BLASTX 2.0.10 [Aug-26-1999]
Query= XF-06A08-GL15
(1041 letters)
Database: nr
443,958 sequences; 136,619,797 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|2983560 (AE000722) GDP-D-mannose dehydratase [Aquifex aeolicus] 421 e-117
gi|4071212 (AF047478) GDP-mannose dehydratase; Gmd [Brucella me... 374 e-103
gi|2498416|sp|Q51366|GM4D_PSEAE GDP-MANNOSE 4,6-DEHYDRATASE (GD... 372 e-102
gi|3290168|gb|AAC38668.1| (AF062345) putative GDP-mannose-4,6-d... 371 e-102
gi|6580724|emb|CAB63300.1| (AJ251712) GDP-mannose-4,6-dehydrata... 361 7e-99
gi|2498418|sp|Q56872|GM4D_YEREN PROBABLE GDP-MANNOSE 4,6-DEHYDR... 360 1e-98
gi|3347913|gb|AAC27750.1| (AF072888) nodulation protein NoeL [S... 359 3e-98
gi|2498658|sp|P55354|NOEL_RHISN GDP-MANNOSE 4,6-DEHYDRATASE (GD... 358 3e-98
gi|3877766|emb|CAB04494.1| (Z81553) similar to PROBABLE GDP-MAN... 355 4e-97
gi|5678716|gb|AAD46729.1|AF078736_3 (AF078736) GDP-D-mannose de... 355 4e-97
gi|4504031|ref|NP_001491.1|| GDP-mannose 4,6-dehydratase; GDPMD... 352 3e-96
gi|2506907|sp|P32054|GM4D_ECOLI GDP-MANNOSE 4,6-DEHYDRATASE (GD... 349 2e-95
gi|6573398|pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase 349 2e-95
gi|5478239|gb|AAD43839.1|AF076290_9 (AF076290) putative GDP-D-m... 349 3e-95
gi|3435177 (AF061251) GDP-D-mannose dehydratase Gmd [Escherichi... 349 3e-95
gi|5824413|emb|CAA92455.2| (Z68215) similar to GDP-D-mannose de... 347 6e-95
gi|1131462|gb|AAC96486.1| (U42580) similar to Yersinia GDP-D-ma... 346 1e-94
gi|1651657|dbj|BAA16585| (D90899) GDP-D-mannose dehydratase [Sy... 343 1e-93
gi|4097914 (U72147) putative GDP-D-mannose dehydratase [Anabaen... 342 2e-93
gi|2738478 (AF004385) RfbDO22-1 [Vibrio cholerae] >gi|3721676|d... 341 5e-93
gi|6016140|sp|Q56598|GM4D_VIBCH PROBABLE GDP-MANNOSE 4,6-DEHYDR... 340 8e-93
gi|2621389 (AE000818) GDP-D-mannose dehydratase [Methanobacteri... 337 7e-92
gi|1002384 (U24571) rfbD-like gene; putative GDP-D-mannose dehy... 336 2e-91
gi|3258631 (AF040260) GDP-D-mannose-4,6-dehydratase [Homo sapiens] 336 2e-91
gi|280159|pir||S28470 rfbD protein - Vibrio cholerae >gi|48385|... 335 3e-91
gi|3550478|emb|CAA11575| (AJ223833) gsbA [Mycobacterium avium s... 331 7e-90
gi|3550473|emb|CAA11571| (AJ223832) gsbA [Mycobacterium avium s... 330 1e-89
gi|4416473|gb|AAD20373| (AF125999) GDP-D-mannose-dehydratase md... 330 2e-89
gi|1524258|emb|CAB02025| (Z79701) gmdA [Mycobacterium tuberculo... 328 6e-89
gi|1107926|emb|CAA62143| (X90547) GDP-D-mannose 4,6-dehydratase... 327 1e-88
gi|4154547 (AE001443) GDP-D-mannose dehydratase [Helicobacter p... 322 3e-87
gi|2313119|gb|AAD07112.1| (AE000526) GDP-D-mannose dehydratase ... 320 1e-86
gi|6319186|gb|AAF07199.1|AF195140_1 (AF195140) GDP-D-mannose 4,... 312 2e-84
gi|1764100 (U81805) GDP-D-mannose-4,6-dehydratase [Arabidopsis ... 309 3e-83
gi|1073345|pir||C55239 cpsB 5'-region hypothetical protein 1 - ... 303 2e-81
gi|6562268|emb|CAB62638.1| (AL132980) GDP-D-mannose-4, 6-dehydr... 303 2e-81
gi|1651998|dbj|BAA16924| (D90901) GDP-D-mannose dehydratase [Sy... 260 1e-68
gi|4321414|gb|AAD15751.1| (AF049343) GDP-mannose dehydratase [E... 221 8e-57
gi|2909577|emb|CAA17306| (AL021926) gca [Mycobacterium tubercul... 96 6e-19
gi|3249547 (AF009955) oxidoreductase Rmd [Pseudomonas aeruginosa] 88 1e-16
gi|6458415|gb|AAF10287.1|AE001927_6 (AE001927) UDP-glucose 4-ep... 82 8e-15
gi|4234783|gb|AAD12951.1| (AF078135) unknown [Leptospira borgpe... 79 5e-14
gi|4972096|emb|CAB43892.1| (AL078468) UDPglucose 4-epimerase-li... 76 5e-13
gi|5814300|gb|AAD52168.1|AF144879_7 (AF144879) unknown [Leptosp... 74 2e-12
gi|2650312 (AE001082) dTDP-glucose 4,6-dehydratase (rfbB) [Arch... 73 5e-12
gi|1710104|sp|P55295|RFBB_XANCA DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 72 9e-12
gi|3258173|dbj|BAA30856.1| (AP000007) 306aa long hypothetical U... 71 2e-11
gi|5457737|emb|CAB49227.1| (AJ248284) UDP-glucose 4-epimerase (... 71 2e-11
gi|1944159|dbj|BAA19633| (AB002668) dTDP-D-glucose-4,6-dehydrat... 69 6e-11
gi|4981021|gb|AAD35594.1|AE001727_6 (AE001727) UDP-glucose 4-ep... 68 1e-10
gi|5739472|gb|AAD50494.1|AF172324_12 (AF172324) WbnF [Escherich... 68 2e-10
gi|3135674 (AF064070) putative dTDP-D-glucose 4,6-dehydratase [... 67 3e-10
gi|3132254|dbj|BAA28131| (AB010415) dTDP-D-glucose-4,6-dehydrat... 67 3e-10
gi|5545317|dbj|BAA82532.1| (AB030032) dTDP-D-glucose 4,6-dehydr... 67 3e-10
gi|5458599|emb|CAB50087.1| (AJ248286) dTDP-glucose 4,6-dehydrat... 66 4e-10
gi|2129578|pir||S58282 dTDP-glucose 4-6-dehydratases homolog - ... 66 7e-10
gi|4679656|emb|CAB41308.1| (AL033517) GMDS (GDP-mannose 4,6-deh... 66 7e-10
gi|6688597|emb|CAB65206.1| (AJ007311) RmlB protein [Legionella ... 66 7e-10
gi|1223961 (U29691) CDP-tyvelose epimerase [Yersinia pseudotube... 65 9e-10
gi|729026|sp|P39858|CAPI_STAAU CAPI PROTEIN >gi|506705 (U10927)... 65 9e-10
gi|4539370|emb|CAB40064.1| (AL049525) UDP-galactose 4-epimerase... 65 1e-09
gi|3738279|gb|AAC63621.1| (AC005309) putative nucleotide-sugar ... 64 1e-09
gi|6522623|emb|CAB62035.1| (AL133298) dTDP-glucose 4-6-dehydrat... 64 2e-09
gi|3513739 (AF080118) Similar to uridine diphosphate glucose ep... 64 2e-09
gi|585828|sp|P37761|RFBB_NEIGO DTDP-GLUCOSE 4,6-DEHYDRATASE >gi... 64 3e-09
gi|1350580|sp|P14169|RFBE_SALTI CDP-TYVELOSE-2-EPIMERASE >gi|86... 63 4e-09
gi|96686|pir||B33604 rfbE protein - Salmonella sp 63 4e-09
gi|3256817|dbj|BAA29500| (AP000002) 336aa long hypothetical dTD... 63 4e-09
gi|4539118|emb|CAB39839.1| (AL049491) putative dTDP-(glucose or... 62 6e-09
gi|4574160|gb|AAD23919.1|AF083467_3 (AF083467) dTDP-D-glucose 4... 62 8e-09
gi|2621713 (AE000844) UDP-glucose 4-epimerase [Methanobacterium... 62 1e-08
gi|418374|sp|P33119|GALE_CORDI UDP-GLUCOSE 4-EPIMERASE (GALACTO... 62 1e-08
gi|3033515|gb|AAC12869.1| (AF044332) dTDP-D-glucose-4,6-dehydra... 61 1e-08
gi|3927825|gb|AAC79582.1| (AC005727) putative nucleotide-sugar ... 61 2e-08
gi|1710103|sp|P55294|RFBB_NEIME DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 61 2e-08
gi|2708270 (U78089) UDP-glucose epimerase [Brucella abortus] 60 3e-08
gi|3891921|pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase Fro... 60 3e-08
gi|421103|pir||S30682 hypothetical protein o355 - Escherichia c... 60 3e-08
gi|2506450|sp|P27830|RFFG_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 60 3e-08
gi|3891922|pdb|1BXK|B Chain B, Dtdp-Glucose 4,6-Dehydratase Fro... 60 3e-08
gi|2072420 (U75690) GDP-D-mannose dehydratase [Anabaena PCC7120] 60 3e-08
gi|2104387|emb|CAB08730| (Z95390) rmlB [Mycobacterium tuberculo... 60 4e-08
gi|2738953 (AF021920) GDP-D-mannose dehydratase homolog [Brucel... 60 4e-08
gi|6015647|emb|CAB57474.1| (Y18930) dTDP-glucose 4,6-dehydratas... 59 5e-08
gi|604222 (U09349) UDP-glucose 4-epimerase [Azospirillum brasil... 59 7e-08
gi|1653034|dbj|BAA17951| (D90910) UDP-glucose 4-epimerase [Syne... 59 7e-08
gi|1730193|sp|P55180|GALE_BACSU UDP-GLUCOSE 4-EPIMERASE (GALACT... 59 7e-08
gi|2116765|dbj|BAA20116| (D86418) YfnG [Bacillus subtilis] >gi|... 59 7e-08
gi|3832507 (AF097519) dTDP-D-glucose 4,6 dehydratase [Klebsiell... 59 9e-08
gi|1143204 (U34305) ORF2; Method: conceptual translation suppl... 58 1e-07
gi|1230585 (U47057) nucleotide sugar epimerase [Vibrio cholerae... 58 1e-07
gi|3721693|dbj|BAA33643.1| (AB012957) probable nucleotide sugar... 58 1e-07
gi|1890603|emb|CAB01951| (Z79692) ExpA9 [Sinorhizobium meliloti] 58 1e-07
gi|1173555 (U31544) UDP-galactose-4-epimerase [Pisum sativum] 58 1e-07
gi|4234803|gb|AAD12971.1| (AF078135) RmlB [Leptospira borgpeter... 57 2e-07
gi|1172921|sp|P44914|RFFG_HAEIN DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 57 3e-07
gi|1314581 (U51197) dTDP-D-glucose-4,6-dehydratase [Sphingomona... 57 3e-07
gi|6009649|dbj|BAA85007.1| (AB025970) ORF2P [Plesiomonas shigel... 57 3e-07
gi|6009798|dbj|BAA85072.1| (AB028135) ORF2S [Shigella sonnei] 57 3e-07
gi|1098478 (L09189) dTDP-D-glucose 4,6-dehydratase [Neisseria m... 57 3e-07
gi|6469141|emb|CAB61752.1| (AJ275318) dTDP-glucose 4-6-dehydrat... 57 3e-07
gi|2494660|sp|Q45291|GALE_BRELA UDP-GLUCOSE 4-EPIMERASE (GALACT... 57 3e-07
gi|2622920 (AE000933) dTDP-glucose 4,6-dehydratase [Methanobac... 57 3e-07
gi|2983750 (AE000735) nucleotide sugar epimerase [Aquifex aeoli... 57 3e-07
gi|3135690 (AF064070) putative UDP-glucose 4-epimerase [Burkhol... 56 4e-07
gi|4406251|gb|AAD19915.1| (AF105113) dTDP-glucose-4,6-dehydrata... 56 4e-07
gi|1001273|dbj|BAA10518| (D64003) dTDP-glucose 4,6-dehydratase ... 56 4e-07
gi|2959983|emb|CAA10917.1| (AJ222661) UDP-glucuronic acid epime... 56 4e-07
gi|2804685 (AF030359) dTDP-glucose-4,6-dehydratase [Streptococc... 56 4e-07
gi|2804691 (AF030360) dTDP-glucose-4,6-dehydratase [Streptococc... 56 4e-07
gi|5104852|dbj|BAA80166.1| (AP000061) 330aa long hypothetical d... 56 4e-07
gi|2105060|emb|CAB08849| (Z95436) rmlB2 [Mycobacterium tubercul... 56 6e-07
gi|2583123|gb|AAB82632.1| (AC002387) putative nucleotide sugar ... 56 6e-07
gi|1881546 (U09239) dTDP-glucose-4,6-dehydratase [Streptococcus... 55 7e-07
gi|3907612|gb|AAC78676.1| (AF094575) dTDP-glucose-4,6-dehydrata... 55 7e-07
gi|2326949 (U43540) rhamnose biosynthesis protein [Mycobacteriu... 55 7e-07
gi|1651976|dbj|BAA16902| (D90901) CDP-glucose 4,6-dehydratase [... 55 1e-06
gi|2983546 (AE000721) UDP-glucose-4-epimerase [Aquifex aeolicus] 55 1e-06
gi|1169830|sp|P13226|GALE_STRLI UDP-GLUCOSE 4-EPIMERASE (GALACT... 55 1e-06
gi|132499|sp|P26391|RFBB_SALTY DTDP-GLUCOSE 4,6-DEHYDRATASE >gi... 55 1e-06
gi|4981151|gb|AAD35714.1|AE001737_7 (AE001737) nucleotide sugar... 55 1e-06
gi|1944622|emb|CAB05932| (Z83335) dTDP-glucose 4,6-dehydratase ... 54 2e-06
gi|6460562|gb|AAF12268.1|AE001862_94 (AE001862) thymidine dipho... 54 2e-06
gi|549563|sp|P35675|YGAE_ERWAM HYPOTHETICAL PROTEIN IN GALE 3'R... 54 2e-06
gi|2494672|sp|P95780|RMLB_STRMU DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 54 2e-06
gi|3061300|dbj|BAA25656| (AB005901) deduced dNDP-hexose 4,6-deh... 54 2e-06
gi|4741795|gb|AAD28704.1|AF101047_5 (AF101047) putative dTDP-D-... 54 2e-06
gi|1870164|emb|CAB05928| (Z83335) unknown [Streptococcus pneumo... 54 2e-06
gi|1552867|emb|CAB02463| (Z80343) epiB [Mycobacterium tuberculo... 53 4e-06
gi|2650268 (AE001079) UDP-glucose 4-epimerase (galE-1) [Archaeo... 53 4e-06
gi|2494668|sp|Q57664|GALE_METJA PUTATIVE UDP-GLUCOSE 4-EPIMERAS... 53 5e-06
gi|3193316 (AF069299) contains similarity to nucleotide sugar e... 53 5e-06
gi|2121111|pir||I55054 dTDP-D-glucose 4,6-dehydratase - Escheri... 53 5e-06
gi|2506451|sp|P37759|RBB1_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 53 5e-06
gi|3093975 (AF059755) nucleotide sugar epimerase [Vibrio vulnif... 52 6e-06
gi|5281036|emb|CAB45972.1| (AL080318) nucleotide sugar epimeras... 52 8e-06
gi|68391|pir||XUSMUG UDPglucose 4-epimerase (EC 5.1.3.2) - Stre... 52 8e-06
gi|3087757|emb|CAA66078| (X97448) galE [Brucella melitensis] 52 8e-06
gi|1752648|emb|CAA71250| (Y10168) glucose epimerase [Bacillus t... 52 8e-06
gi|6015668|emb|CAB57495.1| (Y18930) dTDP-glucose 4,6-dehydratas... 52 1e-05
gi|1666507 (U61226) RfbB [Leptospira interrogans] >gi|5814320|g... 52 1e-05
gi|3608396 (AF071085) putative dTDP-glucose-4,6-dehydratase [En... 51 1e-05
gi|2506452|sp|P37777|RFBB_SHIFL DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 51 1e-05
gi|2146021|pir||S49054 dTDPglucose 4,6-dehydratase (EC 4.2.1.46... 51 2e-05
gi|4836876|gb|AAD30579.1|AC007260_10 (AC007260) Similar to dTDP... 51 2e-05
gi|5459017|emb|CAB50503.1| (AJ248288) UDP-glucose 4-epimerase (... 50 2e-05
gi|6598832|gb|AAF18687.1|AC010795_2 (AC010795) putative UDP-glu... 50 2e-05
gi|3021355|emb|CAA06338.1| (AJ005081) UDP-galactose 4-epimerase... 50 2e-05
gi|465550|sp|Q04871|YCL2_ECOLI HYPOTHETICAL 37.6 KD PROTEIN IN ... 50 2e-05
gi|2558973 (AF025396) DdhB [Vibrio anguillarum] 50 3e-05
gi|3256770|dbj|BAA29453| (AP000002) 318aa long hypothetical UDP... 50 3e-05
gi|119687|sp|P26503|EXOB_RHIME UDP-GLUCOSE 4-EPIMERASE (GALACTO... 50 4e-05
