DAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
++E A ++SA+ +Y L ++ I P + F ++E+W LP
Sbjct: 874 IQEGSAIEKKSAKDTLYILLDNALKLIHPFMPFISEEMWQRLP 916
>gi|88981|pir||S17675 valine--tRNA ligase (EC 6.1.1.9) - human
>gi|31545|emb|CAA41990| (X59303) valyl-tRNA synthetase
[Homo sapiens]
Length = 1265
Score = 169 bits (425), Expect = 7e-41
Identities = 198/763 (25%), Positives = 323/763 (41%), Gaps = 82/763 (10%)
Frame = +1
Query: 97 WERDDFYAQLRAH-----AKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDG 261
WE+ F+ A R +F++ PP G +HLGHA+ ++D + + + G
Sbjct: 313 WEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRG 372
Query: 262 FDAPYIPGWDCHGLPIEIAIEKK-YGKVGVT---LDAVQFRQKCREYAAEQIQLQRRDFK 429
+ PG D G+ ++ +EKK + + G++ L F Q+ ++ E+ K
Sbjct: 373 ETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLK 432
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI-- 603
+LG DWD T+D + A A ++ ++G + R T+ V+W SA+++ E+
Sbjct: 433 KLGSSLDWDRACFTMDPKLSAAVTEAFVRLHEEGIIYRSTRLVNWSCTLNSAISDIEVDK 492
Query: 604 -EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPT 780
E T +T V ++ L + D V + TT T+ +A++V P
Sbjct: 493 KELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAVHPK 552
Query: 781 LDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPD 960
RY H K + HPF
Sbjct: 553 ----------------------------DTRYQ------HLKGKN-------VIHPFL-S 570
Query: 961 RTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARG----- 1125
R++P++ V + GTGA P H Q D++V Q++GL ++ +D+RG
Sbjct: 571 RSLPIVFDEFVDMDFGTGAGKITPAHDQNDYEVGQRHGL------EAISIMDSRGGPHQC 624
Query: 1126 ---------VYLPTTPPFSELTLAGLHIW-KANPLIVDXXXXXXXXXXXXEMHHSYPHCW 1275
V P L GL + NP++V P C
Sbjct: 625 ASAFPGPAQVLRPGKRCLVALKERGLFRGIEDNPMVV-------------------PLCN 665
Query: 1276 RHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQ 1455
R K + PQW++ + A ++A + P+ Q + ++N +W ISRQ
Sbjct: 666 RSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIREWCISRQ 725
Query: 1456 RTWGVPIPLFVHRHSGA-------PHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTE 1614
WG IP + S P R R A+ E+ + S D+ L E
Sbjct: 726 LWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRNEAEAREKAAKEFGVSPDKISLQQDE 785
Query: 1615 ADQYEKITDILDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSS 1767
D+LD WF SG+ ++L G P P L G D W
Sbjct: 786 --------DVLDTWFFSGLFPLSIL---GWPNQSEDLSVFYPGTLLETGHDILFFWVARM 834
Query: 1768 LLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTD 1947
++ G+ + P+++ H D HGRKMSKSLGN I+P D+I + L + +++
Sbjct: 835 VMLGLKLTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHNQLLNSN 894
Query: 1948 YS-NEMSLSQEILKRT---------TDAYR----------------------------RI 2013
+E+ ++E K TDA R ++
Sbjct: 895 LDPSEVEKAKEGQKADFPAGIPECGTDALRFGLCAYMSQGRDINLDVNRILGYRHFCNKL 954
Query: 2014 RNTARFLLGNL-HGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQT 2190
N +F L L GF P+ P +DRWI R E + + YDF +
Sbjct: 955 WNATKFALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTA 1014
Query: 2191 ILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADEL 2370
+F +L +YL+ K L + D A+ +Y +R ++P + F +EL
Sbjct: 1015 QYSFWLYELCDVYLECLKPVLNGV--DQVAAECARQTLYTCLDVGLRLLSPFMPFVTEEL 1072
Query: 2371 WSYLP 2385
+ LP
Sbjct: 1073 FQRLP 1077
>gi|1351179|sp|P49696|SYV_FUGRU VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|1041396|emb|CAA62967| (X91856)
valyl-tRNA synthetase [Fugu rubripes]
Length = 1217
Score = 169 bits (424), Expect = 1e-40
Identities = 195/763 (25%), Positives = 310/763 (40%), Gaps = 73/763 (9%)
Frame = +1
Query: 97 WERDDFYA-----QLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDG 261
WE+ F+ + R +F++ PP G +HLGHA+ ++D + + + G
Sbjct: 262 WEKQGFFKPEFGRKSIGEQNPRGIFMMCIPPPNVTGSLHLGHALTNAIQDTLTRWHRMRG 321
Query: 262 FDAPYIPGWDCHGLPIEIAIEKKYGKVGVT----LDAVQFRQKCREYAAEQIQLQRRDFK 429
+ PG D G+ ++ +EKK + T L +F ++ ++ E+ K
Sbjct: 322 ETTLWNPGCDHAGIATQVVVEKKLMREKGTSRHDLGREKFIEEVWKWKNEKGDRIYHQLK 381
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI-- 603
+LG DWD T+D + A ++ D+G + R + V+W SA+++ E+
Sbjct: 382 KLGSSLDWDRACFTMDPKLSYAVQEAFIRMHDEGVIYRSKRLVNWSCSLNSAISDIEVDK 441
Query: 604 -EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPT 780
E + +T V ++ L + D ++ V TT T+ A++V P+
Sbjct: 442 NELSGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVVVA--TTRIETMLGDTAVAVHPS 499
Query: 781 LD-YVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYP 957
Y ++G T + HPF
Sbjct: 500 DSRYQHLKGKT------------------------------------------VLHPFC- 516
Query: 958 DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLP 1137
DR IP++ + V GTGAV P H D++V ++ L A +N +D G +
Sbjct: 517 DRKIPVVFDDFVDMSFGTGAVKITPAHDHNDYEVGVRHNL------AFINILDENGFVIN 570
Query: 1138 TTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQW 1317
PPF G+ + A ++ + P C R K + PQW
Sbjct: 571 VPPPF-----LGMKRFDARKAVLQALKDRDQFKEIKDNPMVVPVCSRSKDIVEPLMKPQW 625
Query: 1318 FISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLF---V 1488
++S ++A + P + ++N DW ISRQ WG IP + V
Sbjct: 626 YVSCSDMGKQAADAVREGRLKIIPDHHSQTWFNWMDNIRDWCISRQLWWGHRIPAYFITV 685
Query: 1489 HRHSGAP------HPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILD 1650
S P H R + R + E+ S D+ L E D+LD
Sbjct: 686 SDPSVKPGEDMDGHYRVSG--RTPEEAREKAAKRFNVSPDKIALRQDE--------DVLD 735
Query: 1651 VWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAP 1803
WF SGI ++L G P P L G D W ++ G+ + P
Sbjct: 736 TWFSSGINPFSIL---GWPNETEDLNVFYPGTLLETGHDILFFWVARMVMMGLKLTGKLP 792
Query: 1804 YKQCLTHGFTVDQHGRKMSKSLGNGIEPQD------------------------------ 1893
+K+ D HGRKMSKSLGN I+P D
Sbjct: 793 FKEVYHCAVVRDAHGRKMSKSLGNVIDPLDDHIGIALEGLHAQLMDTNLDPLEVEKPKKV 852
Query: 1894 -------IIKTLGADILRLWI-ASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNL- 2046
I G D LR + A T +++L + ++ N +F + L
Sbjct: 853 QKADYPNCIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNAVKFAMRTLG 912
Query: 2047 HGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSL 2226
F P + DRWI+ R AA+ YDF I I NF +L +
Sbjct: 913 DQFVPADTSPAEREESVSDRWILSRLSTAVAQCDAAFRTYDFPAITTAIYNFWLYELCDV 972
Query: 2227 YLDVTKDRLYTMREDAPGRRSA---QTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
YL+ K +ED R A + +Y +R +AP++ F +EL+ LP
Sbjct: 973 YLESVKPVFIKAKEDGSCERPAAVCRQTLYTCLEVGLRLLAPLMPFVTEELYQRLP 1028
>gi|1255429 (U53155) strong similarity to the carboxyl two-thirds of
valyl-tRNA synthetases [Caenorhabditis elegans]
Length = 933
Score = 160 bits (401), Expect = 5e-38
Identities = 181/747 (24%), Positives = 312/747 (41%), Gaps = 74/747 (9%)
Frame = +1
Query: 172 PPYANGQIHLGHAVNKILKDIIIKSKHLDG---------------FDAPYIPGWDCHGLP 306
PP G++HLGHA+ ++D I + + G F A +IPG+D G+
Sbjct: 5 PPNVTGKLHLGHALTVAVEDAICRHQRNQGNKVKFHEKLRCLFLCFQAEWIPGFDHAGIA 64
Query: 307 IEIAIEK---KYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLD 477
++ +EK K GK + + +F ++C + + R+ R+G DW Y TLD
Sbjct: 65 TQVVVEKILAKNGKRRLEMTREEFVKECHLWGEKCSSEIRQQLTRMGASLDWTQSYYTLD 124
Query: 478 FRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALD 657
+F +A + + + RG + VHWC S L+ E+ D S Y L
Sbjct: 125 SKFSEAVTKAFCILEQEDLITRGKRLVHWCPTLSSTLSSQEVNRIDVPSD----GYINLS 180
Query: 658 PSALAA---------VFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPT 810
S+ V L + + TT P TL A +A++V P D
Sbjct: 181 SSSGTRRRVKFGQMHVIRYNLVDSESEFIEVGTTRPETLFADVAVAVHPEDD-------- 232
Query: 811 HSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNH 990
RY HG +H+ + P P R + ++ +
Sbjct: 233 --------------------RYS----KFHG--------KHVWS-PVTPGRKLFVITDSA 259
Query: 991 VSAEDGTGAVHTAPGHGQEDHQVFQQYGL-LNHYSAAELNPVDARGVYLPTTPPFSELTL 1167
VS E GTGAV P H D++++ ++ L + E +DA G + F
Sbjct: 260 VSVEKGTGAVKITPSHDALDYEIWNRWILNAGQNTIEEFACIDAEGKMTNSGEDFD---- 315
Query: 1168 AGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPH-CWRHKTPIVFRATPQWFISMEQAAL 1344
G+ ++A ++ + + + C R I R T QWF+ +
Sbjct: 316 -GMDRFEAREKVIQKLSELGNYNGLMKHEGAQVNICSRTGDIIEPRLTEQWFLDCKDMFA 374
Query: 1345 RSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSA 1524
RSA + +P++ R+ EN+ W +SRQ WG IP +
Sbjct: 375 RSADAIKSGKIEVFPEYQSHRLADWFENQEPWCLSRQLWWGHRIPAY------------- 421
Query: 1525 ALMRQVADRVEQQGVDIWY-SLDQTELLGTEADQYEKITDILDVWFDSGITHEAVLLERG 1701
G W + D+ E D+ ++ D+LD WF S + L++ G
Sbjct: 422 ----------NVPGQSKWMVTTDEEEARRELGDKMQQDPDVLDTWFSSALVP---LVKNG 468
Query: 1702 LPKPADLYLEGAD-QHRGWFQSSLLTG--VAMD-----NAAPYKQCLTHGFTVDQHGRKM 1857
+ A + + GW S +A++ P+ + + HG D GRKM
Sbjct: 469 WLEGAPIQTPSLNVMETGWDISGFWVARMIALNMKLSSGETPFGKVVLHGLVRDNEGRKM 528
Query: 1858 SKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEM--SLSQEILKRTTDAYRRIRNTA-R 2028
SKSLGN I+P D++ + + + + S+ + E + +++ KR + R A R
Sbjct: 529 SKSLGNVIDPLDVLDGITFEKMIERVKSSAHEKEEIDNAVKDLTKRFPNGISRCGPDALR 588
Query: 2029 FLL-------------------GNLHGFDPTLHLVPLSDMIA--------------LDRW 2109
F L LH + +L D +A +D W
Sbjct: 589 FALLKYDVLSTDIPIDVSNAAIEGLHFCNKIWNLAAYYDQLAEKCEVIKDVDSDRLVDEW 648
Query: 2110 IVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRS 2289
I+ R T+ A ++ + T+ F + D+ +YL+ TK L+ D R
Sbjct: 649 IMARLSTTVSTVDAHMNKFSLHLALSTLHKFITSDICDIYLESTKKALW--NNDIARIRE 706
Query: 2290 AQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHADNVLF 2412
A++ + + + + + F ++ ++ + ++LF
Sbjct: 707 ARSILQRVLQPTLVQLNAFMPFVSEYIYERIFKRETGSILF 747
>gi|3738140|emb|CAA21241.1| (AL031852) valyl-trna synthetase,
mitochondrial precursor [Schizosaccharomyces pombe]
>gi|3738176|emb|CAA21312| (AL031856) valyl-trna
synthetase, mitochondrial precursor [Schizosaccharomyces
pombe]
Length = 980
Score = 160 bits (400), Expect = 6e-38
Identities = 183/778 (23%), Positives = 317/778 (40%), Gaps = 63/778 (8%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRP----LFLLHDGPPYANGQIHLGHAVNKILKDIIIK 243
E A + W + F+ + G+P +F++ PP G +H+GHA+ ++D + +
Sbjct: 103 ESAWYDWWVKSGFF-EPEFGPDGKPKKEGVFVITSPPPNVTGALHIGHALTIAIQDSLAR 161
Query: 244 SKHLDGFDAPYIPGWDCHGLPIEIAIEKKYG----KVGVTLDAVQFRQKCREYAAEQIQL 411
+ G ++ G+D GL + +EKK K +F E+ E
Sbjct: 162 WNRMLGKTVLFLGGFDHAGLSTQSVVEKKLWYTQKKTRHDYPRDKFVDIVWEWKEEYHNR 221
Query: 412 QRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALA 591
+ RLG DW T+D + ++ ++ + R + V+WC + L+
Sbjct: 222 IKNQMSRLGGSFDWTREAFTMDENLSRAVVETFVRLHEENIIYRANRLVNWCTALQTTLS 281
Query: 592 EAEIEYTD---KTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLA 762
E+E D +T V ++ L ++ A D ++ + TT P TL A
Sbjct: 282 NLEVENVDVPGRTLLKVPGYDEPVEVGVLTSIAYAVEGSDERIVIA--TTRPETLLGDTA 339
Query: 763 ISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILA 942
++V P + P + +HG +
Sbjct: 340 VAVHP-------QDPRYKH-------------------------LHGK---------FVK 358
Query: 943 HPFYPDRTIPLLLGNH-VSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDA 1119
HPF +R+IP++ + V E GTGAV P H D++V +++ L +N
Sbjct: 359 HPFC-NRSIPIICDDIIVDMEFGTGAVKITPAHDPNDYEVGKRHNL------EFINIFTD 411
Query: 1120 RGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVF 1299
G+ F AG+ + A +V+ E P C + I
Sbjct: 412 DGLLNENCGEF-----AGMKRFTARVKVVERLKELGLFVGTKENPMVIPLCGKTSDIIEP 466
Query: 1300 RATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIP 1479
PQW+++ ++ A +A + + P + + +EN DW ISRQ WG IP
Sbjct: 467 VMKPQWWVNQKEMAAAAAEVVKSGEIEIAPDMSRREFIRWMENIQDWCISRQLWWGHRIP 526
Query: 1480 LFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWF 1659
+ + P + V R +Q + + + E D+ D+LD WF
Sbjct: 527 AYFVNLADEPSQDRSEGRYWVTGRTLEQAEEKAKAAFPGKSFTLEQDE-----DVLDTWF 581
Query: 1660 DSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQ 1812
SG+ + L G PK P L G D W ++ G+ + P+K+
Sbjct: 582 SSGLWPFSTL---GWPKDTSDYENFYPTTLMETGWDILFFWIARMVMLGLKLTGKIPFKR 638
Query: 1813 CLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADIL--RLWIASTD--------YSNEM 1962
H D GRKMSKSLGN ++P D+I+ + L +L + + D +
Sbjct: 639 VFCHALVRDAQGRKMSKSLGNVVDPIDVIEGISLQALHDKLLVGNLDSREVEKAKKGQRL 698
Query: 1963 SLSQEILKRTTDAYR----------------------------RIRNTARFLLGNL-HGF 2055
S + I + TDA R ++ N +F LG L F
Sbjct: 699 SYPKGIPQCGTDALRFTLCSLTTGGRDLNLDILRVEGYRKFCNKLYNATKFALGRLGSNF 758
Query: 2056 DPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLD 2235
P + +++WI HR + +F + + F +L +Y++
Sbjct: 759 VPNKTADLTGNESLVEKWIFHRLNIAAAAMNKNMEEMNFLQATSAVHQFWLYELCDVYIE 818
Query: 2236 VTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYL---PGDHADNV 2406
+K L E + SA+ +Y + +R + P + + +E+W L PGD +
Sbjct: 819 NSKYLLSDGTE--VQQESAKQTLYTVLDNALRLMHPFMPYVTEEMWQRLPRRPGDKTQTI 876
Query: 2407 L 2409
+
Sbjct: 877 V 877
>gi|1518681 (U60901) isoleucyl-tRNA-synthetase [Bacillus subtilis]
Length = 121
Score = 155 bits (389), Expect = 1e-36
Identities = 65/106 (61%), Positives = 83/106 (77%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
D+K TL +P TDFPMRG+LP REP I ++WE +D Y ++ K RP F+LHDGPPYANG
Sbjct: 2 DFKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANG 61
Query: 190 QIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK 327
IH+GHA+NKILKD I++ K + G++APY+PGWD HGLPIE A+ K
Sbjct: 62 DIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTK 107
>gi|5105495|dbj|BAA80808.1| (AP000062) 889aa long hypothetical
valyl-tRNA synthetase [Aeropyrum pernix]
Length = 889
Score = 153 bits (382), Expect = 8e-36
Identities = 192/771 (24%), Positives = 309/771 (39%), Gaps = 33/771 (4%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E +L W+ +D + R + ++ PPY +G+ H+G A + D+I + L
Sbjct: 85 EEKLLSLWDAEDLHKSTLDPDDPREIVVIDTPPPYPSGKWHVGGAAHYTQIDMIARYFRL 144
Query: 256 DGFD--APYIPGWDCHGLPIEIAIEKKYGKVG-----VTLDAVQFRQKCREYA----AEQ 402
G++ AP+ D +GLP+E+ +EK YG V T +F C E+ +E
Sbjct: 145 KGYNVVAPFYA--DRNGLPVEVQVEKTYGVVAHEMARTTEGRERFLALCSEFLDKVESEI 202
Query: 403 IQLQRR-----DFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWC 567
+QL RR D+ R G D+P R+ + + +G + +PV WC
Sbjct: 203 VQLWRRLGCGFDYWREGT----DSP------RYRSMTQATFIDLWRRGLIYEAERPVRWC 252
Query: 568 FDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTL 747
C + LAEAEIE+ + + V Y + D+ +A TT P L
Sbjct: 253 PRCKTTLAEAEIEHKEDEDFIYYVKYRLEEDGR-----------DLVVA----TTRPELL 297
Query: 748 PASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAME 927
A++ P E + G + IA L H
Sbjct: 298 AGCAALAYHP-------EDERYKG--------------LAGKTAIAPLYGH--------R 328
Query: 928 QHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELN 1107
I+ HP V + GTG + +ED ++F + +L
Sbjct: 329 VKIVEHPA-------------VKKDFGTGLMMICSYGDEEDVRLFLEL---------DLK 366
Query: 1108 P---VDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWR 1278
P +D GV P +AGL + +A I + + HS P CWR
Sbjct: 367 PKVLIDENGVMNENAGP-----IAGLPVKEARRRIAEILEREGLLVKKERIVHSVPVCWR 421
Query: 1279 HKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIEN-RPDWTISRQ 1455
KTP+ + F+ Q + A +A + + P+ + ++ I++ + DW ISR+
Sbjct: 422 CKTPLQIIHRRELFL--RQLDFKDAVKQAAAKMDFKPEMHRKKLYDWIDSIKMDWPISRE 479
Query: 1456 RTWGVPIPLFVHRHSGAPH-PRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEK 1632
R +G IPL+ GA P R A+ W D G +
Sbjct: 480 RFYGTEIPLWTCEKCGAKLVPEPGRYYRPWAEEPP------W---DSCPRCGAPRRYLKG 530
Query: 1633 ITDILDVWFDSGITHEAV---LLERGLPKPAD---LYLEGADQHRGWFQSSLLTGVAMDN 1794
T + D WFDS I+ V + ++ + A L +G D R W S+L + +
Sbjct: 531 ETRVFDTWFDSSISPLYVTRWMWDKRFYERASRNVLRPQGQDIIRTWLYYSILRVLQLTG 590
Query: 1795 AAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIA-STDYSNEMSLS 1971
++ G +D GR M KSLGN I+P+ II G D R W A + +
Sbjct: 591 KPAFRWVRITGLGLDPKGRPMHKSLGNVIDPEPIIAKYGGDAFRFWAAIAAKLGYDYRFD 650
Query: 1972 QEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKA 2151
+ +K + ++ N ARF+ P PL +D+ + A E +
Sbjct: 651 ENKVKTGRNFATKLWNLARFV-----SSFPRPEGSPLEKATEVDKAFLALADEYLEAADK 705
Query: 2152 AYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYT-----MREDAPGRRSAQTAMYHLT 2316
AY D E I S Y+++ K+R Y RE+ + +A ++ L
Sbjct: 706 AYGELDVYEPANLIYELAWDIFASHYVELVKERSYNRSGLFTREE---QEAAWATLHELL 762
Query: 2317 AAFVRWIAPILSFTADELWSYLPG 2388
+ ++PI+ F D + L G
Sbjct: 763 RRILVALSPIMPFVTDAIHRRLYG 786
>gi|2501066|sp|P75304|SYV_MYCPN VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|2146697|pir||S73687 valine--tRNA
ligase (EC 6.1.1.9) valS - Mycoplasma pneumoniae (SGC3)
(ATCC 29342) >gi|1674039 (AE000034) Mycoplasma
pneumoniae, valyl-tRNA synthetase; similar to Swiss-Prot
Accession Number P11931, from B. stearothermophilus
[Mycoplasma pneumoniae]
Length = 838
Score = 151 bits (378), Expect = 2e-35
Identities = 161/750 (21%), Positives = 284/750 (37%), Gaps = 9/750 (1%)
Frame = +1
Query: 172 PPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT 351
PP G +H+GHA + D I++ K L G+ +IPG+D G+ + EK +
Sbjct: 45 PPNLTGTLHIGHAFEVSITDQIMRFKRLRGYGVNWIPGFDHAGIATQTKYEKLARETNPE 104
Query: 352 LDAVQFRQKCR---EYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIV 522
+QK + ++A Q + K LG +W+ TL + + ++
Sbjct: 105 YFQAPRKQKVKMIMDWALTQGDTIQSQIKSLGASLNWNQVNFTLSKKASQIVNDSFIQLF 164
Query: 523 DKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPD 702
++G + + V+W +A++ E+ + +AY + P
Sbjct: 165 EQGFIYQAETLVNWDTKLNTAISNIEVINKPVDQQLYYIAYKLANN------------PK 212
Query: 703 VQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGI 882
+L V TT P T+ + + V P + +
Sbjct: 213 KRLVVA--TTRPETIFVDVCLFVHPKDKHY---------------------------HSF 243
Query: 883 AELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVF 1062
+ + GA M P+ ++V + GTG + P H F
Sbjct: 244 VKQKVVNPLTGALM---------------PVFTDSYVDKKFGTGVLKCTPAHD------F 282
Query: 1063 QQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXX 1242
+ L Y ++ +D G+ F+ LT++ A +V+
Sbjct: 283 NDFALNEKYRLPFVSCIDHNGLLNEHAKQFTGLTVSA-----ARQQVVEFLQTQKLLVKT 337
Query: 1243 XEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMI 1422
+ + R T + + QWF+ + + ++ A+K + P+ ++ +
Sbjct: 338 MPLTSNVGFSERSDTVVEPLLSKQWFVDLPKLK-KALAIKKYPELI--PKRFNKQVTRWL 394
Query: 1423 ENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTEL 1602
W ISRQ WG PIP++ H+ SGA H S A
Sbjct: 395 SQLKPWCISRQLIWGHPIPVWTHKQSGALHVGSTA------------------------- 429
Query: 1603 LGTEADQYEKITDILDVWFDSGITHEAVLLERGLPK---PADLYLEGADQHRGWFQSSLL 1773
T+ Y + TD+LD WF S + + L+ K P DL + G D W
Sbjct: 430 -PTDKQNYTQSTDVLDTWFSSSLW-PLICLDWHKNKHFVPTDLLVTGYDILFFWVLRMTF 487
Query: 1774 TGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDY- 1950
P+KQ L HG D RKMSKSL NGI P D+I+ GAD RL++ S
Sbjct: 488 NSYFQTKQLPFKQVLIHGLVRDAQNRKMSKSLNNGINPMDLIRDYGADATRLFLTSNHTP 547
Query: 1951 SNEMSLSQEILKRTTDAYRRIRNTARFL--LGNLHGFDPTLHLVPLSDMIALDRWIVHRA 2124
+++ +++ LK + ++ N +++ LG P+ HL +RWI +
Sbjct: 548 GDDLIFNEQKLKSAANFLNKLWNVTKYVLQLGEQAKTVPSTHL----PSTLSERWIWAKL 603
Query: 2125 FELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAM 2304
+L +Y A Q ++NF D + +++ K +ED T
Sbjct: 604 KQLIVQTTKLLDKYQLALANQALVNFIWNDFCNTFIETIK------QEDTALLPQLYTTA 657
Query: 2305 YHLTAAFVRWIAPILSFTADELWSYLPGDHADNVLFTTW 2421
+ + V ++ + F A+ ++ H+ +V+ +W
Sbjct: 658 KTVLSTAVVMLSTVTPFLAERIYQQF---HSGSVMQASW 693
>gi|6457813|gb|AAF09735.1|AE001877_2 (AE001877) valyl-tRNA synthetase
[Deinococcus radiodurans]
Length = 913
Score = 150 bits (376), Expect = 4e-35
Identities = 180/794 (22%), Positives = 301/794 (37%), Gaps = 43/794 (5%)
Frame = +1
Query: 40 TDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNK 219
T P + D EP RW + F A + G+ F + PP G +HLGHA++
Sbjct: 7 TTLPTQFDPTGIEPKWAARWRSEPFRADATS---GKDPFTIVIPPPNVTGNLHLGHALDN 63
Query: 220 ILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT---LDAVQFRQKCREY 390
L D +I+ K + GF+A Y+PG D G+ ++ +E++ G + L F +K E+
Sbjct: 64 TLIDTLIRYKRMAGFEALYLPGMDHAGISTQVVVERQLKDAGTSRHDLGREAFLEKVWEW 123
Query: 391 AAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCF 570
+ + RLG+ DW T+D K+ G RG + V+W
Sbjct: 124 KGKSGGMILDQLTRLGVSADWTRERFTMDEGLSRAVRTQFVKLYHDGLAYRGERIVNWDP 183
Query: 571 DCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLP 750
+ L+E EI+ + M ++Y L+ SA T ++++A T P T+
Sbjct: 184 ASQTTLSELEIDREVRKGKMYTLSY-KLENSAERGSNGET--GEIRIA----TVRPETIF 236
Query: 751 ASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQ 930
A AI+V H R+ L+ A+ ++
Sbjct: 237 ADQAIAV-------------HPEDERFRH------------------LVGQKARIPLTDR 265
Query: 931 HILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNP 1110
+ P D + + E G GA+ P H D +V +++G L S +L+
Sbjct: 266 WV---PIIADEAVEM--------EFGVGALKITPAHDPTDFEVGERHG-LERPSVIDLDG 313
Query: 1111 VDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTP 1290
R +P GL + A +V + + R K P
Sbjct: 314 NLTRDELVPA-------EFQGLERFAARKAVVKALEESGDLLEQKDHDTAIGLSERTKVP 366
Query: 1291 IVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGV 1470
+ + QWF+ M+ A + + P+ +EN DW ISRQ WG
Sbjct: 367 VEPIISEQWFVKMKPFADQVLEGLDKGEIKLVPERYTKVNRDWLENIRDWNISRQLWWGH 426
Query: 1471 PIPLFVHRHSG--APHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDI 1644
IP + + P P + L R + + D+
Sbjct: 427 QIPAWYDKEGNIYVPDPENPELDCDQDPRYAHLNL-------------------RRDPDV 467
Query: 1645 LDVWFDSGITHEAVLLERGLPK----------PADLYLEGADQHRGWFQSSLLTGVAMDN 1794
D WF S + + L G P P + + G D W + G +
Sbjct: 468 FDTWFSSNLWPFSTL---GWPDTDSEDFRKFYPTQVLVTGYDILFFWVARMQMAGYGLTG 524
Query: 1795 AAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRL--------------- 1929
AP+ + HG +D G+KMSKS GNGI+P ++ G D R
Sbjct: 525 QAPFSTVMLHGLYLDAKGQKMSKSKGNGIDPLELFGQYGVDACRFAFTFLSTGGQDIKHD 584
Query: 1930 ---WIASTDYSNE---------MSLSQEILKRTTDAYRRIRNTARFLLG-NLHGFDPTLH 2070
+ +++N+ M L + ++ + D +R G L D
Sbjct: 585 ARRFEQGRNFANKLWNATRFALMRLGEARIEGSDDLSAYVRAAVTLPDGVLLRSKDVLAQ 644
Query: 2071 LVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDR 2250
L D+ DRWI+ R ++ A +D ++T+ +F + Y++ K
Sbjct: 645 LKERDDLTLADRWIISRLNDVTAEASAQLDAFDIGAAIRTLYSFTWDEFCDWYIEAAKPE 704
Query: 2251 LYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHADNVLFTTW 2421
L A G + + ++ + P + F EL++ L H + +W
Sbjct: 705 L------ASGNLGTMATLKVVLEHVLKLLHPFMPFITSELYAAL--GHRRQIAVHSW 753
>gi|6226197|sp|O84304|SYV_CHLTR VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|3328717|gb|AAC67895.1| (AE001302)
Valyl tRNA Synthetase [Chlamydia trachomatis]
Length = 939
Score = 149 bits (373), Expect = 9e-35
Identities = 178/779 (22%), Positives = 308/779 (38%), Gaps = 51/779 (6%)
Frame = +1
Query: 46 FPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKIL 225
FP D E + WER + + K P + + PP G +H+GHA+ L
Sbjct: 6 FPKAYDPKSSETGVYSFWERSGMFVANASSEK--PAYSIVMPPPNVTGILHMGHALVNTL 63
Query: 226 KDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK----KYGKVGVTLDAVQFRQKCREYA 393
+D +I+ K + GF+ ++PG D G+ + +E+ GK +F + ++
Sbjct: 64 QDTLIRYKRMQGFEVCWVPGTDHAGIATQTVVERHLKASLGKQRTDFSREEFLKHVWDWK 123
Query: 394 AEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFD 573
+ + ++LG DW T+D +A + DKG + RG V+W
Sbjct: 124 EKSQNVILSQLRQLGCSCDWSRQRFTMDPGANRAVKKAFKILFDKGVIYRGYYLVNWDPI 183
Query: 574 CGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPA 753
+ALA+ E+EY ++ + + Y ++ + + TT P TL
Sbjct: 184 LQTALADDEVEYEERDGWLYYIRYQVVNSEEF---------------ITVATTRPETLLG 228
Query: 754 SLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQH 933
AI+V P E L + GA
Sbjct: 229 DTAIAVSP------------------------------------EDLRYSHLIGAK---- 248
Query: 934 ILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQ--VFQQYGLLNHYS-AAEL 1104
+ PF +R IP++ V A GTGAV P H ++D++ + Q ++N + E+
Sbjct: 249 -VVVPFV-NREIPIIGDFSVDASFGTGAVKITPAHDKDDYKTGMNHQLPMINILTPTGEI 306
Query: 1105 NPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHK 1284
N + G++ GL A I+ +R
Sbjct: 307 N--ENGGIF------------TGLSREVARENIITSLEALGLFVKKEAYSSRVGVSYRSG 352
Query: 1285 TPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTW 1464
I + QWF+S++ + +P L+ + N DW ISRQ W
Sbjct: 353 AIIEPYLSKQWFVSVDSFRDSLRGFVNSEEIRIFPPEFVRNYLTWVNNLKDWCISRQLWW 412
Query: 1465 GVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDI 1644
G IP++ ++H + V + E + + + + + D+
Sbjct: 413 GHRIPVWHNKH--------------------DENVICFDGEGGPEEVMRDPESWYQDPDV 452
Query: 1645 LDVWFDSGI-------THEAVLLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAP 1803
LD WF SG+ + L+ P + + G D W +L AM + P
Sbjct: 453 LDTWFSSGLWPLTCFGWPDENSLDLKKFYPTAVLVTGHDILFFWVTRMVLMCSAMVDTEP 512
Query: 1804 YKQCLTHGF-------TVDQHG---------------------------RKMSKSLGNGI 1881
+ HG D+ G K+SKS GN I
Sbjct: 513 FSDVFLHGLIFGKSYREYDEKGEWFYVSGERKRDYDKGKALPKNVVAKWEKLSKSKGNVI 572
Query: 1882 EPQDIIKTLGADILRLWIAS-TDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGF- 2055
+P ++I+ GAD +RL + S + ++ L + + + ++ N ARF+ G++
Sbjct: 573 DPIEMIEAYGADAVRLTLCSCANRGEQIDLDYHLFEEYKNFINKLWNGARFIFGHISELT 632
Query: 2056 DPTLHLVPLSDMIAL-DRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYL 2232
L D++ L D +I+ R EL I Y Y F +I +F DL S YL
Sbjct: 633 SRDLEEGVNQDLLGLEDFYILDRFNELLDLIDGHYNCYSFDKIASLAYDFFKNDLCSTYL 692
Query: 2233 DVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYL 2382
++ K L+ ++ R + + + L + + PI+ + + L+ L
Sbjct: 693 EIIKPTLFGKQDSDQQRATKRKLLATLLINILGVLHPIVPYITETLFQKL 742
>gi|6226196|sp|Q9Z987|SYV_CHLPN VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|4376354|gb|AAD18247| (AE001595) Valyl
tRNA Synthetase [Chlamydia pneumoniae]
Length = 940
Score = 148 bits (371), Expect = 2e-34
Identities = 175/777 (22%), Positives = 308/777 (39%), Gaps = 52/777 (6%)
Frame = +1
Query: 43 DFPMRGDLPKREPAILERWERDDFYAQLRAHAKG-RPLFLLHDGPPYANGQIHLGHAVNK 219
DFP + EP + WE++ + +A A +P + + PP G +H+GHA+
Sbjct: 5 DFPKAYNFQDTEPELYVFWEKNGMF---KAEASSDKPPYSVIMPPPNVTGVLHMGHALVN 61
Query: 220 ILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK----KYGKVGVTLDAVQFRQKCRE 387
L+D++++ K + GF+ +IPG D G+ + +E+ GK F +
Sbjct: 62 TLQDVLVRYKRMSGFEVCWIPGTDHAGIATQAVVERHLQASEGKRRTDYSREDFLKHIWA 121
Query: 388 YAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWC 567
+ + ++ ++LG DWD T++ +A + + G++ RG V+W
Sbjct: 122 WKEKSEKVVLSQLRQLGCSCDWDRKRFTMEPLANRAVKKAFKTLFENGYIYRGYYLVNWD 181
Query: 568 FDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTL 747
+ALA+ E+EY +K + + Y + Q ++ + TT P T
Sbjct: 182 PVLQTALADDEVEYEEKDGWLYYIRYRMVGS---------------QESIVVATTRPETS 226
Query: 748 PASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAME 927
I+V P RY S GA++E
Sbjct: 227 LGDTGIAVSPN----------------------------DERY--------ASWIGASVE 250
Query: 928 QHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELN 1107
PF +R IP++ V GTGAV P H ++D Y + ++ +N
Sbjct: 251 V-----PFV-NRQIPIIGDASVDPTFGTGAVKVTPAHDKDD------YLMGTNHHLPMIN 298
Query: 1108 PVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKT 1287
+ G PF AG+ KA I+ +R
Sbjct: 299 ILTPSGGINENGGPF-----AGMAKEKAREEILIALEEQGLFVRKEPYKLRVGVSYRSGA 353
Query: 1288 PIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWG 1467
I + QWF+S+ + + +P+ LS + + DW ISRQ WG
Sbjct: 354 VIEPYLSKQWFVSVSEFRGALREFVESQDIKIFPKDFVKNYLSWVNHLRDWCISRQLWWG 413
Query: 1468 VPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDIL 1647
IP++ H++ + + V + E + + D + + D+L
Sbjct: 414 HRIPVWYHKN-------------------DDERVLCYDGEGIPEEVAQDPDSWYQDPDVL 454
Query: 1648 DVWFDSGITHEAVLLERGLPK----------PADLYLEGADQHRGWFQSSLLTGVAMDNA 1797
D WF SG+ L G P P L + G D W +L +M
Sbjct: 455 DTWFSSGLWPLTCL---GWPDENSPDLKKFYPTALLVTGHDILFFWVTRMVLLCSSMSGE 511
Query: 1798 APYKQCLTHGFT----------------------------------VDQHGRKMSKSLGN 1875
P+ + HG V K+SKS GN
Sbjct: 512 KPFSEVFLHGLIFGKSYKRYNDFGEWSYISGKEKLAYDMGEALPDGVVAKWEKLSKSKGN 571
Query: 1876 GIEPQDIIKTLGADILRLWIAS-TDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHG 2052
I+P ++I T G D +RL + S + ++ L + + ++ N ARF+ G++
Sbjct: 572 VIDPLEMIATYGTDAVRLTLCSCANRGEQIDLDYRLFEEYKHFANKVWNGARFIFGHISD 631
Query: 2053 FDPTLHLVPL-SDMIALDRWIVHRAF-ELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSL 2226
L + D + L+ + + F +L ++ AY Y F ++ F DL S
Sbjct: 632 LQGKDLLAGIDEDSLGLEDFYILDGFNQLIHQLEEAYATYAFDKVATLAYEFFRNDLCST 691
Query: 2227 YLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELW 2373
Y+++ K L+ + + + + +T + L + + P+ F + L+
Sbjct: 692 YIEIIKPTLFGKQGNEASQSTKRTLLAVLLINVLGVLHPVAPFITESLF 740
>gi|4155674 (AE001535) VALYL-TRNA SYNTHETASE [Helicobacter pylori J99]
Length = 872
Score = 148 bits (369), Expect = 3e-34
Identities = 173/697 (24%), Positives = 274/697 (38%), Gaps = 20/697 (2%)
Frame = +1
