BLASTX 2.0.10 [Aug-26-1999]
Query= XF-07C06-GL52
(510 letters)
Database: nr
443,958 sequences; 136,619,797 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|2134199|pir||I51173 myosin I beta - bullfrog >gi|602138 (U14... 33 1.9
gi|138215|sp|P08355|VGLB_PRVIF GLYCOPROTEIN GII PRECURSOR >gi|7... 32 2.5
gi|2627435 (AF013614) No definition line found [Fugu rubripes] 31 5.6
gi|4981618|gb|AAD36151.1|AE001767_7 (AE001767) hypothetical pro... 31 9.5
>gi|2134199|pir||I51173 myosin I beta - bullfrog >gi|602138 (U14549)
myosin I beta [Rana catesbeiana] >gi|603692 (U14382)
myosin I beta [Rana catesbeiana]
Length = 1028
Score = 32.8 bits (73), Expect = 1.9
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Frame = +1
Query: 91 RRQWTVDRERNF---YLYEGGP--TENQAFTDVFYYGFY--LYLNGTKFVVELDVDRNRK 249
+R+W VD R F ++Y P TEN+ F D Y F LY N K V LD
Sbjct: 744 KRKWAVDVVRRFIKGFIYRNQPRCTENEYFLDYIRYSFLMTLYRNQPKSV--LDKSWPVP 801
Query: 250 PPTFKDNPYVVEWSKLMSIKVWPH 321
PP+ ++ ++ M+ VW +
Sbjct: 802 PPSLREASELLR-EMCMNNMVWKY 824
>gi|138215|sp|P08355|VGLB_PRVIF GLYCOPROTEIN GII PRECURSOR
>gi|73942|pir||VGBEPS glycoprotein gII - suid
herpesvirus 1 >gi|334054 (M17321) glycoprotein gII
precursor [Pseudorabies virus]
Length = 913
Score = 32.5 bits (72), Expect = 2.5
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -1
Query: 249 FTITVHI*FNNKLRPIQIQIKTVIKNICKSLIFSGATFV*IKVTFTIHCPLPTQ--TDV 79
FT + + F + P + + KN+ + ++SG+T+ I FT P+P Q TDV
Sbjct: 152 FTEGIAVLFKENIAPHKFKAHIYYKNVIVTTVWSGSTYAAITNRFTDRVPVPVQEITDV 210
>gi|2627435 (AF013614) No definition line found [Fugu rubripes]
Length = 1782
Score = 31.3 bits (69), Expect = 5.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 349 PPTAWDTPDAPQPLLDNRSLNQFIAILKE 435
P ++ TP+AP PL DN SL +F+ +L +
Sbjct: 1144 PSSSCPTPNAPPPLKDNPSLAEFVPMLTQ 1172
>gi|4981618|gb|AAD36151.1|AE001767_7 (AE001767) hypothetical protein
[Thermotoga maritima]
Length = 986
Score = 30.5 bits (67), Expect = 9.5
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +1
Query: 16 EIPSAED-IEKYGLPFKKDLDLDISLR---------RQWTVDRERNFYLYEGGPTENQAF 165
E+P+ ++ + G+ +K+ D + +L VDR Y GG F
Sbjct: 648 EVPAEDEKVVSTGVLLEKEFDFETALNDFEVKMNSFNVLPVDRVE--YFEAGGRVFRNEF 705
Query: 166 TDVFYYGFYLYLNGTKFVVELDVDRNRKP 252
+Y FY +GT F VE + +KP
Sbjct: 706 VSKIWYEFYRLPDGTPFRVEYSFEVRKKP 734
Database: nr
Posted date: Jan 18, 2000 12:56 PM
Number of letters in database: 136,619,797
Number of sequences in database: 443,958
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146075458
Number of Sequences: 443958
Number of extensions: 3352333
Number of successful extensions: 9266
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9263
Number of HSP's gapped (non-prelim): 5
length of query: 170
length of database: 136,619,797
effective HSP length: 53
effective length of query: 116
effective length of database: 113,090,023
effective search space: 13118442668
effective search space used: 13118442668
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)