gi|2494667|sp|Q57301|GALE_YEREN UDP-GLUCOSE 4-EPIMERASE (GALACT... 49 6e-05
gi|4995692|emb|CAB44218.1| (AJ011653) UDP-galactose 4-epimerase... 49 7e-05
gi|2921560|gb|AAC04827.1| (AF039306) UDP-glucose 4'-epimerase [... 49 7e-05
gi|132502|sp|P26397|RFBG_SALTY CDP-GLUCOSE 4,6-DEHYDRATASE >gi|... 48 1e-04
gi|4128133|emb|CAA06840| (AJ006068) dTDP-D-glucose 4,6-dehydrat... 48 1e-04
gi|2842588|sp|Q58455|YA55_METJA HYPOTHETICAL PROTEIN MJ1055 >gi... 48 1e-04
gi|4581414|emb|CAB40159.1| (AL031295) dJ886K2.3(GALE (UDP-galac... 48 1e-04
gi|1710031|sp|P55293|RBB2_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 48 1e-04
gi|2129759|pir||S62783 UDPglucose 4-epimerase (EC 5.1.3.2) - Ar... 48 2e-04
gi|1197641 (U46859) DdhB [Yersinia enterocolitica (type 0:8)] 47 2e-04
gi|4008544|emb|CAA22513| (AL034492) putative nucleotide-sugar d... 47 2e-04
gi|2621436 (AE000823) UDP-glucose 4-epimerase related protein [... 47 2e-04
gi|4234785|gb|AAD12953.1| (AF078135) unknown [Leptospira borgpe... 47 2e-04
gi|3874971|emb|CAB16861.1| (Z99709) similar to NAD dependant ep... 47 3e-04
gi|581659|emb|CAA50767| (X71970) rfbB [Shigella flexneri] 47 3e-04
gi|541221|pir||S41534 rfbB protein - Shigella flexneri 47 3e-04
gi|4503891|ref|NP_000394.1|| galactose-4-epimerase, UDP- >gi|24... 46 4e-04
gi|633875|bbs|154466 (S72887) CDP-D-glucose 4,6-dehydratase, Eo... 46 6e-04
gi|544367|sp|P35673|GALE_ERWAM UDP-GLUCOSE 4-EPIMERASE (GALACTO... 46 6e-04
gi|730819|sp|P39630|SPSJ_BACSU SPORE COAT POLYSACCHARIDE BIOSYN... 45 0.001
gi|609642 (L33181) CDP-D-glucose-4,6-dehydratase [Yersinia pseu... 45 0.001
gi|421277|pir||D47070 CDP-glucose-4,6-dehydratase - Yersinia ps... 45 0.001
gi|3451497|emb|CAA07653.1| (AJ007747) putative nucleotide sugar... 44 0.002
gi|120930|sp|P09609|GALX_KLULA GAL10 BIFUNCTIONAL PROTEIN [INCL... 44 0.002
gi|4206182 (U60828) UDP-galactose-4-epimerase [Lactococcus lactis] 43 0.004
gi|3703056 (AF082008) UDP-galactose-4-epimerase [Lactococcus la... 43 0.004
gi|2621441 (AE000823) UDP-glucose 4-epimerase homolog [Methanob... 43 0.004
gi|2983012 (AE000684) ADP-L-glycero-D-manno-heptose-6-epimerase... 42 0.009
gi|5051487|emb|CAB44766.1| (AL078627) UDP glucose NAD dependant... 42 0.009
gi|120922|sp|P18645|GALE_RAT UDP-GLUCOSE 4-EPIMERASE (GALACTOWA... 41 0.012
gi|2494663|sp|Q59678|GALE_PASHA UDP-GLUCOSE 4-EPIMERASE (GALACT... 40 0.028
gi|2496715|sp|P55579|Y4NG_RHISN HYPOTHETICAL 42.8 KD PROTEIN Y4... 39 0.062
gi|1174963|sp|Q04973|VIPB_SALTI VI POLYSACCHARIDE BIOSYNTHESIS ... 39 0.082
gi|6090551|emb|CAB58730.1| (AL122032) putative cinnamoyl-coa re... 39 0.082
gi|462155|sp|Q05026|GALE_NEIGO UDP-GLUCOSE 4-EPIMERASE (GALACTO... 36 0.54
gi|1765995 (U76617) UDP-glucose- 4-epimerase [Pasteurella multo... 35 1.2
gi|98916|pir||S18542 hypothetical protein 4 - Streptomyces coel... 34 1.6
gi|2058313|emb|CAA66063| (X97433) cinnamoyl-CoA reductase [Euca... 34 2.7
gi|2239260|emb|CAA74071| (Y13734) cinnamoyl CoA reductase [Zea ... 34 2.7
gi|3242328|emb|CAA66707| (X98083) cinnamoyl-CoA reductase [Zea ... 34 2.7
gi|2058311|emb|CAA56103| (X79566) cinnamoyl-CoA reductase [Euca... 34 2.7
gi|3341511|emb|CAA13176| (AJ231134) cinnamoyl-CoA reductase [Sa... 34 2.7
gi|2127363|pir||I40869 ORF4 - Clostridium perfringens (fragment... 33 3.6
gi|5924379|gb|AAD56579.1|AF184272_1 (AF184272) dihydroflavonol ... 33 4.7
gi|6503293|gb|AAF14669.1|AC011713_17 (AC011713) Similar to gb|X... 33 4.7
gi|6587801|gb|AAF18492.1|AC010924_5 (AC010924) Strong similarit... 33 4.7
>gi|2983560 (AE000722) GDP-D-mannose dehydratase [Aquifex aeolicus]
Length = 345
Score = 421 bits (1072), Expect = e-117
Identities = 199/339 (58%), Positives = 252/339 (73%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 180
M K A+ITGI GQDGAYLA+LLLE GY VYG RRS WR+ ELGI K+ +
Sbjct: 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKI--IH 58
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
DL + S+ +R +E P EVYNLAAQSFVGVSF+QP+ T ++ +G + +LEA+R V P
Sbjct: 59 MDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKP 118
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
+FYQASTSEMFGKVQ+ PQ E+TPFYPRSPY +AKL+ HW+TVNYRE+Y +FA SGIL
Sbjct: 119 DTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGIL 178
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FNHESPLR +FVTRKIT+++A IK G D L LGNL+AKRDWG+A EYV+ MW M+Q
Sbjct: 179 FNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP 238
Query: 721 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 900
EPD +V+AT T TVR+FV AA +EW G+ E G+D +GK +V ++ +F+RP
Sbjct: 239 EPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRP 298
Query: 901 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRR 1017
AEVD+L+GNP KA KLGW+P+TT +EL +MMEAD++R
Sbjct: 299 AEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR 337
>gi|4071212 (AF047478) GDP-mannose dehydratase; Gmd [Brucella
melitensis]
Length = 362
Score = 374 bits (949), Expect = e-103
Identities = 187/340 (55%), Positives = 247/340 (72%), Gaps = 5/340 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPK---LHLVE 180
K A+ITGITGQDGAYLA+LLL+ GY V+G RR+S N RI+ L H + L L
Sbjct: 3 KVALITGITGQDGAYLAELLLQKGYAVHGIKRRTSQFNTARIDHLYHDPHEQGVDLTLHH 62
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN- 357
DLTD SS VR+++L P EVYNL AQS V VSF++P T + +GA+ LLEAIRI+
Sbjct: 63 GDLTDTSSLVRIMQLVRPDEVYNLGAQSHVAVSFEEPEYTANSDALGALRLLEAIRILGM 122
Query: 358 -PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 534
+ R+YQASTSE++G VQ+ PQ E TPFYPRSPY AKLYA+W+TVNYRE+YGI+A +G
Sbjct: 123 EKQTRYYQASTSELYGLVQEIPQKETTPFYPRSPYAAAKLYAYWITVNYREAYGIYACNG 182
Query: 535 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 714
ILFNHESPLR FVTRKIT A+A IK+G + L LGNLD+ RDWG A++YV+ W MLQ
Sbjct: 183 ILFNHESPLRGETFVTRKITRALARIKIGNQNRLYLGNLDSLRDWGHARDYVEMQWLMLQ 242
Query: 715 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 894
D+P+ FV+AT + +VR+FV+LAA + I++ W+G E E G D +G +V ++P+++
Sbjct: 243 QDQPEDFVIATGKQYSVREFVTLAAKDIGIEMRWEGSGEAEKGYDAKTGACIVEVDPRYF 302
Query: 895 RPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
RPAEV+ L+G+ KA KLGW+PK + E L M+ D+ + R+
Sbjct: 303 RPAEVETLLGDATKAHQKLGWKPKISFETLVSEMIAEDLAAAARE 347
>gi|2498416|sp|Q51366|GM4D_PSEAE GDP-MANNOSE 4,6-DEHYDRATASE
(GDP-D-MANNOSE DEHYDRATASE) >gi|755218 (U18320) GCA
[Pseudomonas aeruginosa]
Length = 323
Score = 372 bits (945), Expect = e-102
Identities = 190/340 (55%), Positives = 242/340 (70%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
+SA++TGITGQDGAYLA+LLLE GY V+G R SS WR+ ELGI + + D+
Sbjct: 3 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI--EGDIQYEDGDM 60
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
D S R + A P+EVYNLAAQSFVG S++QP+TT + G+G +LLEAIR +P+ R
Sbjct: 61 ADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR 120
Query: 370 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 549
FYQASTSEMFG +Q Q E TPFYPRSPYG+ KLY HW+TVNYRE++G+ A+SGILFNH
Sbjct: 121 FYQASTSEMFGLIQAERQDENTPFYPRSPYGVVKLYGHWITVNYRENFGLHASSGILFNH 180
Query: 550 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 729
ESPLR +FVTRK+T A+A IKLGK L+LGN+D KRDWGF +YV+ MW MLQ D+ D
Sbjct: 181 ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDVKRDWGFGGDYVEAMWLMLQQDKAD 240
Query: 730 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 909
+V+AT T TVRD +A V G+D + + I+P F+RPAEV
Sbjct: 241 DYVVATVVTTTVRDMCQIAFEHV--------------GLDY---RDFLKIDPAFFRPAEV 283
Query: 910 DLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
D+L+GNPAKA+ LGW+P+T+L+EL MM+EAD+RR R+
Sbjct: 284 DVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVSRE 323
>gi|3290168|gb|AAC38668.1| (AF062345) putative
GDP-mannose-4,6-dehydratase; LpsA [Caulobacter
crescentus]
Length = 325
Score = 371 bits (942), Expect = e-102
Identities = 189/340 (55%), Positives = 241/340 (70%), Gaps = 2/340 (0%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFW--RINELGIAQHPKLHLVEY 183
K+A+ITG+TGQDGAYLA+LLLE GY V+G RRS+S + R+ +G+ + L
Sbjct: 3 KTALITGVTGQDGAYLAKLLLEKGYTVHGMLRRSASADVIGDRLRWIGVYDDIQFELG-- 60
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 363
DL D RL+ P EVYNLAAQSFVG S+DQP T +TG+G N+LEA+R+ P+
Sbjct: 61 DLLDEGGLARLMRRLQPDEVYNLAAQSFVGASWDQPHLTGSVTGLGTTNMLEAVRLECPQ 120
Query: 364 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
RFYQAS+SEM+G VQ Q E TPFYPRSPY +AKLYAHWMTVNYRES+G+ A++GILF
Sbjct: 121 ARFYQASSSEMYGLVQHPIQSETTPFYPRSPYAVAKLYAHWMTVNYRESFGLHASAGILF 180
Query: 544 NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 723
NHESPLR +FVTRK+T A+A IKLG+ + LGNLDAKRDWG AK+YV+ MW MLQ +
Sbjct: 181 NHESPLRGIEFVTRKVTDAVAAIKLGQQKTVDLGNLDAKRDWGHAKDYVEAMWLMLQQET 240
Query: 724 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 903
PD +V+AT +T TVR +A + V + + VTINPKF RPA
Sbjct: 241 PDDYVVATGKTWTVRQMCEVAFAHVGLNYQ-----------------DHVTINPKFLRPA 283
Query: 904 EVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
EVDLL+G+PAKA+ KLGWEPKTT++++ M++AD+ R R+
Sbjct: 284 EVDLLLGDPAKAKAKLGWEPKTTMQQMIAEMVDADIARRSRN 325
>gi|6580724|emb|CAB63300.1| (AJ251712) GDP-mannose-4,6-dehydratase
[Yersinia pseudotuberculosis]
Length = 373
Score = 361 bits (916), Expect = 7e-99
Identities = 183/339 (53%), Positives = 246/339 (71%), Gaps = 15/339 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVE 180
K A+ITGITGQDG+YLA+ LLE GY V+G RR+SS N RI+ + +H P+ L
Sbjct: 3 KIALITGITGQDGSYLAEFLLEKGYEVHGIKRRASSFNTSRIDHIYQDRHETNPRFFLHY 62
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI--V 354
DLTD S+ +RL++ P E+YNL AQS V VSF+ P T D+ +G + LLEAIRI +
Sbjct: 63 GDLTDTSNLIRLVQEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRINGL 122
Query: 355 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 534
K RFYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+TVNYRESYG++A +G
Sbjct: 123 EKKTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKMYAYWITVNYRESYGMYACNG 182
Query: 535 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 714
ILFNHESP R FVTRKIT A+A I LG L LGN+D+ RDWG AK+YV W MLQ
Sbjct: 183 ILFNHESPRRGETFVTRKITRAVANIALGLEKCLYLGNIDSLRDWGHAKDYVRMQWMMLQ 242
Query: 715 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------SGK 864
D+P+ FV+AT + TVR+FV ++A I+LE+ G+ E VA G
Sbjct: 243 QDKPEDFVIATGKQITVREFVRMSAREAGIELEFSGEGVEEVATVVAINGNHISSVNIGD 302
Query: 865 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 1026
+V ++P+++RPAEV+ L+G+P KA+ LGW P+ T+EE+C M+ +D+ ++++
Sbjct: 303 VIVRVDPRYFRPAEVETLLGDPTKAKKVLGWVPEITVEEMCAEMVASDLEQAKQ 356
>gi|2498418|sp|Q56872|GM4D_YEREN PROBABLE GDP-MANNOSE 4,6-DEHYDRATASE
(GDP-D-MANNOSE DEHYDRATASE) (ORF13.7) >gi|1197652
(U46859) Gmd [Yersinia enterocolitica (type 0:8)]
Length = 372
Score = 360 bits (914), Expect = 1e-98
Identities = 182/339 (53%), Positives = 245/339 (71%), Gaps = 15/339 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVE 180
K A+ITGITGQDG+YLA+ LLE GY V+G RRSSS N RI+ + H P L
Sbjct: 2 KKALITGITGQDGSYLAEFLLEKGYQVHGIKRRSSSFNTSRIDHIYQDPHEVNPHFFLHY 61
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI--V 354
DLTD S+ +RL++ P E+YNL AQS V VSF+ P T D+ +G + LLEA+RI +
Sbjct: 62 GDLTDTSNLIRLVKEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAVRINGL 121
Query: 355 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 534
K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AK+YA+W+TVNYRESYG++A +G
Sbjct: 122 EHKTRFYQASTSELYGLVQEIPQRETTPFYPRSPYAVAKMYAYWITVNYRESYGMYACNG 181
Query: 535 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 714
ILFNHESP R + FVTRKIT AIA I LG D L LGN+D+ RDWG AK+YV W MLQ
Sbjct: 182 ILFNHESPRRPQTFVTRKITRAIANIALGLEDCLYLGNMDSLRDWGHAKDYVRMQWMMLQ 241
Query: 715 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQA----------ERECGVDVASGK 864
D+P+ FV+AT + TVR+FV ++A I++E+ G+ E G
Sbjct: 242 QDQPEDFVIATGKQITVREFVRMSAKEAGIEIEFSGKGIDEIATISAISDEYATSAKVGD 301
Query: 865 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 1026
+V ++P+++RPAEV+ L+G+P+KA+ KLGW P+ T+EE+C M+ D++++++
Sbjct: 302 IIVRVDPRYFRPAEVETLLGDPSKAKKKLGWVPEITVEEMCAEMVAGDLQQAKQ 355