Query: 154 FLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKY 333
F L PP G +H+GHA+ L+DI+++ K +DG+ Y PG D G+ + +EK+
Sbjct: 42 FCLMMPPPNVTGILHIGHALTLSLQDILVRYKRMDGYKTLYQPGLDHAGIATQNVVEKQL 101
Query: 334 GKVGVT---LDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIR 504
GV L +F QK E+ + KRLG+ + T+D +
Sbjct: 102 LSQGVKKEDLGREKFIQKVWEWKEKSGGAILEQMKRLGVSTAFSRTRFTMDKGLQRAVKL 161
Query: 505 ALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFN 684
A K +KG +++ V+WC G AL++ E+EY ++ + + Y + V
Sbjct: 162 AFLKWYEKGLIVQDNYMVNWCTKDG-ALSDIEVEYEERKGALYYIRYYLENQKDYLVVA- 219
Query: 685 ATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXX 864
TT P TL AI V P +
Sbjct: 220 --------------TTRPETLFGDSAIMVNPNDE-------------------------- 239
Query: 865 XXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQ 1044
RY K +Q IL +RTIP++ HV GTG V PGH
Sbjct: 240 --RY-----------KHLVGQQVILP---LINRTIPIIADAHVEMGFGTGCVKVTPGHDF 283
Query: 1045 EDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXX 1224
D++V G +H ++ D +G+ F L +A +V
Sbjct: 284 NDYEV----GKRHHLETIKI--FDEKGILNAHCGEFENLERL-----EARDKVVAALKEN 332
Query: 1225 XXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITH--VTWYP-QW 1395
E H HC+R + + QWF+ E + ++++ I +YP W
Sbjct: 333 ALLEKIEEHVHQVGHCYRCHNVVEPYVSKQWFVKPE---IAQSSIEKIQQGLARFYPSNW 389
Query: 1396 GQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDI 1575
M E RP W ISRQ WG IP+F ++
Sbjct: 390 INNYNAWMRELRP-WCISRQLFWGHQIPVFTCENNHQ----------------------- 425
Query: 1576 WYSLDQTELLGT-EADQYEKITDILDVWFDSGITHEAVL----LERGLPKPADL------ 1722
+ SLD T ++++ E+ D+LD WF SG+ + L + L +DL
Sbjct: 426 FVSLDTPLSCPTCKSEKLEQDKDVLDTWFSSGLWAFSTLGWGQEKSDLFNESDLKDFYPN 485
Query: 1723 --YLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDI 1896
+ G D W L ++ P+K H D+ G KMSKS GN I+P ++
Sbjct: 486 TTLITGFDILFFWVARMLFCSESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEM 545
Query: 1897 IKTLGADILRLWIAS-TDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHL 2073
I+ GAD LR +A+ ++ LS L+ + ++ N A +L F L
Sbjct: 546 IEKYGADSLRFTLANLCATGRDIKLSTTHLENNKNFANKLFNAASYLKLKQESFKDKERL 605
Query: 2074 VPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTK 2244
AL R+ R + + ++ A Y F + + F + +++ +K
Sbjct: 606 NEY--QTALGRYAKSRLNLVTKEVRNALDNYRFNDATTLLYRFLWGEFCDWFIEFSK 660
>gi|1174549|sp|P43834|SYV_HAEIN VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|1075441|pir||G64121 valine--tRNA
ligase (EC 6.1.1.9) - Haemophilus influenzae (strain Rd
KW20) >gi|1574225 (U32819) valyl-tRNA synthetase (valS)
[Haemophilus influenzae Rd]
Length = 954
Score = 147 bits (368), Expect = 4e-34
Identities = 185/771 (23%), Positives = 313/771 (39%), Gaps = 65/771 (8%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E A+ +RWE ++ + + P + + PP G +H+GHA + L D +I+ +
Sbjct: 17 EQALYQRWEESGYFKP--SENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRM 74
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKY----GKVGVTLDAVQFRQKCREYAAEQIQLQRRD 423
+G + + G D G+ ++ +E+K GK F K ++ A +
Sbjct: 75 EGHNTLWQTGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQ 134
Query: 424 FKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
+RLG DW+ T+D ++ ++G + RG + V+W +A+++ E+
Sbjct: 135 MRRLGNSIDWERERFTMDDGLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEV 194
Query: 604 EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTL 783
E + + YP + + A D + + + TT P T+ A++V
Sbjct: 195 ENKESKGSLWHFRYPLANDAKTA---------DGKDYLVVATTRPETMLGDTAVAV---- 241
Query: 784 DYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDR 963
H R+ I + ++ A +R
Sbjct: 242 ---------HPEDERYQSL-------------IGKTVVLPLA----------------NR 263
Query: 964 TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL---------LNHYSAAELNPVD 1116
IP++ +V E GTG V P H D++V +++ L N AE+ D
Sbjct: 264 EIPIIADEYVDREFGTGVVKITPAHDFNDYEVGKRHNLPMVNVLTLNANIRDEAEIIGTD 323
Query: 1117 ARGV--YLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTP 1290
+ + Y T P GL + A IV P+ R P
Sbjct: 324 GKPLAGYEATIPA----DYRGLERFAARKKIVADFEALGLLDEIKPHDLKVPYGDRGGVP 379
Query: 1291 IVFRATPQWFISMEQAALRSAALKAIT--HVTWYPQWGQARILSMIENRPDWTISRQRTW 1464
I T QW++S++ A A+KA+ + + P+ + S + + DW ISRQ W
Sbjct: 380 IEPMLTDQWYVSVKPLA--DVAIKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWW 437
Query: 1465 GVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDI 1644
G IP + R+ +R Y+LD A + ++ D+
Sbjct: 438 GHRIPAWYDAEGNVYVARNEEEVRSK------------YNLDS-------AVELKQDEDV 478
Query: 1645 LDVWFDSGITHEAVL------LERGLPKPADLYLEGADQHRGWFQSSLLTG---VAMDNA 1797
LD WF SG+ + L E + P D+ + G D W ++ V +N
Sbjct: 479 LDTWFSSGLWTFSTLGWPEQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENG 538
Query: 1798 ---APYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSL 1968
P+K G D+ G+KMSKS GN ++P D+I G + L T + L
Sbjct: 539 KPQVPFKTVYVTGLIRDEQGQKMSKSKGNVLDPIDMID--GISLEDLLEKRTGNMMQPQL 596
Query: 1969 SQEILKRT------------TDAYR------------------RIRNTARFL--LGNLHG 2052
+++I K T TDA R R+ F L N
Sbjct: 597 AEKIAKATRKEFAEGIAAHGTDALRFTLAALASNGRDINWDMKRLEGYRNFCNKLWNASR 656
Query: 2053 FDPTLHLVPLS----DMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLG 2220
F T + LS + DRWI +T +++ ++Y F I F
Sbjct: 657 FVLTNEKLDLSQGEIEFSLADRWIQSEFNRTVETFRSSLSQYRFDLCANAIYEFTWNQFC 716
Query: 2221 SLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPG 2388
YL++TK +A R+A + H+ +R P++ F +E+W + G
Sbjct: 717 DWYLELTKP--VFANGNAAQIRAASQTLVHVLEKLLRLAHPLIPFITEEIWQKVKG 770
>gi|3122914|sp|P93736|SYV_ARATH VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|1890130|gb|AAB49704.1| (U89986) valyl
tRNA synthetase [Arabidopsis thaliana]
Length = 1107
Score = 143 bits (357), Expect = 7e-33
Identities = 194/769 (25%), Positives = 323/769 (41%), Gaps = 78/769 (10%)
Frame = +1
Query: 79 PAILER-----WERDDFYAQLRAHAKG-RPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
PA +E+ WE+ D + +A AK +P F++ PP G +H+GHA+ ++D II
Sbjct: 142 PATVEKSWYAWWEKSDLF---KADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTII 198
Query: 241 KSKHLDGFDAPYIPGWDCHGLPIEIAIEKKY----GKVGVTLDAVQFRQKCREYAAEQIQ 408
+ K + G++A ++PG D G+ ++ +EKK G + +F ++ ++ +
Sbjct: 199 RWKRMSGYNALWVPGVDHAGIATQVVVEKKIMRDRGMTRHDVGREEFVKEVWKWKNQYGG 258
Query: 409 LQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSAL 588
+RLG DW T+D + A ++ +G + R + V+W +A+
Sbjct: 259 TILTQLRRLGASLDWSRECFTMDEQRSKAVTEAFVRLYKEGLIYRDIRLVNWDCILRTAI 318
Query: 589 AEAEIEYTD-KTSPMVDVAYPALD-PSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLA 762
++ E+EY D K ++ V P + P + + P + V + TT T+ A
Sbjct: 319 SDVEVEYIDIKEKTLLKV--PGYEKPVEFGLLTSFAYPLEELGRVIVATTRVETMLGDTA 376
Query: 763 ISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILA 942
I++ P RY +HG
Sbjct: 377 IAIHP----------------------------DDARY----KHLHGK---------FAV 395
Query: 943 HPFYPDRTIPLLL-GNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDA 1119
HPF R +P++ G V GTG V P H D +V +++ L + ++
Sbjct: 396 HPF-NGRKLPIICDGILVDPNFGTGCVKITPAHDPNDCEVGKRHKLEFINIFTDDGKINT 454
Query: 1120 RGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVF 1299
G AG+ + A +V+ C R I
Sbjct: 455 NG----------GSDFAGMPRFAAREAVVEALQKQGLYRGAKNNEMRLGLCSRTNDVIEP 504
Query: 1300 RATPQWFISME---QAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGV 1470
PQW+++ + AL A + + P+ A +EN DW ISRQ WG
Sbjct: 505 MIKPQWYVNCSMXGKEALDVAITDENKKLEFVPKQYTAEWRRWLENIRDWCISRQLWWGH 564
Query: 1471 PIPLFVHRHSGAPHPRSAALMRQVADRVEQQGV--DIWYSLDQTELLGTEADQ------- 1623
IP + A + + D++++ G D W + EA Q
Sbjct: 565 RIPAWY------------ATLEE--DQLKEVGAYSDHWVVARTEDDAREEAAQKFLGKKF 610
Query: 1624 -YEKITDILDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLL 1773
+ D+LD WF SG+ +VL G P P + G D W ++
Sbjct: 611 ELTRDPDVLDTWFSSGLFPLSVL---GWPDVTDDFKAFYPTSVLETGHDILFFWVARMVM 667
Query: 1774 TGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIK--TLGADILRLWIASTD 1947
G+ + P+ + H D HGRKMSKSLGN I+P ++I TLG RL + D
Sbjct: 668 MGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLGGLHKRLEEGNLD 727
Query: 1948 YSNEMSLSQE---------ILKRTTDAYR----------------------------RIR 2016
E+ +++E I + TDA R ++
Sbjct: 728 -PKEVIVAKEGQVKDFPNGIPECGTDALRFALVSYTAQSDKINLDILRVVGYRQWCNKLW 786
Query: 2017 NTARFLLGNL-HGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTI 2193
N RF + L G+ P L P M +WI+ + + ++F++ TI
Sbjct: 787 NAVRFAMMKLGSGYTPPQTLSP-ETMPFSCQWILSVLNKAISKAVVSLDAFEFSDAANTI 845
Query: 2194 LNFCSVDLGSLYLDVTKDRLYTMRED---APGRRSAQTAMYHLTAAFVRWIAPILSFTAD 2364
+ +Y++ K Y ++ A R AQ A++ +R + P + F +
Sbjct: 846 YAWWQYQFCDVYIEAIKP--YFAGDNPTFASERAHAQHALWISLETGLRLLHPFMPFVTE 903
Query: 2365 ELWSYLP 2385
ELW LP
Sbjct: 904 ELWQRLP 910
>gi|417844|sp|Q04462|SYV_RAT VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|484949|pir||PN0473 valine--tRNA
ligase (EC 6.1.1.9) - rat (fragment) >gi|207625 (M98327)
transfer RNA-Val synthetase [Rattus norvegicus]
Length = 594
Score = 143 bits (357), Expect = 7e-33
Identities = 136/483 (28%), Positives = 211/483 (43%), Gaps = 55/483 (11%)
Frame = +1
Query: 937 LAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVD 1116
+ HPF R++P++ + V E GTGAV P H Q D++V Q++ L ++ +D
Sbjct: 67 VVHPFL-SRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL------EAISIMD 119
Query: 1117 ARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIV 1296
++G + PPF GL ++A ++ + P C R K +
Sbjct: 120 SKGALVNVPPPF-----LGLPRFEARKAVLAALKEQGLFRGVKDNPMVVPLCNRSKDVVE 174
Query: 1297 FRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPI 1476
PQW++ + A ++A + P+ Q S ++N DW ISRQ WG I
Sbjct: 175 PLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRI 234
Query: 1477 PL-FVHRHSGA------PHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKI 1635
P F+ H A P R R A+ E+ + S D+ L E
Sbjct: 235 PAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAREKAAREFGVSPDKISLQQDE------- 287
Query: 1636 TDILDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTGVAM 1788
D+LD WF SG+ ++ G P P L G D W ++ G+ +
Sbjct: 288 -DVLDTWFSSGLFPFSIF---GWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKL 343
Query: 1789 DNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTL-------------------- 1908
P+++ H D HGRKMSKSLGN I+P D+I +
Sbjct: 344 TGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVE 403
Query: 1909 -----------------GADILRLWI-ASTDYSNEMSLSQEILKRTTDAYRRIRNTARFL 2034
G D LR + A T +++L + ++ N +F
Sbjct: 404 KAKEGQRADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFA 463
Query: 2035 LGNL-HGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSV 2211
L L GF P+ P +DRWI R E + + YDF + +F
Sbjct: 464 LRGLGKGFVPSPTSKPEGHESLVDRWIRSRLAEAVRLSNEGFQAYDFPAVTTAQYSFWLY 523
Query: 2212 DLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
+L +YL+ K L + D A+ +Y VR ++P + F +EL+ LP
Sbjct: 524 ELCDVYLECLKPVLNGV--DQVAADCARQTLYTCLDVAVRLLSPFMPFVTEELFQRLP 579
>gi|2501065|sp|P56000|SYV_HELPY VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|2314306|gb|AAD08195.1| (AE000621)
valyl-tRNA synthetase (valS) [Helicobacter pylori 26695]
Length = 874
Score = 141 bits (351), Expect = 4e-32
Identities = 158/627 (25%), Positives = 247/627 (39%), Gaps = 20/627 (3%)
Frame = +1
Query: 154 FLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKY 333
F L PP G +H+GHA+ L+DI+ + K +DG+ Y PG D G+ + +EK+
Sbjct: 44 FCLMMPPPNVTGVLHIGHALTLSLQDILARYKRMDGYKTLYQPGLDHAGIATQNVVEKQL 103
Query: 334 GKVGV---TLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIR 504
G+ L +F +K E+ + KRLG+ + T+D +
Sbjct: 104 LSQGIKKEDLGREEFIKKVWEWKEKSGGAILEQMKRLGVSAAFSRTRFTMDKGLQRAVKL 163
Query: 505 ALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFN 684
A K +KG +I+ V+WC G AL++ E+EY ++ + + Y + V
Sbjct: 164 AFLKWYEKGLIIQDNYMVNWCTKDG-ALSDIEVEYEERKGALYYIRYYLENQKDYLVVA- 221
Query: 685 ATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXX 864
TT P TL A+ V P
Sbjct: 222 --------------TTRPETLFGDSALMVNPN---------------------------- 239
Query: 865 XXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQ 1044
E H + A + L H P ++ HV E GTG V PGH
Sbjct: 240 ------DERYKHLVGQKAILP---LIHRTIP-----IIADEHVEMEFGTGCVKVTPGHDF 285
Query: 1045 EDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXX 1224
D++V G +H ++ D +G+ F L +A +V+
Sbjct: 286 NDYEV----GKRHHLETIKI--FDEKGILNAHCGEFENLERL-----EARDKVVERLKEN 334
Query: 1225 XXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITH--VTWYP-QW 1395
E H HC+R + + QWF+ E + ++++ I +YP W
Sbjct: 335 ALLEKIEEHTHQVGHCYRCHNVVEPYVSKQWFVKPE---IAQSSIEKIQQGLARFYPSNW 391
Query: 1396 GQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDI 1575
M E RP W ISRQ WG IP+F ++
Sbjct: 392 INNYNAWMRELRP-WCISRQLFWGHQIPVFTCENNHQ----------------------- 427
Query: 1576 WYSLDQTELLGT-EADQYEKITDILDVWFDSGITHEAVL----LERGLPKPADL------ 1722
+ SLD T +++ E+ D+LD WF SG+ + L + GL +DL
Sbjct: 428 FVSLDTPLSCPTCKSETLEQDKDVLDTWFSSGLWAFSTLGWGQEKSGLFNESDLKDFYPN 487
Query: 1723 --YLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDI 1896
+ G D W L ++ P+K H D+ G KMSKS GN I+P ++
Sbjct: 488 TTLITGFDILFFWVARMLFCSESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEM 547
Query: 1897 IKTLGADILRLWIAS-TDYSNEMSLSQEILKRTTDAYRRIRNTARFL 2034
I+ GAD LR +A+ ++ LS L+ + ++ N A +L
Sbjct: 548 IEKYGADSLRFTLANLCATGRDIKLSTTHLENNKNFANKLFNAASYL 594
>gi|3915080|sp|O51680|SYV_BORBU VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|2688666 (AE001173) valyl-tRNA
synthetase (valS) [Borrelia burgdorferi]
Length = 875
Score = 137 bits (342), Expect = 4e-31
Identities = 164/735 (22%), Positives = 300/735 (40%), Gaps = 32/735 (4%)
Frame = +1
Query: 172 PPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT 351
PP G +H+GHA+N +L+D++++ K + + ++ G D G+ + E+ K+G +
Sbjct: 44 PPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHLKKIGKS 103
Query: 352 LDAVQFRQKCREYAAEQIQLQRRDFKR---LGIIGDWDAPYKTLDFRFEADE--IRALAK 516
D + RE ++I + +D R + I A Y RF DE +A+ K
Sbjct: 104 KDDFE-----REELVQEI-FKLKDRHRGIIVNQINKLGASYDHSRERFTLDENLCKAVNK 157
Query: 517 IVD----KGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFN 684
+ KG + RG V+ GS +++ EIEY + + V Y +D S+
Sbjct: 158 VFKDLYFKGLIYRGEYLVNLDPGSGSVVSDEEIEYKEVDGKLYFVKY-FIDNSSF----- 211
Query: 685 ATLPPDVQLAVPIWTTTPWTLPASLAISVGPTLD-YVLVEGPTHSGQRRWXXXXXXXXXX 861
+ + TT P T+ AI+V P + Y + G
Sbjct: 212 ----------IEVATTRPETMFGDTAIAVNPNDERYKSLVG------------------- 242
Query: 862 XXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHG 1041
E+ I + K I ++ +V + GTGA+ P H
Sbjct: 243 -------KEVTIPLTTK-----------------KIKVIADFYVDSAFGTGALKVTPAHD 278
Query: 1042 QEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXX 1221
D ++ +++ + +++N + G P L GL A I
Sbjct: 279 PNDFEISKRHNI------SKVNILTQDGKLNKNVP----LQYQGLSAKDARFKIETELME 328
Query: 1222 XXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITH--VTWYPQW 1395
+ HC+R I + QWF+ M+ L ALKA+ + + +YP+
Sbjct: 329 KGFLQDVKKHKQQVGHCYRSGEVIEPYLSTQWFVRMK--PLADKALKALENGELKFYPKK 386
Query: 1396 GQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDI 1575
+ + N DW ISRQ WG IP +
Sbjct: 387 WENTYKYWLSNIRDWCISRQLVWGHRIP-------------------------------V 415
Query: 1576 WYSLDQTELLGTEAD----------QYEKITDILDVWFDSGITHEAVLLERGLPK----- 1710
WY++D +EL+ ++ D ++ + D+LD WF S + + L G P
Sbjct: 416 WYNVDTSELIVSDTDPSLDEKNMGKRFVQDPDVLDTWFSSWLWPFSSL---GWPNVDVDF 472
Query: 1711 ----PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNG 1878
P + + D W ++ G+ P+K D+ G+KMSKSLGNG
Sbjct: 473 KNYYPTNTLITAYDIIFFWVARMVMAGLEFTGQVPFKDVYITPLLRDKQGKKMSKSLGNG 532
Query: 1879 IEPQDIIKTLGADILRLWIASTD-YSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGF 2055
I+P DII G+D LR ++ ++++ + ++ N ++F+L NL
Sbjct: 533 IDPLDIINEYGSDSLRFTLSFLSVQGQDLNIDAKDFMFGAKFANKVFNASKFILLNLKN- 591
Query: 2056 DPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLD 2235
L+ + +D +D+W++ +++++ Y + E + + F D Y++
Sbjct: 592 RKILNDLKFND---IDKWLLTSLNSTILGVESSFANYKYNEASKFVYEFFWNDFCDWYIE 648
Query: 2236 VTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWS 2376
++K L D ++ + + + + P + F ++++S
Sbjct: 649 ISKIDLNNENVDIQNMAISKLLFFLKKSLLI--LHPFIPFVTEKIYS 693
>gi|1351181|sp|P47576|SYV_MYCGE VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|1361896|pir||I64236 valine--tRNA
ligase (EC 6.1.1.9) - Mycoplasma genitalium (SGC3)
>gi|3844913 (U39714) valyl-tRNA synthetase (valS)
[Mycoplasma genitalium]
Length = 837
Score = 130 bits (323), Expect = 7e-29
Identities = 147/691 (21%), Positives = 259/691 (37%), Gaps = 15/691 (2%)
Frame = +1
Query: 172 PPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT 351
PP G +H+GHA + D I++ K + GF +IPG+D G IA + KY K+ +
Sbjct: 45 PPNLTGTLHIGHAFEVSITDQIMRFKKMQGFSINWIPGFDHAG----IATQTKYEKIALK 100
Query: 352 LDAVQF-------RQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRAL 510
+ F + +A Q ++ + K LG+ +W TL +
Sbjct: 101 ENQKYFDADDDKKSEMIMNWALNQSEIIKNQLKSLGVCLNWSETKFTLSEQANKIVNNCF 160
Query: 511 AKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNAT 690
+ + G + + V+W +A++ E+ + V Y
Sbjct: 161 KNLYENGFIYQAYTLVNWDTKLNTAISNIEVINKPVNQHLHYVVYK-------------- 206
Query: 691 LPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXX 870
L D + + + TT P T+ A + + V P
Sbjct: 207 LANDSKQELIVATTRPETIFADVCLLVNPK----------------------------DK 238
Query: 871 RYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQED 1050
RY ++ +P + IP++ ++V + GTG + P H
Sbjct: 239 RY-------------TNFWNKLVVNPL-TGKQIPVVTDSYVDIKFGTGILKCTPAHD--- 281
Query: 1051 HQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXX 1230
F Y + Y L+ +D+ G+ F GL + +A IV
Sbjct: 282 ---FNDYEINTKYKFDFLSCIDSNGILNQNASKFQ-----GLSVLQARNKIVKWLEKNKL 333
Query: 1231 XXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQWGQARI 1410
+ + R T + + QWF+ + + LK ++ YP + R
Sbjct: 334 LVKSIPLTSNVGFSERSGTVVEPMLSKQWFVDLPK-------LKDHLYLKKYPDFIPKRF 386
Query: 1411 LSMIEN-----RPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDI 1575
+ N +P W ISRQ WG IP++ ++G
Sbjct: 387 NKQVSNWLNKLKP-WCISRQLIWGHKIPVWFENNTG------------------------ 421
Query: 1576 WYSLDQTELLGTEADQYEKITDILDVWFDSGITHEAVLL--ERGLPKPADLYLEGADQHR 1749
+ E Y + D+LD WF S + L + +L + G D
Sbjct: 422 --EIVVGEKPSKNLQNYTRSKDVLDTWFSSSLWPLICLNWEQDDSFHETELLVTGYDILF 479
Query: 1750 GWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRL 1929
W L P+K L HG D+ RKMSKSL NGI+P D+I+ GAD +RL
Sbjct: 480 FWVLRMLFNSFFETKKLPFKTVLIHGLVRDEQNRKMSKSLNNGIDPVDLIRNYGADAVRL 539
Query: 1930 WIASTDY-SNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDR 2106
++ S +++ S++ +K + ++ N +F++ + + + L LS +
Sbjct: 540 FLCSNHTPGDDLIFSEQKIKSAWNFLNKLWNVTKFVIQLENDQEISYDLDKLS---LSET 596
Query: 2107 WIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTK 2244
WI+ + ++ Q I ++ A Q ++ F D + +++ K
Sbjct: 597 WILAKLDKVIQKITKLLDKFQLALANQILVKFVWDDFCNTFIEAIK 642
>gi|147906 (J03497) valyl tRNA synthetase [Escherichia coli]
Length = 951
Score = 125 bits (311), Expect = 2e-27
Identities = 185/778 (23%), Positives = 308/778 (38%), Gaps = 78/778 (10%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E + E WE+ ++ + + F + PP G +H+GHA + + D +I+ + +
Sbjct: 11 EQPLYEHWEKQGYFKP--NGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRM 68
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKY----GKVGVTLDAVQFRQKCREYAAEQIQLQRRD 423
G + + G D G+ ++ +E+K GK A F K E+ AE R
Sbjct: 69 QGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGAEAFIDKIWEWKAESGGTITRQ 128
Query: 424 FKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
+RLG DW+ T+D ++ + + RG + V+W +A+++ E+
Sbjct: 129 MRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEV 188
Query: 604 EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTL 783
E + M + YP D + A D + + + TT P TL ++V P
Sbjct: 189 ENRESKGSMWHIRYPLADGAKTA---------DGKDYLVVATTRPETLLGDTGVAVNP-- 237
Query: 784 DYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDR 963
E P + +Y I L+ +R
Sbjct: 238 -----EDPRYK--------------DLIGKYVILPLV---------------------NR 257
Query: 964 TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL-------LNHYSAAELNPVDAR 1122
IP++ H E GTG V P H D++V +++ L + D +
Sbjct: 258 RIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTK 317
Query: 1123 G----VYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTP 1290
G VY P L + A +V + P+ R
Sbjct: 318 GNESDVYSSEIP----AEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVV 373
Query: 1291 IVFRATPQWFISMEQAALRSAALKAITH--VTWYPQWGQARILSMIENRPDWTISRQRTW 1464
I T QW++ + L A++A+ + + + P+ + S + + DW ISRQ W
Sbjct: 374 IEPMLTDQWYVRAD--VLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWW 431
Query: 1465 GVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDI 1644
G IP + R+ +R + G D+ D+ D+
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVR----KENNLGADVVLRQDE---------------DV 472
Query: 1645 LDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTG---VAM 1788
LD WF S + + L G P+ P + + G D W ++ +
Sbjct: 473 LDTWFSSALWTFSTL---GWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKD 529
Query: 1789 DNA---APYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNE 1959
+N P+ G D G+KMSKS GN I+P D++ G + L T +
Sbjct: 530 ENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVD--GISLPELLEKRTGNMMQ 587
Query: 1960 MSLSQEILKRT------------TDAYR----------------------------RIRN 2019
L+ +I KRT TDA R ++ N
Sbjct: 588 PQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWN 647
Query: 2020 TARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKA---AYTRYDFAEIVQT 2190
+RF+L N G D + ++ +A DRWI+ E QTIKA A + F
Sbjct: 648 ASRFVLMNTEGQDCGFNGGEMTLSLA-DRWIL---AEFNQTIKAYREALDSFRFDIAAGI 703
Query: 2191 ILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADEL 2370
+ F YL++TK + E R + + + +R PI+ F + +
Sbjct: 704 LYEFTWNQFCDWYLELTKPVMNGGTE--AELRGTRHTLVTVLEGLLRLAHPIIPFITETI 761
Query: 2371 W---SYLPGDHADNVL 2409
W L G AD ++
Sbjct: 762 WQRVKVLCGITADTIM 777
>gi|4490646|emb|CAB38577.1| (Z98762) putative valyl trna synthetase
[Schizosaccharomyces pombe]
Length = 950
Score = 125 bits (310), Expect = 2e-27
Identities = 138/584 (23%), Positives = 223/584 (37%), Gaps = 14/584 (2%)
Frame = +1
Query: 148 PLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK 327
P+F + PP G++H+GHA+ ++D + + + G+ + PG D G+ + +EK
Sbjct: 58 PMFPILLPPPNITGKLHIGHALTITIQDALARFYAMHGYKVSFRPGTDHAGIATQSVVEK 117
Query: 328 KYGKVGVTLDAVQFRQKCREYAAEQIQLQR---RDFKRLGIIGDWDAPYKTLDFRFEADE 498
K GV + + + + Q++ Q+ K I DWD + T+D
Sbjct: 118 YLQKKGVYRNQLSKDELLSSIHSWQVKYQKSIINQLKSFEAIFDWDNIFYTMDQNRSEAV 177
Query: 499 IRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAV 678
A + + G + R + V+WC SA+++ E+E P+ Y P +
Sbjct: 178 NEAFISLFNAGLIYRANRFVNWCPKLESAVSDIEVESQQINKPVTK--YVDNTPVEFGWL 235
Query: 679 FNAT--LPPDVQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXX 852
+ + L + + TT P T+ AI+V P
Sbjct: 236 YEISYQLEGSDNEQLNVSTTRPETIFGDRAIAVSP------------------------- 270
Query: 853 XXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAP 1032
RY + HP D IP++ N V GTG + P
Sbjct: 271 ---HDERY-------------KKYVGRFVKHPLIDDLLIPVICDNAVDRHFGTGVLKITP 314
Query: 1033 GHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDX 1212
H D+++ +++ + ++ +D G + + + G++ KA IV
Sbjct: 315 MHSIVDYEIAKRHNI------DCVSIMDKSGNLINCSKEVN-----GMNRLKARSKIVRL 363
Query: 1213 XXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAITHVTWYPQ 1392
C R I PQW++S++ +L+ LK+ + P
Sbjct: 364 LQQRNRLVEQVPHSLILSVCSRTGDVIEPVMVPQWYLSVD--SLKKEVLKSSNKLKLVPS 421
Query: 1393 WGQARILSMIENRPDWTISRQRTWGVPIPLF----VHRHSGAPHPRSAALMRQVADRVEQ 1560
+ S + DW ISRQ WG IP++ + AP+ AL V V Q
Sbjct: 422 LARKEWDSWFKKMGDWCISRQIWWGHQIPVWKILEEDKWIAAPN-YEKALQLSVGKSVSQ 480
Query: 1561 QGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSGITHEAVLLERGLPKPADL----YL 1728
+D+LD WF S + L G PK D+ ++
Sbjct: 481 D------------------------SDVLDTWFSSAL---LPLSAFGWPKSKDIQPLPFI 513
Query: 1729 E-GADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDII 1899
E G D W L N P+K+ + H D GRKMSKSLGN I+P DII
Sbjct: 514 ESGQDILFFWIARMALLCKYFSNELPFKEIILHPLVRDSEGRKMSKSLGNVIDPMDII 571
>gi|537100 (U14003) valyl-tRNA synthetase [Escherichia coli]
Length = 951
Score = 123 bits (306), Expect = 7e-27
Identities = 184/778 (23%), Positives = 307/778 (38%), Gaps = 78/778 (10%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E + E WE+ ++ + + F + PP G +H+GHA + + D +I+ + +
Sbjct: 11 EQPLYEHWEKQGYFKP--NGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRM 68
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKY----GKVGVTLDAVQFRQKCREYAAEQIQLQRRD 423
G + + G D G+ ++ +E+K GK F K E+ AE R
Sbjct: 69 QGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ 128
Query: 424 FKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
+RLG DW+ T+D ++ + + RG + V+W +A+++ E+
Sbjct: 129 MRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEV 188
Query: 604 EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTL 783
E + M + YP D + A D + + + TT P TL ++V P
Sbjct: 189 ENRESKGSMWHIRYPLADGAKTA---------DGKDYLVVATTRPETLLGDTGVAVNP-- 237
Query: 784 DYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDR 963
E P + +Y I L+ +R
Sbjct: 238 -----EDPRYK--------------DLIGKYVILPLV---------------------NR 257
Query: 964 TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL-------LNHYSAAELNPVDAR 1122
IP++ H E GTG V P H D++V +++ L + D +
Sbjct: 258 RIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTK 317
Query: 1123 G----VYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTP 1290
G VY P L + A +V + P+ R
Sbjct: 318 GNESDVYSSEIP----AEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVV 373
Query: 1291 IVFRATPQWFISMEQAALRSAALKAITH--VTWYPQWGQARILSMIENRPDWTISRQRTW 1464
I T QW++ + L A++A+ + + + P+ + S + + DW ISRQ W
Sbjct: 374 IEPMLTDQWYVRAD--VLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWW 431
Query: 1465 GVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDI 1644
G IP + R+ +R + G D+ D+ D+
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVR----KENNLGADVVLRQDE---------------DV 472
Query: 1645 LDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTG---VAM 1788
LD WF S + + L G P+ P + + G D W ++ +
Sbjct: 473 LDTWFSSALWTFSTL---GWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKD 529
Query: 1789 DNA---APYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNE 1959
+N P+ G D G+KMSKS GN I+P D++ G + L T +
Sbjct: 530 ENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVD--GISLPELLEKRTGNMMQ 587
Query: 1960 MSLSQEILKRT------------TDAYR----------------------------RIRN 2019
L+ +I KRT TDA R ++ N
Sbjct: 588 PQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWN 647
Query: 2020 TARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKA---AYTRYDFAEIVQT 2190
+RF+L N G D + ++ +A DRWI+ E QTIKA A + F
Sbjct: 648 ASRFVLMNTEGQDCGFNGGEMTLSLA-DRWIL---AEFNQTIKAYREALDXFRFDIAAGI 703
Query: 2191 ILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADEL 2370
+ F YL++TK + E R + + + +R PI+ F + +
Sbjct: 704 LYEFTWNQFCDWYLELTKPVMNGGTE--AELRGTRHTLVTVLEGLLRLAHPIIPFITETI 761
Query: 2371 W---SYLPGDHADNVL 2409
W L G AD ++
Sbjct: 762 WQRVKVLCGITADTIM 777
>gi|68537|pir||SYECVT valine--tRNA ligase (EC 6.1.1.9) - Escherichia
coli >gi|43302|emb|CAA29322| (X05891) valyl-tRNA
synthetase [Escherichia coli]
Length = 951
Score = 123 bits (306), Expect = 7e-27
Identities = 184/778 (23%), Positives = 307/778 (38%), Gaps = 78/778 (10%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E + E WE+ ++ + + F + PP G +H+GHA + + D +I+ + +
Sbjct: 11 EQPLYEHWEKQGYFKP--NGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRM 68
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKY----GKVGVTLDAVQFRQKCREYAAEQIQLQRRD 423
G + + G D G+ ++ +E+K GK F K E+ AE R
Sbjct: 69 QGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ 128
Query: 424 FKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
+RLG DW+ T+D ++ + + RG + V+W +A+++ E+
Sbjct: 129 MRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEV 188
Query: 604 EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTL 783
E + M + YP D + A D + + + TT P TL ++V P
