BLASTX 2.0.10 [Aug-26-1999] 

Query= XF-06C06-GL24
         (375 letters)

Database: nr
           443,958 sequences; 136,619,797 total letters

                                                                Score     E
Sequences producing significant alignments:                     (bits)  Value

gi|2119578|pir||I51368 gamma-aminobutyric acid transport protei...    31    4.6

>gi|2119578|pir||I51368 gamma-aminobutyric acid transport protein
           GAT-1 - Pacific electric ray >gi|444010|emb|CAA54394|
           (X77139) GAT-1 GABA transporter [Torpedo californica]
           Length = 598
           
 Score = 30.9 bits (68), Expect = 4.6
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -2

Query: 308 FLGKLHLKWC--CLNFWLNLRESLGISPCWWLTLIW 207
           F   + + WC     F++N+ E +G  PC W  L W
Sbjct: 464 FFETVSISWCYGVNRFFVNIEEMVGHKPCLWWKLCW 499


  Database: nr
    Posted date:  Jan 18, 2000 12:56 PM
  Number of letters in database: 136,619,797
  Number of sequences in database:  443,958
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86635553
Number of Sequences: 443958
Number of extensions: 1570744
Number of successful extensions: 4048
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4048
Number of HSP's gapped (non-prelim): 1
length of query: 125
length of database: 136,619,797
effective HSP length: 51
effective length of query: 73
effective length of database: 113,977,939
effective search space: 8320389547
effective search space used: 8320389547
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 65 (29.7 bits)