>gi|3347913|gb|AAC27750.1| (AF072888) nodulation protein NoeL
[Sinorhizobium fredii]
Length = 351
Score = 359 bits (911), Expect = 3e-98
Identities = 180/331 (54%), Positives = 238/331 (71%), Gaps = 6/331 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 180
K A+I+G+TGQDGAYLA+LLL+ GY+V+G RRSSS N RI + +H + L
Sbjct: 5 KVALISGVTGQDGAYLAELLLDEGYIVHGIKRRSSSFNTQRIEHIYQERHDPEARFFLHY 64
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN- 357
D+TD ++ +R+++ P E+YNLAAQS V VSF+ P T + +G + +LEAIRI+
Sbjct: 65 GDMTDSTNLLRIVQQTQPHEIYNLAAQSHVQVSFETPEYTANADAIGTLRMLEAIRILGL 124
Query: 358 -PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 534
+ RFYQASTSE++G Q+ PQ E+TPFYPRSPY AKLYA+W+ VNYRE+YG+ A++G
Sbjct: 125 IHRTRFYQASTSELYGLAQEIPQNEKTPFYPRSPYAAAKLYAYWIVVNYREAYGMHASNG 184
Query: 535 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 714
ILFNHESPLR FVTRKIT A A I LGK +VL LGNLDA+RDWG A+EYV GMW M Q
Sbjct: 185 ILFNHESPLRGETFVTRKITRAAAAISLGKQEVLYLGNLDAQRDWGHAREYVRGMWMMCQ 244
Query: 715 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 894
D P +VLAT T +VR FV A + +EW G+ E G+D A+GK +V ++P+++
Sbjct: 245 QDRPGDYVLATGVTTSVRTFVEWAFEETGMTIEWVGEGIEERGIDAATGKCVVAVDPRYF 304
Query: 895 RPAEVDLLIGNPAKARTKLGWEPKTTLEEL-CHMMME 1002
RP EVDLL+G+ KAR LGW +T++ +L C M+ E
Sbjct: 305 RPTEVDLLLGDATKARQVLGWRHETSVRDLACEMVRE 341
>gi|2498658|sp|P55354|NOEL_RHISN GDP-MANNOSE 4,6-DEHYDRATASE
(GDP-D-MANNOSE DEHYDRATASE) >gi|2182295 (AE000064) NoeL
[Rhizobium sp. NGR234]
Length = 351
Score = 358 bits (910), Expect = 3e-98
Identities = 179/331 (54%), Positives = 239/331 (72%), Gaps = 6/331 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 180
K A+I+G+TGQDGAYLA+LLL+ GY+V+G RRSSS N RI + +H + L
Sbjct: 5 KVALISGVTGQDGAYLAELLLDEGYIVHGIKRRSSSFNTQRIEHIYQERHDPEARFFLHY 64
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN- 357
D+TD ++ +R+++ P E+YNLAAQS V VSF+ P T + +G + +LEAIRI+
Sbjct: 65 GDMTDSTNLLRIVQQTQPHEIYNLAAQSHVQVSFETPEYTANADAIGTLRMLEAIRILGL 124
Query: 358 -PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 534
+ RFYQASTSE++G Q++PQ E+TPFYPRSPY AKLYA+W+ VNYRE+YG+ A++G
Sbjct: 125 TNRTRFYQASTSELYGLAQESPQNEKTPFYPRSPYAAAKLYAYWIVVNYREAYGMHASNG 184
Query: 535 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 714
ILFNHESPLR FVTRKIT A A I LGK +VL LGNLDA+RDWG A+EYV GMW M Q
Sbjct: 185 ILFNHESPLRGETFVTRKITRAAAAISLGKQEVLYLGNLDAQRDWGHAREYVRGMWMMCQ 244
Query: 715 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 894
D P +VLAT T +VR FV A + +EW G+ E G+D A+G+ +V ++P+++
Sbjct: 245 QDRPGDYVLATGVTTSVRTFVEWAFEETGMTIEWVGEGIEERGIDAATGRCVVAVDPRYF 304
Query: 895 RPAEVDLLIGNPAKARTKLGWEPKTTLEEL-CHMMME 1002
RP EVDLL+G+ KAR LGW +T++ +L C M+ E
Sbjct: 305 RPTEVDLLLGDATKARQVLGWRHETSVRDLACEMVRE 341
>gi|3877766|emb|CAB04494.1| (Z81553) similar to PROBABLE GDP-MANNOSE
4,6-DEHYDRATASE (EC 4.2.1.47) (GDP-D-MANNOSE DEHYDRATASE)
(FRAGMENT) [Caenorhabditis elegans]
Length = 382
Score = 355 bits (901), Expect = 4e-97
Identities = 184/340 (54%), Positives = 238/340 (69%), Gaps = 9/340 (2%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLH------ 171
K A+ITGITGQDG+YLA+LLL GY V+G RRSSS N RI L +P H
Sbjct: 34 KVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHL--YGNPVTHNGSASF 91
Query: 172 -LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
L D+TD S ++L+ P E+Y+LAAQS V VSFD P T ++ VG + LL+AI
Sbjct: 92 SLHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIH 151
Query: 349 I--VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIF 522
+ K+RFYQASTSE++GKVQ+ PQ E TPFYPRSPY +AK+Y +W+ VNYRE+Y +F
Sbjct: 152 ACRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMYGYWIVVNYREAYKMF 211
Query: 523 AASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMW 702
A +GILFNHESP R FVTRKIT ++A I L + + ++LGNL A RDWG AKEYV+ MW
Sbjct: 212 ACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNLSALRDWGHAKEYVEAMW 271
Query: 703 RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTIN 882
R+LQ D PD FV+AT + +VR+F +LA + + QL W+G+ E G + G V ++
Sbjct: 272 RILQQDTPDDFVIATGKQFSVREFCNLAFAEIGEQLVWEGEGVDEVGKN-QDGVVRVKVS 330
Query: 883 PKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
PK+YRP EV+ L+GNPAKAR LGWEPK T+ EL M+ +D+ E D
Sbjct: 331 PKYYRPTEVETLLGNPAKARKTLGWEPKITVPELVKEMVASDIALMEAD 379
>gi|5678716|gb|AAD46729.1|AF078736_3 (AF078736) GDP-D-mannose
dehydratase [Escherichia coli]
Length = 372
Score = 355 bits (901), Expect = 4e-97
Identities = 183/341 (53%), Positives = 243/341 (70%), Gaps = 15/341 (4%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLV 177
NK A+ITGITGQDG+YLA+LLLE GY V+G RR+SS N R++ + H PKL L
Sbjct: 2 NKVALITGITGQDGSYLAELLLEKGYEVHGIKRRASSFNTERVDHIYQDSHLANPKLFLH 61
Query: 178 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
DLTD S+ R+L+ P EVYNL A S V VSF+ P T D+ +G + LLEAIRI+
Sbjct: 62 YGDLTDTSNLTRILKEVQPDEVYNLGAMSHVAVSFESPEYTADVDAIGTLRLLEAIRILG 121
Query: 358 --PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 531
K +FYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYG+FA +
Sbjct: 122 LEKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMFACN 181
Query: 532 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
GILFNHESP R FVTRKIT IA I G L LGN+D+ RDWG AK+YV W ML
Sbjct: 182 GILFNHESPRRGETFVTRKITRGIANIAQGLDKCLYLGNMDSLRDWGHAKDYVKMQWMML 241
Query: 712 QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------SG 861
Q + P+ FV+AT +VR+FV++AA V I+L ++G+ E GV V+ G
Sbjct: 242 QQETPEDFVIATGIQYSVREFVTMAAEQVGIELAFEGEGVNEKGVVVSVNGTDAKAVNPG 301
Query: 862 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
+++++P+++RPAEV+ L+G+P A KLGW P+ TL E+ M+ +D+ ++++
Sbjct: 302 DVIISVDPRYFRPAEVETLLGDPTNAHKKLGWSPEITLREMVKEMVSSDLAIAKKN 357
>gi|4504031|ref|NP_001491.1|| GDP-mannose 4,6-dehydratase; GDPMD
>gi|3005057 (AF042377) GDP-mannose 4,6 dehydratase; GDPMD
[Homo sapiens]
Length = 372
Score = 352 bits (893), Expect = 3e-96
Identities = 178/332 (53%), Positives = 238/332 (71%), Gaps = 9/332 (2%)
Frame = +1
Query: 16 AVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHL-----VE 180
A+ITGITGQDG+YLA+ LLE GY V+G RRSSS N RI L ++P+ H+ +
Sbjct: 26 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHL--YKNPQAHIEGNMKLH 83
Query: 181 Y-DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR--- 348
Y DLTD + V+++ P E+YNL AQS V +SFD T D+ GVG + LL+A++
Sbjct: 84 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 143
Query: 349 IVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
++N ++FYQASTSE++GKVQ+ PQ E TPFYPRSPYG AKLYA+W+ VN+RE+Y +FA
Sbjct: 144 LIN-SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 202
Query: 529 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
+GILFNHESP R +FVTRKI+ ++A I LG+L+ LGNLDAKRDWG AK+YV+ MW M
Sbjct: 203 NGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM 262
Query: 709 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 888
LQ DEP+ FV+AT +VR+FV + + + W+G+ E E G +GK VT++ K
Sbjct: 263 LQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLK 322
Query: 889 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 1011
+YRP EVD L G+ KA+ KL W+P+ +EL M+ ADV
Sbjct: 323 YYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV 363
>gi|2506907|sp|P32054|GM4D_ECOLI GDP-MANNOSE 4,6-DEHYDRATASE
(GDP-D-MANNOSE DEHYDRATASE) >gi|1407612 (U38473)
GDP-D-mannose dehydratase [Escherichia coli]
>gi|1736759|dbj|BAA15909| (D90843) dTDP-glucose
4,6-dehydratase (EC 4.2.1.46). [Escherichia coli]
>gi|1788366 (AE000295) GDP-D-mannose dehydratase
[Escherichia coli]
Length = 373
Score = 349 bits (887), Expect = 2e-95
Identities = 178/340 (52%), Positives = 238/340 (69%), Gaps = 15/340 (4%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLV 177
+K A+ITG+TGQDG+YLA+ LLE GY V+G RR+SS N R++ + H PK HL
Sbjct: 2 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 61
Query: 178 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
DL+D S+ R+L P EVYNL A S V VSF+ P T D+ +G + LLEAIR +
Sbjct: 62 YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 121
Query: 358 --PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 531
K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYG++A +
Sbjct: 122 LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACN 181
Query: 532 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
GILFNHESP R FVTRKIT AIA I G L LGN+D+ RDWG AK+YV W ML
Sbjct: 182 GILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 241
Query: 712 QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV----------DVASG 861
Q ++P+ FV+AT +VR FV +AA+ + I+L ++G E G+ V G
Sbjct: 242 QQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPG 301
Query: 862 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 1026
++ ++P+++RPAEV+ L+G+P KA KLGW+P+ TL E+ M+ D+ +++
Sbjct: 302 DVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKK 356
>gi|6573398|pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase
Length = 372
Score = 349 bits (887), Expect = 2e-95
Identities = 178/340 (52%), Positives = 238/340 (69%), Gaps = 15/340 (4%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLV 177
+K A+ITG+TGQDG+YLA+ LLE GY V+G RR+SS N R++ + H PK HL
Sbjct: 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60
Query: 178 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
DL+D S+ R+L P EVYNL A S V VSF+ P T D+ +G + LLEAIR +
Sbjct: 61 YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 120
Query: 358 --PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 531
K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYG++A +
Sbjct: 121 LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACN 180
Query: 532 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
GILFNHESP R FVTRKIT AIA I G L LGN+D+ RDWG AK+YV W ML
Sbjct: 181 GILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240
Query: 712 QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV----------DVASG 861
Q ++P+ FV+AT +VR FV +AA+ + I+L ++G E G+ V G
Sbjct: 241 QQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPG 300
Query: 862 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 1026
++ ++P+++RPAEV+ L+G+P KA KLGW+P+ TL E+ M+ D+ +++
Sbjct: 301 DVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKK 355
>gi|5478239|gb|AAD43839.1|AF076290_9 (AF076290) putative GDP-D-mannose
dehydratase [Brucella melitensis]
Length = 356
Score = 349 bits (885), Expect = 3e-95
Identities = 178/343 (51%), Positives = 237/343 (68%), Gaps = 5/343 (1%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLH 171
M +K+A+I G+TGQDGAYL++LLL GY V+G RRSSS N RI+ L H +
Sbjct: 1 MQDKTALIVGVTGQDGAYLSELLLGKGYRVHGLKRRSSSFNTARIDHLYQDPHEEDIRFR 60
Query: 172 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
L DLTD ++ R+++ P E+YNL AQS V VSF+ P T + +G + LLE++RI
Sbjct: 61 LHFGDLTDATNLCRVIQEVQPDEIYNLGAQSHVQVSFETPEYTANADALGTLRLLESMRI 120
Query: 352 VN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFA 525
+ RFYQASTSE+FG Q E+TPF PRSPY AKLYA+W TVNYR++YG A
Sbjct: 121 LGLGKSCRFYQASTSELFGNSSHHAQNEQTPFAPRSPYATAKLYAYWTTVNYRDAYGFHA 180
Query: 526 ASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 705
++GILFNHESPLR FVTRKIT A+A I+ G D L+LGNL+A+RDWG A++YV+GMWR
Sbjct: 181 SNGILFNHESPLRGETFVTRKITRAVAAIERGLQDRLRLGNLEARRDWGHARDYVEGMWR 240
Query: 706 MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 885
+LQ D PD +VLAT T TVR+F+ A AVD Q+ W G E G+D +G L+ I+P
Sbjct: 241 ILQEDTPDDYVLATGETHTVREFIEHAFKAVDKQIVWHGDGVDELGIDRKTGNCLIEIDP 300
Query: 886 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
+++RP EVD L+G+ +KA+ +LGW+ T E L M++ D+R R+
Sbjct: 301 RYFRPNEVDFLMGDASKAKDRLGWQHTTGFENLVAEMVDWDLRNIMRE 348
>gi|3435177 (AF061251) GDP-D-mannose dehydratase Gmd [Escherichia
coli] >gi|4867921|dbj|BAA77730.1| (AB008676) GDP-mannose
4,6-dehydratase [Escherichia coli]
Length = 372
Score = 349 bits (885), Expect = 3e-95
Identities = 179/339 (52%), Positives = 237/339 (69%), Gaps = 15/339 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVE 180
K A+ITG+TGQDG+YLA+ LL+ GY V+G RR+SS N RI+ + H P HL
Sbjct: 3 KVALITGVTGQDGSYLAEFLLDKGYEVHGIKRRASSFNTERIDHIYQDPHGSNPNFHLHY 62