Sbjct: 189 ENRESKGSMWHIRYPLADGAKTA---------DGKDYLVVATTRPETLLGDTGVAVNP-- 237
Query: 784 DYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDR 963
E P + +Y I L+ +R
Sbjct: 238 -----EDPRYK--------------DLIGKYVILPLV---------------------NR 257
Query: 964 TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL-------LNHYSAAELNPVDAR 1122
IP++ H E GTG V P H D++V +++ L + D +
Sbjct: 258 RIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTK 317
Query: 1123 G----VYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTP 1290
G VY P L + A +V + P+ R
Sbjct: 318 GNESDVYSSEIP----AEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVV 373
Query: 1291 IVFRATPQWFISMEQAALRSAALKAITH--VTWYPQWGQARILSMIENRPDWTISRQRTW 1464
I T QW++ + L A++A+ + + + P+ + S + + DW ISRQ W
Sbjct: 374 IEPMLTDQWYVRAD--VLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWW 431
Query: 1465 GVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDI 1644
G IP + R+ +R + G D+ D+ D+
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVR----KENNLGADVVLRQDE---------------DV 472
Query: 1645 LDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTG---VAM 1788
LD WF S + + L G P+ P + + G D W ++ +
Sbjct: 473 LDTWFSSALWTFSTL---GWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKD 529
Query: 1789 DNA---APYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNE 1959
+N P+ G D G+KMSKS GN I+P D++ G + L T +
Sbjct: 530 ENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVD--GISLPELLEKRTGNMMQ 587
Query: 1960 MSLSQEILKRT------------TDAYR----------------------------RIRN 2019
L+ +I KRT TDA R ++ N
Sbjct: 588 PQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWN 647
Query: 2020 TARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKA---AYTRYDFAEIVQT 2190
+RF+L N G D + ++ +A DRWI+ E QTIKA A + F
Sbjct: 648 ASRFVLMNTEGQDCGFNGGEMTLSLA-DRWIL---AEFNQTIKAYREALDTFRFDIAAGI 703
Query: 2191 ILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADEL 2370
+ F YL++TK + E R + + + +R PI+ F + +
Sbjct: 704 LYEFTWNQFCDWYLELTKPVMNGGTE--AELRGTRHTLVTVLEGLLRLAHPIIPFITETI 761
Query: 2371 W---SYLPGDHADNVL 2409
W L G AD ++
Sbjct: 762 WQRVKVLCGITADTIM 777
>gi|2507438|sp|P07118|SYV_ECOLI VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|1790708 (AE000496) valine tRNA
synthetase [Escherichia coli]
Length = 951
Score = 123 bits (306), Expect = 7e-27
Identities = 184/778 (23%), Positives = 307/778 (38%), Gaps = 78/778 (10%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
E + E WE+ ++ + + F + PP G +H+GHA + + D +I+ + +
Sbjct: 11 EQPLYEHWEKQGYFKP--NGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRM 68
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKY----GKVGVTLDAVQFRQKCREYAAEQIQLQRRD 423
G + + G D G+ ++ +E+K GK F K E+ AE R
Sbjct: 69 QGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQ 128
Query: 424 FKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
+RLG DW+ T+D ++ + + RG + V+W +A+++ E+
Sbjct: 129 MRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEV 188
Query: 604 EYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAISVGPTL 783
E + M + YP D + A D + + + TT P TL ++V P
Sbjct: 189 ENRESKGSMWHIRYPLADGAKTA---------DGKDYLVVATTRPETLLGDTGVAVNP-- 237
Query: 784 DYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDR 963
E P + +Y I L+ +R
Sbjct: 238 -----EDPRYK--------------DLIGKYVILPLV---------------------NR 257
Query: 964 TIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL-------LNHYSAAELNPVDAR 1122
IP++ H E GTG V P H D++V +++ L + D +
Sbjct: 258 RIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTK 317
Query: 1123 G----VYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTP 1290
G VY P L + A +V + P+ R
Sbjct: 318 GNESDVYSSEIP----AEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVV 373
Query: 1291 IVFRATPQWFISMEQAALRSAALKAITH--VTWYPQWGQARILSMIENRPDWTISRQRTW 1464
I T QW++ + L A++A+ + + + P+ + S + + DW ISRQ W
Sbjct: 374 IEPMLTDQWYVRAD--VLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWW 431
Query: 1465 GVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDI 1644
G IP + R+ +R + G D+ D+ D+
Sbjct: 432 GHRIPAWYDEAGNVYVGRNEDEVR----KENNLGADVVLRQDE---------------DV 472
Query: 1645 LDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLTG---VAM 1788
LD WF S + + L G P+ P + + G D W ++ +
Sbjct: 473 LDTWFSSALWTFSTL---GWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKD 529
Query: 1789 DNA---APYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNE 1959
+N P+ G D G+KMSKS GN I+P D++ G + L T +
Sbjct: 530 ENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVD--GISLPELLEKRTGNMMQ 587
Query: 1960 MSLSQEILKRT------------TDAYR----------------------------RIRN 2019
L+ +I KRT TDA R ++ N
Sbjct: 588 PQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWN 647
Query: 2020 TARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKA---AYTRYDFAEIVQT 2190
+RF+L N G D + ++ +A DRWI+ E QTIKA A + F
Sbjct: 648 ASRFVLMNTEGQDCGFNGGEMTLSLA-DRWIL---AEFNQTIKAYREALDSFRFDIAAGI 703
Query: 2191 ILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADEL 2370
+ F YL++TK + E R + + + +R PI+ F + +
Sbjct: 704 LYEFTWNQFCDWYLELTKPVMNGGTE--AELRGTRHTLVTVLEGLLRLAHPIIPFITETI 761
Query: 2371 W---SYLPGDHADNVL 2409
W L G AD ++
Sbjct: 762 WQRVKVLCGITADTIM 777
>gi|6226195|sp|O67411|SYV_AQUAE VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|2983819 (AE000739) valyl-tRNA
synthetase [Aquifex aeolicus]
Length = 1165
Score = 120 bits (297), Expect = 8e-26
Identities = 93/399 (23%), Positives = 166/399 (41%), Gaps = 3/399 (0%)
Frame = +1
Query: 172 PPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK---KYGKV 342
PP G +H+GHA+N L+D+I++ + + G + ++PG+D G+ + +EK K GK
Sbjct: 42 PPNVTGSLHMGHALNATLQDVIVRWQRMRGRECVWVPGFDHAGIATQYVVEKQLAKEGKS 101
Query: 343 GVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIV 522
+ L +F +K E+ + R +LG+ DW TLD F +A +
Sbjct: 102 RLELGREEFLKKVWEWVPKSRNAIRTQLTKLGVSVDWKRERFTLDEGFSRAVRKAFRTLF 161
Query: 523 DKGHLIRGTKPVHWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPD 702
++G + R V+WC + +AL++ E+EY ++ + + YP +D + D
Sbjct: 162 EEGLIYRAEYIVNWCPNDRTALSDLEVEYEEEKGSLWYIKYPIVDENG----------KD 211
Query: 703 VQLAVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGI 882
+ + TT P T+ A++V P D R+ +
Sbjct: 212 TGEFITVATTRPETMLGDTAVAVNPNDD-------------RYKHLVGKRARLPLVNWER 258
Query: 883 AELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVF 1062
+L +G ++ IP++ V + GTGAV P H D ++
Sbjct: 259 KDL------RGNSV-----------SNLIPIIADERVKMDFGTGAVKITPAHDPLDFEIG 301
Query: 1063 QQYGLLNHYSAAELNPVDARGVYLPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXX 1242
+ + L + +D G F AG+ ++A IV
Sbjct: 302 KTHDL------PFVRVIDETGRMNENAGDF-----AGMDRYEAREAIVAKLREDELLEKE 350
Query: 1243 XEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRSAALKAI 1368
E+ HS HC+R KT I + QWF+ + ++ ++K +
Sbjct: 351 EEITHSVGHCYRCKTVIEPMVSVQWFVKVSDPRIKDISIKVV 392
Score = 107 bits (265), Expect = 4e-22
Identities = 75/264 (28%), Positives = 127/264 (47%), Gaps = 19/264 (7%)
Frame = +1
Query: 1615 ADQYEKITDILDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSS 1767
++ E+ D+LD WF S + V G P+ P DL + G D W
Sbjct: 715 SENLEQERDVLDTWFSSALWPFGVF---GWPESTEDLKNLYPTDLLVTGFDIIFFWVARM 771
Query: 1768 LLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIA-ST 1944
++ G P+ H D++GRKMSK++GN I+P DII+ GAD LR +A T
Sbjct: 772 IMMGTHFMKDIPFYDVYVHALVRDKYGRKMSKTIGNVIDPLDIIERYGADALRFTLAILT 831
Query: 1945 DYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRA 2124
++ L++E + +I N AR++L N D + ++ + D+WI+ +
Sbjct: 832 VQGRDIKLAEEKFEGYKHFANKIWNAARYVLMNTPE-DFIARIPYMAPLKPEDKWIITKL 890
Query: 2125 FELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLY------TMREDAPGRR 2286
E + + A Y +++ I F D Y++ TK+R+Y E A
Sbjct: 891 NETAEEVNKALENYQYSQAAHAIYEFFWSDYCDWYIEFTKERIYKKAPEDNEEEKAKVEN 950
Query: 2287 SAQTAMY---HLTAAFVRWIAPILSFTADELWSYLPGDHADNV 2406
TA+Y ++ +R + P + + +ELW LP +++
Sbjct: 951 ERTTALYTLHYVLEKALRILHPFMPYITEELWHKLPNAEGESI 993
>gi|3219290|dbj|BAA28839| (AB008525) Valyl tRNA Synthetase [Giardia
intestinalis]
Length = 1218
Score = 117 bits (290), Expect = 5e-25
Identities = 168/615 (27%), Positives = 260/615 (41%), Gaps = 85/615 (13%)
Frame = +1
Query: 58 GDLPKR-EPAILER-----WERDDFYA---QLRAHAK-GRPLFLLHDGPPYANGQIHLGH 207
G PK P+++E+ WE F++ Q +K R F L PP G +H+GH
Sbjct: 55 GAWPKAYNPSVIEKSWYEWWEAAGFFSPDMQKNIRSKDSRCKFTLLIPPPNVTGSLHIGH 114
Query: 208 AVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIE----KKYGKVGVTLDAVQFRQ 375
A+ ++D +++ + G+ Y+PG D G+ + +E K GK L +F +
Sbjct: 115 ALTNSIQDALVRWYRMMGYRTLYLPGLDHAGIATQSVVERNIMKTEGKTRHDLGRERFLE 174
Query: 376 KCREYAAEQIQLQRRDFKRLGIIG---DWDAPYKTLDFRFEADEIRALAKIVDKGHLIRG 546
R +A ++ Q R +L I+G DW TLD + K+ ++G + R
Sbjct: 175 --RAWAWKE-QFGGRILSQLRILGSSFDWSRSVFTLDPARSRVHNESFVKLFNRGLIYRD 231
Query: 547 TKPVHWCFDCGSALAEAEIEYTDKTSPMV--------DVAYP---------ALDPSALAA 675
++ V+W +A+++ E+EY D P +YP + PS LA
Sbjct: 232 SRLVNWDCSLQTAVSDVEVEYIDLKLPRQLSVRNHDPGKSYPFGYLWRFSYKVIPSYLAD 291
Query: 676 VFNATLPPDVQLA---------VPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRR 828
A L Q +T++ L S +I+ G Y L+ H
Sbjct: 292 KSEADLLTAFQSGELKFACQDCAKFYTSSILPLLDSDSIAEGSPSPYELLR--LHQCADP 349
Query: 829 WXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQH--------ILAHPFYPDRTIPLLLG 984
R E +I +A H L HP + +P++L
Sbjct: 350 GCLFTAEELVVATTR---PETIIGDTAVAVHPRDHRYTDLHGRCLFHPILLGKKVPIVLD 406
Query: 985 NH-VSAEDGTGAVHTAPGHGQEDH-----------QVFQQYGLL------NHYSAAELNP 1110
+ V E GTG V P H D Q+F G + H P
Sbjct: 407 DVLVDMEYGTGCVKVTPAHDPNDFESGRRNKLEYLQIFTDDGRIVQMIESTHNGITYHLP 466
Query: 1111 VDARGV--YLPTTPPFSELTLAGLHIWKA-NPLIVDXXXXXXXXXXXXEMHHSYPHCWRH 1281
GV + S L A L+ + NP+++ C R
Sbjct: 467 ARFAGVKRFDGRLEMLSYLKEAALYRGRTPNPMVIGT-------------------CQRS 507
Query: 1282 KTPIVFRATPQWFISMEQAALRSAALKAI-------THVTWYPQWGQARILSMIENRPDW 1440
+ PQW+++ EQ A R AL A+ + P+ + S + N W
Sbjct: 508 GDILEPMVKPQWYLNCEQMAQR--ALNAVYAPPSEAERLLIVPEMHKDTWKSYLANIRPW 565
Query: 1441 TISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYS--LDQTELLGTE 1614
ISRQ WG IP + P P VA E++ I LD L +
Sbjct: 566 CISRQLWWGHRIPCYKFWFGDNPEPSGDKTEHWVAACSEEEARRIITKKHLDVQGQLHLK 625
Query: 1615 ADQYEKITDILDVWFDSGITHEAVLL--ERGLPK--PADLYLEGADQHRGWFQSSLLTGV 1782
D D+ D WF SG+ + ER + P + G D W ++ +
Sbjct: 626 QDD-----DVTDTWFSSGLFPFSCFADSERDFSRYYPGSVLETGNDIIFFWVARMVMLSL 680
Query: 1783 AMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIK 1902
+ N P+++ H D HG KMSKS GN ++P D+IK
Sbjct: 681 ELYNVLPFREVYLHALVRDAHGAKMSKSKGNVVDPIDVIK 720
>gi|530479|emb|CAA83826| (Z33289) Ile-tRNA synthetase [Mycoplasma
capricolum]
Length = 129
Score = 106 bits (263), Expect = 7e-22
Identities = 45/84 (53%), Positives = 65/84 (76%)
Frame = +1
Query: 1810 QCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKR 1989
Q ++HG D+ G KMSKSLGNG++P + LGADI RLW+ASTD++++ + +EI+K+
Sbjct: 14 QLVSHGMXTDEKGNKMSKSLGNGVDPIEFSNELGADIXRLWVASTDFTDDQKIGKEIIKQ 73
Query: 1990 TTDAYRRIRNTARFLLGNLHGFDP 2061
++AYR+IRNT RF+L NL+ FDP
Sbjct: 74 ISEAYRKIRNTMRFILANLNDFDP 97
>gi|147763 (M10428) isoleucyl-tRNA synthetase [Escherichia coli]
Length = 71
Score = 106 bits (263), Expect = 7e-22
Identities = 46/69 (66%), Positives = 54/69 (77%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANG 189
DYK+TL+LP T FPMRGDL KREP +L RW DD Y +RA KG+ F+LHDGPPYANG
Sbjct: 3 DYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANG 62
Query: 190 QIHLGHAVN 216
IH+GH+VN
Sbjct: 63 SIHIGHSVN 71
>gi|4432760|dbj|BAA28842| (AB008528) Valyl tRNA Synthetase
[Trichomonas vaginalis]
Length = 722
Score = 106 bits (262), Expect = 1e-21
Identities = 155/645 (24%), Positives = 258/645 (39%), Gaps = 78/645 (12%)
Frame = +1
Query: 451 WDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEY---TDKT 621
W Y TLD + I A K+ D+G + R + V+W +A+++AE+EY T +T
Sbjct: 45 WKDTYYTLDEKRSESVIAAFIKLFDEGLVYRSERLVNWDCALKTAISDAEVEYITLTKRT 104
Query: 622 SPMV-DVAYPALDPSALAAVFNATLPPDVQLA---VPIWTTTPWTLPASLAISVGPTLDY 789
V + YP + + D + V I TT T+ A+++ P
Sbjct: 105 KLNVPNHKYPQYPFGVMTHFYYEICDKDGKKTGEKVEIATTRLETMLGDTAVAINPK--- 161
Query: 790 VLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTI 969
RY +HG + ++P R +
Sbjct: 162 -------------------------DARYNH----LHGM------------YVWHPIREV 180
Query: 970 PLLLGNH---VSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPT 1140
P+ + V GTG V PGH D++V+++ H ++ + G P
Sbjct: 181 PIPIIQDEILVDMNFGTGVVKVTPGHDPNDYEVYKR-----HPEIGLISILTPDGAIAPG 235
Query: 1141 TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
FS G+ + A +V + R + TPQWF
Sbjct: 236 YGQFS-----GMMRFDARVEMVKWMKERGLYKEEKDHEMRLGITQRGHDIVEQVITPQWF 290
Query: 1321 ISMEQAALRSAALKAITHVTWYPQWGQARIL---------SMIENRPDWTISRQRTWGVP 1473
++ A R A+KA+ G+ +I+ EN W ISRQ WG
Sbjct: 291 VNTTDMAAR--AIKAVDD-------GELKIVPDEFVVDWKKWHENIRPWCISRQLMWGHR 341
Query: 1474 IPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWY---SLDQTELLGTEADQYE--KIT 1638
IP + R D +G W S ++ G +A+ E ++T
Sbjct: 342 IPAY----------------RVQIDGKWAEGNGEWVAAASQEEAIAKGAKANNVEPSRVT 385
Query: 1639 -----DILDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLT 1776
D+LD WF S + + + G P P + G D W ++
Sbjct: 386 VEQDPDVLDTWFSSALLPFSGV---GWPSNEERLNRYFPNSILETGWDILTFWVSRMVMM 442
Query: 1777 GVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTL---------------- 1908
+ + N P+ L H D GRKMSKSLGN I+P+ +I +
Sbjct: 443 SLTLTNKVPFHTILLHPLVRDAQGRKMSKSLGNVIDPRHVINGIELEDLVAEIENSTFDD 502
Query: 1909 ---------------------GADILRLWIASTDYSNE-MSLSQEILKRTTDAYRRIRNT 2022
G D +RL + S +N +L+ ++ + ++ N
Sbjct: 503 KEKKIAIDGRKADFPNGIPQCGTDAMRLALCSFAGANRTANLNVSVIVSYRNFCNKMWNA 562
Query: 2023 ARFLLGNLHGFDP--TLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTIL 2196
RF L N F+P + + S LD+W + + + A + A+ V +
Sbjct: 563 VRFALPNFDKFNPEDSHKDLDASKTTPLDKWALKKLSLAIKAATAGLQDFKMADAVNGMT 622
Query: 2197 NFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWS 2376
+F + S+YL+ K +DA + +Y + +R + P + + +ELW
Sbjct: 623 HFFHDEFCSVYLEGIKP--IVNGDDAAAKEVVAAVLYECIESTMRMLHPFMPYVTEELWQ 680
Query: 2377 YLP 2385
+LP
Sbjct: 681 HLP 683
>gi|3122908|sp|O27552|SYL_METTH LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA
LIGASE) (LEURS) >gi|2622626 (AE000911) leucyl-tRNA
synthetase [Methanobacterium thermoautotrophicum]
Length = 937
Score = 86.2 bits (210), Expect = 1e-15
Identities = 161/767 (20%), Positives = 289/767 (36%), Gaps = 81/767 (10%)
Frame = +1
Query: 91 ERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDA 270
+RW + +A R L PY +G +H+GH + D+ + K + G++
Sbjct: 9 DRWRDAGIF---QADPDDREKIFLTVAYPYPSGAMHIGHGRTYTVPDVYARFKRMQGYNV 65
Query: 271 PYIPGWDCHGLPIEIAIEKK-----------YGKVGVTLDAVQFRQKCREYAAEQIQLQR 417
+ W G P+ I I ++ Y +V + R EY E +
Sbjct: 66 LFPMAWHVTGAPV-IGIARRIQRKDPWTLKIYREVHRVPEDELERFSDPEYIVEYFSREY 124
Query: 418 RD-FKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAE 594
R + +G DW +KT D + + K+ D G + +G PV +C +C + + +
Sbjct: 125 RSVMEDMGYSIDWRREFKTTDPTYSRFIQWQIRKLRDLGLVRKGAHPVKYCPECENPVGD 184
Query: 595 AEIEYTD--KTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASLAIS 768
++ + + + + + D +AA F P + A +W
Sbjct: 185 HDLLEGEGVAINQLTLLKFKLGDSYLVAATFR---PETIYGATNLW-------------- 227
Query: 769 VGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHP 948
+ P DYV VE +G W + +L + G + + +P
Sbjct: 228 LNPDEDYVRVE----TGGEEWIISRAAVDNLSHQK---LDLKVSGDVNPGDLIGMCVENP 280
Query: 949 FYPDRTIPLLLGNHVSAEDGTGAVHTAPGHG----------QEDHQVFQQYGL------- 1077
+ P+L + V E TG V + P H + DH++ ++YGL
Sbjct: 281 -VTGQEHPILPASFVDPEYATGVVFSVPAHAPADFIALEDLRTDHELLERYGLEDVVADI 339
Query: 1078 ----------LNHYSAAELNPVDARGVYLPTTPPFSELT-------------------LA 1170
+ AAE+ ++ GV P + T
Sbjct: 340 EPVNVIAVDGYGEFPAAEV--IEKFGVRNQEDPRLEDATGELYKIEHARGVMSSHIPVYG 397
Query: 1171 GLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWFISMEQAALRS 1350
G+ + +A +I D E C +V QWF+ A +
Sbjct: 398 GMKVSEAREVIADELKDQGLADEMYEFAERPVICRCGGRCVVRVMEDQWFMKYSDDAWKD 457
Query: 1351 AALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAAL 1530
A + + + P+ +A I+ DW SR+ G +P + R P S
Sbjct: 458 LAHRCLDGMKIIPEEVRANFEYYIDWLNDWACSRRIGLGTRLP-WDERWIIEPLTDSTIY 516
Query: 1531 MR--QVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILD-VWFDSGITHEAVLLERG 1701
M +A R+ E D E + D ++ D T E + E
Sbjct: 517 MAYYTIAHRLR------------------EMDAGEMDDEFFDAIFLDDSGTFEDLREEFR 558
Query: 1702 LPKPADLYLEGAD-----------------QHRGWFQSSLLTGVAMDNAAPYKQCLTHGF 1830
P D L D GW + +++ G+ +
Sbjct: 559 YWYPLDWRLSAKDLIGNHLTFHIFHHSAIFPESGWPRGAVVFGMGL-------------- 604
Query: 1831 TVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWI-ASTDYSNEMSLSQEILKRTTDAYR 2007
G KMS S GN I +D I+ GAD++RL++ +S + + + + T
Sbjct: 605 ---LEGNKMSSSKGNVILLRDAIEKHGADVVRLFLMSSAEPWQDFDWRESEVIGTRRRIE 661
Query: 2008 RIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQ 2187
R + G L G + P + RW++ + + + A + + VQ
Sbjct: 662 WFREFGERVSGILDGRPVLSEVTPAEPESFIGRWMMGQLNQRIREATRALESFQTRKAVQ 721
Query: 2188 TILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADE 2367
L D+ Y R + ++ + ++ A++R +AP + +TA+E
Sbjct: 722 EALYLLKKDVDH----------YLKRVEGRVDDEVKSVLANVLHAWIRLMAPFIPYTAEE 771
Query: 2368 LWSYLPGD 2391
+W G+
Sbjct: 772 MWERYGGE 779
>gi|6015883|emb|CAB57710.1| (Y18930) isoleucyl-trna synthetase
[Sulfolobus solfataricus]
Length = 944
Score = 83.9 bits (204), Expect = 6e-15
Identities = 161/760 (21%), Positives = 301/760 (39%), Gaps = 84/760 (11%)
Frame = +1
Query: 94 RWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAP 273
RWE D Y +K P F PY N H+GH + DI+ + K + G++
Sbjct: 11 RWEEDKIYESNPNPSK--PKFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVL 68
Query: 274 YIPGWDCHGLPI-----------EIAIEKKYGKVGVTLDAVQFRQK---CREYAAEQIQL 411
+ + G PI + IE ++ D + Y E I+
Sbjct: 69 FPMAFHYTGTPIMAMADAIAKGDKELIETFKDIYEISPDVIPRMSDPLFMANYFKEDIKA 128
Query: 412 QRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWC----FDCG 579
R+ +G+ DW + T+D F + K+ KG++++ T PV WC G
Sbjct: 129 SMRE---IGLGIDWRREFTTIDPEFSSFVTWQFHKLQSKGYIVKDTHPVGWCPVHHIPVG 185
Query: 580 SALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLPASL 759
+ ++E P + L FN+ + P T P T+ +
Sbjct: 186 MHDTKGDVE-------------PEIGEFVLI-YFNSE-----KGIFPAATLRPETIFGAT 226
Query: 760 AISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHIL 939
A+ + P+ YV+ + G++ + I ++ I KG+ + +
Sbjct: 227 ALWINPSEMYVVA---SMLGKKM----ILSEKAAAKLSFQIDDIEIEEKIKGSKLVGLKV 279
Query: 940 AHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVD- 1116
+P + I +L + V GTG V + P H D+ ++ N+ + V+
Sbjct: 280 ENPI-TGKHIAVLGADFVDVSLGTGVVMSVPAHAPFDYYYSKKTFKNNNIEIIPVITVEG 338
Query: 1117 -----ARGVYLPTTPPFSE-----------------------------------LTLAGL 1176
A+ V P E +L GL
Sbjct: 339 LGNALAKDVVEKNNPKSDEDLKKLTEYVYRTEYNKGVLRSDLGNLIREEYRNELKSLGGL 398
Query: 1177 HIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATP-QWFISMEQAALRSA 1353
+ K LI + E+ + +C R T IV + QWF+ +
Sbjct: 399 PVPKGRELITNFLISKGLGRKIFEVMNKPVYC-RCGTEIVVKILKDQWFLDYSNKEWKEL 457
Query: 1354 ALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIP------------------ 1479
A K+++ + P+ + IE +R R G P+P
Sbjct: 458 ARKSLSKINVIPEESRKDFEFTIEWLEKRACARTRGLGTPLPWDKKWIIESLSDSTIYMA 517
Query: 1480 LFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQ-TELLGTEADQYEKITDILDVW 1656
+ H + S + + Q G+ +L++ +E G ++ ++ + W
Sbjct: 518 YYTISHKIKQYKLSPSKLTQEFWDYVMLGIG---NLEEISEKTGIPSNIIKEFREEFLYW 574
Query: 1657 FDSGITHEAVLLERGLPKPADLYLEGADQHRGWFQSSLLT-GVAMDNAAPYKQCLTHGFT 1833
+ I H L +P ++ H FQ +L +A++ Y+
Sbjct: 575 YPLDIRHSGKDL---IPNHLTFFIFN---HAAIFQENLWPKAIAVNGLVLYE-------- 620
Query: 1834 VDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIAST-DYSNEMSLSQEILKRTTDAYRR 2010
G+KMSKSL N I + +K G D++R+ ++ST D ++++ S+ ++K + R+
Sbjct: 621 ----GKKMSKSLRNIIPLRKGLKMYGVDVMRIAVSSTADMGSDVNFSESLVKTVGETLRK 676
Query: 2011 IRNTARFL---LGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEI 2181
+ + L G++ GF ++W++ R +E+ + + +
Sbjct: 677 MYELFKSLDNYTGDILGFP--------------EKWLLSRIYEITSSTTRHMEALELRDA 722
Query: 2182 VQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTA 2361
V +L S DL + V+ A GR + + + +++ I P A
Sbjct: 723 VNELLFVFSSDLDEYFGMVS----------AEGREANNKVLREVLTIWLKLITPFAPHLA 772
Query: 2362 DELW 2373
+E+W
Sbjct: 773 EEIW 776
>gi|757839|emb|CAA25352| (X00776) isoleucyl-tRNA-synthetase (1 is 3rd
base in codon) [Escherichia coli]
Length = 145
Score = 80.4 bits (195), Expect = 7e-14
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Frame = +1
Query: 2473 FDKLLTLRDHVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDV 2652
+D+LL +R V KV+E RA+ +G + L +ELRF+ ++
Sbjct: 16 WDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALGDELRFVLLTSGA 75
Query: 2653 TVTPANT-----------DGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRCVTNV 2799
TV N G V+ KC RCWHY D+G H E+CGRCV+NV
Sbjct: 76 TVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNV 135
Query: 2800 DGPGEQR 2820
G GE+R
Sbjct: 136 AGDGEKR 142
>gi|146669 (K01990) isoleucyl-tRNA synthetase (ileS) [Escherichia
coli]
Length = 144
Score = 80.4 bits (195), Expect = 7e-14
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Frame = +1
Query: 2473 FDKLLTLRDHVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDV 2652
+D+LL +R V KV+E RA+ +G + L +ELRF+ ++
Sbjct: 15 WDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALGDELRFVLLTSGA 74
Query: 2653 TVTPANT-----------DGFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRCVTNV 2799
TV N G V+ KC RCWHY D+G H E+CGRCV+NV
Sbjct: 75 TVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNV 134
Query: 2800 DGPGEQR 2820
G GE+R
Sbjct: 135 AGDGEKR 141
>gi|6630988|gb|AAF19639.1|AF201388_1 (AF201388) isoleucyl-tRNA
synthetase [Klebsiella pneumoniae]
Length = 146
Score = 80.0 bits (194), Expect = 9e-14
Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Frame = +1
Query: 2473 FDKLLTLRDHVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELRFLFISGDV 2652
+D+LL +R V KV E RA+ +G + L +ELRF+ ++
Sbjct: 17 WDELLKVRGEVNKVYEQARADKKVGGSLEAAVTLYAVADLAAKLNALGDELRFVLLTSGA 76
Query: 2653 TVTP---ANTD--------GFFVSAQPTTKAKCARCWHYRADIGAHPTHPELCGRCVTNV 2799
V A+ D G V+ KC RCWHY DIG H E+CGRCV+NV
Sbjct: 77 NVADYASASADAQQSELLKGLKVALSKAEGEKCPRCWHYTTDIGKVAEHAEICGRCVSNV 136
Query: 2800 DGPGEQR 2820
G GEQR
Sbjct: 137 AGDGEQR 143
>gi|530444|emb|CAA83769| (Z33122) Val-tRNA synthetase [Mycoplasma
capricolum]
Length = 260
Score = 78.8 bits (191), Expect = 2e-13
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Frame = +1
Query: 1801 PYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLW-IASTDYSNEMSLSQE 1977
P+K L HG D+ RKMSKSLGNGI+P D+I G D LRL+ + ++ ++ S E
Sbjct: 44 PFKDVLIHGLVRDELNRKMSKSLGNGIDPMDVINNNGCDSLRLFLLTNSTPGQDIRYSNE 103
Query: 1978 ILKRTTDAYRRIRNTARFLLGNLHG---FDPTLHLVPLSDMIALDRWIVHRAFELQQTIK 2148
+ + + ++ N +R++ NL FDP + +D+ ++WI+ + + Q +
Sbjct: 104 KILASWNFINKLWNASRYVFLNLDDHFEFDPNFY---KTDLEITNQWILTQLSKTQAYVY 160
Query: 2149 AAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFV 2328
+Y+F+ + +F S Y++ +K + D ++ QT Y L +
Sbjct: 161 EKMNKYEFSLAGNHLWDFVWNKYCSWYIEFSK---VNLSNDKFNYQTKQTLFYVLKEILI 217
Query: 2329 RWIAPILSFTADELW 2373
+ P++ F ++E++
Sbjct: 218 -MLHPLIPFVSEEIY 231
>gi|1174550|sp|P46216|SYV_TRIVA VALYL-TRNA SYNTHETASE (VALINE--TRNA
LIGASE) (VALRS) >gi|598414 (L37098) valyl-tRNA synthetase
[Trichomonas vaginalis]
Length = 489
Score = 76.5 bits (185), Expect = 1e-12
Identities = 115/475 (24%), Positives = 180/475 (37%), Gaps = 38/475 (8%)
Frame = +1
Query: 451 WDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEY---TDKT 621
W Y TLD + I A K+ D+G + R + V+W +A+++AE+EY T +T
Sbjct: 59 WKDTYYTLDEKLSESVIAAFIKLFDEGLIYRSERLVNWDCALKTAISDAEVEYITLTKRT 118
Query: 622 SPMV-DVAYPALDPSALAAVFNATLPPDVQLA---VPIWTTTPWTLPASLAISVGPTLDY 789
V + YP +A + D + V I TT T+ A+++ P
Sbjct: 119 KLNVPNHKYPQYPFGVMAHFYYEICDKDGKKTGEKVEIATTRLETMLGDTAVAINPK--- 175
Query: 790 VLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTI 969
RY +HG + ++P R +
Sbjct: 176 -------------------------DARYNH----LHGM------------YVWHPIREV 194
Query: 970 PLLLGNH---VSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAAELNPVDARGVYLPT 1140
P+ + V GTG V PGH D++V+++ H ++ + G P
Sbjct: 195 PIPIIQDEILVDMNFGTGVVKVTPGHDPNDYEVYKR-----HPEIGLISILTPDGAIAPG 249
Query: 1141 TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
FS G+ + A +V + R + TPQWF
Sbjct: 250 YGQFS-----GMMRFDARVEMVKWMKEHGLYKEEKDHEMRLGITQRGHDIVEQVITPQWF 304
Query: 1321 ISMEQAALRSAALKAITHVTWYPQWGQARIL---------SMIENRPDWTISRQRTWGVP 1473
++ A R A+KA+ G+ +I+ EN W ISRQ WG+
Sbjct: 305 VNTTDMAAR--AIKAVDD-------GELKIVPDEFVVDWKKWHENIRPWCISRQLMWGLR 355
Query: 1474 IPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWY---SLDQTELLGTEADQY------ 1626
IP + R D +G W S ++ G +A+
Sbjct: 356 IPAY----------------RVQIDGKWAEGNGEWVAAASQEEAIAKGAKANNVVPSRVT 399
Query: 1627 -EKITDILDVWFDSGITHEAVLLERGLPK---------PADLYLEGADQHRGWFQSSLLT 1776
E+ D+LD WF S + + + G P P + G D W ++
Sbjct: 400 VEQDPDVLDTWFSSALLPFSGV---GWPSNEERLNRYFPNSILETGWDILTFWVSRMVMM 456
Query: 1777 GVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGN 1875
+ + N P+ L H D GRKMSKS GN
Sbjct: 457 SLTLTNKVPFHTILLHPLVRDAQGRKMSKSFGN 489
>gi|3219292|dbj|BAA28840| (AB008526) Valyl tRNA Synthetase
[Trichomonas vaginalis]
Length = 455
Score = 76.1 bits (184), Expect = 1e-12
Identities = 82/348 (23%), Positives = 143/348 (40%), Gaps = 15/348 (4%)
Frame = +1
Query: 28 HLP-ATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLG 204
H P T F + K E A WE +F+ A K F++ PP G++HLG
Sbjct: 42 HKPDTTQFDSEYNPMKVENAWYSWWENQNFFEPKAADKK----FVMILPPPNVTGELHLG 97
Query: 205 HAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKK-YGKVGV---TLDAVQFR 372
HA+ ++D I + + G ++ ++PG D G+ + +EKK Y + + F
Sbjct: 98 HALTASIEDAITRYHRMCGEESLWVPGTDHAGIATQFRVEKKIYDEKKLHRGEYSREYFL 157
Query: 373 QKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTK 552
++ ++ + + +G W Y TLD + I A K+ D+G + R +
Sbjct: 158 EEAHKWVESKSGTILSQLRDMGSSLAWKDTYYTLDEKRSESVIAAFIKLFDEGLIYRSER 217
Query: 553 PVHWCFDCGSALAEAEIEY---TDKTSPMV-DVAYPALDPSALAAVFNATLPPDVQLA-- 714
V+W +A+++AE+EY T +T V + YP + + D +
Sbjct: 218 LVNWDCALKTAISDAEVEYITLTKRTKLNVPNHKYPQYPFGVMTHFYYEICDKDGKKTGE 277
Query: 715 -VPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAEL 891
V I TT T+ A+++ P RY
Sbjct: 278 KVEIATTRLETMLGDTAVAINP----------------------------KDARYN---- 305
Query: 892 LIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNH---VSAEDGTGAVHTAPGHGQEDHQVF 1062
+HG + ++P R +P+ + V GTG V PGH D++V+
Sbjct: 306 HLHG------------MYVWHPIREVPIPIIQDEILVDMNFGTGVVKVTPGHDPNDYEVY 353
Query: 1063 QQY 1071
+++
Sbjct: 354 KRH 356
>gi|3219294|dbj|BAA28841| (AB008527) Valyl tRNA Synthetase
[Trichomonas vaginalis]
Length = 455
Score = 76.1 bits (184), Expect = 1e-12
Identities = 82/348 (23%), Positives = 143/348 (40%), Gaps = 15/348 (4%)
Frame = +1
Query: 28 HLP-ATDFPMRGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLG 204
H P T F + K E A WE +F+ A K F++ PP G++HLG
Sbjct: 42 HKPDTTQFDSEYNPMKVENAWYSWWENQNFFEPKAADKK----FVMILPPPNVTGELHLG 97
Query: 205 HAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKK-YGKVGV---TLDAVQFR 372
HA+ ++D I + + G ++ ++PG D G+ + +EKK Y + + F
Sbjct: 98 HALTASIEDAITRYHRMCGEESLWVPGTDHAGIATQFRVEKKIYDEKKLHRGEYSREYFL 157
Query: 373 QKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTK 552
++ ++ + + +G W Y TLD + I A K+ D+G + R +
Sbjct: 158 EEAHKWVESKSGTILSQLRDMGSSLAWKDTYYTLDEKRSESVIAAFIKLFDEGLIYRSER 217
Query: 553 PVHWCFDCGSALAEAEIEY---TDKTSPMV-DVAYPALDPSALAAVFNATLPPDVQLA-- 714
V+W +A+++AE+EY T +T V + YP + + D +
Sbjct: 218 LVNWDCALKTAISDAEVEYITLTKRTKLNVPNHKYPQYPFGVMTHFYYEICDKDGKKTGE 277
Query: 715 -VPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAEL 891
V I TT T+ A+++ P RY
Sbjct: 278 KVEIATTRLETMLGDTAVAINP----------------------------KDARYN---- 305
Query: 892 LIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNH---VSAEDGTGAVHTAPGHGQEDHQVF 1062
+HG + ++P R +P+ + V GTG V PGH D++V+