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN- 357
DLTD S+ R+L+ P EVYNLAA S V VSF+ P T D+ +G + LLEAIR +
Sbjct: 63 GDLTDSSNLTRILKEVQPDEVYNLAAMSHVAVSFESPEYTADVDAIGTLRLLEAIRFLGL 122
Query: 358 -PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 534
K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYGI+A +G
Sbjct: 123 ENKTRFYQASTSELYGLVQEIPQKESTPFYPRSPYAVAKLYAYWITVNYRESYGIYACNG 182
Query: 535 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 714
ILFNHESP R FVTRKIT +A I G L LGN+D+ RDWG AK+YV W MLQ
Sbjct: 183 ILFNHESPRRGETFVTRKITRGLANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQWLMLQ 242
Query: 715 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV----------DVASGK 864
++P+ FV+AT +VR FV +AA+ + I++ + G+ E G+ V G
Sbjct: 243 QEQPEDFVIATGVQYSVRQFVEMAAAQLGIKMSFVGKGIEEKGIVDSVEGQDAPGVKPGD 302
Query: 865 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 1026
+V ++P+++RPAEVD L+G+P+KA KLGW P+ TL E+ M+ D+ +++
Sbjct: 303 VIVAVDPRYFRPAEVDTLLGDPSKANLKLGWRPEITLAEMISEMVAKDLEAAKK 356
>gi|5824413|emb|CAA92455.2| (Z68215) similar to GDP-D-mannose
dehydratase; cDNA EST EMBL:C11174 comes from this gene;
cDNA EST yk561a7.3 comes from this gene [Caenorhabditis
elegans]
Length = 368
Score = 347 bits (882), Expect = 6e-95
Identities = 177/334 (52%), Positives = 234/334 (69%), Gaps = 7/334 (2%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL---GIAQH--PKLHL 174
K A+ITGI+GQDG+YLA+LLL GY V+G RRSSS N RI L I H L
Sbjct: 20 KVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSL 79
Query: 175 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI- 351
D+TD S ++L+ P EVY+LAAQS V VSFD P T ++ VG + LL+AI
Sbjct: 80 HYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHAC 139
Query: 352 -VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
+ K+RFYQASTSE++GKVQ+ PQ E+TPFYPRSPY +AK+Y +W+ VNYRE+Y +FA
Sbjct: 140 RLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREAYNMFAC 199
Query: 529 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
+GILFNHESP R FVTRKIT ++A I LG+ + ++LGNL A RDWG A+EYV+ MWR+
Sbjct: 200 NGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRI 259
Query: 709 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 888
LQ D PD FV+AT + +VR+F +LA + + L+W+G+ E G + G V ++PK
Sbjct: 260 LQHDSPDDFVIATGKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKN-KDGVIRVKVSPK 318
Query: 889 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 1011
+YRP EV+ L+GN KA+ LGWE K T+ EL M+ +D+
Sbjct: 319 YYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDI 359
>gi|1131462|gb|AAC96486.1| (U42580) similar to Yersinia GDP-D-mannose
dehydratase, corresponds to GenBank Accession Number
U46859 [Paramecium bursaria Chlorella virus 1]
Length = 345
Score = 346 bits (879), Expect = 1e-94
Identities = 174/336 (51%), Positives = 233/336 (68%), Gaps = 8/336 (2%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 180
M +K A++TG TGQDG YL L++ GY VYG R +SS N R+ EL + + +V
Sbjct: 1 MLSKVALVTGATGQDGTYLCPFLVKKGYTVYGLVRHTSSENP-RVEEL---KSQGVEIVH 56
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
DLTD +S + ++ P E+YN+AAQSFVG SF Q T ++ +G + LL+A+RI
Sbjct: 57 GDLTDSASLINIITKIRPDEIYNMAAQSFVGDSFHQAEVTANVDALGVLRLLDAVRIAGL 116
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
R QASTSE++GKVQ+ PQ E TPFYPRSPYG+AKLYA+W+ NYRESYG+F + I
Sbjct: 117 NSRICQASTSELYGKVQEIPQTERTPFYPRSPYGVAKLYAYWICKNYRESYGMFVCNSIC 176
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FNHESP R FVTRKIT A+A I G + LGN+D+KRDWG+A++Y++ MW MLQ D
Sbjct: 177 FNHESPNRGHQFVTRKITKAVANIFNGVEKCMYLGNIDSKRDWGYAEDYIEAMWLMLQQD 236
Query: 721 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVAS--------GKTLVT 876
PD +V+AT +T +VR+FV +A +DI +E+ G+ E E V+S G ++
Sbjct: 237 TPDDYVIATGQTTSVREFVKIAFGVLDIVVEFSGENENEIAYVVSSPEASHVKVGDVVMR 296
Query: 877 INPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEAD 1008
+N FYRPAEVDLL+G+ KA++ LGWEPKTTL EL MM+ +D
Sbjct: 297 VNKDFYRPAEVDLLVGDATKAKSVLGWEPKTTLNELVKMMVISD 340
>gi|1651657|dbj|BAA16585| (D90899) GDP-D-mannose dehydratase
[Synechocystis sp.]
Length = 362
Score = 343 bits (871), Expect = 1e-93
Identities = 180/335 (53%), Positives = 227/335 (67%), Gaps = 7/335 (2%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLV 177
+K ++TGITGQDG+YL++LLLE GY V+G RR+S+ N RI+ L + H KL L
Sbjct: 4 SKVVLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRLH 63
Query: 178 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
DLTD ++ R+LE P E+YNL AQS V VSFD P T D +G + LLEAIR
Sbjct: 64 YGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAIRDYQ 123
Query: 358 PK----IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFA 525
+ +RFYQA +SEMFGKVQ+ PQ E TPFYPRSPY AK+Y HW TVNYRESY +FA
Sbjct: 124 HRTGIQVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYGHWQTVNYRESYDLFA 183
Query: 526 ASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 705
+GILFNHESP R FVTRKIT AIA I G L LGN+D+KRDWG+AK+YV MW
Sbjct: 184 CNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNIDSKRDWGYAKDYVRAMWA 243
Query: 706 MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 885
MLQ ++PD +V+AT T V++F+ +A V+ L W + V +
Sbjct: 244 MLQQEQPDDYVVATGETHEVKEFLEIAFGYVN--LNW---------------QNYVAFDE 286
Query: 886 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 1011
++ RPAEVDLLIG+PAK + +LGWEP T EL H+M+EAD+
Sbjct: 287 RYLRPAEVDLLIGDPAKTKAQLGWEPSVTFTELVHLMVEADL 328
>gi|4097914 (U72147) putative GDP-D-mannose dehydratase [Anabaena sp.
CA]
Length = 359
Score = 342 bits (869), Expect = 2e-93
Identities = 181/336 (53%), Positives = 229/336 (67%), Gaps = 7/336 (2%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLV 177
+K A+ITGITGQDG+YL++ LL GY V+G RR+S+ N RI+ + H +L L
Sbjct: 4 HKRALITGITGQDGSYLSEFLLGQGYEVHGIIRRTSTFNTDRIDHIYEDPHKEGVRLFLH 63
Query: 178 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
DLTD ++ R+LE P E+YNL AQS V VSFD P T D G+G + LLEAIR
Sbjct: 64 YGDLTDGTTLRRILEEVQPTEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDYQ 123
Query: 358 PK----IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFA 525
+ +RFYQA +SEM+G VQ PQ E TPFYPRSPY AK+YAHW TVNYRESYG+FA
Sbjct: 124 HRTGIQVRFYQAGSSEMYGLVQAVPQSETTPFYPRSPYACAKVYAHWQTVNYRESYGLFA 183
Query: 526 ASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 705
+GILFNHESP R FVTRKIT A+A I GK L +GNLDAKRDWG+AK+YV MW
Sbjct: 184 CNGILFNHESPRRGETFVTRKITRAVARIVAGKQKTLYMGNLDAKRDWGYAKDYVRAMWL 243
Query: 706 MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 885
MLQ D+PD +V+AT T +VR+F+ LA S V+ L+W+ E +
Sbjct: 244 MLQQDQPDDYVIATGETHSVREFLELAFSHVN--LDWQDYVE---------------FDE 286
Query: 886 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVR 1014
++ RPAEVDLLIG+ KA+ KLGW P T +EL +M++AD++
Sbjct: 287 RYLRPAEVDLLIGDSTKAQQKLGWRPSVTFKELVALMVDADLQ 329
>gi|2738478 (AF004385) RfbDO22-1 [Vibrio cholerae]
>gi|3721676|dbj|BAA33626.1| (AB012957) probable O-antigen
synthesis oxidoreductase [Vibrio cholerae]
Length = 372
Score = 341 bits (866), Expect = 5e-93
Identities = 175/339 (51%), Positives = 239/339 (69%), Gaps = 17/339 (5%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY-- 183
K A+ITG+TGQDG+YLA+ LL GY V+G RR+SS N R++ I Q P + +
Sbjct: 3 KKALITGVTGQDGSYLAEFLLAKGYEVHGIKRRASSFNTQRVDH--IYQDPHVDNASFIL 60
Query: 184 ---DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 354
DLTD S+ R+L+ P EVYNL AQS V VSF+ P T D+ +G + LLEAIR++
Sbjct: 61 HYGDLTDSSNLTRILQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRLL 120
Query: 355 NPK--IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
+ +FYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+ VNYRESYG++A
Sbjct: 121 GLEKTTKFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKMYAYWIVVNYRESYGMYAC 180
Query: 529 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
+GILFNHESP R FVTRKIT +A I G L +GN+DA RDWG AK+YV W M
Sbjct: 181 NGILFNHESPRRGETFVTRKITRGLANIAQGLEKCLYMGNMDALRDWGHAKDYVRMQWMM 240
Query: 709 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------S 858
LQ D+P+ FV+AT +VR F+ +A + + L ++GQ E G+ A
Sbjct: 241 LQQDQPEDFVIATGVQYSVRQFIEWSAKELGVTLTFEGQGVDEKGIVSAIEGDKAPALKV 300
Query: 859 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 1026
G +V I+P+++RPAEV+ L+G+P+KA+ KLGW P+ T++E+C MM D++ ++R
Sbjct: 301 GDVVVQIDPRYFRPAEVETLLGDPSKAKQKLGWTPEITVQEMCAEMMMEDLKVAQR 356
>gi|6016140|sp|Q56598|GM4D_VIBCH PROBABLE GDP-MANNOSE 4,6-DEHYDRATASE
(GDP-D-MANNOSE DEHYDRATASE) >gi|2244681|emb|CAA69111|
(Y07786) oxidoreductase [Vibrio cholerae]
>gi|3724306|dbj|BAA33595.1| (AB012956) probable
GDP-D-mannose dehydratase [Vibrio cholerae]
Length = 372
Score = 340 bits (864), Expect = 8e-93
Identities = 174/339 (51%), Positives = 239/339 (70%), Gaps = 17/339 (5%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY-- 183
K A+ITG+TGQDG+YLA+ LL GY V+G RR+SS N R++ I Q P + +
Sbjct: 3 KKALITGVTGQDGSYLAEFLLAKGYEVHGIKRRASSFNTQRVDH--IYQDPHVDNASFIL 60
Query: 184 ---DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 354
DLTD S+ R+L+ P EVYNL AQS V VSF+ P T D+ +G + LLEAIR++
Sbjct: 61 HYGDLTDSSNLTRILQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRLL 120
Query: 355 NPK--IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
+ +FYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+ VNYRESYG++A
Sbjct: 121 GLEKTTKFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKMYAYWIVVNYRESYGMYAC 180
Query: 529 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
+GILFNHESP R FVTRKIT +A I G L +GN+DA RDWG AK+YV W M
Sbjct: 181 NGILFNHESPRRGETFVTRKITRGLANIAQGLEKCLYMGNMDALRDWGHAKDYVRMQWMM 240
Query: 709 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------S 858
LQ D+P+ FV+AT +VR F+ +A + + L ++GQ E G+ A
Sbjct: 241 LQQDQPEDFVIATGVQYSVRQFIEWSAKELGVTLTFEGQGVDEKGIVTAIEGDKAPALKV 300
Query: 859 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 1026
G +V I+P+++RPAEV+ L+G+P+KA+ KLGW P+ T++E+C M+ D++ ++R
Sbjct: 301 GDVVVQIDPRYFRPAEVETLLGDPSKAKQKLGWTPEITVQEMCAEMVMEDLKVAQR 356
>gi|2621389 (AE000818) GDP-D-mannose dehydratase [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 337 bits (856), Expect = 7e-92
Identities = 180/339 (53%), Positives = 227/339 (66%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
KSA+ITGITGQDGAYLA+ LLE GY VYG YRR S+ NFWR+ L I +++LV DL
Sbjct: 2 KSALITGITGQDGAYLAKFLLEKGYEVYGIYRRLSTPNFWRLQYLEIFD--RINLVPADL 59
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
TD S + L+++ EVY+LAAQSFVG SF+QP +T +TGV ++LEAIR NP IR
Sbjct: 60 TDEFSLLESLKISDADEVYHLAAQSFVGTSFEQPTSTAHVTGVAVTSMLEAIRHYNPHIR 119
Query: 370 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 549
FYQAS+SE++G T E +PF P SPY AKLY +WMT YRE Y IFA +GILFNH
Sbjct: 120 FYQASSSEIYGDGHTTILNENSPFKPSSPYAAAKLYGYWMTRIYREGYDIFACNGILFNH 179
Query: 550 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 729
ESPLR +FVTRKI++ A I LG D L LGNLDAKRDWG+A +YV+ M MLQ EPD
Sbjct: 180 ESPLRGLEFVTRKISNTAAKIALGLEDELLLGNLDAKRDWGYAPDYVEAMHMMLQHKEPD 239
Query: 730 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 909
FV+AT T TVR+F S ++ L+W + V ++ +F+RP +V
Sbjct: 240 DFVIATAETHTVREFCE--KSFEELGLDW---------------QDYVKVDKRFFRPLDV 282
Query: 910 DLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 1026
+ L G+ +KAR LGW+PKT EEL +M+ D+ R ER
Sbjct: 283 NYLCGDYSKARENLGWQPKTKFEELVKIMVREDLERWER 321
>gi|1002384 (U24571) rfbD-like gene; putative GDP-D-mannose
dehydratase; similar to the GDP-D-mannose dehydratase
from E. coli, Swiss-Prot Accession Number P32054, and the
RfbD protein from Vibrio cholerae O1, PIR Accession
Number S28470 [Vibrio cholerae]
Length = 348
Score = 336 bits (853), Expect = 2e-91
Identities = 172/330 (52%), Positives = 233/330 (70%), Gaps = 17/330 (5%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY-- 183
K A+ITG+TGQDG+YLA+ LL GY V+G RR+SS N R++ I Q P + +
Sbjct: 3 KKALITGVTGQDGSYLAEFLLAKGYEVHGIKRRASSFNTQRVDH--IYQDPHVDNASFIL 60
Query: 184 ---DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 354
DLTD S+ R+L+ P EVYNL AQS V VSF+ P T D+ +G + LLEAIR++
Sbjct: 61 HYGDLTDSSNLTRILQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRLL 120
Query: 355 NPK--IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
+ +FYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+ VNYRESYG++A
Sbjct: 121 GLEKTTKFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKMYAYWIVVNYRESYGMYAC 180
Query: 529 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
+GILFNHESP R FVTRKIT +A I G L +GN+DA RDWG AK+YV W M
Sbjct: 181 NGILFNHESPRRGETFVTRKITRGLANIAQGLEKCLYMGNMDALRDWGHAKDYVRMQWMM 240
Query: 709 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------S 858
LQ D+P+ FV+AT +VR F+ +A + + L ++GQ E G+ A
Sbjct: 241 LQQDQPEDFVIATGVQYSVRQFIEWSAKELGVTLTFEGQGVDEKGIVTAIEGDKAPALKV 300
Query: 859 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMM 999
G +V I+P+++RPAEV+ L+G+P+KA+ KLGW P+ T++E+C M+
Sbjct: 301 GDVVVQIDPRYFRPAEVETLLGDPSKAKQKLGWTPEITVQEMCAEMV 347
>gi|3258631 (AF040260) GDP-D-mannose-4,6-dehydratase [Homo sapiens]
Length = 339
Score = 336 bits (853), Expect = 2e-91
Identities = 170/323 (52%), Positives = 229/323 (70%), Gaps = 9/323 (2%)
Frame = +1
Query: 43 DGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHL-----VEY-DLTDLSS 204
DG+YLA+ LLE GY V+G RRSSS N RI L ++P+ H+ + Y DLTD +
Sbjct: 2 DGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHL--YKNPQAHIEGNMKLHYGDLTDSTC 59
Query: 205 SVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR---IVNPKIRFY 375
V+++ P E+YNL AQS V +SFD T D+ GVG + LL+A++ ++N ++FY
Sbjct: 60 LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLIN-SVKFY 118
Query: 376 QASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHES 555
QASTSE++GKVQ+ PQ E TPFYPRSPYG AKLYA+W+ VN+RE+Y +FA +GILFNHES
Sbjct: 119 QASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHES 178
Query: 556 PLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPDTF 735
P R +FVTRKI+ ++A I LG+L+ LGNLDAKRDWG AK+YV+ MW MLQ DEP+ F
Sbjct: 179 PRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDF 238
Query: 736 VLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEVDL 915
V+AT +VR+FV + + + W+G+ E E G +GK VT++ K+YRP EVD
Sbjct: 239 VIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDF 298
Query: 916 LIGNPAKARTKLGWEPKTTLEELCHMMMEADV 1011
L G+ KA+ KL W+P+ +EL M+ ADV
Sbjct: 299 LQGDCTKAKQKLNWKPRVAFDELVREMVHADV 330
>gi|280159|pir||S28470 rfbD protein - Vibrio cholerae
>gi|48385|emb|CAA42136| (X59554) oxidoreductase?,has
homology to Salmonella typhimurium RfbB [Vibrio
cholerae] >gi|1586119|prf||2203285C rfbD gene [Vibrio
cholerae]
Length = 373
Score = 335 bits (851), Expect = 3e-91
Identities = 177/341 (51%), Positives = 235/341 (68%), Gaps = 17/341 (4%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP-----K 165
M K A+ITGITGQDG+YLA+ LLE GY V+G RRSS N R++ L H K
Sbjct: 1 MNKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFK 60
Query: 166 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
LH DLTD S+ R+L P EVYNL AQS V VSF P T D+ +G + LLEAI
Sbjct: 61 LHYG--DLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAI 118
Query: 346 RIVN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 519
R + K +FYQASTSE++G VQ+ PQ E TPFYPRSPY +AK+YA+W+T+NYRESYGI
Sbjct: 119 RFLGLTKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
Query: 520 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGM 699
+A +GILFNHESP R FVTRKIT +A I G L +GNLDA RDWG AK+YV
Sbjct: 179 YACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQ 238
Query: 700 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV----------D 849
W MLQ DEP FV+AT +VR+F+ ++A + I+LE+ G+ E V
Sbjct: 239 WMMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPA 298
Query: 850 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSE 1023
+ G +V ++P ++RPAEV+ L+G+P+ A+ +LGW P+ TL+++ M+ +D+ +++
Sbjct: 299 IKVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEITLQQMVSEMVASDLEQAQ 356
>gi|3550478|emb|CAA11575| (AJ223833) gsbA [Mycobacterium avium subsp.
paratuberculosis]
Length = 343
Score = 331 bits (839), Expect = 7e-90
Identities = 178/340 (52%), Positives = 224/340 (65%), Gaps = 3/340 (0%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 180
K A+ITGITGQDG+YLA+LLL GY V+G RR+S+ N RI+ L + H +L L
Sbjct: 2 KRALITGITGQDGSYLAELLLSKGYEVHGLVRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
DLTD + V LL P EVYNLAAQS V VSFD+P+ T D TG+G++ LLEA+R+
Sbjct: 62 ADLTDGTRLVTLLSSIDPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSIRLLEAVRLSRV 121
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
RFYQAS+SEMFG PQ E TPFYPRSPYG AK++++W T NYRE+YG+FA +GIL
Sbjct: 122 DCRFYQASSSEMFG-ASPPPQNESTPFYPRSPYGAAKVFSYWTTRNYREAYGLFAVNGIL 180
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FNHESP R FVTRKIT A+A I+ G + +GNLDA RDWG+A EYV+GMWRMLQA
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIRAGVQSEVYMGNLDAIRDWGYAPEYVEGMWRMLQAP 240
Query: 721 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 900
EPD +VLAT R TVR+F A V L+W+ V + ++ RP
Sbjct: 241 EPDDYVLATGRGYTVREFAQAAFDHVG--LDWQKH---------------VKFDDRYLRP 283
Query: 901 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
EVD L+G+ +A LGW+ EL +M++AD+ SE D
Sbjct: 284 TEVDSLVGDADRAAQSLGWKASVHTGELARIMVDADIAASECD 326
>gi|3550473|emb|CAA11571| (AJ223832) gsbA [Mycobacterium avium subsp.
silvaticum]
Length = 343
Score = 330 bits (837), Expect = 1e-89
Identities = 178/340 (52%), Positives = 224/340 (65%), Gaps = 3/340 (0%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 180
K A+ITGITGQDG+YLA+LLL GY V+G RR+S+ N RI+ L + H +L L
Sbjct: 2 KRALITGITGQDGSYLAELLLSKGYEVHGLVRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
DLTD + V LL P EVYNLAAQS V VSFD+P+ T D TG+G++ LLEA+R+
Sbjct: 62 ADLTDGTRLVTLLSSIDPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSIRLLEAVRLSRV 121
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
RFYQAS+SEMFG PQ E TPFYPRSPYG AK++++W T NYRE+YG+FA +GIL
Sbjct: 122 DCRFYQASSSEMFG-ASPPPQNESTPFYPRSPYGAAKVFSYWTTRNYREAYGLFAVNGIL 180
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FNHESP R FVTRKIT A+A I+ G + +GNLDA RDWG+A EYV+GMWRMLQA
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIRAGVQSEVYMGNLDAIRDWGYAPEYVEGMWRMLQAP 240
Query: 721 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 900
EPD +VLAT R TVR+F A V L+W+ + V + ++ RP
Sbjct: 241 EPDDYVLATGRGYTVREFAQAAFDHVG--LDWQKR---------------VKFDDRYLRP 283
Query: 901 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
EVD L+G+ KA LGW+ EL +M++AD+ E D
Sbjct: 284 TEVDSLVGDADKAAQSLGWKASVHTGELARIMVDADIAALECD 326
>gi|4416473|gb|AAD20373| (AF125999) GDP-D-mannose-dehydratase mdhtA
[Mycobacterium avium]
>gi|5524326|gb|AAD44219.1|AF143772_25 (AF143772) mdhtA
[Mycobacterium avium]
Length = 343
Score = 330 bits (836), Expect = 2e-89
Identities = 178/340 (52%), Positives = 223/340 (65%), Gaps = 3/340 (0%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 180
K A+ITGITGQDG+YLA+LLL GY V+G RR+S+ N RI+ L + H +L L
Sbjct: 2 KRALITGITGQDGSYLAELLLSKGYEVHGLVRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
DLTD + V LL P EVYNLAAQS V VSFD+P+ T D TG+G++ LLEA+R+
Sbjct: 62 ADLTDGTRLVTLLSSIDPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSIRLLEAVRLSRV 121
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
RFYQAS+SEMFG PQ E TPFYPRSPYG AK++++W T NYRE+YG+FA +GIL
Sbjct: 122 DCRFYQASSSEMFG-ASPPPQNESTPFYPRSPYGAAKVFSYWTTRNYREAYGLFAVNGIL 180
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FNHESP R FVTRKIT A+A I+ G + +GNLDA RDWG+A EYV+GMWRMLQA
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIRAGVQSEVYMGNLDAIRDWGYAPEYVEGMWRMLQAP 240
Query: 721 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 900
EPD +VLAT R TVR+F A V L+W+ V + ++ RP
Sbjct: 241 EPDDYVLATGRGYTVREFAQAAFDHVG--LDWQKH---------------VKFDDRYLRP 283
Query: 901 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
EVD L+G+ KA LGW+ EL +M++AD+ E D
Sbjct: 284 TEVDSLVGDADKAAQSLGWKASVHTGELARIMVDADIAALECD 326
>gi|1524258|emb|CAB02025| (Z79701) gmdA [Mycobacterium tuberculosis]
Length = 340
Score = 328 bits (831), Expect = 6e-89
Identities = 179/338 (52%), Positives = 220/338 (64%), Gaps = 3/338 (0%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 180
K A+ITGITGQDG+YLA+LLL GY V+G RR+S+ N RI+ L + H +L L
Sbjct: 2 KRALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
DL D + V LL P EVYNLAAQS V VSFD+P+ T D TG+G++ LLEA+R+
Sbjct: 62 GDLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRV 121
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
RFYQAS+SEMFG PQ E TPFYPRSPYG AK+Y++W T NYRE+YG+FA +GIL
Sbjct: 122 HCRFYQASSSEMFG-ASPPPQNELTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVNGIL 180
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FNHESP R FVTRKIT A+A IK G + +GNLDA RDWG+A EYV+GMWRMLQ D
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGMWRMLQTD 240
Query: 721 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 900
EPD FVLAT R TVR+F A L+W + V + ++ RP
Sbjct: 241 EPDDFVLATGRGFTVREFARAAFEHAG--LDW---------------QQYVKFDQRYLRP 283
Query: 901 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSE 1023
EVD LIG+ KA LGW +EL +M++AD+ E
Sbjct: 284 TEVDSLIGDATKAAELLGWRASVHTDELARIMVDADMAALE 324
>gi|1107926|emb|CAA62143| (X90547) GDP-D-mannose 4,6-dehydratase
[Vibrio cholerae]
Length = 362
Score = 327 bits (829), Expect = 1e-88
Identities = 168/322 (52%), Positives = 226/322 (70%), Gaps = 17/322 (5%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY-- 183
K A+ITG+TGQDG+YLA+ LL GY V+G RR+SS N R++ I Q P + +
Sbjct: 3 KKALITGVTGQDGSYLAEFLLAKGYEVHGIKRRASSFNTQRVDH--IYQDPHVDNASFIL 60
Query: 184 ---DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 354
DLTD S+ R+L+ P EVYNL AQS V VSF+ P T D+ +G + LLEAIR++
Sbjct: 61 HYGDLTDSSNLTRILQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRLL 120
Query: 355 NPK--IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
+ +FYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+ VNYRESYG++A
Sbjct: 121 GLEKTTKFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKMYAYWIVVNYRESYGMYAC 180
Query: 529 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
+GILFNHESP R FVTRKIT +A I G L +GN+DA RDWG AK+YV W M
Sbjct: 181 NGILFNHESPRRGETFVTRKITRGLANIAQGLEKCLYMGNMDALRDWGHAKDYVRMQWMM 240
Query: 709 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------S 858
Q D+P+ FV+AT +VR F+ +A + + L ++GQ E G+ A
Sbjct: 241 FQQDQPEDFVIATGVQYSVRQFIEWSAKELGVTLTFEGQGVDEKGIVTAIEGDKAPALKV 300
Query: 859 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTL 975
G +V I+P+++RPAEV+ L+G+P+KA+ KLGW P+ T+
Sbjct: 301 GDVVVQIDPRYFRPAEVETLLGDPSKAKQKLGWTPEITV 339
>gi|4154547 (AE001443) GDP-D-mannose dehydratase [Helicobacter pylori
J99]
Length = 381
Score = 322 bits (817), Expect = 3e-87
Identities = 172/343 (50%), Positives = 238/343 (69%), Gaps = 23/343 (6%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGI---AQHPKLH 171
M K A+ITG+TGQDG+YLA+ LL +GY V+G RRSSS+N RI+ L ++H +
Sbjct: 1 MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSEHKRRF 60
Query: 172 LVEY-DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
+ Y D+TD S+ + L+ P E+YNLAAQS V VSF+ P T + G+G + +LEA+R
Sbjct: 61 FLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMR 120
Query: 349 IVN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIF 522
I+ K RFYQASTSE++G+V +TPQ E TPF PRSPY +AK+YA ++T NYRE+Y +F
Sbjct: 121 ILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLF 180
Query: 523 AASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMW 702
A +GILFNHES +R FVTRKIT A + I D L LGNLDAKRDWG AK+YV M
Sbjct: 181 AVNGILFNHESRVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMH 240
Query: 703 RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV------------ 846
MLQA P +V+AT +T +VRDFV ++ + I LE++ +E G+
Sbjct: 241 LMLQAPTPQDYVIATGKTTSVRDFVKMSFEFIGIDLEFQNTGIKEIGLIKSVDEKRANAL 300
Query: 847 -----DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 1011
+ +GK +V I+ ++RP EVDLL+G+P A +LGW + L+EL M+E D+
Sbjct: 301 QLNLSHLKTGKIVVRIDEHYFRPTEVDLLLGDPTGAEKELGWVREYDLKELVKDMLEYDL 360
Query: 1012 RRSERD 1029
+ +++
Sbjct: 361 KECQKN 366
>gi|2313119|gb|AAD07112.1| (AE000526) GDP-D-mannose dehydratase (rfbD)