Sbjct: 306 HLHG------------MYVWHPIREVPIPIIQDEILVDMNFGTGVVKVTPGHDPNDYEVY 353
Query: 1063 QQY 1071
+++
Sbjct: 354 KRH 356
>gi|1373154 (U48870) IleS [Bacillus subtilis]
Length = 189
Score = 71.8 bits (173), Expect = 3e-11
Identities = 54/169 (31%), Positives = 71/169 (41%), Gaps = 8/169 (4%)
Frame = +1
Query: 2269 DAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLPGDHADNVLFTTWYDGXXXXXX 2448
D P RRS QT Y A V+ APIL TADELWS+L +V T +
Sbjct: 1 DHPDRRSMQTVFYETLLALVKLSAPILPHTADELWSHLTFVEEQSVQLTDMPE--TITVP 58
Query: 2449 XXXXXXXDFDKLLTLRDHVTKVLEPMRANGVIGXXXXXXXXXXXXXXXXXRWQPLTEELR 2628
FD+ + LRD V K LE R +IG + E L
Sbjct: 59 NSEATEEKFDRFMALRDDVLKALETARNEKIIGKSLEANLKLYPNKENKELLASIKENLS 118
Query: 2629 FLFISGDVTVT-----PANTDGFFVSAQPTTKAKCARCWHYRA---DIGAHPTHPEL 2775
LFI ++T++ P + F KA+ C R D+GA+P +P L
Sbjct: 119 QLFIVSELTISEENEAPNDAQSFATGKIAVEKAEGEMCERSRVISKDVGANPKYPTL 175
>gi|68521|pir||SYECL leucine--tRNA ligase (EC 6.1.1.4) - Escherichia
coli >gi|41916|emb|CAA29642| (X06331) leucyl-tRNA
synthetase [Escherichia coli]
Length = 860
Score = 68.3 bits (164), Expect = 3e-10
Identities = 77/301 (25%), Positives = 116/301 (37%), Gaps = 39/301 (12%)
Frame = +1
Query: 175 PYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTL 354
PY +G++H+GH N + D+I + +H+ G + GWD GLP E A
Sbjct: 42 PYPSGRLHMGHVRNYTIGDVIARYQHMLGKNVLQPIGWDAFGLPAEGA------------ 89
Query: 355 DAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGH 534
AV+ + + I + K LG DW T + E + ++ KG
Sbjct: 90 -AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGL 148
Query: 535 LIRGTKPVHW-----------------CFDCGSALAEAEI-EYTDKTSPMVDVAYPALDP 660
+ + T V+W C+ C + + EI ++ K + D LD
Sbjct: 149 VYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKINAYADELLNDLDK 208
Query: 661 -------------------SALAAVFNATLPPDVQLAVPIWTTTPWTLPAS--LAISVGP 777
+ FN D + ++TT P T LA+ G
Sbjct: 209 LDHWPDTVKTMQRNWIGRSEGVEITFNVN---DYDNTLTVYTTRPDTFMGCTYLAVRAGH 265
Query: 778 TLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYP 957
L E +AE + K HP
Sbjct: 266 PLAQKAAENNPE----------LAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTG 315
Query: 958 DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL 1077
+ IP+ N V E GTGAV PGH Q D++ +YGL
Sbjct: 316 EE-IPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGL 354
Score = 40.6 bits (93), Expect = 0.064
Identities = 55/167 (32%), Positives = 84/167 (49%), Gaps = 64/167 (38%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLD----QTEL 1602
DW +SRQR WG PIP+ L + + V G+ D +T +
Sbjct: 419 DWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTV 478
Query: 1603 LGTEADQYEKITDILDVWFDSG---ITHEAVLLERGLPK--------PADLYLEGADQ-- 1743
G A + TD D + +S + + G+ P D+Y+ G +
Sbjct: 479 NGMPA---LRETDTFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAI 535
Query: 1744 -HRGWFQ--SSLLTGVAMDNA-APYKQCLTHGFTV------------------------- 1836
H +F+ L+ M N+ P KQ L G +
Sbjct: 536 MHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVER 595
Query: 1837 DQHGR------------------KMSKSLGNGIEPQDIIKTLGADILRLWI 1935
D+ GR KMSKS NGI+PQ +++ GAD +RL++
Sbjct: 596 DEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFM 646
>gi|6226188|sp|Q9ZDB1|SYL_RICPR LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA
LIGASE) (LEURS) >gi|3860978|emb|CAA14878| (AJ235271)
LEUCYL-TRNA SYNTHETASE (leuS) [Rickettsia prowazekii]
Length = 828
Score = 67.5 bits (162), Expect = 5e-10
Identities = 62/310 (20%), Positives = 133/310 (42%), Gaps = 38/310 (12%)
Frame = +1
Query: 130 AHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPI 309
++ +P + + + PY +G+IH+GH N + D+I + + GF+ + GWD GLP
Sbjct: 21 SNESSKPKYYVLEMLPYPSGKIHIGHVRNYSIGDVIARFMTMQGFNVLHPMGWDAFGLPA 80
Query: 310 EIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFE 489
E A A++ + +++ I+ ++ + +G DW + D +
Sbjct: 81 ENA-------------AIKNNSRPQDWTYSNIEYMKKQLQSMGFAYDWTREINSCDPEYY 127
Query: 490 ADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI---------------------- 603
E + ++ D+ + + V+W + LA ++
Sbjct: 128 KHEQKFFLELYDRNLVYQKESLVNWDPVDNTVLANEQVVDGRGWRSGAIIEKRYLKQWFL 187
Query: 604 EYTDKTSPMVDVAYPALD-PSALAAV------------FNATLPPDVQLAVPIWTTTPWT 744
+ TD +++ D P+A+ + F+ + + +++T P T
Sbjct: 188 KITDYAEELLNEIQNLKDWPAAVRVMQEEWIGKSTGVNFHFKVKYHENTTIEVFSTKPET 247
Query: 745 LPASLAISVG---PTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKG 915
+ + I + P ++ ++ + P Y I + K
Sbjct: 248 IFGASFIGIAFNHPIIEQLICKTP------------EIVNFITKCSYITRSSEIDKAEKE 295
Query: 916 AAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQV 1059
+ HPF + +P+++ N V + GTGA+ P H + DH++
Sbjct: 296 GIFSGLYVIHPFDANIFLPVIITNFVLMDYGTGAIFGCPAHDKRDHEL 343
Score = 33.6 bits (75), Expect = 8.2
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPL 1482
DW+ISRQR WG PIP+
Sbjct: 403 DWSISRQRFWGCPIPM 418
>gi|406914 (U02254) unknown [Mycoplasma genitalium]
Length = 107
Score = 66.3 bits (159), Expect = 1e-09
Identities = 38/98 (38%), Positives = 60/98 (60%), Gaps = 4/98 (4%)
Frame = +1
Query: 1909 GADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIRNT-ARFLLGNLHGFDPTL---HLV 2076
GADILRLW+A+TD+ + + ILK+ + YRRIRN+ RF+LGN++GF+ T +
Sbjct: 5 GADILRLWVANTDWQIDNKIGVNILKQVAEQYRRIRNSLLRFILGNINGFNFTSMDDYKF 64
Query: 2077 PLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNF 2202
L D I ++H+ L + I+ +Y+F ++ I F
Sbjct: 65 SLEDKI-----VIHKTNSLVEQIEKFLEKYNFLGCLKVINKF 101
>gi|2129086|pir||A64379 isoleucine--tRNA ligase (EC 6.1.1.5) -
Methanococcus jannaschii
Length = 942
Score = 66.3 bits (159), Expect = 1e-09
Identities = 77/357 (21%), Positives = 139/357 (38%), Gaps = 14/357 (3%)
Frame = +1
Query: 61 DLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
D + E +RWE + A+ R F + PY NG +H GH + +++
Sbjct: 6 DFKEIEKKWQKRWEEAKIF---EANPDDREKFFITAAFPYLNGVLHAGHLRTFTIPEVVA 62
Query: 241 KSKHLDGFDAPYIPGWDCHGLPI----EI----------AIEKKYGKVGVTLDAVQFRQK 378
+ + + + + G+ G PI E+ A + +G L + +K
Sbjct: 63 RFQRMKNKNVLWTFGYHVTGTPILGLAELIKNRDEKTIWAYTELHGIPKEELLELTTPEK 122
Query: 379 CREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPV 558
EY +++ + FKR+G DW +KT D F K+ +KG +++G+ PV
Sbjct: 123 IVEYFSKKAE---EAFKRMGFSLDWRRNFKTDDKVFNKFIEWQFHKLKEKGLIVKGSHPV 179
Query: 559 HWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTP 738
+C C + + + +I + + +V+ + ATL P+ V T
Sbjct: 180 RYCPRCDNPVEDHDI-LVGENATLVEYILIKFTTEDGCIMPMATLRPETVFGV----TNV 234
Query: 739 WTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGA 918
W P + + L+ G W ++ ++ I KG
Sbjct: 235 WVNPEATYVKAKVYLEKETENGIXLIENGIWIMAKECAEKL---KHQDRKIEIIEEFKGE 291
Query: 919 AMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAA 1098
+ + +P + +P+L V GTG V + P H D+ + GL++
Sbjct: 292 QLINKKVKNPV-TGKEVPILPAKFVKTNIGTGCVMSVPAHAPYDYIALRDLGLVDEIGLI 350
Query: 1099 ELNPVDARGVY 1131
L V G Y
Sbjct: 351 PLINVPGYGKY 361
>gi|2507435|sp|P07813|SYL_ECOLI LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA
LIGASE) (LEURS) >gi|1651269|dbj|BAA35289| (D90704)
Leucine-tRNA ligase (EC 6.1.1.4). [Escherichia coli]
>gi|1786861 (AE000168) leucine tRNA synthetase
[Escherichia coli]
Length = 860
Score = 66.0 bits (158), Expect = 2e-09
Identities = 76/301 (25%), Positives = 116/301 (38%), Gaps = 39/301 (12%)
Frame = +1
Query: 175 PYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTL 354
PY +G++H+GH N + D+I + + + G + GWD GLP E A
Sbjct: 42 PYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA------------ 89
Query: 355 DAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGH 534
AV+ + + I + K LG DW T + E + ++ KG
Sbjct: 90 -AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGL 148
Query: 535 LIRGTKPVHWC-----------------FDCGSALAEAEI-EYTDKTSPMVDVAYPALDP 660
+ + T V+WC + C + + EI ++ K + D LD
Sbjct: 149 VYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDK 208
Query: 661 -------------------SALAAVFNATLPPDVQLAVPIWTTTPWTLPAS--LAISVGP 777
+ FN D + ++TT P T LA++ G
Sbjct: 209 LDHWPDTVKTMQRNWIGRSEGVEITFNVN---DYDNTLTVYTTRPDTFMGCTYLAVAAGH 265
Query: 778 TLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYP 957
L E +AE + K HP
Sbjct: 266 PLAQKAAENNPE----------LAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTG 315
Query: 958 DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL 1077
+ IP+ N V E GTGAV PGH Q D++ +YGL
Sbjct: 316 EE-IPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGL 354
Score = 40.6 bits (93), Expect = 0.064
Identities = 55/167 (32%), Positives = 84/167 (49%), Gaps = 64/167 (38%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLD----QTEL 1602
DW +SRQR WG PIP+ L + + V G+ D +T +
Sbjct: 419 DWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTV 478
Query: 1603 LGTEADQYEKITDILDVWFDSG---ITHEAVLLERGLPK--------PADLYLEGADQ-- 1743
G A + TD D + +S + + G+ P D+Y+ G +
Sbjct: 479 NGMPA---LRETDTFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAI 535
Query: 1744 -HRGWFQ--SSLLTGVAMDNA-APYKQCLTHGFTV------------------------- 1836
H +F+ L+ M N+ P KQ L G +
Sbjct: 536 MHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVER 595
Query: 1837 DQHGR------------------KMSKSLGNGIEPQDIIKTLGADILRLWI 1935
D+ GR KMSKS NGI+PQ +++ GAD +RL++
Sbjct: 596 DEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFM 646
>gi|3915868|sp|Q58050|SYL_METJA LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA
LIGASE) (LEURS) >gi|2826301 (U67511) leucyl-tRNA
synthetase (leuS) [Methanococcus jannaschii]
Length = 942
Score = 66.0 bits (158), Expect = 2e-09
Identities = 77/357 (21%), Positives = 139/357 (38%), Gaps = 14/357 (3%)
Frame = +1
Query: 61 DLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
D + E +RWE + A+ R F + PY NG +H GH + +++
Sbjct: 6 DFKEIEKKWQKRWEEAKIF---EANPDDREKFFITAAFPYLNGVLHAGHLRTFTIPEVVA 62
Query: 241 KSKHLDGFDAPYIPGWDCHGLPI----EI----------AIEKKYGKVGVTLDAVQFRQK 378
+ + + + + G+ G PI E+ A + +G L + +K
Sbjct: 63 RFQRMKNKNVLWTFGYHVTGTPILGLAELIKNRDEKTIWAYTELHGIPKEELLELTTPEK 122
Query: 379 CREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPV 558
EY +++ + FKR+G DW +KT D F K+ +KG +++G+ PV
Sbjct: 123 IVEYFSKKAE---EAFKRMGFSLDWRRNFKTDDKVFNKFIEWQFHKLKEKGLIVKGSHPV 179
Query: 559 HWCFDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTP 738
+C C + + + +I + + +V+ + ATL P+ V T
Sbjct: 180 RYCPRCDNPVEDHDI-LVGENATLVEYILIKFTTEDGCIMPMATLRPETVFGV----TNV 234
Query: 739 WTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGA 918
W P + + L+ G W ++ ++ I KG
Sbjct: 235 WVNPEATYVKAKVYLEKETENGIELIENGIWIMAKECAEKL---KHQDRKIEIIEEFKGE 291
Query: 919 AMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHYSAA 1098
+ + +P + +P+L V GTG V + P H D+ + GL++
Sbjct: 292 QLINKKVKNPV-TGKEVPILPAKFVKTNIGTGCVMSVPAHAPYDYIALRDLGLVDEIGLI 350
Query: 1099 ELNPVDARGVY 1131
L V G Y
Sbjct: 351 PLINVPGYGKY 361
>gi|1778560 (U82598) leucine tRNA synthetase [Escherichia coli]
Length = 907
Score = 65.2 bits (156), Expect = 3e-09
Identities = 76/301 (25%), Positives = 115/301 (37%), Gaps = 39/301 (12%)
Frame = +1
Query: 175 PYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTL 354
PY +G++H+GH N + D+I + + + G + GWD GLP E A
Sbjct: 89 PYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGA------------ 136
Query: 355 DAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGH 534
AV+ + + I + K LG DW T + E + ++ KG
Sbjct: 137 -AVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGL 195
Query: 535 LIRGTKPVHW-----------------CFDCGSALAEAEI-EYTDKTSPMVDVAYPALDP 660
+ + T V+W C+ C + + EI ++ K + D LD
Sbjct: 196 VYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDK 255
Query: 661 -------------------SALAAVFNATLPPDVQLAVPIWTTTPWTLPAS--LAISVGP 777
+ FN D + ++TT P T LA+ G
Sbjct: 256 LDHWPDTVKTMQRNWIGRSEGVEITFNVN---DYDNTLTVYTTRPDTFMGCTYLAVRAGH 312
Query: 778 TLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYP 957
L E +AE + K HP
Sbjct: 313 PLAQKAAENNPE----------LAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTG 362
Query: 958 DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL 1077
+ IP+ N V E GTGAV PGH Q D++ +YGL
Sbjct: 363 EE-IPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGL 401
Score = 40.6 bits (93), Expect = 0.064
Identities = 55/167 (32%), Positives = 84/167 (49%), Gaps = 64/167 (38%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLD----QTEL 1602
DW +SRQR WG PIP+ L + + V G+ D +T +
Sbjct: 466 DWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTV 525
Query: 1603 LGTEADQYEKITDILDVWFDSG---ITHEAVLLERGLPK--------PADLYLEGADQ-- 1743
G A + TD D + +S + + G+ P D+Y+ G +
Sbjct: 526 NGMPA---LRETDTFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAI 582
Query: 1744 -HRGWFQ--SSLLTGVAMDNA-APYKQCLTHGFTV------------------------- 1836
H +F+ L+ M N+ P KQ L G +
Sbjct: 583 MHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVER 642
Query: 1837 DQHGR------------------KMSKSLGNGIEPQDIIKTLGADILRLWI 1935
D+ GR KMSKS NGI+PQ +++ GAD +RL++
Sbjct: 643 DEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFM 693
>gi|1174531|sp|P43827|SYL_HAEIN LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA
LIGASE) (LEURS) >gi|1074962|pir||H64102 leucine--tRNA
ligase (EC 6.1.1.4) - Haemophilus influenzae (strain Rd
KW20) >gi|1573943 (U32774) leucyl-tRNA synthetase (leuS)
[Haemophilus influenzae Rd]
Length = 861
Score = 65.2 bits (156), Expect = 3e-09
Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 34/334 (10%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
EP + + W + + ++ +K + L PY +G++H+GH N + D+I + + +
Sbjct: 11 EPKVQQYWAENKVFKAIKDESKEKYYCLSMF--PYPSGRLHMGHVRNYTIGDVISRYQRM 68
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRL 435
G + GWD GLP E A A++ + ++ E I ++ + L
Sbjct: 69 LGKNVLQPFGWDAFGLPAEGA-------------AIKNKTAPAKWTYENIAYMKKQLQLL 115
Query: 436 GIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHW----------------- 564
G DWD T + E ++ KG + + T V+W
Sbjct: 116 GFGFDWDREIATCKPEYYKWEQWFFTELYKKGLVYKKTSTVNWCPNDETVLANEQVHEGC 175
Query: 565 CFDCGSALAEAEI--------EYTDK------TSPMVDVAYPALDPSALAAVFNATLPPD 702
C+ C + + + EI +Y ++ T P + + + + D
Sbjct: 176 CWRCDTPVEQKEIPQWFIKITDYAEQLLGGLDTLPQWPDMVKTMQRNWIGRSEGVEITFD 235
Query: 703 VQLA---VPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXR 873
V V ++TT P T + + + +S
Sbjct: 236 VANTNEKVAVYTTRPDTFYGVSYLGIAAAHPLASLAAQNNS---ELAAFIQEAKNAKVAE 292
Query: 874 YGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDH 1053
+A + G A G HP D+ +P+ + N V GTGAV P H Q D
Sbjct: 293 ADLATMEKKGMATGL-----FAIHPLTGDK-LPIWVANFVLMHYGTGAVMAVPAHDQRDF 346
Query: 1054 QVFQQYGL 1077
+ Q+Y L
Sbjct: 347 EFAQKYSL 354
Score = 39.9 bits (91), Expect = 0.11
Identities = 51/167 (30%), Positives = 77/167 (45%), Gaps = 61/167 (36%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTE 1614
DW +SRQR WG PIP+ + L + + V GV + D T
Sbjct: 419 DWGVSRQRYWGAPIPMLTLENGDVVPAPMEDLPIILPEDVVMDGVKSPINADPNWAKTTF 478
Query: 1615 ADQYE-KITDILDVWFDSGITHEAVLL-----------ERGLPKPADLYLEGADQ----- 1743
D K TD D + +S + E P D Y+ G +
Sbjct: 479 NDAPALKETDTFDTFMESSWYYARYTCPQYQNGMLDAEEANYWLPVDQYIGGIEHATMHL 538
Query: 1744 -HRGWFQSSLLTGVAMDNAAPYKQCLTHGFTV-------------------------DQH 1845
+ +F L + + P + L G + D+
Sbjct: 539 LYFRFFHKLLRDAGFVTSEEPADKLLCQGMVLADAFYYTSPTNERIWVSPTQVTLERDEK 598
Query: 1846 GR------------------KMSKSLGNGIEPQDIIKTLGADILRLWI 1935
GR KMSKS NGI+PQ++++ GAD +RL++
Sbjct: 599 GRIIKATDPEGRELVHSGMTKMSKSKNNGIDPQEMVEKYGADTVRLFM 646
>gi|135127|sp|P13502|SYI_ENTAE ISOLEUCYL-TRNA SYNTHETASE
(ISOLEUCINE--TRNA LIGASE) (ILERS) >gi|148357 (M26713)
ileS protein [Enterobacter aerogenes]
Length = 92
Score = 64.8 bits (155), Expect = 3e-09
Identities = 34/70 (48%), Positives = 42/70 (59%), Gaps = 11/70 (15%)
Frame = +1
Query: 2611 LTEELRFLFISGDVTVT-----PANT------DGFFVSAQPTTKAKCARCWHYRADIGAH 2757
L EELRF+ ++ V PA+ G V KC RCWHY +D+G
Sbjct: 9 LGEELRFVLLTSGANVADYAQAPADAWQSDLLKGLKVVLSKAEGEKCPRCWHYTSDVGKV 68
Query: 2758 PTHPELCGRCVTNVDGPGEQR 2820
H E+CGRCV+NV G GEQR
Sbjct: 69 AEHAEICGRCVSNVAGDGEQR 89
>gi|1149664|emb|CAA60232| (X86515) ileS [Clostridium perfringens]
Length = 138
Score = 64.0 bits (153), Expect = 6e-09
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1
Query: 1711 PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQ 1890
PA E DQ RGWF + L A+ N P++ C+ G +D+ G KMSKS GN ++P
Sbjct: 5 PAQFISEAVDQTRGWFYTLLAISTAIFNRNPFENCIVLGHVLDKKGLKMSKSKGNVVDPF 64
Query: 1891 DIIKTLGADILR 1926
+++ + GAD R
Sbjct: 65 EVLDSQGADATR 76
>gi|4980663|gb|AAD35261.1|AE001702_1 (AE001702) leucyl-tRNA
synthetase [Thermotoga maritima]
Length = 824
Score = 63.6 bits (152), Expect = 8e-09
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Frame = +1
Query: 91 ERWERDD-FYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFD 267
E WE FY R+ +P + PY +G +H+GH N ++ DI+ + K + G++
Sbjct: 15 EVWEEKKVFYTPQRSE---KPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYN 71
Query: 268 APYIPGWDCHGLPIE-IAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGII 444
+ G+D GLP E AIEK G+ + E+ + I R+ K+LGI
Sbjct: 72 VLHPFGYDAFGLPAENAAIEK-----GIHPE---------EWTRKNIATIRQQVKKLGIS 117
Query: 445 GDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIE 606
DW T D + ++ G + V+WC C + LA +++
Sbjct: 118 YDWSREIATCDEEYYKWTQWIFLQLYKNGLAYKKKAAVNWCPKCKTVLANEQVK 171
Score = 57.4 bits (136), Expect = 6e-07
Identities = 60/167 (35%), Positives = 87/167 (51%), Gaps = 25/167 (14%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSGA-PHPRSAALMRQVADRVE-----QQGVDIWYSLDQT 1596
DW ISRQR WG PIP+ G P P +R D VE Q + +T
Sbjct: 421 DWLISRQRYWGAPIPIIYCEKCGVVPVPEEDLPVRLPKD-VEFLPTGQSPLSFHEGFKKT 479
Query: 1597 E--LLGTEADQYEKITDILDVWFDSG---ITHEAVLLERGLPKPADL-YLEGADQHRGWF 1758
+ + G EA ++ TD +D + DS + + LE +P D+ Y DQ+ G
Sbjct: 480 KCPVCGGEA---QRETDTMDTFVDSSWYFLRYVNPHLEDKPFEPDDVNYWLPVDQYIGGV 536
Query: 1759 QSSLL--------TGVAMDNA-----APYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDII 1899
+ ++L T V D P+ T G + + G KMSKS GN + P ++I
Sbjct: 537 EHAVLHLLYSRFVTKVLHDLGYLNFDEPFTNLFTQGM-IYKDGAKMSKSKGNVVSPDEMI 595
Query: 1900 KTLGADILRLWI 1935
+ GAD LR++I
Sbjct: 596 EKYGADTLRMYI 607
>gi|6226187|sp|O66680|SYL_AQUAE LEUCYL-TRNA SYNTHETASE
(LEUCINE--TRNA LIGASE) (LEURS) >gi|2983033 (AE000685)
leucyl-tRNA synthetase alpha subunit [Aquifex aeolicus]
Length = 634
Score = 63.2 bits (151), Expect = 1e-08
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Frame = +1
Query: 91 ERWERDD-FYAQLRAHAKGRP-LFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGF 264
+RWE F AQ +G+P F + + PY +G+IH+GH N + D I + + G
Sbjct: 16 KRWEEAGVFKAQ-----EGKPNKFYVLEMFPYPSGRIHMGHVRNYTIGDAIARYLKMRGK 70
Query: 265 DAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGII 444
+ + GWD GLP E A A++ ++ E I ++ K LG
Sbjct: 71 NILHPMGWDAFGLPAENA-------------AIKHGIHPAKWTYENIDYMKKQLKILGFS 117
Query: 445 GDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
DWD T D + K++++G R T V+WC + LA ++
Sbjct: 118 YDWDREIATCDPEYYKWNQWIFLKMLERGIAYRKTAKVNWCPHDQTVLANEQV 170
Score = 34.4 bits (77), Expect = 4.8
Identities = 27/77 (35%), Positives = 37/77 (47%), Gaps = 6/77 (7%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSG-APHPRSAALMRQVAD-RVEQQGVDIWYSLDQTELLG 1608
DW ISRQR WG PIP+ G P P ++ D + QG + S E +
Sbjct: 445 DWNISRQRYWGTPIPVVYCEKCGMVPVPEDQLPVKLPLDVKFTGQGNPLETS---EEFVN 501
Query: 1609 TE----ADQYEKITDILDVWFDS 1665
T + + TD +D +FDS
Sbjct: 502 TTCPKCGGKARRETDTMDTFFDS 524
>gi|5104685|dbj|BAA80000.1| (AP000060) 959aa long hypothetical
leucyl-tRNA synthetase [Aeropyrum pernix]
Length = 959
Score = 62.8 bits (150), Expect = 1e-08
Identities = 107/470 (22%), Positives = 184/470 (38%), Gaps = 66/470 (14%)
Frame = +1
Query: 70 KREPAILERWERDDFYAQL--RAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIK 243
+R A+ E+W+ A+L GR F + PY N HLG A + DI+ +
Sbjct: 2 ERLKAVEEKWQERWREARLFEADPQPGRRKFFITFPYPYVNAYPHLGSAFTILRVDIMAR 61
Query: 244 SKHLDGFDAPYIPGWDCHGLPI----------EIAIEKKYGKVGVTLDAVQFRQKCREYA 393
K + G++ + GW G PI + I K +G+ + + + R +
Sbjct: 62 YKRMRGYNVLFPQGWHATGGPIVSSALRVREGDPRIIKTLRDMGIPEEDIPRFRDPRYWV 121
Query: 394 AEQIQLQRRDFKRLGIIGDWDAPYKT--LDFRFEADEIRALAKIVDKGHLIRGTKPVHWC 567
+ RRD +R G+ DW + T L+ + K+ +KG + +G PV WC
Sbjct: 122 EFFTKAWRRDLERYGMSIDWRREFYTTSLNPAYSRFIEWQYLKLREKGFVGKGRHPVVWC 181
Query: 568 FDCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTL 747
+ + D P Y + P + L P T P T+
Sbjct: 182 -------PKEQKVVGDHDRP---DEYAGISPQEAVII---KFRGRDGLVYPALTYRPETV 228
Query: 748 PASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAME 927
+ V P Y++ E G+ RW + ++I +G +
Sbjct: 229 FGVTNLWVHPDATYLVAE---VDGEERWIIGEQAARELADQGH---RVVILERIEGRRLL 282
Query: 928 QHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDH----------QVFQQYGL 1077
I+ +P R +P+L + V + GTG V + P H D+ + ++YG
Sbjct: 283 GRIVVNP-ADGREVPVLPASFVRPDLGTGVVMSVPAHAPYDYVALMELKRRPETLREYG- 340
Query: 1078 LNHYSAAELNPVDA------------------------------------------RGVY 1131
L L P+ G+
Sbjct: 341 LEPGVVESLEPIQLIAVPRAEGLLVVEEVRRRGVESQMDREKLDEATREVYAREFYEGIM 400
Query: 1132 LPTTPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATP 1311
L TT FS GL + +A +V+ + +C V
Sbjct: 401 LETTGRFS-----GLKVAEAKEKVVEWLEERGAALRIYTLPQEV-YCRCGARTHVKIVED 454
Query: 1312 QWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIP 1479
QWF+ + ++ A +A+ + + P + ++IE DW + + G P+P
Sbjct: 455 QWFLLYSKPEWKALAREAVARMEFLPGHVRRDFEAIIEALRDWAFTHKGELGTPLP 510
>gi|282430|pir||A41882 leucine--tRNA ligase (EC 6.1.1.4) - Bacillus
subtilis >gi|143148 (M88581) transfer RNA-Leu synthetase
[Bacillus subtilis]
Length = 804
Score = 62.5 bits (149), Expect = 2e-08
Identities = 47/169 (27%), Positives = 70/169 (40%), Gaps = 1/169 (0%)
Frame = +1
Query: 97 WERDDFYAQLRAHAKGRPLFLLHDGPPYANGQ-IHLGHAVNKILKDIIIKSKHLDGFDAP 273
W + +A L + K + F D PY +G +H+GH DI+ + K + G+D
Sbjct: 16 WLENKTFATLDNNEKQK--FYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVL 73
Query: 274 YIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDW 453
+ GWD GLP E +Y A+ + + I RR + LG DW
Sbjct: 74 HPMGWDAFGLPAE-----QY--------ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDW 120
Query: 454 DAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
D T D + K+ +KG PV+WC G+ LA E+
Sbjct: 121 DREINTTDPEYYKWTQWIFLKLYEKGLAYVDEVPVNWCPALGTVLANEEV 170
Score = 54.3 bits (128), Expect = 5e-06
Identities = 51/166 (30%), Positives = 80/166 (47%), Gaps = 31/166 (18%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSG---APHPRSAALMRQVADRVEQQG--------VDIWY 1581
DW SRQR WG PIP+ +H G A L+ D ++ G + W
Sbjct: 414 DWLFSRQRYWGEPIPV-IHWEDGTSTAVPEEELPLILPKTDEIKPSGTGESPLANIKEWV 472
Query: 1582 SLDQTELLGTEADQYEKITDILDVWFDSGITHEAVL-------------LERGLPKPADL 1722
+ E + + T+ + W S + LE+ LP D+
Sbjct: 473 EVTDPET----GKKGRRETNTMPQWAGSCWYFLRYIDPHNPDQLASPEKLEKWLP--VDM 526
Query: 1723 YLEGADQH-------RGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGI 1881
Y+ GA+ R W + GV + P+++ G + ++ KMSKS GN +
Sbjct: 527 YIGGAEHAVLHLLYARFWHKFLYDIGV-VPTKEPFQKLYNQGMILGENNEKMSKSKGNVV 585
Query: 1882 EPQDIIKTLGADILRLW 1932
P +I+ + GAD LRL+
Sbjct: 586 NPDEIVASHGADTLRLY 602
Score = 35.2 bits (79), Expect = 2.8
Identities = 14/37 (37%), Positives = 23/37 (61%)
Frame = +1
Query: 967 IPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL 1077
+P+ + ++V A GTGAV PGH + D + + +GL
Sbjct: 318 LPIWIADYVLASYGTGAVMAVPGHDERDFEFAKTFGL 354
>gi|3123286|sp|P36430|SYL_BACSU LEUCYL-TRNA SYNTHETASE
(LEUCINE--TRNA LIGASE) (LEURS) >gi|2293181 (AF008220)
leucine tRNA synthetase [Bacillus subtilis]
>gi|2635516|emb|CAB15010| (Z99119) leucyl-tRNA
synthetase [Bacillus subtilis]
Length = 804
Score = 62.5 bits (149), Expect = 2e-08
Identities = 47/169 (27%), Positives = 70/169 (40%), Gaps = 1/169 (0%)
Frame = +1
Query: 97 WERDDFYAQLRAHAKGRPLFLLHDGPPYANGQ-IHLGHAVNKILKDIIIKSKHLDGFDAP 273
W + +A L + K + F D PY +G +H+GH DI+ + K + G+D
Sbjct: 16 WLENKTFATLDNNEKQK--FYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGYDVL 73
Query: 274 YIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDW 453
+ GWD GLP E +Y A+ + + I RR + LG DW
Sbjct: 74 HPMGWDAFGLPAE-----QY--------ALDTGNDPAVFTKQNIDNFRRQIQALGFSYDW 120
Query: 454 DAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
D T D + K+ +KG PV+WC G+ LA E+
Sbjct: 121 DREINTTDPEYYKWTQWIFLKLYEKGLAYVDEVPVNWCPALGTVLANEEV 170
Score = 54.3 bits (128), Expect = 5e-06
Identities = 51/166 (30%), Positives = 80/166 (47%), Gaps = 31/166 (18%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSG---APHPRSAALMRQVADRVEQQG--------VDIWY 1581
DW SRQR WG PIP+ +H G A L+ D ++ G + W
Sbjct: 414 DWLFSRQRYWGEPIPV-IHWEDGTSTAVPEEELPLILPKTDEIKPSGTGESPLANIKEWV 472
Query: 1582 SLDQTELLGTEADQYEKITDILDVWFDSGITHEAVL-------------LERGLPKPADL 1722
+ E + + T+ + W S + LE+ LP D+
Sbjct: 473 EVTDPET----GKKGRRETNTMPQWAGSCWYFLRYIDPHNPDQLASPEKLEKWLP--VDM 526
Query: 1723 YLEGADQH-------RGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGI 1881
Y+ GA+ R W + GV + P+++ G + ++ KMSKS GN +
Sbjct: 527 YIGGAEHAVLHLLYARFWHKFLYDIGV-VPTKEPFQKLYNQGMILGENNEKMSKSKGNVV 585
Query: 1882 EPQDIIKTLGADILRLW 1932
P +I+ + GAD LRL+
Sbjct: 586 NPDEIVASHGADTLRLY 602
>gi|1931613|gb|AAB51589.1| (U93308) valyl tRNA synthetase
[Arabidopsis thaliana]
Length = 248
Score = 62.1 bits (148), Expect = 2e-08
Identities = 31/84 (36%), Positives = 54/84 (63%), Gaps = 6/84 (7%)
Frame = +1
Query: 79 PAILER-----WERDDFYAQLRAHAKG-RPLFLLHDGPPYANGQIHLGHAVNKILKDIII 240
PA +E+ WE+ D + +A AK +P F++ PP G +H+GHA+ ++D II
Sbjct: 142 PATVEKSWYAWWEKSDLF---KADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTII 198
Query: 241 KSKHLDGFDAPYIPGWDCHGLPIEIAIEKK 330
+ K + G++A ++PG D G+ ++ +EKK
Sbjct: 199 RWKRMSGYNALWVPGVDHAGIATQVVVEKK 228
>gi|3328616|gb|AAC67801.1| (AE001294) Leucyl tRNA Synthetase
[Chlamydia trachomatis]
Length = 819
Score = 61.7 bits (147), Expect = 3e-08
Identities = 77/334 (23%), Positives = 135/334 (40%), Gaps = 41/334 (12%)
Frame = +1
Query: 76 EPAILER-----WERDDFYAQLRAHAKGRPLFLLHDGPPYANGQ-IHLGHAVNKILKDII 237
+P ++E WE + + K + + + D PY +G +H+GH + DI+
Sbjct: 4 DPGLIEEKWQKFWENEQVFKAEEDETKTK--YYVLDMFPYPSGAGLHVGHLIGYTATDIV 61
Query: 238 IKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQR 417
+ K GF + GWD GLP E +Y A++ RE + I +
Sbjct: 62 ARYKRAQGFSVLHPMGWDSFGLPAE-----QY--------AIRTGTHPRETTEKNIANFK 108
Query: 418 RDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEA 597
+ +G D + T D + + + +KG V++C + G+ L+
Sbjct: 109 KQLTAMGFSYDESREFATSDPEYYKWTQKLFLILYEKGLAYMADMAVNYCPELGTVLSNE 168
Query: 598 EIEYTDKTSPMVDVAYP--------------ALDPSALAAVFNATLPPDVQL-------- 711
EIE VD YP A L + P V+
Sbjct: 169 EIE----NGFSVDGGYPVERRMLRQWVLRITAFADQLLEGLDELDWPESVKQLQKNWIGK 224
Query: 712 -------------AVPIWTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXX 852
+ ++TT P TL +++ P ++ LV+ T Q+
Sbjct: 225 SSGASVNFATEHGVIEVFTTRPDTLIGVSFLALAP--EHPLVDLLTSDEQKAVVAQYIKE 282
Query: 853 XXXXXXRYGIAELLIHGSAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAP 1032
R I+E+ + +H + H + IP+ + ++V G+GAV P
Sbjct: 283 TQSKSERDRISEMKTKSGVFTGSYAKHPVTH-----KLIPIWIADYVLIGFGSGAVMGVP 337
Query: 1033 GHGQEDHQVFQQYGL 1077
H + D +Q+ L
Sbjct: 338 AHDERDLLFAEQFNL 352
Score = 40.2 bits (92), Expect = 0.084
Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 61/166 (36%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSGAPHP----RSAALMRQVAD-RVEQQG------VDIWY 1581
DW SRQR WG PIP+ +H G+ P L ++ D R E G V W
Sbjct: 406 DWLFSRQRYWGEPIPI-IHFEDGSCRPLRDYELPLLPPEIQDYRPEGVGQGPLAKVREWV 464
Query: 1582 SLDQTELLGTEADQYEKITDILDVWFDS--------GITHEAVLLERGLPK---PADLYL 1728
+ TE A + E T + W S + A + + P DLY+
Sbjct: 465 QVFDTET--QRAGKRE--THTMPQWAGSCWYYLRFCDAHNSAAPWAKEKEQYWMPVDLYI 520
Query: 1729 EGADQH-------RGWFQSSLLTGVAMDNAAPYKQCLTHGFTV----------------- 1836
GA+ R W Q G+ + P+K+ + G +
Sbjct: 521 GGAEHAVLHLLYARFWHQVFYEAGI-VSTPEPFKKLVNQGLVLATSYRIPGKGYIYPEIA 579
Query: 1837 ---------------DQHGRKMSKSLGNGIEPQDIIKTLGADILRLW 1932
D KMSKS NG++PQ +I GAD +R++
Sbjct: 580 KEENGKWVAPSGEELDVRQEKMSKSKLNGVDPQILIDEFGADAVRMY 626
>gi|4982478|gb|AAD36946.1|AF069441_6 (AF069441) putative leucyl tRNA
synthetase [Arabidopsis thaliana]
Length = 973