[Helicobacter pylori 26695]
Length = 381
Score = 320 bits (811), Expect = 1e-86
Identities = 171/343 (49%), Positives = 237/343 (68%), Gaps = 23/343 (6%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGI---AQHPKLH 171
M K A+ITG+TGQDG+YLA+ LL +GY V+G RRSSS+N RI+ L + H +
Sbjct: 1 MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSDHKRRF 60
Query: 172 LVEY-DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
+ Y D+TD S+ + L+ P E+YNLAAQS V VSF+ P T + G+G + +LEA+R
Sbjct: 61 FLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMR 120
Query: 349 IVN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIF 522
I+ K RFYQASTSE++G+V +TPQ E TPF PRSPY +AK+YA ++T NYRE+Y +F
Sbjct: 121 ILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLF 180
Query: 523 AASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMW 702
A +GILFNHES +R FVTRKIT A + I D L LGNLDAKRDWG AK+YV M
Sbjct: 181 AVNGILFNHESRVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMH 240
Query: 703 RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV------------ 846
MLQA P +V+AT +T +VRDFV ++ + I LE++ +E G+
Sbjct: 241 LMLQAPIPQDYVIATGKTTSVRDFVKMSFEFIGINLEFQNTGIKEIGLIKSVDEKRANAL 300
Query: 847 -----DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 1011
+ G+ +V I+ +++RP EVDLL+G+P KA +L W + L+EL M+E D+
Sbjct: 301 KLNLSHLKKGQIVVRIDERYFRPTEVDLLLGDPTKAEKELDWVREYDLKELVKDMLEYDL 360
Query: 1012 RRSERD 1029
+ +++
Sbjct: 361 KECQKN 366
>gi|6319186|gb|AAF07199.1|AF195140_1 (AF195140) GDP-D-mannose
4,6-dehydratase; GMD1 [Arabidopsis thaliana]
Length = 361
Score = 312 bits (792), Expect = 2e-84
Identities = 168/340 (49%), Positives = 224/340 (65%), Gaps = 10/340 (2%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP------KLH 171
K A++TGITGQDG+YL + LLE GY V+G RRSS+ N R+N + + H KLH
Sbjct: 17 KIALVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPHNVNKALMKLH 76
Query: 172 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
DL+D SS R L++ P EVYNLAAQS V VSF+ P T D+ GA+ LLEA+R
Sbjct: 77 YG--DLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 134
Query: 352 VN----PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 519
N I++YQA +SEMFG PQ E TPF+PRSPY +K AHW TVNYRE+YG+
Sbjct: 135 HNIDNGRAIKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGL 193
Query: 520 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGM 699
+A +GILFNHESP R +FVTRKIT A+ IK+G L LGN+ A RDWGFA +YV+ M
Sbjct: 194 YACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVEAM 253
Query: 700 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 879
W MLQ ++PD +V+AT + TV++F+ ++ V L WK E I
Sbjct: 254 WLMLQQEKPDDYVVATEESHTVKEFLDVSFGYVG--LNWKDHVE---------------I 296
Query: 880 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
+ +++RP EVD L G+ +KA+ LGW+PK E+L MM++ D+ ++R+
Sbjct: 297 DKRYFRPTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVDEDLELAKRE 346
>gi|1764100 (U81805) GDP-D-mannose-4,6-dehydratase [Arabidopsis
thaliana]
Length = 373
Score = 309 bits (783), Expect = 3e-83
Identities = 169/340 (49%), Positives = 221/340 (64%), Gaps = 10/340 (2%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP------KLH 171
K A+ITGITGQDG+YL + LL GY V+G RRSS+ N RIN + I H KLH
Sbjct: 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 88
Query: 172 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
DLTD SS R +++ P EVYNLAAQS V VSF+ P T D+ GA+ LLEA+R
Sbjct: 89 YA--DLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 146
Query: 352 ----VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 519
+++YQA +SEMFG PQ E TPF+PRSPY +K AHW TVNYRE+YG+
Sbjct: 147 HTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGL 205
Query: 520 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGM 699
FA +GILFNHESP R +FVTRKIT A+ IK+G L LGNL A RDWGFA +YV+ M
Sbjct: 206 FACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 265
Query: 700 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 879
W MLQ ++PD +V+AT TV +F+ ++ + L WK E I
Sbjct: 266 WLMLQQEKPDDYVVATEEGHTVEEFLDVSFGY--LGLNWKDYVE---------------I 308
Query: 880 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
+ +++RPAEVD L G+ +KA+ LGW+P+ E+L MM++ D+ ++R+
Sbjct: 309 DQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKRE 358
>gi|1073345|pir||C55239 cpsB 5'-region hypothetical protein 1 -
Escherichia coli (fragment)
Length = 324
Score = 303 bits (767), Expect = 2e-81
Identities = 151/290 (52%), Positives = 202/290 (69%), Gaps = 12/290 (4%)
Frame = +1
Query: 157 HPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLL 336
+PK HL DL+D S+ R+L P EVYNL A S V VSF+ P T D+ +G + LL
Sbjct: 6 NPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLL 65
Query: 337 EAIRIVN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRES 510
EAIR + K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRES
Sbjct: 66 EAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRES 125
Query: 511 YGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYV 690
YG++A +GILFNHESP R FVTRKIT AIA I G L LGN+D+ RDWG AK+YV
Sbjct: 126 YGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYV 185
Query: 691 DGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV-------- 846
W MLQ ++P+ FV+AT +VR FV +AA+ + I+L ++G E G+
Sbjct: 186 KMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHD 245
Query: 847 --DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRS 1020
V G ++ ++P+++RPAEV+ L+G+P KA KLGW+P+ TL E+ M+ D+ +
Sbjct: 246 APGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAA 305
Query: 1021 ER 1026
++
Sbjct: 306 KK 307
>gi|6562268|emb|CAB62638.1| (AL132980) GDP-D-mannose-4, 6-dehydratase
(MUR1) [Arabidopsis thaliana]
Length = 373
Score = 303 bits (767), Expect = 2e-81
Identities = 167/340 (49%), Positives = 219/340 (64%), Gaps = 10/340 (2%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP------KLH 171
K A+ITGITGQDG+YL + LL GY V+G RRSS+ N RIN + I H KLH
Sbjct: 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 88
Query: 172 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
DLTD SS R +++ P EVYNLAAQS V VSF+ P T D+ GA+ LLEA+R
Sbjct: 89 YA--DLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 146
Query: 352 ----VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 519
+++YQA +SEMFG PQ E TP + RSPY +K AHW TVNYRE+YG+
Sbjct: 147 HTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPIHLRSPYAASKCAAHWYTVNYREAYGL 205
Query: 520 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGM 699
FA +GILFNHESP R +FVTRKIT A+ IK+G L LGNL A RDWGFA +YV+ M
Sbjct: 206 FACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 265
Query: 700 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 879
W MLQ ++PD +V+AT TV +F+ ++ + L WK E I
Sbjct: 266 WLMLQQEKPDDYVVATEEGHTVEEFLDVSFGY--LGLNWKDYVE---------------I 308
Query: 880 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 1029
+ +++RPAEVD L G+ +KA+ LGW+P+ E+L MM++ D+ ++R+
Sbjct: 309 DQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKRE 358
>gi|1651998|dbj|BAA16924| (D90901) GDP-D-mannose dehydratase
[Synechocystis sp.]
Length = 320
Score = 260 bits (658), Expect = 1e-68
Identities = 140/332 (42%), Positives = 197/332 (59%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
K A+I+GI+GQDGAYLAQLL+E Y V+GT R + NF + LGI + K+ V L
Sbjct: 2 KIALISGISGQDGAYLAQLLIEKSYAVWGTSRDAQISNFRNLKILGIRESIKV--VSMAL 59
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
TD S ++++ P E+YNLA QS VG+SF+QP+ T + +G +NLLE +R ++ I+
Sbjct: 60 TDFRSVLQVVSQVNPDEIYNLAGQSSVGLSFEQPVETLESITIGTLNLLEVVRFLDKPIK 119
Query: 370 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 549
Y AS+SE FG + E T F PRSPY +AK A W NYRE+Y ++A SGILFNH
Sbjct: 120 LYSASSSECFGDTGNSAADENTAFRPRSPYAVAKSAAFWQVANYREAYNLYACSGILFNH 179
Query: 550 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 729
ESPLR FVT+KI I G + L LGN RDWG+A EYV+ M+ MLQ +PD
Sbjct: 180 ESPLRPERFVTQKIIATACRIAQGSQEKLYLGNTSISRDWGWAPEYVEAMYLMLQQAKPD 239
Query: 730 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 909
+V+AT + ++DFV + S+ + L W+ V I+ +RP ++
Sbjct: 240 DYVIATGASYLLQDFVEITFSS--LGLNWREH---------------VIIDQSLFRPTDL 282
Query: 910 DLLIGNPAKARTKLGWEPKTTLEELCHMMMEA 1005
+ NP KA+ +LGW+ + ++ MM+ A
Sbjct: 283 AMGKANPRKAQEQLGWKAEYKTPDVVKMMINA 314
>gi|4321414|gb|AAD15751.1| (AF049343) GDP-mannose dehydratase
[Escherichia coli]
Length = 199
Score = 221 bits (557), Expect = 8e-57
Identities = 108/178 (60%), Positives = 131/178 (72%), Gaps = 2/178 (1%)
Frame = +1
Query: 214 LLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN--PKIRFYQAST 387
+L+ P EVYNLAA S V VSF+ P T D+ +G + LLEAIR + K RFYQAST
Sbjct: 1 ILKEVQPDEVYNLAAMSHVAVSFESPEYTADVDAIGTLRLLEAIRFLGLENKTRFYQAST 60
Query: 388 SEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHESPLRA 567
SE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYGI+A +GILFNHESP R
Sbjct: 61 SELYGLVQEIPQKESTPFYPRSPYAVAKLYAYWITVNYRESYGIYACNGILFNHESPRRG 120
Query: 568 RDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPDTFVLAT 747
FVTRKIT +A I G L LGN+D+ RDWG AK+YV W MLQ ++P+ FV+AT
Sbjct: 121 ETFVTRKITRGLANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQWLMLQQEQPEDFVIAT 180
>gi|2909577|emb|CAA17306| (AL021926) gca [Mycobacterium tuberculosis]
Length = 318
Score = 95.6 bits (234), Expect = 6e-19
Identities = 83/330 (25%), Positives = 138/330 (41%), Gaps = 6/330 (1%)
Frame = +1
Query: 22 ITGITGQDGAYLAQLLLEMGYVVYGTYRRS----SSLNFWRINELGIAQHPKLHLVEYDL 189
ITG G G++LA++LL G+ VY TY R S L F + E D+
Sbjct: 5 ITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQF--------------NGAEVDI 50
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
TD S + P V++LAAQS+ VS+ +P+ T VG + EA+R V P +
Sbjct: 51 TDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAK 110
Query: 370 FYQASTSEMFGKV--QQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
A +S +G V + P E P PYG++K + Y +SYG+ +F
Sbjct: 111 IIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIF 170
Query: 544 NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 723
N P + D ++ + + + +++GNL KR ++ + ML E
Sbjct: 171 NCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKGE 230
Query: 724 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 903
S+A D+ + +R+ + ++P RP
Sbjct: 231 AGADYNVGG---------SIAYEMGDVLKQVIAACKRD--------DIVPEVDPALLRPT 273
Query: 904 EVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 1011
+ ++ G+ +K GW+ +E+C AD+
Sbjct: 274 DEKIIYGDCSKLAAITGWQ-----QEICLTQTIADM 304
>gi|3249547 (AF009955) oxidoreductase Rmd [Pseudomonas aeruginosa]
Length = 284
Score = 88.2 bits (215), Expect = 1e-16
Identities = 69/267 (25%), Positives = 126/267 (46%), Gaps = 4/267 (1%)
Frame = +1
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
YDL + SV L P V +LA Q++V +F P T I +G +NLL+A++
Sbjct: 18 YDLLE-PDSVGDLWPELPDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGF 76
Query: 361 KIRFYQASTSEMFGKVQQT--PQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 534
F S+ +++G+V + P EE +PR+PY ++KL A + + + + G
Sbjct: 77 SGTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVA 136
Query: 535 ILFNHESPLRARDFVTRKITHAIAMIKLG-KLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
FNH P + FV IA +K G + + L++G++D RD+ ++ + R+L
Sbjct: 137 RPFNHIGPGQKDSFVIASAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLL 196
Query: 712 QADEPD-TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 888
E + + + + + +R+ + L A ++LE + +P
Sbjct: 197 SHGEAGAVYNVCSGQEQKIRELIELLADIAQVELE-------------------IVQDPA 237
Query: 889 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
R AE + G+ A+ GW+P+ T+++
Sbjct: 238 RMRRAEQRRVRGSHARLHDTTGWKPEITIKQ 268
>gi|6458415|gb|AAF10287.1|AE001927_6 (AE001927) UDP-glucose
4-epimerase, putative [Deinococcus radiodurans]
Length = 344
Score = 81.9 bits (199), Expect = 8e-15
Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 6/320 (1%)
Frame = +1
Query: 22 ITGITGQDGAYLAQLLLEMGYVV--YGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTD 195
+TG G G++L + L+ GY V Y S + + +H ++ L D+ D