Score = 61.3 bits (146), Expect = 4e-08
Identities = 47/176 (26%), Positives = 71/176 (39%), Gaps = 2/176 (1%)
Frame = +1
Query: 76 EPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQ-IHLGHAVNKILKDIIIKSKH 252
EP WE + + +P F + D PY +G +H+GH + DI+ + +
Sbjct: 91 EPKWQRYWEDNRIFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLRR 150
Query: 253 LDGFDAPYIPGWDCHGLPIE-IAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFK 429
+ G++ + GWD GLP E AIE TL + I R K
Sbjct: 151 MQGYNVLHPMGWDAFGLPAEQYAIETGTHPKTTTL--------------KNIDRFRLQLK 196
Query: 430 RLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
LG DWD T + + ++ KG + PV+WC G+ LA E+
Sbjct: 197 SLGFSYDWDRELSTTEPDYYKWTQWIFLQLYKKGLAYQAEVPVNWCPALGTVLANEEV 254
Score = 38.3 bits (87), Expect = 0.32
Identities = 44/179 (24%), Positives = 67/179 (36%), Gaps = 2/179 (1%)
Frame = +1
Query: 967 IPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL-LNHYSAAELNPVD-ARGVYLPT 1140
IP+ + ++V A GTGA+ P H D++ +Y + + E N D A+ VY
Sbjct: 407 IPIWVADYVLASYGTGAIMAVPAHDTRDNEFALKYNIPIKWVVRNEANSSDDAKQVY--- 463
Query: 1141 TPPFSELTLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
GL I I +T +
Sbjct: 464 ---------PGLGI------------------------------------IENSSTLETG 478
Query: 1321 ISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHS 1500
+ + Q + + AALK I W + G + + R DW +RQR WG PIP+ + S
Sbjct: 479 LDINQLSSKEAALKVIE---WAERTGNGKKKVNYKLR-DWLFARQRYWGEPIPILILDES 534
Query: 1501 G 1503
G
Sbjct: 535 G 535
Score = 34.4 bits (77), Expect = 4.8
Identities = 15/27 (55%), Positives = 19/27 (69%)
Frame = +1
Query: 1852 KMSKSLGNGIEPQDIIKTLGADILRLW 1932
KMSKS GN + P D++ GAD LRL+
Sbjct: 730 KMSKSRGNVVNPDDVVLEYGADSLRLY 756
>gi|3024678|sp|P56457|SYL_HELPY LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA
LIGASE) (LEURS) >gi|2314727|gb|AAD08585.1| (AE000652)
leucyl-tRNA synthetase (leuS) [Helicobacter pylori 26695]
Length = 806
Score = 60.9 bits (145), Expect = 5e-08
Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSG-APHPR-SAALMRQVADRVEQQGVDIWYSLDQTELLG 1608
DW +SRQR WG PIP+ H G P + L + E ++ S T+
Sbjct: 414 DWGVSRQRYWGAPIPMIHCNHCGIVPETQLPVTLPEDIVIDGEGNPLEKHASWKFTQCPK 473
Query: 1609 TEADQYEKITDILDVWFDSGI----------THEAVLLERGLPK---PADLYLEGADQ-- 1743
+ + TD +D + S E ++ K P D Y+ G +
Sbjct: 474 CHKNALRE-TDTMDTFIQSSWYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAI 532
Query: 1744 ----HRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLG 1911
+ +F +L + P+KQ +T G + ++G KMSKS GN + P++I+K G
Sbjct: 533 LHLLYARFFTKALRDLGYLHLDEPFKQLITQGMVL-KNGAKMSKSKGNVVSPKEILKKYG 591
Query: 1912 ADILRLWIA-STDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSD 2088
AD RL+I + + E+ + L+ +R+ + A + N P V L++
Sbjct: 592 ADAARLFILFAAPPAKELEWNDSALEGAHRFIKRLYDKANAI--NPTTSKPEFKEVSLNE 649
Query: 2089 MIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSL 2226
L R V+ A + I + + + A T++ C L +L
Sbjct: 650 AQKLGRKKVYEALKKSHEI---FNKAESAYSFNTLIASCMEALNAL 692
Score = 51.5 bits (121), Expect = 3e-05
Identities = 33/143 (23%), Positives = 65/143 (45%)
Frame = +1
Query: 175 PYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTL 354
PY +G+IH+GH N + D + + L ++ + G+D G+P E A
Sbjct: 38 PYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENA------------ 85
Query: 355 DAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGH 534
A++ + + E I+ +++F+ LG + + T D + E R + +KG
Sbjct: 86 -AIKHGIHPKTWTYENIENMQKEFEALGFSFSKNREFATSDPDYTKFEQRFFIDLWEKGL 144
Query: 535 LIRGTKPVHWCFDCGSALAEAEI 603
+ R ++WC + + LA ++
Sbjct: 145 IYRKKAMLNWCPNDKTVLANEQV 167
>gi|4156066 (AE001567) LEUCYL-TRNA SYNTHETASE [Helicobacter pylori
J99]
Length = 806
Score = 60.5 bits (144), Expect = 7e-08
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 22/264 (8%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSG-APHPR-SAALMRQVADRVEQQGVDIWYSLDQTELLG 1608
DW +SRQR WG PIP+ +H G P + L + E ++ S +
Sbjct: 414 DWGVSRQRYWGAPIPMIHCKHCGIVPETQLPVTLPEDIVIDGEGNPLEKHASWKFAQCPK 473
Query: 1609 TEADQYEKITDILDVWFDSGI----------THEAVLLERGLPK---PADLYLEGADQ-- 1743
D + TD +D + S E ++ K P D Y+ G +
Sbjct: 474 CHKDALRE-TDTMDTFIQSSWYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAI 532
Query: 1744 ----HRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLG 1911
+ +F +L + P+KQ +T G + + G KMSKS GN + P++I+K G
Sbjct: 533 LHLLYARFFTKALRDLGYLHLDEPFKQLITQGMVL-KDGAKMSKSKGNVVSPKEILKKYG 591
Query: 1912 ADILRLWIA-STDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSD 2088
AD +RL+I + + E+ + L+ +R+ + A + P V L++
Sbjct: 592 ADAVRLFILFAAPPAKELEWNDNALEGAHRFIKRLYDKANAITPTTS--KPEFKEVGLNE 649
Query: 2089 MIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSL 2226
L R V+ A + I + + + A T++ C L +L
Sbjct: 650 AQKLARKKVYEALKKSHEI---FNKAESAYAFNTLIASCMEALNAL 692
Score = 50.8 bits (119), Expect = 6e-05
Identities = 32/143 (22%), Positives = 65/143 (45%)
Frame = +1
Query: 175 PYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTL 354
PY +G+IH+GH N + D + + L ++ + G+D G+P E A
Sbjct: 38 PYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENA------------ 85
Query: 355 DAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGH 534
A++ + + E I+ +++F+ LG + + T D + E + + +KG
Sbjct: 86 -AIKHGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGL 144
Query: 535 LIRGTKPVHWCFDCGSALAEAEI 603
+ R ++WC + + LA ++
Sbjct: 145 IYRKKAMLNWCPNDKTVLANEQV 167
>gi|3122899|sp|O30250|SYL_ARCFU LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA
LIGASE) (LEURS) >gi|2650668 (AE001108) leucyl-tRNA
synthetase (leuS) [Archaeoglobus fulgidus]
Length = 932
Score = 60.1 bits (143), Expect = 9e-08
Identities = 159/759 (20%), Positives = 278/759 (35%), Gaps = 83/759 (10%)
Frame = +1
Query: 97 WERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPY 276
WE+D + + + F L PY NG +H GH + D + + G++ +
Sbjct: 15 WEKDRIF---ESDPNEKEKFFLTIPYPYLNGNLHAGHTRTFTIGDAFARYMRMKGYNVLF 71
Query: 277 IPGWDCHGLPI-------------EIAIEKKYGKVGVTLDAVQFR--QKCREYAAEQIQL 411
G+ G PI I + KY V + D +Q +K EY + +
Sbjct: 72 PLGFHVTGTPIIGLAELIAKRDERTIEVYTKYHDVPLE-DLLQLTTPEKIVEYFSRE--- 127
Query: 412 QRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHWCFDCGSALA 591
+ K +G DW + T D ++ K+ + G +++GT PV +C
Sbjct: 128 ALQALKSIGYSIDWRRVFTTTDEEYQRFIEWQYWKLKELGLIVKGTHPVRYC-------- 179
Query: 592 EAEIEYTDKTSPMVDVAYPALDPSALA--AVFNATLPPDVQLAVPIWTTTPWTLPASLAI 765
+P+ D A + + + V L D L P T P T+ I
Sbjct: 180 ------PHDQNPVEDHDLLAGEEATIVEFTVIKFRL-EDGDLIFPCATLRPETVFGVTNI 232
Query: 766 SVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQHILAH 945
V PT YV+ E +W E L + K +E+ + A
Sbjct: 233 WVKPT-TYVIAE----VDGEKWFVSKEAY-----------EKLTYTEKKVRLLEE-VDAS 275
Query: 946 PFY--------PDRTIPLLLGNHVSAEDGTGAVHTAPGHG----------QEDHQVFQQY 1071
F+ +R +P+L V ++ TG V + P H + D + +Y
Sbjct: 276 QFFGKYVIVPLVNRKVPILPAEFVDTDNATGVVMSVPAHAPFDLAAIEDLKRDEETLAKY 335
Query: 1072 GL----LNHYSAAELNPVDARGVYLPTTPPFSEL-------------------------- 1161
G+ + L D GV P EL
Sbjct: 336 GIDKSVVESIKPIVLIKTDIEGV--PAEKLIRELGVKSQKDKELLDKATKTLYKKEYHTG 393
Query: 1162 -------TLAGLHIWKANPLIVDXXXXXXXXXXXXEMHHSYPHCWRHKTPIVFRATPQWF 1320
AG+ + +A + + E C +V QWF
Sbjct: 394 IMLDNTMNYAGMKVSEAKERVHEDLVKLGLGDVFYEFSEKPVICRCGTKCVVKVVRDQWF 453
Query: 1321 ISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPLFVHRHS 1500
++ + L + + P + + + IE D +R++ G IP
Sbjct: 454 LNYSNREWKEKVLNHLEKMRIIPDYYKEEFRNKIEWLRDKACARRKGLGTRIPW------ 507
Query: 1501 GAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWFDSGITHE 1680
L+ ++D I LL E E + +L + G E
Sbjct: 508 -----DKEWLIESLSDSTIYMAYYILAKYINAGLLKAENMTPEFLDYVLLGKGEVGKVAE 562
Query: 1681 AVLLERGLPK----------PADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGF 1830
A L L + P DL G D L VA+ + + +
Sbjct: 563 ASKLSVELIQQIRDDFEYWYPVDLRSSGKDLVANHLLFYLFHHVAIFPPDKWPRAIAVNG 622
Query: 1831 TVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIA-STDYSNEMSLSQEILKRTTDAYR 2007
V G+KMSKS G + + ++ GAD+ RL+I + +Y ++ ++ + R
Sbjct: 623 YVSLEGKKMSKSKGPLLTMKRAVQQYGADVTRLYILHAAEYDSDADWKSREVEGLANHLR 682
Query: 2008 RIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQ 2187
R N + +L + ++ LDRW+V R +Q+ IK D + +
Sbjct: 683 RFYNLVK-----------ENYLKEVGELTTLDRWLVSR---MQRAIKEVREAMDNLQTRR 728
Query: 2188 TILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADE 2367
+ + + ++ D + +R + + +++ +AP +E
Sbjct: 729 AV--------NAAFFELMNDVRWYLRRGGEN-------LAIILDDWIKLLAPFAPHICEE 773
Query: 2368 LW 2373
LW
Sbjct: 774 LW 775
>gi|5458296|emb|CAB49785.1| (AJ248285) leucyl-tRNA synthetase (leuS)
[Pyrococcus abyssi]
Length = 967
Score = 59.7 bits (142), Expect = 1e-07
Identities = 68/324 (20%), Positives = 127/324 (38%), Gaps = 17/324 (5%)
Frame = +1
Query: 82 AILERWERDDFYAQL-RAHAKGRPL---FLLHDGPPYANGQIHLGHAVNKILKDIIIKSK 249
AI E+W++ A++ + K +P F + PY +G +H+GHA + D+I + K
Sbjct: 8 AIEEKWQKRWLEAKVFEPNIKDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFK 67
Query: 250 HLDGFDAPYIPGWDCHGLPIEIAIEKKYGK----VGVTLDAVQFRQKCREYAAEQIQL-- 411
+ G++ + GW G PI E+ + + + D + ++ + + +
Sbjct: 68 RMQGYNVLFPMGWHITGSPIVGIAERIKNRDPHTIWIYRDVYKVPEEILWTFEDPVNIVK 127
Query: 412 -----QRRDFKRLGIIGDWDAPYKTLDF--RFEADEIRALAKIVDKGHLIRGTKPVHWCF 570
+ F R G DW + T F K+ +KG++++G V W
Sbjct: 128 YFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFLKLKEKGYIVKGAHRVRWDP 187
Query: 571 DCGSALAEAEIEYTDKTSPMVDVAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPWTLP 750
G+ L + ++ M P L+ + D + +P T P T+
Sbjct: 188 VVGTPLGDHDL--------MEGEDVPILE---YVIIKFELKEGDETIYLPAATLRPETVY 236
Query: 751 ASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAAMEQ 930
+ + P YV + + W + E+ + KG +
Sbjct: 237 GVTNMWINPNATYVKAKVKRGGKEETWIISKEAAYKLS---FQDREIEVIEEFKGEKLIG 293
Query: 931 HILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDH 1053
+ +P D I +L V ++ TG V + P H DH
Sbjct: 294 KYVRNPVTGDEVI-ILPAEFVDPDNATGVVMSVPAHAPFDH 333
Score = 51.9 bits (122), Expect = 3e-05
Identities = 81/360 (22%), Positives = 154/360 (42%), Gaps = 26/360 (7%)
Frame = +1
Query: 1312 QWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPL--- 1482
QWFI + + A KA+ + YP+ +A+ ++I+ +R+ G P+P
Sbjct: 464 QWFIDYGNSEWKEKARKALARMKIYPETRRAQFEAIIDWLDKKACARKVGLGTPLPWDPE 523
Query: 1483 -FVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKIT-DILDVW 1656
+ S + + + + +R+ ++G LD EK+T + D
Sbjct: 524 WVIESLSDSTIYMAYYTISRHINRLREEG-----RLDP-----------EKLTPEFFDYI 567
Query: 1657 FDSGITHEAVL-LERGLPKPADLYLEGADQHRGWFQ-----------SSLLTGVAMDNAA 1800
F + E LE+ PA++ E ++ W+ + LT ++ A
Sbjct: 568 FLEEFSEEREKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVA 627
Query: 1801 PYKQ------CLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIAS-TDYSNE 1959
+++ +GF + G+KMSKS GN + D I+ GAD++RL+I S ++ ++
Sbjct: 628 IFREEHWPKGIAVNGFGTLE-GQKMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSD 686
Query: 1960 MSLSQEILKRTTDAYRRIRNTARF--LLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFEL 2133
R + + R RF L+ ++ ++ ++ +D+W++HR +
Sbjct: 687 FDW------RRKEVGKLRRQLERFYELISQFAEYEAKENV----ELKTIDKWLLHRLNKA 736
Query: 2134 QQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHL 2313
+ A + VQ DL R Y R + + + + L
Sbjct: 737 IEGTTKALEEFRTRTAVQWAFYSIMNDL----------RWYMRRTEGRDDEAKRFVLRKL 786
Query: 2314 TAAFVRWIAPILSFTADELWSYLPGD 2391
+VR +AP +ELW L G+
Sbjct: 787 ADIWVRLMAPFTPHICEELWEKLGGE 812
>gi|3257379|dbj|BAA30062| (AP000004) 967aa long hypothetical
leucyl-tRNA synthetase [Pyrococcus horikoshii]
Length = 967
Score = 57.8 bits (137), Expect = 4e-07
Identities = 69/324 (21%), Positives = 130/324 (39%), Gaps = 20/324 (6%)
Frame = +1
Query: 82 AILERWERDDFYAQL-RAHAKGRPL---FLLHDGPPYANGQIHLGHAVNKILKDIIIKSK 249
AI E+W++ A++ + + +P F + PY +G +H+GHA + D+I + K
Sbjct: 8 AIEEKWQKRWLEAKIFEPNIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFK 67
Query: 250 HLDGFDAPYIPGWDCHGLPIEIAIEKKYGK----VGVTLDAVQFRQKCREYAAEQIQL-- 411
+ G++ + W G PI E+ + + + D + ++ + I +
Sbjct: 68 RMQGYNVLFPMAWHITGSPIVGIAERIKNRDPKTIWIYRDVYKVPEEILWTFEDPINIVK 127
Query: 412 -----QRRDFKRLGIIGDWDAPYKTLDF--RFEADEIRALAKIVDKGHLIRGTKPVHWCF 570
+ F R G DW + T F K+ +KG++++G V W
Sbjct: 128 YFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFWKLKEKGYIVKGAHRVRWDP 187
Query: 571 DCGSALAEAEIEYTDKTSPMVD---VAYPALDPSALAAVFNATLPPDVQLAVPIWTTTPW 741
G+ L + ++ + P++D + + + + + ATL P+ V T W
Sbjct: 188 VVGTPLGDHDL-MEGEDVPILDYIIIKFELRENGEVIYLPAATLRPETVYGV----TNMW 242
Query: 742 TLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHGSAKGAA 921
V P YV + + W + E+ + KG
Sbjct: 243 ---------VNPNATYVKAKVRRKDKEETWIVSKEAAYKLS---FQDREIEVIEEFKGEK 290
Query: 922 MEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDH 1053
+ + +P D I +L V ++ TG V + P H DH
Sbjct: 291 LIGKYVRNPVSGDEVI-ILPAEFVDPDNATGVVMSVPAHAPFDH 333
Score = 50.4 bits (118), Expect = 7e-05
Identities = 82/360 (22%), Positives = 149/360 (40%), Gaps = 27/360 (7%)
Frame = +1
Query: 1312 QWFISMEQAALRSAALKAITHVTWYPQWGQARILSMIENRPDWTISRQRTWGVPIPL--- 1482
QWFI + A KA+ + P+ +A+ ++I+ +R+ G P+P
Sbjct: 464 QWFIDYGNPEWKEKARKALERMKILPETRRAQFEAIIDWLDKKACARKIGLGTPLPWDPE 523
Query: 1483 -FVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQTELLGTEADQYEKITDILDVWF 1659
+ S + + + + +++ Q+G LD +L D ++
Sbjct: 524 WVIESLSDSTIYMAYYTISRHINKLRQEG-----KLDPEKLTPEFFDY---------IFL 569
Query: 1660 DSGITHEAVLLERGLPKPADLYLEGADQHRGWFQ-----------SSLLTGVAMDNAAPY 1806
+ + LE+ PA++ E ++ W+ + LT ++ A +
Sbjct: 570 EEFSEDKEKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVAIF 629
Query: 1807 KQ------CLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIAS-----TDYS 1953
++ +GF + G+KMSKS GN + D I+ GAD++RL+I S +D+
Sbjct: 630 REEHWPKGIAVNGFGTLE-GQKMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSDFD 688
Query: 1954 NEMSLSQEILKRTTDAYRRIRNTARF-LLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFE 2130
++ K+ Y I A + + GN V L D +DRW++HR +
Sbjct: 689 WRRKEVGKLRKQIERFYELISQFAEYEVKGN----------VELKD---IDRWMLHRLNK 735
Query: 2131 LQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYH 2310
+ A + VQ DL R Y R + + + +
Sbjct: 736 AIKETTNALEEFRTRTAVQWAFYSIMNDL----------RWYLRRTEGRDDEAKRYVLRT 785
Query: 2311 LTAAFVRWIAPILSFTADELWSYLPGD 2391
L +VR +AP +ELW L G+
Sbjct: 786 LADVWVRLMAPFTPHICEELWEKLGGE 812
>gi|5051889|gb|AAD38353.1| (AF110955) valyl tRNA synthetase
[Cryptosporidium parvum]
Length = 214
Score = 56.2 bits (133), Expect = 1e-06
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 15/99 (15%)
Frame = +1
Query: 1627 EKITDILDVWFDSGITHEAVLLERGLPK---------------PADLYLEGADQHRGWFQ 1761
E+ +D+LD WF SG+ ++L G P P L G+D W
Sbjct: 33 ERDSDVLDTWFSSGLIPFSLL---GWPDEVNQKTKLNDLSTFFPTTLLETGSDILFFWVA 89
Query: 1762 SSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADIL 1923
++ A + P+K H D GRKMSKSLGN I+P +II+ + D L
Sbjct: 90 RMVMLSFACTDKLPFKTIYLHAMVRDSQGRKMSKSLGNVIDPIEIIEGISFDDL 143
>gi|2507608|sp|P47508|SYL_MYCGE LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA
LIGASE) (LEURS) >gi|1361707|pir||D64229 leucine--tRNA
ligase (EC 6.1.1.4) - Mycoplasma genitalium (SGC3)
>gi|3844862 (U39706) leucyl-tRNA synthetase (leuS)
[Mycoplasma genitalium]
Length = 792
Score = 55.0 bits (130), Expect = 3e-06
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 31/175 (17%)
Frame = +1
Query: 1411 LSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGV------- 1569
L+ + DW SRQR WG P P+ ++ + + + + G
Sbjct: 397 LTTVYKLRDWIFSRQRYWGEPFPIIFDENNTPHLVEQLPVELPLLENYKPDGSGNSPLMR 456
Query: 1570 -DIWYSLDQTELLGTEADQYEKITDILDVWFDSGITHEAVLLERGLPK------------ 1710
W ++ + + Y++ T+ + W S + L+ P
Sbjct: 457 NQAWVNIVKDNI------HYQRETNTMPQWAGSCWYYLGYLMLIKNPNFWPIDSKEAKKL 510
Query: 1711 -----PADLYLEGADQ------HRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKM 1857
P DLY+ GA+ + ++ L + P+++ + G + G+KM
Sbjct: 511 FDQYLPVDLYVGGAEHAVLHLLYARFWHKFLFDKKLVSTKEPFQKLINQGMVLGPDGKKM 570
Query: 1858 SKSLGNGIEPQDIIKTLGADILRLWI 1935
SKS GN I P ++ + GAD LRL++
Sbjct: 571 SKSKGNTINPTPLVDSHGADALRLYL 596
Score = 37.5 bits (85), Expect = 0.55
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Frame = +1
Query: 88 LERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFD 267
L++W+ D + + + + ++L P + +HLGH + D+I + GF+
Sbjct: 12 LKKWKNKDVN-RFESDSNKKKYYVLDMFPYPSAAGLHLGHVRAYTITDVISRYYKAKGFN 70
Query: 268 APYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIG 447
+ G+D GLP E +Y A+ Q + + I G
Sbjct: 71 VIHPIGFDAFGLPAE-----QY--------AINSNQNPGSWTDQNINNFINQLTSFGFDY 117
Query: 448 DWDAPYKTLDFRFE-------ADEIRA-LAKIVDKGHLIRGTKPVHWCFDCGSALAEAEI 603
D+ KT D R+ ++ +A LA++VD V+WC G+ LA E+
Sbjct: 118 DYHLSLKTTDPRYYKYTQWIFSELFKANLAELVD--------IDVNWCEQLGTVLANEEV 169
>gi|6459971|gb|AAF11720.1|AE002050_6 (AE002050) leucyl-tRNA synthetase
[Deinococcus radiodurans]
Length = 874
Score = 55.0 bits (130), Expect = 3e-06
Identities = 53/167 (31%), Positives = 78/167 (45%), Gaps = 24/167 (14%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSGAPHP-----RSAALMRQVADRVEQQG---VDIWYSLD 1590
DW +RQR WG PIP FVH P L VA Q +D +
Sbjct: 482 DWLFARQRYWGTPIP-FVHCEKCGMQPVPEDQLPVKLPENVAFTPTGQSPLKLDEEWKTT 540
Query: 1591 QTELLGTEADQYEKITDILDVWFDSGITHEAVL---LERGLPKPADLYLEGADQHRGWFQ 1761
G A E+ TD +D + DS L + G P+ L D + G +
Sbjct: 541 TCPCCGGPA---ERETDTMDTFVDSSWYMYRYLSPNYDGGPFDPSKAGLLPVDLYTGGIE 597
Query: 1762 SSLL--------TGVAMD-----NAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIK 1902
++L T V D + P+ + G + + G KMSKS GN ++P D+++
Sbjct: 598 HAILHLLYSRFWTKVMRDMGLTTQSEPFARLRNQGMVLGEDGEKMSKSRGNVVDPDDLVR 657
Query: 1903 TLGADILRLWI 1935
GAD +R ++
Sbjct: 658 EYGADTVRAFL 668
Score = 47.6 bits (111), Expect = 5e-04
Identities = 68/328 (20%), Positives = 127/328 (37%), Gaps = 30/328 (9%)
Frame = +1
Query: 94 RWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHLDGFDAP 273
+W+ Y + +A G + L P Y +G +H+GH + D + + G++
Sbjct: 81 QWQESGLY-KFDENAPGEKFYALTMFP-YPSGNLHIGHWYANVAPDARARWLRMRGYNVL 138
Query: 274 YIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDW 453
+ +D GLP E A A++ + I+ F R+G + DW
Sbjct: 139 FPMAFDAFGLPAENA-------------AIKNNTNPATWTYANIERMTGQFSRMGTMIDW 185
Query: 454 DAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHW-----------------CFDCGS 582
+ T D + + +G + V+W C CG+
Sbjct: 186 SRKFATCDPEYYRWNQWFFIEFWKRGLAYKKGGLVNWCPKDQTVLANEQVVNGHCERCGT 245
Query: 583 A-----LAEAEIEYTDKTSPMVDVAYPALDPSALAAVFN---ATLPPDVQLAVP-----I 723
A L++ ++ TD ++D + + A N ++ +V P +
Sbjct: 246 AVERRNLSQWYLKITDYAEELLDFSATDMPEKVRAMQTNWIGKSVGAEVTFDTPAGPETV 305
Query: 724 WTTTPWTLPASLAISVGPTLDYVLVEGPTHSGQRRWXXXXXXXXXXXXXRYGIAELLIHG 903
+TT P TL + + + P ++ V+ T QR R E G
Sbjct: 306 FTTRPDTLMGATFMVLAP--EHAKVKELTTDEQR----AEVEAYVAAAGRKTDVERQQEG 359
Query: 904 SAKGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL 1077
G + HP +P+ + ++V GTG++ P H + D +++ L
Sbjct: 360 EKTGVFTGSY-ATHPI-SGHQLPIWVADYVLVTYGTGSIMAVPAHDERDFAFAKKFDL 415
>gi|6322209|ref|NP_012284.1|MUC1| cell surface flocculin with
structure similar to serine/threonine-rich GPI-anchored
cell wall proteins; Muc1p >gi|728850|sp|P08640|AMYH_YEAST
GLUCOAMYLASE S1/S2 PRECURSOR (GLUCAN
1,4-ALPHA-GLUCOSIDASE) (1,4-ALPHA-D-GLUCAN
GLUCOHYDROLASE) >gi|626156|pir||S48478 glucan
1,4-alpha-glucosidase (EC 3.2.1.3) - yeast (Saccharomyces
cerevisiae) >gi|557822|emb|CAA86176| (Z38061) mal5, sta1,
len: 1367, CAI: 0.3, AMYH_YEAST P08640 GLUCOAMYLASE S1
(EC 3.2.1.3) [Saccharomyces cerevisiae] >gi|1304387
(U30626) glucoamylase [Saccharomyces cerevisiae var.
diastaticus]
Length = 1367
Score = 54.3 bits (128), Expect = 5e-06
Identities = 120/648 (18%), Positives = 197/648 (29%), Gaps = 30/648 (4%)
Frame = +2
Query: 14 TKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMAR 193
T C +PT P T+P + +++ T T P P ++ SS+ PTP +
Sbjct: 276 TTTSCTKEKPTPPHHDTTPCTKKKTTTSKTCTKKTTTPVPTPSSSTTESSSAPVPTPSSS 335
Query: 194 STLAMXXXXXXXXXXXXXX-----XXMALTHPTSPAGIATACRLKLPLKKNTAKSA*PWM 358
+T + ++P +T P+ +T +S+ +
Sbjct: 336 TTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPV 395
Query: 359 PSNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKSLTKAT* 538
P+ S+ ++ + P+ S+ AP+ S T+++
Sbjct: 396 PTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSS 455
Query: 539 SVVP------NQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTPHSPL 700
+ VP + A + + + PT P T + + S P P
Sbjct: 456 APVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAP-VPT 514
Query: 701 MYNLXXXXXXXXXXXXXXXXXXLLGQPWTTSWLKDRPTPVSAAGSSWRKHSPPKHWHAT- 877
+ P T+S + PV SS + S +T
Sbjct: 515 PSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTT 574
Query: 878 ----------ASPNCSSMAAPKEPPWSSTSWPTRFIPIAPSPYCLATTFXXXXXXXXXXX 1027
+S S +AP P SST+ + AP+P T
Sbjct: 575 ESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSS--APAPTPSSSTTESSSAPVTSSTTE 632
Query: 1028 XLXXXXXXXXSFNNTDYSIXXXXXXXXXXXXXXXXXRQPHHSVN*HWPACISGKPTH*LS 1207
S S P S A ++ T S
Sbjct: 633 SSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSS 692
Query: 1208 TPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCAQPPSRPSHTXXXX 1387
P S S+ + TP + T+ S AP P+ SS + A P+ S T
Sbjct: 693 APVTS--STTESSSAPVPTPSSSTTES--SSAPVPTPSSSTTESSSAPVPTPSSSTTESS 748
Query: 1388 XXXXXXXXXXXXXXXXXGPSPDNAPGASR-FPCLYTVTAEHPIHAAPH*CAKLPTASNNR 1564
PS +S P + T E A +PT S++
Sbjct: 749 SAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESS-------SAPVPTPSSST 801
Query: 1565 ASTS----GTPWTKPNYSALKPINTKKSPISLTSGL---IPASPTKQCSLSAASLNPLTS 1723
+S TP + N ++ P +T S + +S + P+S T + S SA + T
Sbjct: 802 TESSVAPVPTPSSSSNITSSAPSSTPFSSSTESSSVPVPTPSSSTTESS-SAPVSSSTTE 860
Query: 1724 TSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRTSSR 1903
+S P K P S T+
Sbjct: 861 SSVAPVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYPGSQTETSVSSTTET 920
Query: 1904 HWAPTSCVCGLPPPTTAT 1957
PT + P+T T
Sbjct: 921 TIVPTKTTTSVTTPSTTT 938
Score = 51.5 bits (121), Expect = 3e-05
Identities = 104/551 (18%), Positives = 174/551 (30%), Gaps = 31/551 (5%)
Frame = +2
Query: 1172 ACISGKPTH*LSTPCASVASSLP---PLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRP 1342
+C KPT +T C + P C T + P P+ SS +
Sbjct: 266 SCTKEKPTPPTTTSCTKEKPTPPHHDTTPCTKKKTTTSKTCTKKTTTPVPTPSSSTTESS 325
Query: 1343 CAQPPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASR-FPCLYTVTAEHPIHA 1519
A P+ S T PS +S T ++ P+ +
Sbjct: 326 SAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTS 385
Query: 1520 AP--H*CAKLPTASNNRASTSGTPWTKPNY-SALKPINTKKSPISLTSGLIPASPTKQCS 1690
+ A +PT S++ +S P T S+ P+ + + S S + +S T+ S
Sbjct: 386 STTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESS--SAPVTSSTTESSS 443
Query: 1691 LSAASLNPLTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHW 1870
S +S++ VPT
Sbjct: 444 APVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSS 503
Query: 1871 AMESN----PRTSSRHWAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXX 2038
ES+ P SS +S P +T +P
Sbjct: 504 TTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTE 563
Query: 2039 XXCMALTPPYT---SCP*AT*SPWIAGSFTAPL---------NSNRPSKPPTPVTTLPKS 2182
+T T S P T S S +AP+ +S+ P+ PTP ++ +S
Sbjct: 564 SSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPA--PTPSSSTTES 621
Query: 2183 SKQYXXXXXXXXXXXXXXXPKIVSTQCAKTP-PVAAPHRPPCTISPPPLSDGSPPYSAS- 2356
S P +T+ + P P + + +P P S S+S
Sbjct: 622 SSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSA 681
Query: 2357 PLTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVTTSPKYWNPCAPT 2536
P+T+ TT P+
Sbjct: 682 PVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPS 741
Query: 2537 ALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLVEMSPLPRPTPMASLSAPNQPPKPN 2716
+ +S + +P + SS E S P PTP +S + + P P
Sbjct: 742 SSTT-----ESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVP- 795
Query: 2717 VPAAGIT------VPT*ALTQPIPNSADAASPTLTDQENSAI 2824
P++ T VPT + + I +SA +++P + E+S++
Sbjct: 796 TPSSSTTESSVAPVPTPSSSSNITSSAPSSTPFSSSTESSSV 837
Score = 46.1 bits (107), Expect = 0.001
Identities = 120/684 (17%), Positives = 202/684 (28%), Gaps = 21/684 (3%)
Frame = +2
Query: 779 PWTTSWLKDRPTPVSAAGSSWRKHSPPKH-------WHATASPNCSSMAAPKEPPWSSTS 937
P TTS K++PTP + + K +PP H T S C+ P SS++
Sbjct: 262 PTTTSCTKEKPTPPTTTSCTKEKPTPPHHDTTPCTKKKTTTSKTCTKKTTTPVPTPSSST 321
Query: 938 WPTRFIPIAPSPYCLATTFXXXXXXXXXXXXLXXXXXXXXSFNNTDYSIXXXXXXXXXXX 1117
+ P+ P+P T S S
Sbjct: 322 TESSSAPV-PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSS 380
Query: 1118 XXXXXXRQPHHSVN*HWPACISGKPTH*LSTPCASVASSLPPLKCII---ATPIAGATKP 1288
S P+ + + + T + +SS P + P+ +T
Sbjct: 381 APVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTE 440
Query: 1289 PLSFAPPPSGSSLWNKRPCAQPPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGA 1468
S AP S ++ + P P S + + P+P ++
Sbjct: 441 S-SSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPV-----PTPSSSTTE 494
Query: 1469 SRFPCLYTVTAEHPIHAAPH*CAKLPTASNNRASTSGTPWTKPNYSALKPINTKKSPISL 1648
S + + T E A +PT S++ +S P P+ S + + + +
Sbjct: 495 SSSAPVTSSTTESS-------SAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTT 547
Query: 1649 TSGLIPASPTKQCSLSAASLNPLTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1828
S P PT S + +S P+TS++ T
Sbjct: 548 ESSSAPV-PTPSSSTTESSSTPVTSST---TESSSAPVPTPSSSTTESSSAPVPTPSSST 603
Query: 1829 XXXXXXXXKCPNHWAMESN--PRTSSRHWAPTSCVCGLPPPTTAT----KCPSPKRXXXX 1990
P+ ES+ P TSS S +P P+++T P P
Sbjct: 604 TESSSAPAPTPSSSTTESSSAPVTSS---TTESSSAPVPTPSSSTTESSSAPVPTPSSS- 659
Query: 1991 XXXXXXXXXXXXXXXXXXCMALTPPYTSCP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTT 2170
T +S P T S S +AP+ S+ PVT+
Sbjct: 660 ----------------------TTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTS 697
Query: 2171 LPKSSKQYXXXXXXXXXXXXXXXP---KIVSTQCAKTPPVAAPHRPPCTISPPPLSDGSP 2341
S P ST + + PV P S P++ +
Sbjct: 698 STTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTT 757
Query: 2342 PYSASPLTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVTTSPKYWN 2521
S++P+ V T N
Sbjct: 758 ESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSN 817
Query: 2522 PCAPTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLVEMSPLPRPTPMASLSAPNQ 2701
+ +P ++ S E S +P PTP +S + +
Sbjct: 818 --------------------------ITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSS 851
Query: 2702 PP--KPNVPAAGITVPT*ALTQPIPNSADAASPTLTDQENSAIGS 2830
P ++ VPT + + I +SA ++ P + E+ + G+
Sbjct: 852 APVSSSTTESSVAPVPTPSSSSNITSSAPSSIPFSSTTESFSTGT 896
Score = 39.9 bits (91), Expect = 0.11
Identities = 72/429 (16%), Positives = 122/429 (27%), Gaps = 5/429 (1%)
Frame = +2
Query: 1535 AKLPTASNNRASTSGTPWTKPNY-SALKPINTKKSPISLTSGL-IPASPTKQCSLSAASL 1708
A +PT S++ +S P T S+ P+ T S + +S + +S T+ S S
Sbjct: 327 APVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSS 386
Query: 1709 NPLTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNP 1888
+S++ VPT S P
Sbjct: 387 TTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESS-------------SAP 433
Query: 1889 RTSSRHWAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPY 2068
TSS + ++ V +++ P+P T
Sbjct: 434 VTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSS-------------TTES 480
Query: 2069 TSCP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXX---XXXXXXXXXX 2239
+S P T S S +AP+ S+ PV T S+ +
Sbjct: 481 SSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSA 540
Query: 2240 PKIVSTQCAKTPPVAAPHRPPCTISPPPLSDGSPPYSASPLTNXXXXXXXXXXXXXXXXX 2419
P ST + + PV P S P++ + S++P+
Sbjct: 541 PVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPS 600
Query: 2420 XXXXXXXXXXXXXXXXXXXXXXXXCVTTSPKYWNPCAPTALLAPH*KQKSXXXXXXXXXX 2599
VT+S
Sbjct: 601 SSTTESSSAPAPTPSSSTTESSSAPVTSS-----------------------------TT 631
Query: 2600 AGNHSPKNSASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPAAGITVPT*ALTQPIPNSA 2779
+ +P + SS E S P PTP +S + + P P ++ + +T S+
Sbjct: 632 ESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESS 691
Query: 2780 DAASPTLTDQENSA 2821
A + T + +SA
Sbjct: 692 SAPVTSSTTESSSA 705
>gi|2501028|sp|P73274|SYL_SYNY3 LEUCYL-TRNA SYNTHETASE
(LEUCINE--TRNA LIGASE) (LEURS) >gi|1652380|dbj|BAA17302|
(D90905) leucyl-tRNA synthetase [Synechocystis sp.]
Length = 869
Score = 53.1 bits (125), Expect = 1e-05
Identities = 27/99 (27%), Positives = 46/99 (46%)
Frame = +1
Query: 175 PYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTL 354
PY +G +H+GH N + D+I + K + G+ + GWD GLP E A
Sbjct: 42 PYPSGNLHMGHVRNYTITDVIARLKRMQGYQVLHPMGWDAFGLPAENA------------ 89
Query: 355 DAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKT 471
A++ +++ + I R ++LG+ DW+ T
Sbjct: 90 -AIERGIPPKQWTEKNIAQMRAQLQQLGLSIDWEREVAT 127
>gi|6094405|sp|O83595|SYL_TREPA LEUCYL-TRNA SYNTHETASE
(LEUCINE--TRNA LIGASE) (LEURS) >gi|3322882 (AE001234)
leucyl-tRNA synthetase (leuS) [Treponema pallidum]
Length = 878
Score = 52.7 bits (124), Expect = 1e-05
Identities = 36/143 (25%), Positives = 56/143 (38%), Gaps = 1/143 (0%)
Frame = +1
Query: 175 PYANGQ-IHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT 351
PY + Q +H+GH DI + + G++ + G+D GLP E + T
Sbjct: 43 PYPSAQGLHVGHPEGYTATDIYCRYLRMGGYNVLHPMGFDAFGLPAE-----NFALKTGT 97
Query: 352 LDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKG 531
V C + RR + G DW+ T D + K+ +KG
Sbjct: 98 HPRVSTSANCDTF--------RRQIQSFGFSYDWEREISTADPEYYRWTQWLFLKLYEKG 149
Query: 532 HLIRGTKPVHWCFDCGSALAEAEI 603
T P++WC C + LA E+
Sbjct: 150 LAYEATAPINWCPSCKTGLANEEV 173
Score = 35.2 bits (79), Expect = 2.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 958 DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL 1077
D IP+ +G++V GTGAV P H Q D ++GL
Sbjct: 326 DMRIPVWVGDYVLVSYGTGAVMAVPAHDQRDWDFATRFGL 365
Score = 33.6 bits (75), Expect = 8.2
Identities = 22/38 (57%), Positives = 24/38 (62%), Gaps = 4/38 (10%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHS--GAPHPRSA--ALMRQVAD 1548
DW SRQR WG PIPL VH S P P SA L+ + AD
Sbjct: 438 DWVFSRQRYWGEPIPL-VHCPSCGVVPLPESALPLLLPETAD 478
>gi|2842556|dbj|BAA24690| (AB010832) ORF3; putative leucyl-tRNA
synthase [Symbiobacterium thermophilum]
Length = 143
Score = 52.3 bits (123), Expect = 2e-05
Identities = 34/133 (25%), Positives = 57/133 (42%)
Frame = +1
Query: 55 RGDLPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDI 234
R D + EP RW+ + Y R + RP + PY +G++H+GH N + D+
Sbjct: 5 RFDFREAEPRWQRRWDEEGIYKVERDLS--RPKYYALAMFPYPSGKLHMGHVRNYTIVDV 62
Query: 235 IIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQ 414
I + + + G++ + G+D G+P E A A+Q + E I
Sbjct: 63 IARYRRMKGYNVLHPMGFDSFGMPAENA-------------AIQHGANPAVWTRENIAEM 109
Query: 415 RRDFKRLGIIGDW 453
K++G DW
Sbjct: 110 TAQLKQMGYSYDW 122
>gi|2688147 (AE001135) leucyl-tRNA synthetase (leuS) [Borrelia
burgdorferi]
Length = 840
Score = 51.9 bits (122), Expect = 3e-05
Identities = 46/158 (29%), Positives = 68/158 (42%), Gaps = 1/158 (0%)
Frame = +1
Query: 139 KGRPLFLLHDGP-PYANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEI 315
K + L++L P P ANG +H+GH DI + K L+GF + G+D GLP E
Sbjct: 33 KEKRLYILDMFPYPSANG-LHVGHPEGYTATDIFGRYKLLNGFHVLHPIGFDSFGLPAE- 90
Query: 316 AIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEAD 495
Y A+Q ++ E I ++ K LG DWD +T + +
Sbjct: 91 ----NY--------AIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKW 138
Query: 496 EIRALAKIVDKGHLIRGTKPVHWCFDCGSALAEAEIEYT 612
++ KG PV +C + G+ LA EI T
Sbjct: 139 TQWIFLQLYKKGLAYVKEMPVWYCPELGTVLANEEIIQT 177
Score = 39.5 bits (90), Expect = 0.14
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 69/166 (41%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSGAPHPRSAALMRQVADRVEQQGVDIWYSLDQT---ELL 1605
DW SRQR WG PIP+ L ++ + + + D+ L + +
Sbjct: 426 DWIFSRQRYWGEPIPI---------------LFDKLGNAIPLEENDLPLKLPEIANYKPS 470
Query: 1606 GTEADQYEKITDILDVWFDSGITHEAVLLERGL-----------PK-------------- 1710
GT +I D ++V D G T E + + PK
Sbjct: 471 GTGESPLSRIKDWVNVK-DMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYW 529
Query: 1711 -PADLYLEGADQ-------HRGWFQSSLLTGVAMDNAAPYKQCLTHGFT----------- 1833
P DLY+ GA+ R W + G ++ P+K+ + G
Sbjct: 530 MPVDLYIGGAEHTVLHLLYSRFWHKVLYDLGY-VNTKEPFKKLINQGIITSFSYQKENGV 588
Query: 1834 ----------------------VDQHGRKMSKSLGNGIEPQDIIKTLGADILRLW 1932
V Q KMSKSL N I P DIIK GAD +R++
Sbjct: 589 LIPNDQVIEKDNKFFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIY 643
Score = 34.8 bits (78), Expect = 3.7
Identities = 17/46 (36%), Positives = 28/46 (59%), Gaps = 2/46 (4%)
Frame = +1
Query: 940 AHPFYP--DRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGL 1077
++ F+P + IP+ +G++V GTGAV P H + D Q ++Y L
Sbjct: 315 SYAFHPITNEKIPIWVGSYVLGTYGTGAVMGVPAHDERDFQFAKKYQL 362
>gi|3219299|dbj|BAA28844| (AB008530) Valyl tRNA Synthetase
[Trichomonas vaginalis]
Length = 368
Score = 51.5 bits (121), Expect = 3e-05
Identities = 39/163 (23%), Positives = 71/163 (42%), Gaps = 3/163 (1%)
Frame = +1
Query: 1897 IKTLGADILRLWIASTDYSNEMS-LSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHL 2073
I G D +RL + S +N + L+ ++ + ++ N RF L N F+P
Sbjct: 24 IPQCGTDAMRLALCSFAGANRTANLNVSVIVSYRNFCNKMWNAVRFALPNFDKFNPEDSH 83
Query: 2074 VPL--SDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKD 2247
L S LD+W + + + A + A+ V + +F + S+YL+ TK
Sbjct: 84 KDLDASKTTPLDKWALKKLSLAIKAATAGLEDFKMADAVNGMTHFFHDEFCSVYLEGTKP 143
Query: 2248 RLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
+DA + +Y + +R + P + + +ELW +LP
Sbjct: 144 --IVNGDDAAAKEVVAAVLYECIESTMRMLHPFMPYVTEELWQHLP 187
>gi|6094407|sp|O33925|SYM_THEMA METHIONYL-TRNA SYNTHETASE
(METHIONINE--TRNA LIGASE) (METRS) >gi|2645225 (U76417)
methionyl-tRNA synthetase [Thermotoga maritima]
>gi|4981630|gb|AAD36162.1|AE001768_11 (AE001768)
methionyl-tRNA synthetase [Thermotoga maritima]
Length = 629
Score = 50.4 bits (118), Expect = 7e-05
Identities = 44/164 (26%), Positives = 71/164 (42%), Gaps = 8/164 (4%)
Frame = +1
Query: 1711 PADLYLEGADQHRGWFQSSLLTGVAMDNAAPY-KQCLTHGFTVDQHGRKMSKSLGNGIEP 1887
PADL+L G + +R F S + + M P K+ HG+ + +G+K+SKSLGN I+P
Sbjct: 252 PADLHLIGKEINR--FHSIIWPAMLMSVGLPLPKKVFAHGW-LTVNGQKISKSLGNAIDP 308
Query: 1888 QDIIKTLGADILRLWI-------ASTDYSNEMSLSQEILKRTTDAYRRIRNTARFLLGNL 2046
+ +K G D++R ++ D+S E + + D + +
Sbjct: 309 RFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLLHRITAMIKKYF 368
Query: 2047 HGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNF 2202
+G L S D W+ R FE + Y E + I F
Sbjct: 369 NG-----RLPSPSAQEGFDSWLKERFFETKDAYHELMDSYRLTEALDKIWEF 415
Score = 43.8 bits (101), Expect = 0.007
Identities = 36/142 (25%), Positives = 60/142 (41%)
Frame = +1
Query: 178 YANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLD 357
Y N + H+G A I+ DII + K G+D ++ G D HG + A
Sbjct: 11 YVNSEPHIGSAYTTIVADIIARYKRFMGYDVFFLTGTDEHGQKVLQA------------- 57
Query: 358 AVQFRQKCREYAAEQIQLQRRDFKRLGIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHL 537
A Q + +E+ E + +R +K L I D+ +T D +AK+ + G +
Sbjct: 58 AQQAGKDPQEFCDELAEKFKRLWKELKITNDYF--IRTTDEMHMKTVQEFVAKMKENGDV 115
Query: 538 IRGTKPVHWCFDCGSALAEAEI 603
+G +C C + E E+
Sbjct: 116 YKGIYKGWYCVPCETFWNEDEV 137
>gi|2983551 (AE000721) cysteinyl-tRNA synthetase [Aquifex aeolicus]
Length = 495
Score = 50.0 bits (117), Expect = 1e-04
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +1
Query: 1801 PYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEI 1980
P+ + H V G+KMSKSLGN + +++ D+LRL + T Y + + S E
Sbjct: 249 PFARYWMHNGLVTVGGQKMSKSLGNYVTLREVYTKYHPDVLRLLVLFTHYRSPLDFSWEK 308
Query: 1981 LKRTTDAYRRIRN 2019
++ T AY R++N
Sbjct: 309 MEETLKAYERLKN 321
>gi|549024|sp|Q06752|SYC_BACSU CYSTEINYL-TRNA SYNTHETASE
(CYSTEINE--TRNA LIGASE) (CYSRS) >gi|541406|pir||C53402
cysteine--tRNA ligase (EC 6.1.1.16) - Bacillus subtilis
>gi|289284 (L14580) cysteinyl-tRNA synthetase [Bacillus
subtilis] >gi|467482|dbj|BAA05328| (D26185)
cysteinyl-tRNA synthetase [Bacillus subtilis]
>gi|499303|emb|CAA52167| (X73989) cysteine--tRNA ligase
[Bacillus subtilis] >gi|2632361|emb|CAB11870| (Z99104)
cysteinyl-tRNA synthetase [Bacillus subtilis]
Length = 466
Score = 49.6 bits (116), Expect = 1e-04
Identities = 30/112 (26%), Positives = 58/112 (51%)
Frame = +1
Query: 1681 AVLLERGLPKPADLYLEGADQHRGWFQSSLLTGVAMDNAAPYKQCLTHGFTVDQHGRKMS 1860
+ ++++ L D++ G D ++ + A+ K L +G+ ++ KMS
Sbjct: 210 SAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGY-INIDNEKMS 268
Query: 1861 KSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIR 2016
KSLGN + DIIK +LR ++ S Y + ++ S+E+L+ T A+ R++
Sbjct: 269 KSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTKSAFSRLK 320
>gi|3219297|dbj|BAA28843| (AB008529) Valyl tRNA Synthetase
[Trichomonas vaginalis]
Length = 368
Score = 49.2 bits (115), Expect = 2e-04
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Frame = +1
Query: 1897 IKTLGADILRLWIASTDYSNEMS-LSQEILKRTTDAYRRIRNTARFLLGNLHGFDPTLHL 2073
I G D +RL + S +N + L+ ++ + ++ N RF L N F+P
Sbjct: 24 IPQCGTDAMRLALCSFAGANRTANLNVSVIVSYRNFCNKMWNAVRFALPNFDKFNPEDSH 83
Query: 2074 VPL--SDMIALDRWIVHRAFELQQTIKAAYTRYDFAEIVQTILNFCSVDLGSLYLDVTKD 2247
L S LD+W + + + A + A+ V + +F + S+YL+ K
Sbjct: 84 KDLDASKTTPLDKWALKKLSLAIKAATAGLQDFKMADAVNGMTHFFHDEFCSVYLEGIKP 143
Query: 2248 RLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFTADELWSYLP 2385
+DA + +Y + +R + P + + +ELW +LP
Sbjct: 144 --IVNGDDAAAKEVVAAVLYECIESTMRMLHPFMPYVTEELWQHLP 187
>gi|2983692 (AE000731) methionyl-tRNA synthetase alpha subunit
[Aquifex aeolicus]
Length = 497
Score = 48.8 bits (114), Expect = 2e-04
Identities = 44/134 (32%), Positives = 80/134 (58%), Gaps = 16/134 (11%)
Frame = +1
Query: 1651 VWFDSGITHEAVLLER-GLPKPADLYLEGADQ---HRGWFQSSLLTGVAMDNAAPYKQCL 1818
VWFD+ + + L ++ + PADL+L G D H ++ + L++ + P K+
Sbjct: 229 VWFDALFNYISALEDKVEIYWPADLHLVGKDILRFHTVYWPAFLMS---LGYELP-KKVF 284
Query: 1819 THGF-TVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWI-------ASTDYSNEMSLSQ 1974
HG+ TV+ G+KMSK+LGN ++P ++++ G D +R ++ D+S + L++
Sbjct: 285 AHGWWTVE--GKKMSKTLGNVVDPYEVVQEYGLDEVRYFLLREVPFGQDGDFSKKAILNR 342
Query: 1975 ---EILKRTTDAYRRIRNTA-RFLLGNLHG 2052
E+ + Y R+ N A +FL G + G
Sbjct: 343 INGELANEIGNLYSRVVNMAHKFLGGEVSG 372
Score = 37.5 bits (85), Expect = 0.55
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +1
Query: 178 YANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVT 351
Y N HLGHA I D I + L +D ++ G D HGL I+KK ++G++
Sbjct: 15 YVNDVPHLGHAYTTIAADTIARYYRLRDYDVFFLTGTDEHGL----KIQKKAEELGIS 68
>gi|1314302 (U41072) isoleucyl-tRNA synthetase [Staphylococcus
aureus]
Length = 31
Score = 48.8 bits (114), Expect = 2e-04
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREPAILERW 99
DYK TL +P TDFPMRG LP +EP I E+W
Sbjct: 2 DYKETLLMPKTDFPMRGGLPNKEPQIQEKW 31
>gi|2501033|sp|Q55729|SYM_SYNY3 METHIONYL-TRNA SYNTHETASE
(METHIONINE--TRNA LIGASE) (METRS)
>gi|1001640|dbj|BAA10371| (D64002) methionyl-tRNA
synthetase [Synechocystis sp.]
Length = 532
Score = 48.4 bits (113), Expect = 3e-04
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Frame = +1
Query: 1651 VWFDSGITHEAVLLER--------GLPK--PADLYLEGADQ---HRGWFQSSLLTGVAMD 1791
VWFD+ + + LL+ L K P +L+L G D H ++ + L++ +
Sbjct: 230 VWFDALLGYVTALLDEDEEPNLTNALVKWWPINLHLIGKDILRFHAVYWPAMLMSA---E 286
Query: 1792 NAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLGADILRLW-IASTDYSNEMSL 1968
A P Q HGF + + G+KM KSLGN ++P D+I G D R + + ++ +
Sbjct: 287 LAIP-AQVFGHGF-LTKDGQKMGKSLGNTVDPLDLINRYGEDAFRYYFLKEIEFGKDGDF 344
Query: 1969 SQE--ILKRTTDAYRRIRNTARFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQT 2142
+++ + D + N LG + + ++ +A D + L +
Sbjct: 345 NEQRFVNVLNADLANDLGNLLNRTLGMVKKYCQGQGPQVMATDLAPDNPLKALGSHLGEE 404
Query: 2143 IKAAYTRYDFAEIVQTILNFCSVDLGSLYLD 2235
+ +AY R F + + I F V G+ Y+D
Sbjct: 405 VSSAYERLSFTDACEAI--FTLVRAGNKYID 433
Score = 36.4 bits (82), Expect = 1.2
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 178 YANGQIHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIE 324
Y N HLG A ++ D + + K L G+D I G D HG I+ E
Sbjct: 17 YVNDVPHLGSAYTTVVADTLARFKRLQGYDVLMITGTDEHGQKIQRTAE 65
>gi|5105279|dbj|BAA80592.1| (AP000062) 475aa long hypothetical
cysteinyl-tRNA synthetase [Aeropyrum pernix]
Length = 475
Score = 48.4 bits (113), Expect = 3e-04
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 1846 GRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIRNTA 2025
G KMSKSLGN I ++ ++ G LRLW+ S+ Y + + S+E L + Y R+R A
Sbjct: 265 GEKMSKSLGNIIPLREALREWGPGPLRLWLLSSHYRSNLDYSEEALGQYRRLYERLRQAA 324
Query: 2026 RFLLGNLHGFDP 2061
+ L +P
Sbjct: 325 DSIGRRLERAEP 336
>gi|1085432|pir||S55315 mucin (clone PGM-2A) - pig
>gi|2136504|pir||I47141 gastric mucin - pig (fragment)
>gi|915208 (U10281) gastric mucin [Sus scrofa]
Length = 528
Score = 48.4 bits (113), Expect = 3e-04
Identities = 95/536 (17%), Positives = 166/536 (30%), Gaps = 12/536 (2%)
Frame = +2
Query: 1178 ISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCAQPP 1357
IS +P+ S+P S S + P + +P S + P + ++ + PP
Sbjct: 2 ISVQPSSSSSSPTTSTTSVQSSSSSSVPIPSTTSVQPSSSGSAPTTSATSVQTSSSSSPP 61
Query: 1358 SRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHAA----P 1525
+ S +AP + ++ PI + P
Sbjct: 62 IS---STISVQTSSSSSVPTTSTTSVQPSSSSSAPTTRATSVQSSSSSSAPISSTTSVQP 118
Query: 1526 H*CAKLPTASNNR---ASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLS 1696
+PT S +S+S P T ++++P ++ PIS T + P+S + + S
Sbjct: 119 SSSGSVPTTSATSVQSSSSSSAPTTSA--TSVQPSSSSSPPISSTVSVQPSSSSSAPTTS 176
Query: 1697 AASLNPLTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAM 1876
A S+ P +S+S ++ + +
Sbjct: 177 ATSVQPSSSSSPPISSTVSVQTSSSSSVPTTSTTSVQPSSSSSVPTTSATSVRSS---SS 233
Query: 1877 ESNPRTSSRHWAPTSCVCGLPPPTTATKC-PSPKRXXXXXXXXXXXXXXXXXXXXXXCMA 2053
S P S+ P+S P T+AT PS +
Sbjct: 234 SSTPIPSTTSVQPSS--SSSAPTTSATSVQPSSSSSTPIPSTTSVQPSSSSSAPTTSATS 291
Query: 2054 LTPPYTSCP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXX 2233
+ P +S SP I+ + + +S+ S + + P SS
Sbjct: 292 VQPSSSS------SPPISSTISVQPSSSSSSPTTSTTSVQPSSSGSAPTTSATSVQPSSS 345
Query: 2234 XXPKIVSTQCAKTPPVAAPHRPPCTISPPPLSDGSPP----YSASPLTNXXXXXXXXXXX 2401
P I ST + P ++ T S P S GS P S P ++
Sbjct: 346 SSPPISST-ISVQPSSSSSSPTTSTTSVQPSSSGSAPTTSATSVQPSSSSSVPTTSATSV 404
Query: 2402 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVTTSPKYWNPCAPTALLAPH*KQKSXXXX 2581
V TS P T + P +
Sbjct: 405 RSSSSSSTPIPTTTSVQPSSSSSVPTTSATSVQTSSSSSTPIPSTTSVQPSSSSSAPTTS 464
Query: 2582 XXXXXXAGNHSPKNSASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPAAGITVPT*ALTQ 2761
+ + SP S S++ V+ P +S S+P P++ + PT + T
Sbjct: 465 ATSVQPSSSSSPPIS-STISVQ--------PSSSSSSPTTSTTSVQPSSSGSAPTTSATS 515
Query: 2762 PIPNSADA 2785
P+S+ +
Sbjct: 516 VQPSSSSS 523
Score = 37.5 bits (85), Expect = 0.55
Identities = 46/202 (22%), Positives = 78/202 (37%)
Frame = +2
Query: 1139 QPHHSVN*HWPACISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSG 1318
QP S + + S +P+ STP S S P T A + +P S +PP
Sbjct: 245 QPSSSSSAPTTSATSVQPSSSSSTPIPSTTSVQPSSSSSAPTTSATSVQPSSSSSPPI-- 302
Query: 1319 SSLWNKRPCAQPPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVT 1498
SS + +P + S P+ + S + P +S + +
Sbjct: 303 SSTISVQP-SSSSSSPTTSTTSVQPSSSGSAPTTSATSVQPSSSSSPPISSTISVQPSSS 361
Query: 1499 AEHPIHAAPH*CAKLPTASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPT 1678
+ P + + P++S + +TS T +P+ S+ P + S S +S P T
Sbjct: 362 SSSPTTST---TSVQPSSSGSAPTTSATS-VQPSSSSSVPTTSATSVRSSSSSSTPIPTT 417
Query: 1679 KQCSLSAASLNPLTSTSKVPTN 1744
S++S P TS + V T+
Sbjct: 418 TSVQPSSSSSVPTTSATSVQTS 439
Score = 36.0 bits (81), Expect = 1.6
Identities = 72/427 (16%), Positives = 121/427 (27%), Gaps = 4/427 (0%)
Frame = +2
Query: 1550 ASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASLNPLTSTS 1729
+S++ + T+ T + + S+ PI + S +SG P + S++S P++ST
Sbjct: 7 SSSSSSPTTSTTSVQSSSSSSVPIPSTTSVQPSSSGSAPTTSATSVQTSSSSSPPISSTI 66
Query: 1730 KVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRTSSRHW 1909
V T+ S P +S+
Sbjct: 67 SVQTSSSSSVPTTSTTSVQPSSSSSAPTTRATSVQSSSSS----------SAPISSTTSV 116
Query: 1910 APTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSCP*AT 2089
P+S G P T+AT S P +S
Sbjct: 117 QPSSS--GSVPTTSATSVQSSSSSSAPTTSATSVQPSSSSSPPISSTVSVQPSSSSS--- 171
Query: 2090 *SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVSTQCAK 2269
+P + + P +S+ P T SS P +T
Sbjct: 172 -APTTSATSVQPSSSSSPPISSTVSVQTSSSSSVPTTSTTSVQPSSSSSVPTTSATSVRS 230
Query: 2270 TPPVAAPHRPPCTISPPPLSDGSPPY----SASPLTNXXXXXXXXXXXXXXXXXXXXXXX 2437
+ + P P T S P S S P S P ++
Sbjct: 231 SSSSSTPI--PSTTSVQPSSSSSAPTTSATSVQPSSSSSTPIPSTTSVQPSSSSSAPTTS 288
Query: 2438 XXXXXXXXXXXXXXXXXXCVTTSPKYWNPCAPTALLAPH*KQKSXXXXXXXXXXAGNHSP 2617
V S +P T + P + + + SP
Sbjct: 289 ATSVQPSSSSSPPISSTISVQPSSSSSSPTTSTTSVQPSSSGSAPTTSATSVQPSSSSSP 348
Query: 2618 KNSASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPAAGITVPT*ALTQPIPNSADAASPT 2797
S S++ V+ P +S S+P P++ + PT + T P+S+ + T
Sbjct: 349 PIS-STISVQ--------PSSSSSSPTTSTTSVQPSSSGSAPTTSATSVQPSSSSSVPTT 399
Query: 2798 LTDQENSAIGS 2830
S+ S
Sbjct: 400 SATSVRSSSSS 410
>gi|6459435|gb|AAF11225.1|AE002009_5 (AE002009) cysteinyl-tRNA
synthetase [Deinococcus radiodurans]
Length = 532
Score = 47.6 bits (111), Expect = 5e-04
Identities = 30/101 (29%), Positives = 45/101 (43%)
Frame = +1
Query: 1846 GRKMSKSLGNGIEPQDIIKTLGADILRLWIASTDYSNEMSLSQEILKRTTDAYRRIRNTA 2025
G KMSKS GN QDI+K ++R + S+ Y + +++E + YRR+ T
Sbjct: 323 GEKMSKSKGNFTTIQDILKKYDPMVVRFLLVSSHYRSVTEMNEEAFASAANGYRRLSET- 381
Query: 2026 RFLLGNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIK 2148
LH + L P ALD I R E + ++
Sbjct: 382 ------LHEIERRLKDAPAGSDTALDSKIAARVTEFEDAMR 416
>gi|5420387|emb|CAB46679.1| (AJ243459) proteophosphoglycan [Leishmania
major]
Length = 873
Score = 47.3 bits (110), Expect = 6e-04
Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 5/191 (2%)
Frame = +2
Query: 1169 PACISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLW-----N 1333
P+ S S+ S +SS P + P A ++ P S + PS SS +
Sbjct: 654 PSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 713
Query: 1334 KRPCAQPPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPI 1513
P A S PS + S +AP +S +
Sbjct: 714 SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS------SSAPSASS 767
Query: 1514 HAAPH*CAKLPTASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSL 1693
+AP + P+AS++ A +S + S+ P ++ S S +S P+S +
Sbjct: 768 SSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPS 827
Query: 1694 SAASLNPLTSTSKVPT 1741
+++S P +S+S P+
Sbjct: 828 ASSSSAPSSSSSSAPS 843
>gi|1351163|sp|Q09828|SYLM_SCHPO PUTATIVE LEUCYL-TRNA SYNTHETASE,
MITOCHONDRIAL PRECURSOR (LEUCINE--TRNA LIGASE)
>gi|2130436|pir||S62486 hypothetical protein SPAC4G8.09
- fission yeast (Schizosaccharomyces pombe)
>gi|1022354|emb|CAA91210.1| (Z56276) putative leucyl
trna synthetase [Schizosaccharomyces pombe]
Length = 874
Score = 46.1 bits (107), Expect = 0.001
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 3/175 (1%)
Frame = +1
Query: 82 AILERWER--DDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIKSKHL 255
AI E W+ Y ++ + KG+ ++L P Y +G +H+GH + DI+ + +
Sbjct: 36 AIAENWKSYWKSHYPFVK-NDKGKKKYILSMFP-YPSGLLHIGHVRVYTISDILSRYYRM 93
Query: 256 DGFDAPYIPGWDCHGLPIEIAIEKKYGKVGVTLDAVQFRQKCREYAAEQIQLQRRDFKRL 435
G+ + GWD GLP E A A++ + E I+ + +
Sbjct: 94 KGYKVIHPMGWDAFGLPAENA-------------AIENGISASSWTYENIKKMKEQTYHM 140
Query: 436 GIIGDWDAPYKTLDFRFEADEIRALAKIVDKGHLIRGTKPVHW-CFDCGSALAEAEIE 606
I DWD T + + ++ KG + V+W DC + LA +++
Sbjct: 141 NIYFDWDREISTCNPDYYKWSQYLFLQMFHKGLAYQAEATVNWDPVDC-TVLANEQVD 197
Score = 45.7 bits (106), Expect = 0.002
Identities = 58/167 (34%), Positives = 87/167 (51%), Gaps = 64/167 (38%)
Frame = +1
Query: 1435 DWTISRQRTWGVPIPLFVHRHSGA-PHPRSAALMR-QVADRVEQQG------VDIWYSLD 1590
DW ISRQR WG PIP+ GA P P S ++ D++ ++G ++ W
Sbjct: 429 DWLISRQRFWGTPIPMVHCETCGAVPVPESELPVKLPDLDKIYEKGTSPLSNLETWMKTT 488
Query: 1591 QTELLGTEADQYEKITDILDVWFDSGITHEAVL------LERGLPK-----PADLYLEGA 1737
+ G + TD +D + DS + L L GL P D+Y+ G
Sbjct: 489 CPKCHGPATRE----TDTMDTFVDSSWYYFRFLDSKNSELPVGLASASSLMPVDIYIGGV 544
Query: 1738 DQH-----RGWFQSSLLTGVAMDNA-----APYKQCLT----HGFT-------------- 1833
+ F S + + + N P+ Q +T HG T
Sbjct: 545 EHSILHLLYSRFFSKFMKDIGLWNGDKYLNEPFTQLITQGMVHGLTYTTMSDERILNPKE 604
Query: 1834 -----------------VDQHGRKMSKSLGNGIEPQDIIKTLGADILRLWI 1935
V +KMSKS NG++P I+ G+DI+R +I
Sbjct: 605 VQKIGDEYFLISNPKEKVQLSYQKMSKSKHNGVDPIRTIQKYGSDIIRAYI 655
>gi|6226710|sp|Q09996|SYLC_CAEEL PROBABLE LEUCYL-TRNA SYNTHETASE
(LEUCINE--TRNA LIGASE) (LEURS)
>gi|3874391|emb|CAA86751.1| (Z46787) similar to
leucyl-tRNA synthetase; cDNA EST EMBL:D64208 comes from
this gene; cDNA EST EMBL:D65056 comes from this gene;
cDNA EST EMBL:D68348 comes from this gene; cDNA EST
yk377h12.3 comes from this gene; cDNA EST y...
>gi|3879166|emb|CAA85280.1| (Z36238) similar to
leucyl-tRNA synthetase; cDNA EST EMBL:D64208 comes from
this gene; cDNA EST EMBL:D65056 comes from this gene;
cDNA EST EMBL:D68348 comes from this gene; cDNA EST
yk377h12.3 comes from this gene; cDNA EST y...
Length = 1186
Score = 45.7 bits (106), Expect = 0.002
Identities = 26/88 (29%), Positives = 44/88 (49%)
Frame = +1
Query: 64 LPKREPAILERWERDDFYAQLRAHAKGRPLFLLHDGPPYANGQIHLGHAVNKILKDIIIK 243
L + E +I E WE + + A G+P +L+ PY NG++HLGH + +
Sbjct: 14 LQEIEKSIQELWESKKAF-EADARDDGKPKYLVTFPFPYMNGRLHLGHTFSASKCEFAAG 72
Query: 244 SKHLDGFDAPYIPGWDCHGLPIEIAIEK 327
+ L G + + G+ C G+PI+ +K
Sbjct: 73 FQRLQGKEVLFPFGFHCTGMPIKACADK 100
>gi|1074944|pir||A64105 isoleucine--tRNA ligase (EC 6.1.1.5) -
Haemophilus influenzae (strain Rd KW20) (fragment)
Length = 29
Score = 44.5 bits (103), Expect = 0.004
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREP 81
DYK TL+LP T FPMRGDL KREP
Sbjct: 4 DYKNTLNLPETSFPMRGDLAKREP 27
>gi|2388584 (AC000098) EST gb|ATTS1136 comes from this gene.