Sbjct: 21 VTGADGFIGSHLTEDLVRAGYRVRAMAIYNSQGSYGWLDTVPGEVMEHVEVQLG--DVRD 78
Query: 196 LSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFY 375
+ SVR L + + VY+LAA + S+ P + + G +N+LEA R + R
Sbjct: 79 -AGSVRAL-MRDVQTVYHLAALIAIPYSYVAPRSYVETNITGTLNVLEAARDLGTG-RVI 135
Query: 376 QASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHES 555
STSE++G + P E P +SPY K+ A + +Y S+G+ + FN
Sbjct: 136 HTSTSEVYGTARSVPIHESHPLQGQSPYSATKIGADKLAESYFLSFGLPVVTLRPFNTYG 195
Query: 556 PLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD-- 729
P R I I+ + G+ ++ KLG+L RD+ + + +R + P+
Sbjct: 196 P---RQSARAVIPTIISQLAAGRTEI-KLGDLRPTRDFNYVADTARA-FRAVGEAGPEVL 250
Query: 730 --TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 903
T + R +V D V L A + +E K + ER + P+ +
Sbjct: 251 GRTLNAGSGREISVGDTVKLIAQVMGKDVEVKQEDER--------------LRPE---GS 293
Query: 904 EVDLLIGNPAKARTKLGWEPKTTLEE 981
EV L+ + + +T GW+P+ TLEE
Sbjct: 294 EVMRLLADHRELQTLTGWQPQVTLEE 319
>gi|4234783|gb|AAD12951.1| (AF078135) unknown [Leptospira
borgpetersenii]
Length = 332
Score = 79.2 bits (192), Expect = 5e-14
Identities = 84/318 (26%), Positives = 141/318 (43%), Gaps = 4/318 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWR-INELGIAQHPKLHLVEYD 186
K ++TG G G++L + L+ +G+ V + +S N W ++ K + D
Sbjct: 2 KKILVTGADGFIGSHLTEALVRLGFEVKA-FVYYNSFNTWGWLDYCSSDVRGKFEIFTGD 60
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D + VR + V +LAA + S+ P T D G +N+L+A R +N
Sbjct: 61 VRD-PNGVRTA-MKGIDAVLHLAALIGIPYSYHSPDTYVDTNIKGTLNVLQAARDLNLS- 117
Query: 367 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 546
R STSE++G Q P EE P +SPY +K+ A + ++ S+ FN
Sbjct: 118 RVIHTSTSEVYGTAQFVPITEEHPLKGQSPYSASKIGADQLAYSFYSSFSTPVIIVRPFN 177
Query: 547 HESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 723
P + AR + IT ++ GK + +LG+ RD+ F + V+G L++ +
Sbjct: 178 TYGPRQSARAIIPTVITQLLS----GKTKI-QLGSTSPTRDFNFVTDTVNGFISALKSKQ 232
Query: 724 --PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYR 897
+ + +V D V L AS +D ++E R I P+
Sbjct: 233 GLGEVINIGNGFEISVGDTVKLIASILDKEVEIVSDVNR--------------IRPE--- 275
Query: 898 PAEVDLLIGNPAKARTKLGWEP 963
+EV+ L + KA+ GW+P
Sbjct: 276 KSEVERLWSSNQKAKDLFGWQP 297
>gi|4972096|emb|CAB43892.1| (AL078468) UDPglucose 4-epimerase-like
protein [Arabidopsis thaliana]
Length = 350
Score = 76.1 bits (184), Expect = 5e-13
Identities = 81/326 (24%), Positives = 145/326 (43%), Gaps = 15/326 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY 183
KS ++TG G G++ LLE GY VV Y SS+ + R+ +L +L +
Sbjct: 3 KSVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQV 62
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 363
DL D + ++ V + A VG S ++PL + VG V LLE + K
Sbjct: 63 DLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCK 122
Query: 364 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
+ +S++ ++G ++ P EE+P +PYG KL+ + + S + IL
Sbjct: 123 NLVF-SSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKI--ILL 179
Query: 544 NHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLDAK-RDWGFAKEYVD 693
+ +P+ A V + + + +G+ L + D K +D ++Y+
Sbjct: 180 RYFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIH 239
Query: 694 GMWRMLQADEPDTFVLATNRTETVR---DFVSLAASAVDIQLEWKGQAERECGVDVASGK 864
M D D + A + + ++ + +L LE E+ ASGK
Sbjct: 240 VM------DLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEK------ASGK 287
Query: 865 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
+ + RP + +++ + KA +L W+ K +EE+C
Sbjct: 288 KIPLVMAG-RRPGDAEVVYASTEKAERELNWKAKNGIEEMC 327
>gi|5814300|gb|AAD52168.1|AF144879_7 (AF144879) unknown [Leptospira
interrogans]
Length = 332
Score = 74.1 bits (179), Expect = 2e-12
Identities = 82/318 (25%), Positives = 140/318 (43%), Gaps = 4/318 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWR-INELGIAQHPKLHLVEYD 186
K ++TG G G++L + L+ G+ V + +S N W ++ K + D
Sbjct: 2 KKILVTGADGFIGSHLTEALVRSGFEVKA-FVYYNSFNTWGWLDYCSDDVRGKFEIFTGD 60
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D + VR + V +LAA + S+ P T D G +N+L+A R +N
Sbjct: 61 VRD-PNGVRTA-MKGTDAVLHLAALIGIPYSYHSPDTYIDTNIKGTLNVLQAARDLNLS- 117
Query: 367 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 546
+ STSE++G Q P EE P +SPY +K+ A + ++ S+ FN
Sbjct: 118 KVIHTSTSEVYGTAQFVPITEEHPLKGQSPYSASKIGADQLAYSFYSSFSTPVIIVRPFN 177
Query: 547 HESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 723
P + AR + IT ++ GK V +LG+ RD+ F + V+G L++ +
Sbjct: 178 TYGPRQSARAIIPTVITQLLS----GKTKV-QLGSTSPTRDFNFVTDTVNGFISALKSKQ 232
Query: 724 --PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYR 897
+ + +V D V L A+ + ++E + R I P+
Sbjct: 233 GFGEVINIGNGFEISVGDTVKLIANIIGKEIEIVSDSNR--------------IRPE--- 275
Query: 898 PAEVDLLIGNPAKARTKLGWEP 963
+EV+ L + KA+ L W+P
Sbjct: 276 KSEVERLWASNQKAKDLLNWQP 297
>gi|2650312 (AE001082) dTDP-glucose 4,6-dehydratase (rfbB)
[Archaeoglobus fulgidus]
Length = 332
Score = 72.6 bits (175), Expect = 5e-12
Identities = 48/192 (25%), Positives = 87/192 (45%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
+A+ + ++ D+ D L++ V N AA+S V S P + +G
Sbjct: 46 LAEDERYSFIKGDINDYELVSDLIKKV--DAVVNFAAESHVDRSISSPYAFIESNFLGVY 103
Query: 328 NLLEAIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRE 507
+LEA+R NP++R ST E++G +++ E+ P SPY +K A + + Y
Sbjct: 104 TILEAVRKCNPEVRLVHVSTDEVYGDIEKGSFTEKDGLMPSSPYSASKAAADMLVLGYAR 163
Query: 508 SYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEY 687
+Y + A+ N+ P + F + I I K+ L V G RDW + +++
Sbjct: 164 TYNLNASITRCTNNYGPYQ---FPEKLIPKTIIRAKM-NLSVPIYGTGMNVRDWIYVEDH 219
Query: 688 VDGMWRMLQADE 723
+W +++ E
Sbjct: 220 CRAVWEVMEKGE 231
>gi|1710104|sp|P55295|RFBB_XANCA DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1073090|pir||B49906 rfbB homolog - Xanthomonas
campestris pv. campestris >gi|398120 (L23941)
TDP-glucose oxireductase [Xanthomonas campestris]
Length = 351
Score = 71.8 bits (173), Expect = 9e-12
Identities = 73/269 (27%), Positives = 116/269 (42%), Gaps = 10/269 (3%)
Frame = +1
Query: 175 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR-- 348
V+ D+ D + RLL+ P V N AA+S V S + P VG + LLEA+R
Sbjct: 55 VKGDIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDY 114
Query: 349 ------IVNPKIRFYQASTSEMFGKVQQTPQI-EETPFYPRSPYGIAKLYAHWMTVNYRE 507
RF ST E++G + +T + E TP+ P SPY +K + + +
Sbjct: 115 WKALPDTRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHH 174
Query: 508 SYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEY 687
+YG+ + N+ P F + I IA G+ + G+ RDW F ++
Sbjct: 175 TYGLPVLTTNCSNNYGPYH---FPEKLIPLVIAKALAGE-PLPVYGDGKQVRDWLFVSDH 230
Query: 688 VDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGK 864
+ + +L + +T+ + N + V + +D RE G S
Sbjct: 231 CEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLD------QHRPREDGKPRESQI 284
Query: 865 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
VT P R +D +K + +LGWEP T E+
Sbjct: 285 AYVTDRPGHDRRYAID-----ASKLKDELGWEPAYTFEQ 318
>gi|3258173|dbj|BAA30856.1| (AP000007) 306aa long hypothetical
UDP-glucose 4-epimerase [Pyrococcus horikoshii]
Length = 306
Score = 70.6 bits (170), Expect = 2e-11
Identities = 83/327 (25%), Positives = 144/327 (43%), Gaps = 1/327 (0%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 180
M NK VITG G G++LA+ L + V+ +L RI + + +
Sbjct: 1 MKNKLIVITGGAGFIGSHLAEALKDENDVII-----IDNLYSGRIENIPEG----VKFIR 51
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
D+ D S ++ A V++ AAQ V S + P+ T ++ +G +N+L A+ +
Sbjct: 52 ADVRDYESIAEVISEA--DYVFHEAAQISVKESIEDPVFTEEVNVIGTINVLRALSQGDG 109
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
K+ F AS++ ++G+ ++ P E+T P SPYGI KL A Y+ YGI
Sbjct: 110 KLIF--ASSAAVYGEPKELPITEDTLTNPISPYGITKLAAEHYCRVYQSLYGIPVVILRY 167
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FN P ++ + IK L + G+ RD+ + K+ V+
Sbjct: 168 FNVYGPRQSSAYAGVISIFLERAIKGEPLII--FGDGKQTRDFIYVKDVVEA-------- 217
Query: 721 EPDTFVLATNRTETVRDF-VSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYR 897
++A R+ R F V+ ++L K +D+ S + + P R
Sbjct: 218 ---NILVAKKRSANGRIFNVATGKETTILELAMK-------IIDMTSSSSSILFYPP--R 265
Query: 898 PAEVDLLIGNPAKARTKLGWEPKTTLEE 981
P ++ + + + KLG++P+ +LEE
Sbjct: 266 PGDIRRSVAKIERIK-KLGFKPRYSLEE 292
>gi|5457737|emb|CAB49227.1| (AJ248284) UDP-glucose 4-epimerase
(galE-1) [Pyrococcus abyssi]
Length = 307
Score = 70.6 bits (170), Expect = 2e-11
Identities = 79/327 (24%), Positives = 146/327 (44%), Gaps = 4/327 (1%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 180
M NK V+TG G G+++A+ L E VV N + + + K +E
Sbjct: 1 MRNKLIVVTGGAGFIGSHIAEALKEENDVVVID-------NLYSGKPENVPEGVKF--IE 51
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
D+ D S ++ A V++ AAQ V S P+ T ++ +G +N+L A+ N
Sbjct: 52 ADVRDYESIAEIVSSA--DYVFHEAAQISVEESVKDPVFTEEVNVIGTINILRALSEGNG 109
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
K+ F AS++ ++G+ P E+ P P SPYG++K+ + + YG+
Sbjct: 110 KLIF--ASSAAVYGEPTSLPIREDHPLNPISPYGVSKVSGEHYCKVFYQLYGVPTVILRY 167
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FN P ++ + + L ++ G+ RD+ + K+ V+ +L A+
Sbjct: 168 FNVYGPRQSSAYA--GVISIFMERALRGEPLVIFGDGKQSRDFVYVKDVVEA--NILVAE 223
Query: 721 ----EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 888
E +TF + T R T+ + LA +++ ++ ++ P
Sbjct: 224 KRRAEGETFNVGTGRETTI---IELAMKIIELS---------------STSSQILFSKP- 264
Query: 889 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
RP ++ + + K + KLG++P+ +LEE
Sbjct: 265 --RPGDIRRSVADIEKIK-KLGFKPRYSLEE 292
>gi|1944159|dbj|BAA19633| (AB002668) dTDP-D-glucose-4,6-dehydratase
[Actinobacillus actinomycetemcomitans]
Length = 355
Score = 69.1 bits (166), Expect = 6e-11
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 18/323 (5%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELG-------IAQHPKL 168
K+ ++TG G G+ + + ++E + S +N ++ G + +P+
Sbjct: 3 KTILVTGGAGFIGSAVVRYIIEN--------TQDSVVNVDKLTYAGNLESLEAVKNNPRY 54
Query: 169 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
+ D+ D + R+ E P V +LAA+S V S D P T + VG LLEA R
Sbjct: 55 IFEQVDICDAKALARIFEQHQPDAVMHLAAESHVDRSIDGPATFIETNIVGTYILLEAAR 114
Query: 349 -----IVNPK---IRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVN 498
+++ K RF+ ST E++G + T + E TP+ P SPY +K + +
Sbjct: 115 AYWSSLIDEKKAGFRFHHISTDEVYGDLDGTNNLFTETTPYSPSSPYSASKASSDHLVRA 174
Query: 499 YRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFA 678
+ +Y + N+ P K+ I + L + GN RDW F
Sbjct: 175 WLRTYSLPTIVTNCSNNYGP----KVFPEKLIPLIILNALDGKPLPVYGNGQQIRDWLFV 230
Query: 679 KEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA 855
+++ +++++ + +T+ + + + D V + ++ + + V
Sbjct: 231 EDHARALYKVVTEGKIGETYNIGGHNEKANIDVVRTICALLE-------ELVPDKPAGVT 283
Query: 856 SGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
+ L+T RP + K +LGW+P+ T E
Sbjct: 284 KYEDLITYVKD--RPGHDVRYAIDATKISRELGWKPQETFE 322
>gi|4981021|gb|AAD35594.1|AE001727_6 (AE001727) UDP-glucose
4-epimerase, putative [Thermotoga maritima]
Length = 309
Score = 67.9 bits (163), Expect = 1e-10
Identities = 78/328 (23%), Positives = 132/328 (39%), Gaps = 9/328 (2%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
++TG G G+++ L+E GY V SS ++ L + E + D
Sbjct: 4 LVTGGAGFIGSHVVDKLIENGYGVIVVDNLSSG----KVENL----NRNALFYEQSIEDE 55
Query: 199 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 378
R+ L P+ V++LAAQ+ V +S +P +G++ LLE K +
Sbjct: 56 EMMERIFSLHRPEYVFHLAAQASVAISVREPARDAKTNIIGSLVLLEKSIKYGVKKFIFS 115
Query: 379 ASTSEMFG---KVQQTPQIEETPFYPRSPYGIAK----LYAHWMTVNYRESYGIFAASGI 537
++ ++G KV TP+ E +P SPYGIAK +Y + Y Y + + +
Sbjct: 116 STGGAIYGENVKVFPTPETEIP--HPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANV 173
Query: 538 LFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQA 717
+ P + + L +V G+ + RD+ + + V ++
Sbjct: 174 YGPRQDP-----YGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAMEK 228
Query: 718 DEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYR 897
+ + F + T R TV L E P +
Sbjct: 229 GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKE-----------------------PVYKP 265
Query: 898 PAEVDL--LIGNPAKARTKLGWEPKTTLEELCHMMME 1002
P + D+ I + KA+ KLGWEPK +LEE + +E
Sbjct: 266 PRKGDVRKSILDYTKAKEKLGWEPKVSLEEGLKLTVE 302