[Arabidopsis thaliana]
Length = 402
Score = 43.8 bits (101), Expect = 0.007
Identities = 58/266 (21%), Positives = 84/266 (30%), Gaps = 10/266 (3%)
Frame = +2
Query: 1547 TASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASLNPLTST 1726
TAS+ ++++ + T + S+ K S IS T+ A+PT S S +S + ST
Sbjct: 92 TASSTASTSTSSYSTSYSTSSTKTTTMTGSTISTTAS---AAPTSTASTSTSSYSTSYST 148
Query: 1727 SKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRTSSRH 1906
S T +NP + S+
Sbjct: 149 SSTKTTTVTGSTIGTTASAAPTSTSTSTANSSASST---------------TNPSSGSKP 193
Query: 1907 WAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSCP*A 2086
A T TTA PS + T TS +
Sbjct: 194 TAMTG--------TTANTSPSAPTSSPSTTNSSSTAAYTSSGSKPTTVTRTTANTSSSAS 245
Query: 2087 T*SPWIAGSFTA-PLNSNRPSKPPTPV--------TTLPKSSKQYXXXXXXXXXXXXXXX 2239
T S S T+ P NS+ SKP T TT S+
Sbjct: 246 TSSASPTNSSTSTPTNSSAGSKPTTMTGTTTNTSSTTTTSSASTTKSSSSSATNSSSGSK 305
Query: 2240 PKIVSTQCAKTPPVAAP-HRPPCTISPPPLSDGSPP 2344
P +ST A T ++P P T + P + +PP
Sbjct: 306 PSTLSTTTAYTATTSSPTAEPSTTTASKPATSSTPP 341
>gi|406454 (U02196) Homology to isoleucyl-tRNA synthetase M30942
[Mycoplasma genitalium]
Length = 110
Score = 43.0 bits (99), Expect = 0.013
Identities = 23/74 (31%), Positives = 42/74 (56%)
Frame = +1
Query: 910 KGAAMEQHILAHPFYPDRTIPLLLGNHVSAEDGTGAVHTAPGHGQEDHQVFQQYGLLNHY 1089
KG+ ++ +H FY ++ +P+L+G HV +GTG VH++P G +D + Q+ +
Sbjct: 26 KGSNLKNSSYSHCFY-NKVLPVLMGIHVVDNEGTGIVHSSPAFGIDDFYLCQKNKI---- 80
Query: 1090 SAAELNPVDARGVY 1131
L +D +GV+
Sbjct: 81 -KEVLISIDEKGVF 93
>gi|188864 (M74027) mucin [Homo sapiens]
Length = 573
Score = 43.0 bits (99), Expect = 0.013
Identities = 81/373 (21%), Positives = 111/373 (29%), Gaps = 6/373 (1%)
Frame = +2
Query: 1241 PLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCAQPPSRPSHTXXXXXXXXXXXXXXX 1420
P+ I TP T P +PPP+ ++ P + PS
Sbjct: 49 PMDKCITTPSPPTTTP----SPPPTSTTT------LPPTTTPSPPTTTTTTPPPTTTPSP 98
Query: 1421 XXXXXXGPSPDNAPGASRFPCLYTVTAEHPIH--AAPH*CAKLPTASNNRASTSGT---P 1585
P P P P + T T P + P PT + + +T+ T P
Sbjct: 99 PITTTTTPPPTTTPS----PPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPP 154
Query: 1586 WTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASLNPLTSTSKVPTNXXXXXXX 1765
T P+ PI S +L P+ PT + + P T+T PT
Sbjct: 155 TTTPSPPTTTPITPPASTTTLPPTTTPSPPT-----TTTTTPPPTTTPSPPTTTPIT--- 206
Query: 1766 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRTSSRHWAPTSCVCGLPPP 1945
P TS+ PT+ PPP
Sbjct: 207 ----------------------------------------PPTSTTTLPPTTTPS--PPP 224
Query: 1946 TTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSCP*AT*SPWIAGSFTAP 2125
TT T P +PP T+ P SP + T P
Sbjct: 225 TTTTTPPPTTTP-------------------------SPPTTTTP----SPPTITTTTPP 255
Query: 2126 LNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVSTQCAKTPPVAAPHRPPC 2305
+ PS P T TT P ++ P T PP P PP
Sbjct: 256 PTTT-PSPPTTTTTTPPPTTTP----------SPPTTTPITPPTSTTTLPPTTTPSPPPT 304
Query: 2306 TIS-PPPLSDGSPPYSASP 2359
T + PPP + SPP + +P
Sbjct: 305 TTTTPPPTTTPSPPTTTTP 323
Score = 40.6 bits (93), Expect = 0.064
Identities = 52/229 (22%), Positives = 67/229 (28%), Gaps = 10/229 (4%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHP--TP 184
TT PP P P + T P PS + TT P P P S++TT P TP
Sbjct: 72 TTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSP---PISTTTTPPPTTTP 128
Query: 185 MARSTLAMXXXXXXXXXXXXXXXXMALTHP--------TSPAGIATACRLKLPLKKNTAK 340
+T T P T PA T P T
Sbjct: 129 SPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTT 188
Query: 341 SA*PWMPSNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKS 520
+ P + S P T P + P P P +
Sbjct: 189 TTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPT 248
Query: 521 LTKAT*SVVPNQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTPHSP 697
+T T + TP+ P T P TP+P P +TP +P
Sbjct: 249 ITTTT-------------------PPPTTTPSPPTTTTTTPPPTTTPSP--PTTTPITP 286
Score = 40.2 bits (92), Expect = 0.084
Identities = 89/400 (22%), Positives = 118/400 (29%), Gaps = 4/400 (1%)
Frame = +2
Query: 1169 PACISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCA 1348
P PT +TP + S PP I P + T PP + PP+ ++ P
Sbjct: 138 PTTTPSPPTTTTTTPPPTTTPS-PPTTTPITPPASTTTLPPTTTPSPPTTTT--TTPPPT 194
Query: 1349 QPPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHAAPH 1528
PS P+ T PSP + P T T P P
Sbjct: 195 TTPSPPTTTPITPPTSTTTLPPTTT------PSPPPTTTTTPPP---TTTPSPPTTTTP- 244
Query: 1529 *CAKLPTASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASL 1708
PT + + TP + P T SP + T P S T + S
Sbjct: 245 ---SPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSP 301
Query: 1709 NPLTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNP 1888
P T+T+ PT P + P
Sbjct: 302 PPTTTTTPPPTTTPSPPTTTTPS---------------------------PPITTTTTPP 334
Query: 1889 RTSSRHWAPTSCVCGLP-PPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPP 2065
T++ P+S + P PPTT PSP TP
Sbjct: 335 PTTT----PSSPITTTPSPPTTTMTTPSPTTTPSSPITTTT----------------TPS 374
Query: 2066 YTSCP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPK 2245
T+ P SP + T P + PS P T +TTLP P
Sbjct: 375 STTTP----SP-PPTTMTTPSPTTTPSPPTTTMTTLP---------------------PT 408
Query: 2246 IVSTQCAKTPPVAAPHRPPCTISPP---PLSDGSPPYSASPLTN 2368
S+ TP P +I+PP P S +P PL N
Sbjct: 409 TTSSPLTTTP-------LPPSITPPTFSPFSTTTPTTPCVPLCN 445
Score = 37.1 bits (84), Expect = 0.72
Identities = 62/299 (20%), Positives = 85/299 (27%), Gaps = 5/299 (1%)
Frame = +2
Query: 1907 WAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSCP*A 2086
W C+ PPTT PSP TPP T+ P
Sbjct: 48 WPMDKCITTPSPPTTT---PSPPPTSTTTLPPTTTPSPPTTTTT------TPPPTTTP-- 96
Query: 2087 T*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVSTQCA 2266
SP I + T P + PS P + TT P ++ P +T
Sbjct: 97 --SPPITTTTTPPPTTT-PSPPISTTTTPPPTT-----------------TPSPPTT--T 134
Query: 2267 KTPPVAAPHRP-PCTISPPPLSDGSPPYSASPLTNXXXXXXXXXXXXXXXXXXXXXXXXX 2443
+PP P P T +PPP + SPP + +P+T
Sbjct: 135 PSPPTTTPSPPTTTTTTPPPTTTPSPP-TTTPITPPASTTTLPPTTTPSPPTTTTTTPPP 193
Query: 2444 XXXXXXXXXXXXXXXXCVTTSPKYWNPCAPTALLAPH*KQKSXXXXXXXXXXAGNHSPKN 2623
TT P P P + +
Sbjct: 194 TTTPSPPTTTPITPPTSTTTLPPTTTPSPP----------PTTTTTPPPTTTPSPPTTTT 243
Query: 2624 SASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPA----AGITVPT*ALTQPIPNSADAAS 2791
+ + +P P TP + PP P+ IT PT T P P + +
Sbjct: 244 PSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP-PTTTPSPP 302
Query: 2792 PTLT 2803
PT T
Sbjct: 303 PTTT 306
Score = 35.6 bits (80), Expect = 2.1
Identities = 36/175 (20%), Positives = 50/175 (28%), Gaps = 3/175 (1%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMA 190
TT PP P P + T P PS T + +P S T TP
Sbjct: 252 TTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 311
Query: 191 RSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATA---CRLKLPLKKNTAKSA*PWMP 361
+T + T P+SP + + P T S P
Sbjct: 312 TTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSS--PITT 369
Query: 362 SNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKSLTKAT 535
+ + + P T T P + P+ PLP S+T T
Sbjct: 370 TTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPT 427
Score = 34.0 bits (76), Expect = 6.3
Identities = 50/229 (21%), Positives = 69/229 (29%), Gaps = 11/229 (4%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTT---STHNCAPMPKAAPCSSSTTAHP- 178
TT PP P P + T P PS T ST P +P ++TT P
Sbjct: 173 TTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 232
Query: 179 ----TPMARSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATACRLKLPLKKNTAKSA 346
+P +T + T T P + P+ T+ +
Sbjct: 233 TTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 292
Query: 347 *PWMPSNSAKNAVNTLPNRXXXXXXXXXXXXX---XXXGTPPTKPLISALKPMKYAPLPK 517
P + S T P TPP P + P+ P P
Sbjct: 293 LPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP--PTTTPSSPITTTPSPP 350
Query: 518 SLTKAT*SVVPNQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTPHSP 697
+ T T S + TP+ P+ T P TP+P T SP
Sbjct: 351 TTTMTTPSP-------------------TTTPSSPITTTTTPSSTTTPSPPPTTMTTPSP 391
>gi|5420389|emb|CAB46680.1| (AJ243460) proteophosphoglycan [Leishmania
major]
Length = 383
Score = 42.6 bits (98), Expect = 0.017
Identities = 42/186 (22%), Positives = 71/186 (37%)
Frame = +2
Query: 1172 ACISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCAQ 1351
A S P+ S P AS SS P A + ++ P S + PS SS + P +
Sbjct: 13 ASSSSAPSSSSSAPSAS--SSSAPSSSSSAPSASSSSAPSSSSSSAPSASS--SSAPSSS 68
Query: 1352 PPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHAAPH* 1531
S PS + S + +S P + +AP
Sbjct: 69 SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 128
Query: 1532 CAKLPTASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASLN 1711
+ P+AS++ A +S + S+ P ++ S S +S P+S + +++S
Sbjct: 129 SSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA 188
Query: 1712 PLTSTS 1729
P +S+S
Sbjct: 189 PSSSSS 194
Score = 37.1 bits (84), Expect = 0.72
Identities = 59/278 (21%), Positives = 94/278 (33%)
Frame = +2
Query: 872 ATASPNCSSMAAPKEPPWSSTSWPTRFIPIAPSPYCLATTFXXXXXXXXXXXXLXXXXXX 1051
++++P+ SS +AP SS+S P+ APS A +
Sbjct: 7 SSSAPSASSSSAPS----SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSS-----AP 57
Query: 1052 XXSFNNTDYSIXXXXXXXXXXXXXXXXXRQPHHSVN*HWPACISGKPTH*LSTPCASVAS 1231
S ++ S P A S P+ S P AS +S
Sbjct: 58 SASSSSAPSSSSSSAPSASSSSAPSSSSSAPS--------ASSSSAPSSSSSAPSAS-SS 108
Query: 1232 SLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCAQPPSRPSHTXXXXXXXXXXXX 1411
S P + P A ++ P S + PS SS + P + S PS +
Sbjct: 109 SAPSSSS--SAPSASSSSAPSSSSSAPSASS--SSAPSSSSSSAPSASSSSAPSSSSSSA 164
Query: 1412 XXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHAAPH*CAKLPTASNNRASTSGTPWT 1591
S +AP AS +AP + P+AS++ A +S +
Sbjct: 165 PSASSSSAPSSSSSSAPSASS-------------SSAPSSSSSAPSASSSSAPSSSSSSA 211
Query: 1592 KPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAAS 1705
S+ P ++ +P S +S PT L ++S
Sbjct: 212 PSASSSSAPSSSSSAP-SSSSTTTTMDPTPDPVLPSSS 248
>gi|2135765|pir||A43932 mucin 2 precursor, intestinal - human
(fragments)
Length = 3020
Score = 42.2 bits (97), Expect = 0.022
Identities = 59/264 (22%), Positives = 83/264 (31%), Gaps = 1/264 (0%)
Frame = +2
Query: 1568 STSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASLNPLTSTSKVPTNX 1747
+T+ P T P+ PI+T +P T+ P+ PT S + +P T+T+ P
Sbjct: 1445 TTTPLPTTTPS----PPISTTTTPPPTTT---PSPPTTTPSPPTTTPSPPTTTTTTPPPT 1497
Query: 1748 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRTSSRHWAPTSCV 1927
P +P T++ PTS
Sbjct: 1498 TTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPT---TTPSPPTTTPITPPTSTT 1554
Query: 1928 CGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSCP*AT*SPWIA 2107
LPP TT + P P TPP T+ P SP
Sbjct: 1555 T-LPPTTTPS--PPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTP----SPPTT 1607
Query: 2108 GSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVSTQCAKTPPVAA 2287
+ T P P+ P+P TT P + T PP
Sbjct: 1608 TTTTPP-----PTTTPSPPTTTPITPP----------------------TSTTTLPPTTT 1640
Query: 2288 PHRPPCTIS-PPPLSDGSPPYSASP 2359
P PP T + PPP + SPP + +P
Sbjct: 1641 PSPPPTTTTTPPPTTTPSPPTTTTP 1665
Score = 41.8 bits (96), Expect = 0.028
Identities = 52/229 (22%), Positives = 68/229 (28%), Gaps = 10/229 (4%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHP---- 178
TT PP P P + T P PS + TT P P P S++TT P
Sbjct: 1414 TTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSP---PISTTTTPPPTTTP 1470
Query: 179 -----TPMARSTLAMXXXXXXXXXXXXXXXXMALTHP-TSPAGIATACRLKLPLKKNTAK 340
TP +T +T P T PA T P T
Sbjct: 1471 SPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTT 1530
Query: 341 SA*PWMPSNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKS 520
+ P + S P T P + P P P +
Sbjct: 1531 TTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPT 1590
Query: 521 LTKAT*SVVPNQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTPHSP 697
+T T + TP+ P T P TP+P P +TP +P
Sbjct: 1591 ITTTT-------------------PPPTTTPSPPTTTTTTPPPTTTPSP--PTTTPITP 1628
Score = 41.4 bits (95), Expect = 0.037
Identities = 89/400 (22%), Positives = 119/400 (29%), Gaps = 4/400 (1%)
Frame = +2
Query: 1169 PACISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCA 1348
P PT +TP + S PP+ I P + T PP + PP+ ++ P
Sbjct: 1480 PTTTPSPPTTTTTTPPPTTTPS-PPMTTPITPPASTTTLPPTTTPSPPTTTT--TTPPPT 1536
Query: 1349 QPPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHAAPH 1528
PS P+ T PSP + P T T P P
Sbjct: 1537 TTPSPPTTTPITPPTSTTTLPPTTT------PSPPPTTTTTPPP---TTTPSPPTTTTP- 1586
Query: 1529 *CAKLPTASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASL 1708
PT + + TP + P T SP + T P S T + S
Sbjct: 1587 ---SPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSP 1643
Query: 1709 NPLTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNP 1888
P T+T+ PT P + P
Sbjct: 1644 PPTTTTTPPPTTTPSPPTTTTPS---------------------------PPITTTTTPP 1676
Query: 1889 RTSSRHWAPTSCVCGLP-PPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPP 2065
T++ P+S + P PPTT PSP TP
Sbjct: 1677 PTTT----PSSPITTTPSPPTTTMTTPSPTTTPSSPITTTT----------------TPS 1716
Query: 2066 YTSCP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPK 2245
T+ P SP + T P + PS P T +TTLP P
Sbjct: 1717 STTTP----SP-PPTTMTTPSPTTTPSPPTTTMTTLP---------------------PT 1750
Query: 2246 IVSTQCAKTPPVAAPHRPPCTISPP---PLSDGSPPYSASPLTN 2368
S+ TP P +I+PP P S +P PL N
Sbjct: 1751 TTSSPLTTTP-------LPPSITPPTFSPFSTTTPTTPCVPLCN 1787
Score = 41.0 bits (94), Expect = 0.049
Identities = 62/299 (20%), Positives = 84/299 (27%), Gaps = 13/299 (4%)
Frame = +2
Query: 1907 WAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSC--- 2077
W C+ PPTT T P P +PP T+
Sbjct: 1390 WPMDKCITTPSPPTT-TPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTP 1448
Query: 2078 -P*AT*SPWIAGSFTAPLNS--NRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKI 2248
P T SP I+ + T P + + P+ P+P TT P I
Sbjct: 1449 LPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI 1508
Query: 2249 VSTQCAKT-PPVAAPHRP-PCTISPPPLSDGSPPYSASPLTNXXXXXXXXXXXXXXXXXX 2422
T PP P P T +PPP + SPP +
Sbjct: 1509 TPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT 1568
Query: 2423 XXXXXXXXXXXXXXXXXXXXXXXCVTTSPKYWNPCAPTALLAPH*KQKSXXXXXXXXXXA 2602
TT P P PT +
Sbjct: 1569 TTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI-- 1626
Query: 2603 GNHSPKNSASSLLVEMSPLPRPT-----PMASLSAPNQPPKPNVPAAGITVPT*ALTQPI 2767
+P S ++L +P P PT P + +P P+ P T P T
Sbjct: 1627 ---TPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSS 1683
Query: 2768 PNSADAASPTLT 2803
P + + PT T
Sbjct: 1684 PITTTPSPPTTT 1695
Score = 35.6 bits (80), Expect = 2.1
Identities = 36/175 (20%), Positives = 50/175 (28%), Gaps = 3/175 (1%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMA 190
TT PP P P + T P PS T + +P S T TP
Sbjct: 1594 TTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1653
Query: 191 RSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATA---CRLKLPLKKNTAKSA*PWMP 361
+T + T P+SP + + P T S P
Sbjct: 1654 TTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSS--PITT 1711
Query: 362 SNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKSLTKAT 535
+ + + P T T P + P+ PLP S+T T
Sbjct: 1712 TTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPT 1769
Score = 34.0 bits (76), Expect = 6.3
Identities = 50/229 (21%), Positives = 69/229 (29%), Gaps = 11/229 (4%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTT---STHNCAPMPKAAPCSSSTTAHP- 178
TT PP P P + T P PS T ST P +P ++TT P
Sbjct: 1515 TTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1574
Query: 179 ----TPMARSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATACRLKLPLKKNTAKSA 346
+P +T + T T P + P+ T+ +
Sbjct: 1575 TTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1634
Query: 347 *PWMPSNSAKNAVNTLPNRXXXXXXXXXXXXX---XXXGTPPTKPLISALKPMKYAPLPK 517
P + S T P TPP P + P+ P P
Sbjct: 1635 LPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP--PTTTPSSPITTTPSPP 1692
Query: 518 SLTKAT*SVVPNQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTPHSP 697
+ T T S + TP+ P+ T P TP+P T SP
Sbjct: 1693 TTTMTTPSP-------------------TTTPSSPITTTTTPSSTTTPSPPPTTMTTPSP 1733
>gi|4505285|ref|NP_002448.1|| mucin 2, intestinal/tracheal
>gi|2506877|sp|Q02817|MUC2_HUMAN MUCIN 2 PRECURSOR
(INTESTINAL MUCIN 2) >gi|454154 (L21998) mucin [Homo
sapiens]
Length = 5179
Score = 42.2 bits (97), Expect = 0.022
Identities = 59/264 (22%), Positives = 83/264 (31%), Gaps = 1/264 (0%)
Frame = +2
Query: 1568 STSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASLNPLTSTSKVPTNX 1747
+T+ P T P+ PI+T +P T+ P+ PT S + +P T+T+ P
Sbjct: 1445 TTTPLPTTTPS----PPISTTTTPPPTTT---PSPPTTTPSPPTTTPSPPTTTTTTPPPT 1497
Query: 1748 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRTSSRHWAPTSCV 1927
P +P T++ PTS
Sbjct: 1498 TTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPT---TTPSPPTTTPITPPTSTT 1554
Query: 1928 CGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSCP*AT*SPWIA 2107
LPP TT + P P TPP T+ P SP
Sbjct: 1555 T-LPPTTTPS--PPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTP----SPPTT 1607
Query: 2108 GSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVSTQCAKTPPVAA 2287
+ T P P+ P+P TT P + T PP
Sbjct: 1608 TTTTPP-----PTTTPSPPTTTPITPP----------------------TSTTTLPPTTT 1640
Query: 2288 PHRPPCTIS-PPPLSDGSPPYSASP 2359
P PP T + PPP + SPP + +P
Sbjct: 1641 PSPPPTTTTTPPPTTTPSPPTTTTP 1665
Score = 41.8 bits (96), Expect = 0.028
Identities = 52/229 (22%), Positives = 68/229 (28%), Gaps = 10/229 (4%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHP---- 178
TT PP P P + T P PS + TT P P P S++TT P
Sbjct: 1414 TTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSP---PISTTTTPPPTTTP 1470
Query: 179 -----TPMARSTLAMXXXXXXXXXXXXXXXXMALTHP-TSPAGIATACRLKLPLKKNTAK 340
TP +T +T P T PA T P T
Sbjct: 1471 SPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTT 1530
Query: 341 SA*PWMPSNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKS 520
+ P + S P T P + P P P +
Sbjct: 1531 TTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPT 1590
Query: 521 LTKAT*SVVPNQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTPHSP 697
+T T + TP+ P T P TP+P P +TP +P
Sbjct: 1591 ITTTT-------------------PPPTTTPSPPTTTTTTPPPTTTPSP--PTTTPITP 1628
Score = 41.4 bits (95), Expect = 0.037
Identities = 89/400 (22%), Positives = 119/400 (29%), Gaps = 4/400 (1%)
Frame = +2
Query: 1169 PACISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCA 1348
P PT +TP + S PP+ I P + T PP + PP+ ++ P
Sbjct: 1480 PTTTPSPPTTTTTTPPPTTTPS-PPMTTPITPPASTTTLPPTTTPSPPTTTT--TTPPPT 1536
Query: 1349 QPPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHAAPH 1528
PS P+ T PSP + P T T P P
Sbjct: 1537 TTPSPPTTTPITPPTSTTTLPPTTT------PSPPPTTTTTPPP---TTTPSPPTTTTP- 1586
Query: 1529 *CAKLPTASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASL 1708
PT + + TP + P T SP + T P S T + S
Sbjct: 1587 ---SPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSP 1643
Query: 1709 NPLTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNP 1888
P T+T+ PT P + P
Sbjct: 1644 PPTTTTTPPPTTTPSPPTTTTPS---------------------------PPITTTTTPP 1676
Query: 1889 RTSSRHWAPTSCVCGLP-PPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPP 2065
T++ P+S + P PPTT PSP TP
Sbjct: 1677 PTTT----PSSPITTTPSPPTTTMTTPSPTTTPSSPITTTT----------------TPS 1716
Query: 2066 YTSCP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPK 2245
T+ P SP + T P + PS P T +TTLP P
Sbjct: 1717 STTTP----SP-PPTTMTTPSPTTTPSPPTTTMTTLP---------------------PT 1750
Query: 2246 IVSTQCAKTPPVAAPHRPPCTISPP---PLSDGSPPYSASPLTN 2368
S+ TP P +I+PP P S +P PL N
Sbjct: 1751 TTSSPLTTTP-------LPPSITPPTFSPFSTTTPTTPCVPLCN 1787
Score = 39.1 bits (89), Expect = 0.19
Identities = 59/299 (19%), Positives = 81/299 (26%), Gaps = 4/299 (1%)
Frame = +2
Query: 1907 WAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSCP*A 2086
W C+ PPTT PSP TPP T+ P
Sbjct: 1390 WPMDKCITTPSPPTTT---PSPPPTTTTTLPPTTTPSPPTTTTT------TPPPTTTP-- 1438
Query: 2087 T*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVSTQCA 2266
SP I + T PL + PS P + TT P ++
Sbjct: 1439 --SPPITTT-TTPLPTTTPSPPISTTTTPPPTT--------------------------T 1469
Query: 2267 KTPPVAAPHRPPCTISPPPLSDGSPPYSASPLTNXXXXXXXXXXXXXXXXXXXXXXXXXX 2446
+PP P P T SPP + +PP + +P
Sbjct: 1470 PSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTT 1529
Query: 2447 XXXXXXXXXXXXXXXCVTTSPKYWNPCAPTALLAPH*KQKSXXXXXXXXXXAGNHSPKNS 2626
T P PT +P + +
Sbjct: 1530 TTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSP---PPTTTTTPPPTTTPSPPTTTTP 1586
Query: 2627 ASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPA----AGITVPT*ALTQPIPNSADAASP 2794
+ + +P P TP + PP P+ IT PT T P P + + P
Sbjct: 1587 SPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP-PTTTPSPPP 1645
Query: 2795 TLT 2803
T T
Sbjct: 1646 TTT 1648
Score = 35.6 bits (80), Expect = 2.1
Identities = 36/175 (20%), Positives = 50/175 (28%), Gaps = 3/175 (1%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMA 190
TT PP P P + T P PS T + +P S T TP
Sbjct: 1594 TTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1653
Query: 191 RSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATA---CRLKLPLKKNTAKSA*PWMP 361
+T + T P+SP + + P T S P
Sbjct: 1654 TTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSS--PITT 1711
Query: 362 SNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKSLTKAT 535
+ + + P T T P + P+ PLP S+T T
Sbjct: 1712 TTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPT 1769
Score = 34.4 bits (77), Expect = 4.8
Identities = 59/300 (19%), Positives = 94/300 (30%), Gaps = 26/300 (8%)
Frame = +2
Query: 1445 SPDNAPGASRFPCLYTVTAEHPIHAAPH*CA-KLPTASNNRASTSGTPWTKPNYS---AL 1612
+P P ++ P +T + P + PT + +T+ TP P +
Sbjct: 3955 TPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTT 4014
Query: 1613 KPINTKKS--PISLTSGLIPASPTKQCSLSAASLNPLTSTSKVPTNXXXXXXXXXXXXXX 1786
PI T + P +G + T + + + P + ++ PT
Sbjct: 4015 TPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPT 4074
Query: 1787 XXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRTSSRHWAPTSCVCGLPPPTTA---- 1954
+ P T++ PT G PTT
Sbjct: 4075 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 4134
Query: 1955 ------TKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSCP*AT*SPWIAGS- 2113
T P+ + T P T+ T +P G+
Sbjct: 4135 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQ 4194
Query: 2114 -------FTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVSTQCA-- 2266
TAP+ S PP P ++ P++S+ P I T A
Sbjct: 4195 TGPPTHTSTAPIAELTTSNPP-PESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPP 4253
Query: 2267 KTPPVAAPHRPPCTISPPPLSDGSPP 2344
TP T+SPPP + SPP
Sbjct: 4254 STPTAPTTTSGGHTLSPPPSTTTSPP 4279
Score = 34.0 bits (76), Expect = 6.3
Identities = 50/229 (21%), Positives = 69/229 (29%), Gaps = 11/229 (4%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTT---STHNCAPMPKAAPCSSSTTAHP- 178
TT PP P P + T P PS T ST P +P ++TT P
Sbjct: 1515 TTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1574
Query: 179 ----TPMARSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATACRLKLPLKKNTAKSA 346
+P +T + T T P + P+ T+ +
Sbjct: 1575 TTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1634
Query: 347 *PWMPSNSAKNAVNTLPNRXXXXXXXXXXXXX---XXXGTPPTKPLISALKPMKYAPLPK 517
P + S T P TPP P + P+ P P
Sbjct: 1635 LPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP--PTTTPSSPITTTPSPP 1692
Query: 518 SLTKAT*SVVPNQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTPHSP 697
+ T T S + TP+ P+ T P TP+P T SP
Sbjct: 1693 TTTMTTPSP-------------------TTTPSSPITTTTTPSSTTTPSPPPTTMTTPSP 1733
>gi|1255319 (U51998) C12D12.1 gene product [Caenorhabditis elegans]
Length = 825
Score = 42.2 bits (97), Expect = 0.022
Identities = 56/229 (24%), Positives = 76/229 (32%), Gaps = 14/229 (6%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVN----RPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHP 178
T PP T V TS N S+ G++ TST AP A+P ++T H
Sbjct: 497 TNTPPANPTTATPTTVGTSKQTNTISPHLSTITGSIVTSTPTMAPQTSASP--TTTPTHT 554
Query: 179 TPMARSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATACRLKLPLKKNTAKSA*P-- 352
T +T T SP TA K + +T ++A P
Sbjct: 555 TASQPTTTKPVVTTNSVTPSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQTAPPVT 614
Query: 353 ---WMPSNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKSL 523
P + + + TL TPPT ++A K + S
Sbjct: 615 TPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSP 674
Query: 524 TKAT*S-----VVPNQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTP 688
T A S P +G A L + P P T P P P P + P
Sbjct: 675 TLAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPT--SPTTAP 732
Query: 689 HSP 697
P
Sbjct: 733 TVP 735
Score = 34.4 bits (77), Expect = 4.8
Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 5/185 (2%)
Frame = +2
Query: 1187 KPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCAQPPSRP 1366
KP ++ S ++ P+ +P T P P S+ P P S+P
Sbjct: 563 KPVVTTNSVTPSTGTTTVPVPTTTGSPTTQTTAPVTK--PTVPSSTTQTAPPVTTPTSQP 620
Query: 1367 SHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHA-----APH* 1531
T + + T T++ P+ AP
Sbjct: 621 PVTTTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTS 680
Query: 1532 CAKLPTASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASLN 1711
KLPT+ + TS T P+N S + T+ + P SPT +A ++
Sbjct: 681 PTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPT-----TAPTVP 735
Query: 1712 PLTSTSKVPT 1741
P+T+T+ T
Sbjct: 736 PVTTTTPTTT 745
>gi|186396 (M94131) mucin [Homo sapiens]
Length = 1270
Score = 42.2 bits (97), Expect = 0.022
Identities = 59/264 (22%), Positives = 83/264 (31%), Gaps = 1/264 (0%)
Frame = +2
Query: 1568 STSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASLNPLTSTSKVPTNX 1747
+T+ P T P+ PI+T +P T+ P+ PT S + +P T+T+ P
Sbjct: 820 TTTPLPTTTPS----PPISTTTTPPPTTT---PSPPTTTPSPPTTTPSPPTTTTTTPPPT 872
Query: 1748 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRTSSRHWAPTSCV 1927
P +P T++ PTS
Sbjct: 873 TTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPT---TTPSPPTTTPITPPTSTT 929
Query: 1928 CGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSCP*AT*SPWIA 2107
LPP TT + P P TPP T+ P SP
Sbjct: 930 T-LPPTTTPS--PPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTP----SPPTT 982
Query: 2108 GSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVSTQCAKTPPVAA 2287
+ T P P+ P+P TT P + T PP
Sbjct: 983 TTTTPP-----PTTTPSPPTTTPITPP----------------------TSTTTLPPTTT 1015
Query: 2288 PHRPPCTIS-PPPLSDGSPPYSASP 2359
P PP T + PPP + SPP + +P
Sbjct: 1016 PSPPPTTTTTPPPTTTPSPPTTTTP 1040
Score = 41.8 bits (96), Expect = 0.028
Identities = 52/229 (22%), Positives = 68/229 (28%), Gaps = 10/229 (4%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHP---- 178
TT PP P P + T P PS + TT P P P S++TT P
Sbjct: 789 TTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSP---PISTTTTPPPTTTP 845
Query: 179 -----TPMARSTLAMXXXXXXXXXXXXXXXXMALTHP-TSPAGIATACRLKLPLKKNTAK 340
TP +T +T P T PA T P T
Sbjct: 846 SPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTT 905
Query: 341 SA*PWMPSNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKS 520
+ P + S P T P + P P P +
Sbjct: 906 TTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPT 965
Query: 521 LTKAT*SVVPNQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTPHSP 697
+T T + TP+ P T P TP+P P +TP +P
Sbjct: 966 ITTTT-------------------PPPTTTPSPPTTTTTTPPPTTTPSP--PTTTPITP 1003
Score = 41.4 bits (95), Expect = 0.037
Identities = 89/400 (22%), Positives = 119/400 (29%), Gaps = 4/400 (1%)
Frame = +2
Query: 1169 PACISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCA 1348
P PT +TP + S PP+ I P + T PP + PP+ ++ P
Sbjct: 855 PTTTPSPPTTTTTTPPPTTTPS-PPMTTPITPPASTTTLPPTTTPSPPTTTT--TTPPPT 911
Query: 1349 QPPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHAAPH 1528
PS P+ T PSP + P T T P P
Sbjct: 912 TTPSPPTTTPITPPTSTTTLPPTTT------PSPPPTTTTTPPP---TTTPSPPTTTTP- 961
Query: 1529 *CAKLPTASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASL 1708
PT + + TP + P T SP + T P S T + S
Sbjct: 962 ---SPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSP 1018
Query: 1709 NPLTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNP 1888
P T+T+ PT P + P
Sbjct: 1019 PPTTTTTPPPTTTPSPPTTTTPS---------------------------PPITTTTTPP 1051
Query: 1889 RTSSRHWAPTSCVCGLP-PPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPP 2065
T++ P+S + P PPTT PSP TP
Sbjct: 1052 PTTT----PSSPITTTPSPPTTTMTTPSPTTTPSSPITTTT----------------TPS 1091
Query: 2066 YTSCP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPK 2245
T+ P SP + T P + PS P T +TTLP P
Sbjct: 1092 STTTP----SP-PPTTMTTPSPTTTPSPPTTTMTTLP---------------------PT 1125
Query: 2246 IVSTQCAKTPPVAAPHRPPCTISPP---PLSDGSPPYSASPLTN 2368
S+ TP P +I+PP P S +P PL N
Sbjct: 1126 TTSSPLTTTP-------LPPSITPPTFSPFSTTTPTTPCVPLCN 1162
Score = 41.0 bits (94), Expect = 0.049
Identities = 62/299 (20%), Positives = 84/299 (27%), Gaps = 13/299 (4%)
Frame = +2
Query: 1907 WAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTSC--- 2077
W C+ PPTT T P P +PP T+
Sbjct: 765 WPMDKCITTPSPPTT-TPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTP 823
Query: 2078 -P*AT*SPWIAGSFTAPLNS--NRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKI 2248
P T SP I+ + T P + + P+ P+P TT P I
Sbjct: 824 LPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI 883
Query: 2249 VSTQCAKT-PPVAAPHRP-PCTISPPPLSDGSPPYSASPLTNXXXXXXXXXXXXXXXXXX 2422
T PP P P T +PPP + SPP +
Sbjct: 884 TPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT 943
Query: 2423 XXXXXXXXXXXXXXXXXXXXXXXCVTTSPKYWNPCAPTALLAPH*KQKSXXXXXXXXXXA 2602
TT P P PT +
Sbjct: 944 TTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI-- 1001
Query: 2603 GNHSPKNSASSLLVEMSPLPRPT-----PMASLSAPNQPPKPNVPAAGITVPT*ALTQPI 2767
+P S ++L +P P PT P + +P P+ P T P T
Sbjct: 1002 ---TPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSS 1058
Query: 2768 PNSADAASPTLT 2803
P + + PT T
Sbjct: 1059 PITTTPSPPTTT 1070
Score = 35.6 bits (80), Expect = 2.1
Identities = 36/175 (20%), Positives = 50/175 (28%), Gaps = 3/175 (1%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMA 190
TT PP P P + T P PS T + +P S T TP
Sbjct: 969 TTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 1028
Query: 191 RSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATA---CRLKLPLKKNTAKSA*PWMP 361
+T + T P+SP + + P T S P
Sbjct: 1029 TTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSS--PITT 1086
Query: 362 SNSAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKSLTKAT 535
+ + + P T T P + P+ PLP S+T T
Sbjct: 1087 TTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPT 1144
Score = 34.0 bits (76), Expect = 6.3
Identities = 50/229 (21%), Positives = 69/229 (29%), Gaps = 11/229 (4%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTT---STHNCAPMPKAAPCSSSTTAHP- 178
TT PP P P + T P PS T ST P +P ++TT P
Sbjct: 890 TTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP 949
Query: 179 ----TPMARSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATACRLKLPLKKNTAKSA 346
+P +T + T T P + P+ T+ +
Sbjct: 950 TTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1009
Query: 347 *PWMPSNSAKNAVNTLPNRXXXXXXXXXXXXX---XXXGTPPTKPLISALKPMKYAPLPK 517
P + S T P TPP P + P+ P P
Sbjct: 1010 LPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP--PTTTPSSPITTTPSPP 1067
Query: 518 SLTKAT*SVVPNQCIGALIVAQHWLKQRSNTPTKPLQWWTLPILPWTPAPWQPYSTPHSP 697
+ T T S + TP+ P+ T P TP+P T SP
Sbjct: 1068 TTTMTTPSP-------------------TTTPSSPITTTTTPSSTTTPSPPPTTMTTPSP 1108
>gi|6093225|emb|CAB59177.1| (AL122037) hypothetical protein [Homo
sapiens]
Length = 316
Score = 41.8 bits (96), Expect = 0.028
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Frame = +1
Query: 2008 RIRNTARFLL---GNLHGFDPTLHLVPLSDMIALDRWIVHRAFELQQTIKAAYTRYDFAE 2178
+I N RF+L G P L P S M D WI+ R Q + + + +
Sbjct: 1 KIWNALRFILNALGEKFVPQPAEELSPSSPM---DAWILSRLALAAQECERGFLTRELSL 57
Query: 2179 IVQTILNFCSVDLGSLYLDVTKDRLYTMREDAPGRRSAQTAMYHLTAAFVRWIAPILSFT 2358
+ + +F +L +YL+ K L+ +P ++ +R +AP++ F
Sbjct: 58 VTHALHHFWLHNLCDVYLEAVKPVLW----HSPRPLGPPQVLFSCADLGLRLLAPLMPFL 113
Query: 2359 ADELWSYLP 2385
A+ELW LP
Sbjct: 114 AEELWQRLP 122
>gi|451544 (U04267) proline-rich cell wall protein [Gossypium
barbadense]
Length = 214
Score = 40.6 bits (93), Expect = 0.064
Identities = 43/162 (26%), Positives = 55/162 (33%)
Frame = +2
Query: 1880 SNPRTSSRHWAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALT 2059
SNP TS+ AP + PPPTT P+P T
Sbjct: 27 SNPPTSTP--APPTPPASTPPPTTQAP-PTP--------------------------TAT 57
Query: 2060 PPYTSCP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXX 2239
PP S P T SP + P+++ PS PP P T P S
Sbjct: 58 PPPVSTPPPTSSPPPVTASPPPVSTPPPSSPP-PATPPPASPPP---------ATPPPAS 107
Query: 2240 PKIVSTQCAKTPPVAAPHRPPCTISPPPLSDGSPPYSASPLT 2365
P + A PP P P +PPP + P ++ P T
Sbjct: 108 PPPATPPPASPPPATPPPATPPPATPPPATPPPAPLASPPAT 149
>gi|477072|pir||A48018 mucin 7 precursor, salivary - human
Length = 377
Score = 40.6 bits (93), Expect = 0.064
Identities = 47/185 (25%), Positives = 68/185 (36%), Gaps = 3/185 (1%)
Frame = +2
Query: 1190 PTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCAQPPSRPS 1369
PT +TP +S+ P TP A PP S APP + ++ P A P+ PS
Sbjct: 170 PTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA--PPTPPATTPAPPS 227
Query: 1370 HTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHAAPH*CAKLPT 1549
+ +P P T+ A P A PT
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPS-SASAPPETTAAPPT 286
Query: 1550 ASNNRASTSGTPWTKPNYSALKPINT-KKSPISLT--SGLIPASPTKQCSLSAASLNPLT 1720
S + +P P + PI T SP +L + A+PT Q + S+ T
Sbjct: 287 PSATTPAPPSSP--APQETTAAPITTPNSSPTTLAPDTSETSAAPTHQ---TTTSVTTQT 341
Query: 1721 STSKVPTN 1744
+T+K PT+
Sbjct: 342 TTTKQPTS 349
Score = 38.7 bits (88), Expect = 0.25
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +2
Query: 2120 APLNSNRP----SKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVSTQCAKTPPVAA 2287
AP+NS P + PPTP T P + + A AA
Sbjct: 155 APVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAA 214
Query: 2288 PHRPPCTISPPPLSDGSPPYSASPLT 2365
P PP T PP S P +A+P T
Sbjct: 215 PPTPPATTPAPPSSSAPPETTAAPPT 240
Score = 36.0 bits (81), Expect = 1.6
Identities = 46/160 (28%), Positives = 58/160 (35%), Gaps = 9/160 (5%)
Frame = +2
Query: 1886 PRTSSRHWAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPP 2065
P S+ AP S PP TTA P+P PP
Sbjct: 170 PTPSATTPAPPSS--SAPPETTAAP-PTPSATTQAPPSSSAPPETTAAPPTPPATTPAPP 226
Query: 2066 YTSCP*AT*S--PWIAGSFTAPLNSNRPSK----PPTP-VTTLPKSSKQYXXXXXXXXXX 2224
+S P T + P + + APL+S+ P + PPTP TTL SS
Sbjct: 227 SSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSS------------- 273
Query: 2225 XXXXXPKIVSTQCAKTPP--VAAPHRPPCTISPPPLSDGSPPYSASPLT 2365
A PP AAP P T PP S +A+P+T
Sbjct: 274 -------------ASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPIT 309
>gi|2501027|sp|P71698|SYL_MYCTU LEUCYL-TRNA SYNTHETASE (LEUCINE--TRNA
LIGASE) (LEURS) >gi|1568580|emb|CAB02520.1| (Z80775) leuS
[Mycobacterium tuberculosis]
Length = 969
Score = 40.6 bits (93), Expect = 0.064
Identities = 80/301 (26%), Positives = 139/301 (45%), Gaps = 81/301 (26%)
Frame = +1
Query: 175 PYANGQ-IHLGHAVNKILKDIIIKSKHLDGFDAPYIPGWDCHGLPIE-IAIEK-KYGKVG 345
PY +G+ +H+GH + I D+ + + G + + G+D GLP E A++ + +
Sbjct: 78 PYPSGEGLHVGHPLGYIATDVYARYFRMVGRNVLHALGFDAFGLPAEQYAVQTGTHPRTR 137
Query: 346 VTLDAVQFRQKC----------REYAAEQIQLQR-RDFKRLGIIGDW-------DAPYKT 471
+ V FR++ R ++ + R + L I W P
Sbjct: 138 TEANVVNFRRQLGRLGFGHDSRRSFSTTDVDFYRWTQWIFLQIYNAWFDTTANKARPISE 197
Query: 472 LDFRFEA-----DEIRALAK--------IVDKGHLI-RGTKPVHWCFDCGSALAEAEIE- 606
L FE+ D R AK ++D+ L+ R V+WC G+ LA E+
Sbjct: 198 LVAEFESGARCLDGGRDWAKLTAGERADVIDEYRLVYRADSLVNWCPGLGTVLANEEVTA 257
Query: 607 -------------------------YTDKTSPMVDVA-YPAL----------DPSALAAV 678
Y D+ +DV +P + A+
Sbjct: 258 DGRSDRGNFPVFRKRLRQWMMRITAYADRLLDDLDVLDWPEQVKTMQRNWIGRSTGAVAL 317
Query: 679 FNATLPPD--VQLAVPIWTTTPWTLPASLAISVGPTLDYV--LVEGPTHSGQRRWXXXXX 846
F+A D ++ + ++TT P TL + + + P D V LV +G
Sbjct: 318 FSARAASDDGFEVDIEVFTTRPDTLFGATYLVLAPEHDLVDELVAASWPAGVNPLWTYGG 377
Query: 847 XXXXXXXXRYGIAELLIHGSAKGAAMEQ---HILAHPFYP--DRTIPLLLGNHVSAEDGT 1011
Y A + + E+ + ++ P +P+ + ++V A GT
Sbjct: 378 GTPGEAIAAYRRAIAAKSDLERQESREKTGVFLGSYAINPANGEPVPIFIADYVLAGYGT 437
Query: 1012 GAVHTAPGHGQEDHQVFQQYGL 1077
GA+ PGH Q D + +GL
Sbjct: 438 GAIMAVPGHDQRDWDFARAFGL 459
Score = 34.8 bits (78), Expect = 3.7
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 85/179 (47%)
Frame = +1
Query: 1396 GQARILSMIENRPDWTISRQRTWGVPIPLFVHRHSGAPHP-RSAALMRQVADRVEQQGV- 1569
G+ARI + DW +RQR WG P P+ V+ G PH AAL ++ D + V
Sbjct: 509 GRARIEFKLR---DWLFARQRYWGEPFPI-VYDSDGRPHALDEAALPVELPDVPDYSPVL 564
Query: 1570 -----------------DIWYSLDQTELLGTEADQYEKITDILDVWFDS----------- 1665
W +D LG Y + T+++ W S
Sbjct: 565 FDPDDADSEPSPPLAKATEWVHVDLD--LGDGLKPYSRDTNVMPQWAGSSWYELRYTDPH 622
Query: 1666 ------GITHEAVLL-----ERGLPKP--ADLYLEGADQ--------------------- 1743
+EA + E G P DLY+ GA+
Sbjct: 623 NSERFCAKENEAYWMGPRPAEHGPDDPGGVDLYVGGAEHAVLHLLYSRFWHKVLYDLGHV 682
Query: 1744 ----------HRGWFQSSLLTGVAMDNAAPYKQCLTHG-----------FTVDQHGRKMS 1860
++G+ Q+ T A + P +Q + G V Q K+
Sbjct: 683 SSREPYRRLVNQGYIQAYAYTD-ARGSYVPAEQVIERGDRFVYPGPDGEVEVFQEFGKIG 741
Query: 1861 KSLGNGIEPQDIIKTLGADILRLW 1932
KSL N + P +I GAD LR++
Sbjct: 742 KSLKNSVSPDEICDAYGADTLRVY 765
>gi|100753|pir||S13383 hydroxyproline-rich glycoprotein - sorghum
>gi|228939|prf||1814452D Hyp-rich glycoprotein [Sorghum
bicolor]
Length = 283
Score = 38.3 bits (87), Expect = 0.32
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +2
Query: 14 TKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTP 184
TKPP P P P +P V PS + T+ P P A +ST HP P
Sbjct: 177 TKPPTHTPSPKPPTSKPTPPVYTPSPKPPKPSPPTYTPTPKPPATKPPTSTPTHPKP 233
>gi|119713|sp|P24152|EXTN_SORBI EXTENSIN PRECURSOR (PROLINE-RICH
GLYCOPROTEIN) >gi|21627|emb|CAA39485| (X56010)
hydroxyproline-rich glycoprotein [Sorghum bicolor]
Length = 283
Score = 38.3 bits (87), Expect = 0.32
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +2
Query: 14 TKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTP 184
TKPP P P P +P V PS + T+ P P A +ST HP P
Sbjct: 177 TKPPTHTPSPKPPTSKPTPPVYTPSPKPPKPSPPTYTPTPKPPATKPPTSTPTHPKP 233
>gi|1085433|pir||S55316 mucin (clone PGM-2B) - pig >gi|915207 (U10281)
gastric mucin [Sus scrofa]
Length = 317
Score = 37.9 bits (86), Expect = 0.42
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 9/201 (4%)
Frame = +2
Query: 1139 QPHHSVN*HWPACISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSG 1318
QP S + + IS +P+ S P S S T A + +P S +PP S
Sbjct: 115 QPSSSSSPPISSTISVQPSSSSSAPTTSATSVQSSSSGSAPTTSATSVQPSSSSSPPIS- 173
Query: 1319 SSLWNKRPCAQPPSRPSHTXXXXXXXXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVT 1498
S + +P + S P+ + S +AP S + +
Sbjct: 174 -STISVQPSSSS-SAPTTSATSVQSSSSSSAPTTSATSVQPSSSGSAPTTSATSVQSSSS 231
Query: 1499 AEHPIHAAPH*CAKLPTASNNRASTSGTPWTKPNYS---------ALKPINTKKSPISLT 1651
+ PI + + T+S++ + T+ T +P+ S +++P ++ PIS T
Sbjct: 232 SSPPISST----ISVQTSSSSSSPTTSTTSVQPSSSGSAPTTSATSVQPSSSSSPPISST 287
Query: 1652 SGLIPASPTKQCSLSAASLNPLTSTSKVPT 1741
+ P+S + + SA S+ +S+S PT
Sbjct: 288 ISVQPSSSSSAPTTSATSVQS-SSSSSAPT 316
Score = 37.5 bits (85), Expect = 0.55
Identities = 52/246 (21%), Positives = 89/246 (36%), Gaps = 2/246 (0%)
Frame = +2
Query: 1220 SVASSLPPLKCIIATPIAGATKPPLSFAPPPSGSSLWNKRPCAQPPSRPSH--TXXXXXX 1393
SV + PP T GAT S P S S+ QP S S T
Sbjct: 45 SVRVTSPP-----ETSSHGATSSTTSVQPSSSSSAPTTSATSVQPSSSGSAPTTSATSVQ 99
Query: 1394 XXXXXXXXXXXXXXXGPSPDNAPGASRFPCLYTVTAEHPIHAAPH*CAKLPTASNNRAST 1573
PS ++P P T++ + ++ A +A++ ++S+
Sbjct: 100 SSSSGSAPTTSATSVQPSSSSSP-----PISSTISVQPSSSSS----APTTSATSVQSSS 150
Query: 1574 SGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASLNPLTSTSKVPTNXXX 1753
SG+ T + ++++P ++ PIS T + P+S + + SA S+ +S+S T+
Sbjct: 151 SGSAPTT-SATSVQPSSSSSPPISSTISVQPSSSSSAPTTSATSVQSSSSSSAPTTSATS 209
Query: 1754 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRTSSRHWAPTSCVCG 1933
+ + S+P TS+ P+S G
Sbjct: 210 VQPSSSGSAPTTSATSVQSSSSSSPPISSTISVQTS---SSSSSPTTSTTSVQPSS--SG 264
Query: 1934 LPPPTTAT 1957
P T+AT
Sbjct: 265 SAPTTSAT 272
>gi|2160156 (AC000132) Strong similarity to S. pombe leucyl-tRNA
synthetase (gb|Z73100). [Arabidopsis thaliana]
Length = 1084
Score = 37.1 bits (84), Expect = 0.72
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 46 FPMRGDLPKREPAILERWERDDFYAQLRAHAKGRP--LFLLHDGPPYANGQIHLGHAVNK 219
+ R L + E + + WE +D + +P F PY NG +H+GHA +
Sbjct: 8 YARRDRLLEIEATVRKWWEDEDVFRAESCENLPKPGEKFFSTFPFPYMNGYLHIGHAFSL 67
Query: 220 ILKDIIIKSKHLDGFDAPYIPGWDCHGLPIEIAIEK 327
D L G + G+ C G+PI+ + +K
Sbjct: 68 SKVDFASAYHRLRGANVLLPFGFHCTGMPIKASADK 103
>gi|551946 (M35367) transfer RNA-Ile synthetase [Pseudomonas
fluorescens]
Length = 29
Score = 36.7 bits (83), Expect = 0.95
Identities = 15/24 (62%), Positives = 18/24 (74%)
Frame = +1
Query: 10 DYKTTLHLPATDFPMRGDLPKREP 81
DYK T +LP T FPM+ LP+REP
Sbjct: 3 DYKATXNLPDTAFPMKAGLPQREP 26
>gi|3874800|emb|CAB03944.1| (Z81479) similar to Kunitz/Bovine
pancreatic trypsin inhibitor domain (8 domains); cDNA
EST EMBL:D34450 comes from this gene; cDNA EST
EMBL:D37354 comes from this gene; cDNA EST EMBL:D37516
comes from this gene [Caenorhabditi...
Length = 1043
Score = 36.4 bits (82), Expect = 1.2
Identities = 20/65 (30%), Positives = 31/65 (46%)
Frame = +2
Query: 11 TTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMA 190
+T PP PRPT T+ V ++ TT+T P P++ P + + PTP
Sbjct: 100 STLPPITYPRPTVGAPITTQQVLITETTTQPPTTTTTLETPAPESTPSMAPSHTDPTPAP 159
Query: 191 RSTLA 205
+T+A
Sbjct: 160 ETTVA 164
>gi|3914099|sp|Q05544|N551_SOYBN EARLY NODULIN 55-1 PRECURSOR (N-55-1)
>gi|487040|pir||S37353 nodulin (clone GmENOD55-1) -
soybean (fragment) >gi|18585|emb|CAA48908| (X69156)
nodulin [Glycine max]
Length = 137
Score = 36.0 bits (81), Expect = 1.6
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +2
Query: 2609 HSPKNSASSLLVEMSPLPRPTPMASLSAPNQPPKPN 2716
HSP S+ S SP P P+P SLS+P+ P PN
Sbjct: 76 HSPSPSSPSPSPSPSPSPSPSPSPSLSSPSPSPLPN 111
>gi|134466|sp|P13730|SGS3_DROER SALIVARY GLUE PROTEIN SGS-3
PRECURSOR >gi|84867|pir||S01359 salivary glue protein
sgs-3 precursor - fruit fly (Drosophila erecta)
Length = 328
Score = 36.0 bits (81), Expect = 1.6
Identities = 30/113 (26%), Positives = 42/113 (36%), Gaps = 5/113 (4%)
Frame = +2
Query: 8 KTTKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPT-- 181
+TT PC RPT C + RP ++ +T C P + A C ++TT PT
Sbjct: 31 RTTPKPCTTARPT--CAPVTTTTCRPPTTTRCPPPTTTRCPPPTRPAEC-TATTKRPTAR 87
Query: 182 PMARSTLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATACRL---KLPLKKNTAKSA 346
P R T T + AT R + P ++ T K A
Sbjct: 88 PTTRRTTVRATTKRATTRRTTKRATTRRTTVRATTKRATTRRTTTKRAPTRRTTTKRA 145
>gi|123406|sp|P22810|HMOC_DROME HOMEOTIC PROTEIN ORTHODENTICLE
(OCELLILESS PROTEIN) >gi|103286|pir||A35912 homeotic
protein orthodenticle - fruit fly (Drosophila
melanogaster) >gi|8312|emb|CAA41732| (X58983)
orthodenticle [Drosophila melanogaster]
Length = 671
Score = 36.0 bits (81), Expect = 1.6
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 2603 GNHSPKNSASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPAAGITVP 2743
GN +P +S+SS+ +P P TPM+ SAP +P PN P+ +P
Sbjct: 428 GNITPMDSSSSIT---TPSPPITPMSPQSAPQRPMPPNRPSPPTILP 471
>gi|1942972|pdb|1KXF| Sindbis Virus Capsid, (Wild-Type) Residues
1-264, Tetragonal Crystal Form (Form Ii)
Length = 264
Score = 36.0 bits (81), Expect = 1.6
Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 2528 APTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLV-----EMSPLPRPTPMASLSA 2692
APTA+ P ++++ + + S+L++ +P PRP P A
Sbjct: 16 APTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQNPRPRPPPRQKKQA 75
Query: 2693 PNQPPKPNVP 2722
P QPPKP P
Sbjct: 76 PKQPPKPKKP 85
>gi|2088658|gb|AAB95292.1| (AF002109) En/Spm-like transposon protein
[Arabidopsis thaliana]
Length = 510
Score = 36.0 bits (81), Expect = 1.6
Identities = 37/158 (23%), Positives = 59/158 (36%), Gaps = 9/158 (5%)
Frame = +2
Query: 35 PRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMARSTLAMX- 211
P S + + +RPS+ T S+ + + S+TT PTPM+RST
Sbjct: 162 PTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTK-PTPMSRSTSLSSS 220
Query: 212 ----XXXXXXXXXXXXXXXMALTHPTSPAGIATACRLKLPLKKNTAKS----A*PWMPSN 367
+ + P++ A R PL ++TA+S + P +P +
Sbjct: 221 RLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPS 280
Query: 368 SAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAP 508
+ +T R T P IS +KP AP
Sbjct: 281 KTISRSSTPTRR---------PIASASAATTTANPTISQIKPSSPAP 318
>gi|3858883 (U67056) myosin I heavy chain kinase [Acanthamoeba
castellanii] >gi|4206769 (AF104910) myosin I heavy chain
kinase [Acanthamoeba castellanii]
Length = 753
Score = 36.0 bits (81), Expect = 1.6
Identities = 24/56 (42%), Positives = 30/56 (52%), Gaps = 7/56 (12%)
Frame = +2
Query: 2654 PLPRP------TPMASLSAPNQPPKPNVPAAGITVPT*ALT-QPIPNSADAASPTLTDQE 2812
P PRP P S P PP+P +PA T PT A+T P+P A A +P D
Sbjct: 350 PPPRPGQPAPGRPTMRPSQPGGPPRPPMPAPVPTTPTAAVTPAPVPVPAPAPAPAPADTT 409
Query: 2813 NSA 2821
+A
Sbjct: 410 PAA 412
>gi|3132538|gb|AAC16287.1| (AF061207) polyprotein [Sindbis virus]
Length = 143
Score = 36.0 bits (81), Expect = 1.6
Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 2528 APTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLV-----EMSPLPRPTPMASLSA 2692
APTA+ P ++++ + + S+L++ +P PRP P A
Sbjct: 16 APTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQTPRPRPPPRQKKQA 75
Query: 2693 PNQPPKPNVP 2722
P QPPKP P
Sbjct: 76 PKQPPKPKKP 85
>gi|130578|sp|P27285|POLS_SINDO STRUCTURAL POLYPROTEIN (P130)
[CONTAINS: COAT PROTEIN C ; SPIKE GLYCOPROTEINS E3, E2
AND E1; 6 KD PEPTIDE] >gi|74513|pir||VHWV82 structural
polyprotein - Ockelbo virus (strain Edsbyn 82-5)
>gi|334113 (M69205) structural polyprotein [Sindbis
virus]
Length = 1245
Score = 36.0 bits (81), Expect = 1.6
Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 2528 APTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLV-----EMSPLPRPTPMASLSA 2692
APTA+ P ++++ + + S+L++ +P PRP P A
Sbjct: 16 APTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQNPRPRPPPRQKKQA 75
Query: 2693 PNQPPKPNVP 2722
P QPPKP P
Sbjct: 76 PKQPPKPKKP 85
>gi|1125068 (U38304) structural polyprotein [Sindbis-like virus]
Length = 1245
Score = 36.0 bits (81), Expect = 1.6
Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 2528 APTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLV-----EMSPLPRPTPMASLSA 2692
APTA+ P ++++ + + S+L++ +P PRP P A
Sbjct: 16 APTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQTPRPRPPPRQKKQA 75
Query: 2693 PNQPPKPNVP 2722
P QPPKP P
Sbjct: 76 PKQPPKPKKP 85
>gi|1125071 (U38305) structural polyprotein [Sindbis-like virus]
Length = 1245
Score = 36.0 bits (81), Expect = 1.6
Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 2528 APTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLV-----EMSPLPRPTPMASLSA 2692
APTA+ P ++++ + + S+L++ +P PRP P A
Sbjct: 16 APTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQTPRPRPPPRQKKQA 75
Query: 2693 PNQPPKPNVP 2722
P QPPKP P
Sbjct: 76 PKQPPKPKKP 85
>gi|4099086 (U82999) KEXIN [Pneumocystis carinii]
Length = 671
Score = 35.6 bits (80), Expect = 2.1
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 17 KPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMARS 196
+P I PRPT P + P + +S+ + TTST+ +P P ++ SS T T S
Sbjct: 502 EPEQIPPRPTPPRPTSEPQPEQKPTSIASSTTSTNLISPAPTSS--SSKTEISTTQKVSS 559
Query: 197 T 199
T
Sbjct: 560 T 560
>gi|223384|prf||0801290B protein,core [Sindbis virus]
>gi|223671|prf||0907187A protein,core [Sindbis virus]
Length = 264
Score = 35.6 bits (80), Expect = 2.1
Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 2528 APTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLVEMS-----PLPRPTPMASLSA 2692
APTA+ P ++++ + + S+L++ + P PRP P A
Sbjct: 16 APTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQPPRPRPPPRQKKQA 75
Query: 2693 PNQPPKPNVP 2722
P QPPKP P
Sbjct: 76 PKQPPKPKKP 85
>gi|6460434|gb|AAF12144.1|AE002089_7 (AE002089) hypothetical protein
[Deinococcus radiodurans]
Length = 347
Score = 35.6 bits (80), Expect = 2.1
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 2654 PLPRPTPMASLSAPNQPPKPNVPAAGITVPT*ALTQPIPNSADA-ASPTL 2800
P P P P+A AP PP P+ PAA +P P+ S A A P L
Sbjct: 29 PGPAPAPVAPAPAPVPPPPPSAPAAAPALPVAPAPAPVAQSTCAPALPAL 78
>gi|73648|pir||EDBEIF immediate-early protein IE180 - suid
herpesvirus 1 (strain Indiana-Funkhauser)
Length = 1460
Score = 35.6 bits (80), Expect = 2.1
Identities = 36/110 (32%), Positives = 42/110 (37%), Gaps = 9/110 (8%)
Frame = +3
Query: 651 PGP---QRPGSRIQRHTPP*CTTCRPHLDHHPVDTPRLPGHLCWANPGLRPG*RTDPLRS 821
PGP R S+ QR PP RP P PR P P P P R
Sbjct: 144 PGPGRRPRQHSQRQRPGPPAAPGARP-----PPQPPRPPPPPAPPAPPAPPA----PRRP 194
Query: 822 APLAHPGGSTR------RQSTGTLRHRRTAHPWQRQRSRHGAAHLGPPVLSRSHHPPTA 980
P G TR R+ G RH+ + W ++R G PP RS P A
Sbjct: 195 RGDGPPRGGTRSVSPGRRRGLGPRRHQHSQQRWPQRRHGGGPLPQPPPPPGRSRRPAAA 253
>gi|3132534|gb|AAC16285.1| (AF061205) polyprotein [Sindbis virus]
>gi|3132536|gb|AAC16286.1| (AF061206) polyprotein
[Sindbis virus]
Length = 143
Score = 35.6 bits (80), Expect = 2.1
Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 2528 APTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLVEMS-----PLPRPTPMASLSA 2692
APTA+ P ++++ + + S+L++ + P PRP P A
Sbjct: 16 APTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQPPRPRPPPRQKKQA 75
Query: 2693 PNQPPKPNVP 2722
P QPPKP P
Sbjct: 76 PKQPPKPKKP 85
>gi|3912991|sp|O42814|AGUA_ASPTU ALPHA-GLUCURONIDASE PRECURSOR
(ALPHA-GLUCOSIDURONASE) >gi|2853055|emb|CAA75605|
(Y15405) alpha-glucuronidase [Aspergillus tubingensis]
Length = 841
Score = 35.6 bits (80), Expect = 2.1
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = -1
Query: 1962 HFVAVVGGGNPQTQDVGAQCLDDVLGFDSIAQ*FGHFAAVLVDGEAVGQALFVGCGVVHG 1783
++ + GG + T VG + + LG D Q GH ++ +DG + + F G V G
Sbjct: 754 NYYDLYGGQSKWTLSVGDKVVGQWLG-DMEHQSLGHTPSIYLDGHSATRITFHGVVVRQG 812
Query: 1782 D----AGEEGGLEPAAV 1744
D GE G+EPA V
Sbjct: 813 DQLKIVGEANGVEPAPV 829
>gi|130579|sp|P03316|POLS_SINDV STRUCTURAL POLYPROTEIN (P130)
[CONTAINS: COAT PROTEIN C ; SPIKE GLYCOPROTEINS E3, E2
AND E1; 6 KD PEPTIDE] >gi|74511|pir||VHWVB structural
polyprotein - Sindbis virus (strain HRSP) >gi|334103
(J02363) p130 structural polyprotein [Sindbis virus]
Length = 1245
Score = 35.6 bits (80), Expect = 2.1
Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 2528 APTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLVEMS-----PLPRPTPMASLSA 2692
APTA+ P ++++ + + S+L++ + P PRP P A
Sbjct: 16 APTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQPPRPRPPPRQKKQA 75
Query: 2693 PNQPPKPNVP 2722
P QPPKP P
Sbjct: 76 PKQPPKPKKP 85
>gi|74512|pir||VHWVB2 structural polyprotein - Sindbis virus (strain
HRLP) >gi|62099|emb|CAA24684| (V01403) polyprotein
[Sindbis virus]
Length = 1245
Score = 35.6 bits (80), Expect = 2.1
Identities = 20/65 (30%), Positives = 31/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 2528 APTALLAPH*KQKSXXXXXXXXXXAGNHSPKNSASSLLVEMS-----PLPRPTPMASLSA 2692
APTA+ P ++++ + + S+L++ + P PRP P A
Sbjct: 16 APTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQPPRPRPPPRQKKQA 75
Query: 2693 PNQPPKPNVP 2722
P QPPKP P
Sbjct: 76 PKQPPKPKKP 85
>gi|1916844 (U82987) Bcl-2 binding component 3 [Homo sapiens]
Length = 242
Score = 35.2 bits (79), Expect = 2.8
Identities = 33/95 (34%), Positives = 40/95 (41%), Gaps = 2/95 (2%)
Frame = +3
Query: 663 RPGSRIQRHTPP*CTTCRPHLDHHPVDTPRLPG--HLCWANPGLRPG*RTDPLRSAPLAH 836
RPG R +R P C P H P R PG L W +P +P R P RS+ LA
Sbjct: 58 RPGCRPRRPHP--AARCLPLRPHRPTRRHRRPGGFPLAWGSP--QPAPRPAPGRSSALAL 113
Query: 837 PGGSTRRQSTGTLRHRRTAHPWQRQRSRHGAAHLGPP 947
GG+ + G R QR G +H G P
Sbjct: 114 AGGA----APGVARA-------QRPGGSGGRSHPGGP 139
>gi|135574|sp|P03186|TEGU_EBV LARGE TEGUMENT PROTEIN
>gi|73929|pir||QQBE8 BPLF1 protein - human herpesvirus 4
(strain B95-8) >gi|1334853|emb|CAA24839.1| (V01555) BPLF1
reading frame, 1 NXT/S, analogous to VZV RF22 [Human
herpesvirus 4] >gi|225109|prf||1208408E gene BPLF1 [Human
herpesvirus 4]
Length = 3149
Score = 34.8 bits (78), Expect = 3.7
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Frame = +2
Query: 2651 SPLPRPTPMASLSAPNQPPKPNVPA--------AGITVPT*ALTQPIPNSADAASPTLT 2803
SP P P P++++ AP+ P P +P A + P LT P P+ AA+PT T
Sbjct: 477 SPTPHPAPVSTI-APSVTPSPRLPLQIPIPLPQAAPSNPKIPLTTPSPSPTAAAAPTTT 534
>gi|2114321|dbj|BAA20037| (D88733) membrane glycoprotein [Equine
herpesvirus 1]
Length = 866
Score = 34.8 bits (78), Expect = 3.7
Identities = 64/425 (15%), Positives = 109/425 (25%), Gaps = 5/425 (1%)
Frame = +2
Query: 1547 TASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASL----NP 1714
T+ + ++++SGT + P T SP + T P+S + Q S +AA+ +
Sbjct: 35 TSGSGQSTSSGTT-NSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPST 93
Query: 1715 LTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRT 1894
+ST+ +PT+ A + T
Sbjct: 94 ASSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATTTAVTT-------AASTAAST 146
Query: 1895 SSRHWAPTSCVCGLPPPTTATKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYTS 2074
S+ T+ P TT P T T+
Sbjct: 147 SAETTTATATATSTPTTTT------PTSTTTTTATTTVPTTASTTTDTTTAATTTAATTT 200
Query: 2075 CP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIVS 2254
T + A + TA + + T TT ++ +
Sbjct: 201 AATTTAATTTAATTTA---ATTTAATTTAATTTAATTTAATTTAATTSSATTAATTTAAT 257
Query: 2255 TQCAKTPPVAAPHRPPCTISPPPLSDGSPPYSASPLTNXXXXXXXXXXXXXXXXXXXXXX 2434
T A T + + + +A+ T
Sbjct: 258 TTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAAT 317
Query: 2435 XXXXXXXXXXXXXXXXXXXCVTTSPKYWNPCAPTALLA-PH*KQKSXXXXXXXXXXAGNH 2611
TT P A TA A P S
Sbjct: 318 TTAATTTAATTTGSPTSGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAA 377
Query: 2612 SPKNSASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPAAGITVPT*ALTQPIPNSADAAS 2791
+ S + TP + +A P V A+ + T A T S D+++
Sbjct: 378 TSAESTTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTTSATTTAFTTESHTSPDSST 437
Query: 2792 PTLTDQENSA 2821
+ + E S+
Sbjct: 438 GSTSTAEPSS 447
>gi|6650709|gb|AAF21979.1|AF115363_1 (AF115363) no optic lobe
protein [Drosophila melanogaster]
Length = 130
Score = 34.8 bits (78), Expect = 3.7
Identities = 20/56 (35%), Positives = 26/56 (45%)
Frame = +2
Query: 14 TKPPCICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPT 181
T PP P TSP +TSP + S+ G+ TT AP ++ TT PT
Sbjct: 41 TTPPATDPATTSPTTSTSPTTSTSPSATGSSTT-----------APTTAPTTVAPT 85
>gi|6322611|ref|NP_012685.1|YJR151C| Yjr151cp
>gi|1352944|sp|P47179|YJ9P_YEAST HYPOTHETICAL 118.4 KD
PROTEIN IN BAT2-DAL5 INTERGENIC REGION PRECURSOR
>gi|1078284|pir||S57180 probable membrane protein
YJR151c - yeast (Saccharomyces cerevisiae)
>gi|1015903|emb|CAA89684| (Z49651) ORF YJR151c
[Saccharomyces cerevisiae]
Length = 1161
Score = 34.4 bits (77), Expect = 4.8
Identities = 29/165 (17%), Positives = 49/165 (29%), Gaps = 2/165 (1%)
Frame = +2
Query: 41 PTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMARSTLAMXXXX 220
PT+ +T+P + S++ TTST P +S+T+ PT ST
Sbjct: 153 PTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTT 212
Query: 221 XX--XXXXXXXXXXMALTHPTSPAGIATACRLKLPLKKNTAKSA*PWMPSNSAKNAVNTL 394
+ T TS + K ++ S P + + +T
Sbjct: 213 STTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTA 272
Query: 395 PNRXXXXXXXXXXXXXXXXGTPPTKPLISALKPMKYAPLPKSLTKAT 535
P T T S + + + T +T
Sbjct: 273 PTTSTTSTTSTTSTISTAPTTSTTSSTFSTSSASASSVISTTATTST 319
>gi|6093725|sp|Q11053|PKNH_MYCTU PROBABLE SERINE/THREONINE-PROTEIN
KINASE PKNH >gi|3261596|emb|CAB00914| (Z77137) pknH
[Mycobacterium tuberculosis]
Length = 626
Score = 34.4 bits (77), Expect = 4.8
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 2618 KNSASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPAAGI-TVPT*ALTQPIPNSADAASP 2794
++ S+L P+P PT A+ AP QPP P V G+ P + T P P
Sbjct: 290 RSQESTLPAPPKPVPPPTMPATAMAPRQPPAPPVTPPGVQPAPKPSYTPPAQPGPAGQRP 349
Query: 2795 TLTDQENSAIGS 2830
T Q + A S
Sbjct: 350 GPTGQPSWAPNS 361
>gi|2114323|dbj|BAA20038| (D88734) membrane glycoprotein [Equine
herpesvirus 1]
Length = 867
Score = 34.4 bits (77), Expect = 4.8
Identities = 68/425 (16%), Positives = 114/425 (26%), Gaps = 6/425 (1%)
Frame = +2
Query: 1547 TASNNRASTSGTPWTKPNYSALKPINTKKSPISLTSGLIPASPTKQCSLSAASL----NP 1714
T+ + ++++SGT + P T SP + T P+S + Q S +AA+ +
Sbjct: 35 TSGSGQSTSSGTT-NSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPST 93
Query: 1715 LTSTSKVPTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPNHWAMESNPRT 1894
+ST+ +PT+ + E+ T
Sbjct: 94 ASSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATTTAVTTAAST---SAETTTAT 150
Query: 1895 SSRHWAPTSCVCGLPPPTTA-TKCPSPKRXXXXXXXXXXXXXXXXXXXXXXCMALTPPYT 2071
++ PT+ TTA T P+ T T
Sbjct: 151 ATATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTAATTTAATTTAATT 210
Query: 2072 SCP*AT*SPWIAGSFTAPLNSNRPSKPPTPVTTLPKSSKQYXXXXXXXXXXXXXXXPKIV 2251
+ T + A + TA + + T TT ++
Sbjct: 211 TAATTTAATTTAATTTA---ATTTAATTTAATTTAATTTAATTTAATTSSATTAATTTAA 267
Query: 2252 STQCAKTPPVAAPHRPPCTISPPPLSDGSPPYSASPLTNXXXXXXXXXXXXXXXXXXXXX 2431
+T A T AA T + +A+ T
Sbjct: 268 TTTAATT--TAATTTAATTTAATT--------TAATTTAATTTAATTTAATTTAATTTAA 317
Query: 2432 XXXXXXXXXXXXXXXXXXXXCVTTSPKYWNPCAPTALLA-PH*KQKSXXXXXXXXXXAGN 2608
TT P A TA A P S
Sbjct: 318 TTTAATTTAATTTGSPTSGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSA 377
Query: 2609 HSPKNSASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPAAGITVPT*ALTQPIPNSADAA 2788
+ S + TP + +A P V A+ + T A T S D++
Sbjct: 378 ATSAESTTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTTSATTTAFTTESHTSPDSS 437
Query: 2789 SPTLTDQENSA 2821
+ + + E S+
Sbjct: 438 TGSTSTAEPSS 448
>gi|172526 (M16165) S1 protein [Saccharomyces cerevisiae]
Length = 570
Score = 34.4 bits (77), Expect = 4.8
Identities = 23/71 (32%), Positives = 40/71 (55%), Gaps = 6/71 (8%)
Frame = +2
Query: 2612 SPKNSASSLLVEMSPLPRPTPMASLSAPNQPPKPNVPAAGIT------VPT*ALTQPIPN 2773
+P + SS E S P PTP +S + + P P P++ T VPT + + I +
Sbjct: 1 APVPTPSSSTTESSSAPVPTPSSSTTESSSAPVP-TPSSSTTESSVAPVPTPSSSSNITS 59
Query: 2774 SADAASPTLTDQENSAI 2824
SA +++P + E+S++
Sbjct: 60 SAPSSTPFSSSTESSSV 76
>gi|1492039 (U60315) MC096L [Molluscum contagiosum virus subtype 1]
Length = 209
Score = 34.4 bits (77), Expect = 4.8
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +2
Query: 1142 PHHSVN*HWPACISGKPTH*LSTPCASVASSLPPLKCIIATPIAGATKPPLSFAPPPSGS 1321
PHH+ P SG+P P SL P C+ TP AGA P APP +
Sbjct: 70 PHHN----HPHAGSGEPARRQGQP------SLVPASCLARTPSAGAEVPCARQAPPARAT 119
Query: 1322 SLWNKR----PCAQPPSRPS 1369
R PC RPS
Sbjct: 120 EPGRPRQSVAPCLHEIPRPS 139
>gi|5305335|gb|AAD41594.1|AF071081_1 (AF071081) proline-rich mucin
homolog [Mycobacterium tuberculosis]
Length = 763
Score = 34.4 bits (77), Expect = 4.8
Identities = 18/51 (35%), Positives = 23/51 (44%), Gaps = 1/51 (1%)
Frame = +2
Query: 2642 VEMSPLPR-PTPMASLSAPNQPPKPNVPAAGITVPT*ALTQPIPNSADAASP 2794
+E PLP P S P PP P +P A + +P P+PN A P
Sbjct: 216 MEFPPLPPVPPDPISKETPPAPPAPPIPPAPVPIPPVPPLPPVPNKIPPAPP 267
>gi|3093388|emb|CAA06670.1| (AJ005685) thr4 [Tenebrio molitor]
Length = 810
Score = 34.0 bits (76), Expect = 6.3
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 14/65 (21%)
Frame = +2
Query: 14 TKPPCICPRP---------TSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSST 166
T PC PRP TSP + +P + +P+SS ++T C ++P + S
Sbjct: 119 TSSPCQPPRPHSSPGRPANTSPVIIHNPTIAQPTSSRAKLSTMV-TCQEPTSSSPSAVSK 177
Query: 167 T-----AHPTPMARSTLAM 208
+ +HPT + +S L M
Sbjct: 178 SRGVIISHPTSLTQSQLWM 196
>gi|1507721 (L81125) monooxygenase subunit [Pseudomonas sp.]
Length = 504
Score = 34.0 bits (76), Expect = 6.3
Identities = 25/57 (43%), Positives = 31/57 (53%), Gaps = 16/57 (28%)
Frame = +2
Query: 35 PRPTSPCVATSPNVNR---------PSSSVGNVTTSTHNCAPMPKAAPCSSSTT------ 169
P SPCV PN R P+ S+G T+ H CAP P A P S++
Sbjct: 366 PSGGSPCVTVPPNRARSFRLLSSCRPTCSIGWPATAMHGCAPWP-ATPWRSTSICGACAP 424
Query: 170 -AHPTPMARSTLA 205
H +P R LA
Sbjct: 425 GCHGSPAFRHRLA 437
>gi|3327152|dbj|BAA31644| (AB014569) KIAA0669 protein [Homo sapiens]
Length = 780
Score = 34.0 bits (76), Expect = 6.3
Identities = 23/72 (31%), Positives = 32/72 (43%), Gaps = 7/72 (9%)
Frame = +2
Query: 2603 GNHSPKNSASSLLVEMSPLP------RPTPMASLS-APNQPPKPNVPAAGITVPT*ALTQ 2761
G H P++ S L +S LP +PTP S + QP P P G + A
Sbjct: 234 GAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLP 293
Query: 2762 PIPNSADAASPTLTDQENS 2818
P P +A P + + S
Sbjct: 294 PFPGAATGPQPMMAAAQPS 312
>gi|3834293 (U80846) No definition line found [Caenorhabditis
elegans]
Length = 1032
Score = 34.0 bits (76), Expect = 6.3
Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 7/146 (4%)
Frame = +2
Query: 29 ICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMARS---- 196
I P P S S + SSS G ++T + + P SSST A TP+A S
Sbjct: 323 ITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVPGSSSTFASSTPIASSSSPG 382
Query: 197 ---TLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATACRLKLPLKKNTAKSA*PWMPSN 367
T+A + T T+ + + P+ +T S+ P S+
Sbjct: 383 STVTVAPGSSSTYGSSTPSASSSSSGTMSTNSGSTGSTVTV-APVSSSTFGSSTPIASSS 441
Query: 368 SAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPT 466
S+ + V + GT T
Sbjct: 442 SSGSTVTVVSGSSSTYGSSTPSASSSSAGTAST 474
>gi|81240|pir||JQ0964 hydroxyproline-rich glycoprotein precursor -
Chlamydomonas reinhardtii
Length = 202
Score = 34.0 bits (76), Expect = 6.3
Identities = 20/59 (33%), Positives = 32/59 (53%), Gaps = 4/59 (6%)
Frame = +2
Query: 14 TKPPCICPRPTSPCVATSPNVNR---PSSSVGNVTTSTHNCAPMPKAAPC-SSSTTAHPT 181
T PP R SP + SP+ + P +VGN + + +P P +P S + T+ P+
Sbjct: 89 TSPPPSASRSPSPSSSASPSPSPALVPIPNVGNTASPNPSSSPSPSPSPSPSPAATSSPS 148
Query: 182 PMA 190
P+A
Sbjct: 149 PIA 151
>gi|255402|bbs|113222 (S44199) class IV zygote specific cell wall
hydroxyproline-rich glycoprotein [Chlamydomonas
reinhardtii, Peptide, 202 aa] [Chlamydomonas
reinhardtii]
Length = 202
Score = 34.0 bits (76), Expect = 6.3
Identities = 20/59 (33%), Positives = 32/59 (53%), Gaps = 4/59 (6%)
Frame = +2
Query: 14 TKPPCICPRPTSPCVATSPNVNR---PSSSVGNVTTSTHNCAPMPKAAPC-SSSTTAHPT 181
T PP R SP + SP+ + P +VGN + + +P P +P S + T+ P+
Sbjct: 89 TSPPPSASRSPSPSSSASPSPSPALVPIPNVGNTASPNPSSSPSPSPSPSPSPAATSSPS 148
Query: 182 PMA 190
P+A
Sbjct: 149 PIA 151
>gi|5032119|ref|NP_005830.1|| Ser/Arg-related nuclear matrix protein
(plenty of prolines 101-like) >gi|3005587 (AF048977)
Ser/Arg-related nuclear matrix protein [Homo sapiens]
Length = 820
Score = 34.0 bits (76), Expect = 6.3
Identities = 44/159 (27%), Positives = 60/159 (37%), Gaps = 7/159 (4%)
Frame = +3
Query: 1167 GRPAYLESQPTDCRRLAPPWRPPCRR*NASXXXXXXXXQNPHCLSRHP-------PVVHL 1325
GR S P RR +P PP RR +P R P P+
Sbjct: 542 GRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRR 601
Query: 1326 YGTSGPALSRPQGHHTRHLVSPVGPSPHPQHDRKPPRLDHLQTTHLGRPDSPVCTPSQRS 1505
Y S P R P P P+ P + +H SP P QRS
Sbjct: 602 YSPSPPPKRRT-----------ASPPPPPKRRASPSPPPKRRVSH-----SP--PPKQRS 643
Query: 1506 TPSTQRRIDAPSCRPRRTTGRRHLVLPGPNRITRH*SRSIRKNHRY 1643
+P T+RR + S + R+ + P+R TR +RS + N R+
Sbjct: 644 SPVTKRRSPSLSSKHRKGS--------SPSRSTRE-ARSPQPNKRH 680
>gi|3834294 (U80846) No definition line found [Caenorhabditis
elegans]
Length = 2232
Score = 34.0 bits (76), Expect = 6.3
Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 7/146 (4%)
Frame = +2
Query: 29 ICPRPTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTPMARS---- 196
I P P S S + SSS G ++T + + P SSST A TP+A S
Sbjct: 323 ITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVPGSSSTFASSTPIASSSSPG 382
Query: 197 ---TLAMXXXXXXXXXXXXXXXXMALTHPTSPAGIATACRLKLPLKKNTAKSA*PWMPSN 367
T+A + T T+ + + P+ +T S+ P S+
Sbjct: 383 STVTVAPGSSSTYGSSTPSASSSSSGTMSTNSGSTGSTVTV-APVSSSTFGSSTPIASSS 441
Query: 368 SAKNAVNTLPNRXXXXXXXXXXXXXXXXGTPPT 466
S+ + V + GT T
Sbjct: 442 SSGSTVTVVSGSSSTYGSSTPSASSSSAGTAST 474
>gi|3041723|sp|P39770|SALM_DROME HOMEOTIC PROTEIN SPALT-MAJOR
>gi|2133723|pir||S40022 spalt protein - fruit fly
(Drosophila melanogaster) >gi|2598394|emb|CAA53229|
(X75541) spalt protein [Drosophila melanogaster]
Length = 1355
Score = 33.6 bits (75), Expect = 8.2
Identities = 20/48 (41%), Positives = 24/48 (49%)
Frame = +2
Query: 41 PTSPCVATSPNVNRPSSSVGNVTTSTHNCAPMPKAAPCSSSTTAHPTP 184
PTSP V S V + SSS S P+AAP SSS++ P P
Sbjct: 1055 PTSPSVHASSQVIKRSSSPARSEASQGALDLTPRAAPTSSSSSRSPLP 1102
>gi|3044086 (AF055904) unknown [Myxococcus xanthus]
Length = 542
Score = 33.6 bits (75), Expect = 8.2
Identities = 35/112 (31%), Positives = 41/112 (36%), Gaps = 11/112 (9%)
Frame = +3
Query: 639 CLSCPGPQRPGSRIQRHTPP*CTTCRPHLDHHPVDTPRLPGHLCWANPGLRP-G*RTDPL 815
C CP P R +R P TC P + P C + PG P G P
Sbjct: 119 CTPCPAPPRCRARPSAPAPSAGRTC-PTAGPSSCASGCCPTGRCGSAPGPTPHGAEPSPP 177
Query: 816 RSAPLAHPGGSTRRQSTGTLRHRRTAH----------PWQRQRSRHGAAHLGPPVLSRSH 965
+P P S R+ T R +A P R G A PP S SH
Sbjct: 178 SQSPSPAPASSGGRRRTHPRPARASAAGATAPACLPPPRCCGRPGTGCARTAPPSTSASH 237
Query: 966 HPP 974
PP
Sbjct: 238 PPP 240
Database: nr
Posted date: Jan 18, 2000 12:56 PM
Number of letters in database: 136,619,797
Number of sequences in database: 443,958
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 764611163
Number of Sequences: 443958
Number of extensions: 18866035
Number of successful extensions: 87704
Number of sequences better than 10.0: 570
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 83771
Number of HSP's gapped (non-prelim): 2340
length of query: 944
length of database: 136,619,797
effective HSP length: 58
effective length of query: 885
effective length of database: 110,870,233
effective search space: 98120156205
effective search space used: 98120156205
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 74 (33.2 bits)