>gi|5739472|gb|AAD50494.1|AF172324_12 (AF172324) WbnF [Escherichia
coli]
Length = 334
Score = 67.5 bits (162), Expect = 2e-10
Identities = 63/230 (27%), Positives = 102/230 (43%), Gaps = 6/230 (2%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-FWRIN----ELGIAQHPKLHLVEY 183
++TG G G Y+++ LL G+ V G +LN ++ +N L + +H +
Sbjct: 4 LVTGAAGFIGFYVSKRLLAAGHQVVGI----DNLNDYYDVNLKQARLDLLKHDNFSFYKI 59
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 363
DL D L V NLAAQ+ V S + P D +G +N+LE R N +
Sbjct: 60 DLADREKMAALFADERFDRVINLAAQAGVRYSLENPNAYADANLIGFLNILEGCRHNNVQ 119
Query: 364 IRFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
Y AS+S ++G ++ P +++ +P S Y K M Y YG+
Sbjct: 120 HLLY-ASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPTTGLRF 178
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
F P D K T AM++ +DV G + KRD+ + + + + R+
Sbjct: 179 FTVYGPWGRPDMALFKFTK--AMLEGKSIDVYNFGKM--KRDFTYIDDIAEAIIRL 230
>gi|3135674 (AF064070) putative dTDP-D-glucose 4,6-dehydratase
[Burkholderia pseudomallei]
Length = 353
Score = 66.7 bits (160), Expect = 3e-10
Identities = 70/274 (25%), Positives = 107/274 (38%), Gaps = 11/274 (4%)
Frame = +1
Query: 157 HPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLL 336
+PK D+ D ++ LL P+ + + AA+S V S P VG LL
Sbjct: 48 NPKHVFARVDICDRAAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLL 107
Query: 337 EAIRI--------VNPKIRFYQASTSEMFGKVQQT-PQIEET-PFYPRSPYGIAKLYAHW 486
EA R RF ST E+FG + PQ ET P+ P SPY K +
Sbjct: 108 EAARQYWSALGPDAKAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDH 167
Query: 487 MTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRD 666
+ Y +YG+ + N+ P + K+ + LG + G+ RD
Sbjct: 168 LVRAYHHTYGLPVLTTNCSNNYGPYQ----FPEKLIPLMIANALGGKPLPVYGDGQNVRD 223
Query: 667 WGFAKEYVDGMWRMLQADEP-DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECG 843
W + ++ + +L P +T+ + + D V +D +A + G
Sbjct: 224 WLYVGDHCSAIREVLARGVPGETYNVGGWNEKKNLDVVHTLCDLLD-------EARPKAG 276
Query: 844 VDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
T VT P R +D K +LGW+P T E
Sbjct: 277 GSYRDQITYVTDRPGHDRRYAID-----ARKLERELGWKPAETFE 316
>gi|3132254|dbj|BAA28131| (AB010415) dTDP-D-glucose-4,6-dehydratase
[Actinobacillus actinomycetemcomitans]
Length = 355
Score = 66.7 bits (160), Expect = 3e-10
Identities = 77/323 (23%), Positives = 138/323 (41%), Gaps = 21/323 (6%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELG-------IAQHPKL 168
K+ ++TG G G+ + + ++E + S +N ++ G + +P+
Sbjct: 3 KTILVTGGAGFIGSAVVRYIIEN--------TQDSVVNVDKLTYAGNLESLETVKNNPRY 54
Query: 169 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
+ D+ D + R+ E P V +LAA+S V S D P + VG LLEA R
Sbjct: 55 IFEQVDICDAKALARIFEQHQPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYILLEAAR 114
Query: 349 IV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVN 498
RF+ ST E++G + T + E TP+ P SPY +K + +
Sbjct: 115 AYWSSLNDEKKAGFRFHHISTDEVYGDLDGTKNLFTETTPYSPSSPYSASKASSDHLVRA 174
Query: 499 YRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKL---GNLDAKRDW 669
+ +Y + N+ P + I +I L LD L GN RDW
Sbjct: 175 WLRTYSLPTIVTNCSNNYGPFHFPE-------KLIPLIILNALDGKPLPVYGNGQQIRDW 227
Query: 670 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 846
F +++ +++++ + +T+ + + + D V + ++ + K
Sbjct: 228 LFVEDHARALYKVVTEGKIGETYNIGGHNEKANIDVVRTICALLEELVPNK-------PA 280
Query: 847 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
V + L+T RP + K +LGW+P+ T E
Sbjct: 281 GVTKYEDLITYVKD--RPGHDVRYAIDATKISRELGWKPQETFE 322
>gi|5545317|dbj|BAA82532.1| (AB030032) dTDP-D-glucose
4,6-dehydratase [Actinobacillus actinomycetemcomitans]
Length = 355
Score = 66.7 bits (160), Expect = 3e-10
Identities = 77/323 (23%), Positives = 138/323 (41%), Gaps = 21/323 (6%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELG-------IAQHPKL 168
K+ ++TG G G+ + + ++E + S +N ++ G + +P+
Sbjct: 3 KTILVTGGAGFIGSAVVRYIIEN--------TQDSVVNVDKLTYAGNLESLEAVKNNPRY 54
Query: 169 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
+ D+ D + R+ + P V +LAA+S V S D P + VG LLEA R
Sbjct: 55 TFEQVDICDAKALARIFQQHRPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYILLEAAR 114
Query: 349 IV--------NPKIRFYQASTSEMFGKVQQTPQ--IEETPFYPRSPYGIAKLYAHWMTVN 498
RF+ ST E++G + T IE TP+ P SPY +K + +
Sbjct: 115 AYWNSLNDEKKAVFRFHHISTDEVYGDLDGTNNLFIETTPYSPSSPYSASKASSDHLVRA 174
Query: 499 YRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKL---GNLDAKRDW 669
+ +Y + N+ P + I +I L LD L GN RDW
Sbjct: 175 WLRTYSLPTIVTNCSNNYGPFHFPE-------KLIPLIILNALDGKPLPVYGNGQQIRDW 227
Query: 670 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 846
F +++ +++++ + +T+ + + + D V + ++ + K
Sbjct: 228 LFVEDHARALYKVVAEGKIGETYNIGGHNEKANIDVVRTICALLEELVPNK-------PA 280
Query: 847 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
V + L+T RP + K +LGW+P+ T E
Sbjct: 281 GVTKYEDLITYVKD--RPGHDVRYAIDATKISRELGWKPQETFE 322
>gi|5458599|emb|CAB50087.1| (AJ248286) dTDP-glucose 4,6-dehydratase
(rfbB) [Pyrococcus abyssi]
Length = 333
Score = 66.3 bits (159), Expect = 4e-10
Identities = 52/192 (27%), Positives = 83/192 (43%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
I P+ V+ D+ D L++ + + AA+S V S P +G
Sbjct: 47 IQDDPRYTFVKGDVADFELVRELIKKV--DAIVHFAAESHVDRSISSPDNFLHSNVIGTY 104
Query: 328 NLLEAIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRE 507
LLEAIR NP +R ST E++G + + EE P SPY K + + + +
Sbjct: 105 TLLEAIRKENPGVRLVHISTDEVYGDILKGSFTEEDRLMPSSPYSATKAASDMLVLGWAR 164
Query: 508 SYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEY 687
+YG+ A+ N+ P + F + I I K+G L V G RDW + +++
Sbjct: 165 TYGLNASITRCTNNYGPYQ---FPEKLIPKTIIRAKMG-LKVPIYGTGKNVRDWLYVEDH 220
Query: 688 VDGMWRMLQADE 723
V + +L E
Sbjct: 221 VRAIEAVLLKGE 232
>gi|2129578|pir||S58282 dTDP-glucose 4-6-dehydratases homolog -
Arabidopsis thaliana >gi|928932|emb|CAA89205| (Z49239)
homolog of dTDP-glucose 4-6-dehydratases [Arabidopsis
thaliana] >gi|1585435|prf||2124427B diamide resistance
gene [Arabidopsis thaliana]
Length = 445
Score = 65.6 bits (157), Expect = 7e-10
Identities = 81/328 (24%), Positives = 140/328 (41%), Gaps = 11/328 (3%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVEYDL 189
V+TG G G++L L+ G V NF+ + + H P ++ +D+
Sbjct: 122 VVTGGAGFVGSHLVDRLMARGDTVIVVD------NFFTGRKENVMHHFSNPNFEMIRHDV 175
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQ-SFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ LLE+ ++Y+LA S V F+ P+ T VG +N+L + V
Sbjct: 176 VEPI----LLEV---DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA-- 225
Query: 367 RFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 531
RF STSE++G Q PQ+E P RS Y K A +T++Y +
Sbjct: 226 RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGSNVEVRI 285
Query: 532 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
+FN P D R +++ +A L K + G+ R + F + V+G+ R++
Sbjct: 286 ARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 343
Query: 712 QADEPDTFVLATNRTETVRDFVSLAASAVD--IQLEWKGQAERECGVDVASGKTLVTINP 885
+ + F L T+ + + +D +E++ E + P
Sbjct: 344 EGEHVGPFNLGNPGEFTMLELAKVVQETIDPNANIEFRPNTEDD---------------P 388
Query: 886 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMME 1002
+P + KA+ LGWEPK +L + +M++
Sbjct: 389 HKRKP--------DITKAKELLGWEPKVSLRQGLPLMVK 419
>gi|4679656|emb|CAB41308.1| (AL033517) GMDS (GDP-mannose
4,6-dehydratase) [Homo sapiens]
Length = 72
Score = 65.6 bits (157), Expect = 7e-10
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = +1
Query: 697 MWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVT 876
MW MLQ DEP+ FV+AT +VR+FV + + + W+G+ E E G +GK VT
Sbjct: 2 MWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT 61
Query: 877 INPKFYRPAEV 909
++ K+YRP EV
Sbjct: 62 VDLKYYRPTEV 72
>gi|6688597|emb|CAB65206.1| (AJ007311) RmlB protein [Legionella
pneumophila]
Length = 351
Score = 65.6 bits (157), Expect = 7e-10
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Frame = +1
Query: 163 KLHL-VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLE 339
K HL V+ D+ D S + LL + + AA+S V S D P + +G LLE
Sbjct: 73 KNHLFVQGDILDKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLE 132
Query: 340 AIRIV--------NPKIRFYQASTSEMFGKVQQTPQ--IEETPFYPRSPYGIAKLYAHWM 489
A RI K RF+ ST E++G +++ E+ + P SPY +K + +
Sbjct: 133 AARIYWLNERQWDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSPYSASKASSDHI 192
Query: 490 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 669
Y +YG+ + N+ P + ++ + K+ +A + +L + GN RDW
Sbjct: 193 VRAYYHTYGLPVTTSNCSNNYGPNQHKEKLIPKVVYAC----VNQLPITVYGNGSNIRDW 248
Query: 670 GFAKEYVDGMWRMLQ 714
+ ++ + + ++Q
Sbjct: 249 LYVMDHCEAIDTIIQ 263
>gi|1223961 (U29691) CDP-tyvelose epimerase [Yersinia
pseudotuberculosis]
Length = 338
Score = 65.2 bits (156), Expect = 9e-10
Identities = 56/188 (29%), Positives = 89/188 (46%), Gaps = 19/188 (10%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVY---GTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
+ITG G G+ LA ++ G V R SS N + +G + V D+
Sbjct: 4 LITGGCGFLGSNLASHAIKSGMEVIVFDNLSRYGSSDNLKWLQSIGGFTY-----VHGDI 58
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
+ + RL++ P +++LA Q + S D P ++ G NLLEAIR+ NP+
Sbjct: 59 RNRNDITRLIQKFKPDSIFHLAGQVAMTTSIDNPQMDFEVNVGGTFNLLEAIRLFNPECG 118
Query: 370 FYQASTSEMFGKVQQTPQIEETPFYP----------------RSPYGIAKLYAHWMTVNY 501
+ST++++G ++Q E Y SPYG +K A ++Y
Sbjct: 119 IIYSSTNKVYGDLEQFTYRETDTRYECIEMPDGFDESTQLTFHSPYGCSKGAADQYMLDY 178
Query: 502 RESYGIFAASGILFNHESPLRARDFVT 582
YG+ ++F H S R F T
Sbjct: 179 ARIYGL---KTVVFRHSSMYGGRQFST 202
>gi|729026|sp|P39858|CAPI_STAAU CAPI PROTEIN >gi|506705 (U10927)
CapI [Staphylococcus aureus]
Length = 334
Score = 65.2 bits (156), Expect = 9e-10
Identities = 70/232 (30%), Positives = 105/232 (45%), Gaps = 7/232 (3%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYR----RSSSLNFWRINELGIAQHP--KLHLVE 180
+ITG G G++LA+ L++ G+ V G S SL R+ +G K+ L
Sbjct: 4 LITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLEN 63
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
YD DLS ++ P+ V NLAAQ+ V S + P T D VG +N+LE R N
Sbjct: 64 YD--DLS---KVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNI 118
Query: 361 KIRFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 537
+ Y AS+S ++G P + +P S Y K M Y Y +
Sbjct: 119 QNLIY-ASSSSVYGANTSKPFSTSDNIDHPLSLYAATKKSNELMAHTYSHLYNLPTTGLR 177
Query: 538 LFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 714
F P D K T AI + +DV GN+ RD+ + + V+ + R+++
Sbjct: 178 FFTVYGPWGRPDMALFKFTKAI--VNDQAIDVYNHGNM--MRDFTYVDDIVEAISRLVK 232
>gi|4539370|emb|CAB40064.1| (AL049525) UDP-galactose
4-epimerase-like protein [Arabidopsis thaliana]
Length = 351
Score = 64.8 bits (155), Expect = 1e-09
Identities = 77/329 (23%), Positives = 146/329 (43%), Gaps = 16/329 (4%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHL 174
M ++ +++G G G++ LL GY VV SS+++ R+ +L +L
Sbjct: 1 MMARNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSF 60
Query: 175 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 354
+ DL D S+ ++ V + A VG S ++PL + VG + LLE +
Sbjct: 61 HQVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQH 120
Query: 355 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA-S 531
K + +S++ ++G ++ P EE P +PYG KL+ + R+ YG
Sbjct: 121 GCKNLVF-SSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEIC---RDVYGSDPEWK 176
Query: 532 GILFNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAK 681
IL + +P+ A + + + + +G+ L + GN +D +
Sbjct: 177 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVR 236
Query: 682 EYVDGMWRMLQADEPDTFVLATNRTETVR---DFVSLAASAVDIQLEWKGQAERECGVDV 852
+Y+ + D D + A + E + + +L LE E+
Sbjct: 237 DYIHVI------DLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEK------ 284
Query: 853 ASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
ASGK + + RP + +++ + +A ++L W+ K +EE+C
Sbjct: 285 ASGKKIPLVIAG-RRPGDAEVVYASTERAESELNWKAKYGIEEMC 328
>gi|3738279|gb|AAC63621.1| (AC005309) putative nucleotide-sugar
dehydratase [Arabidopsis thaliana]
Length = 443
Score = 64.4 bits (154), Expect = 1e-09
Identities = 81/328 (24%), Positives = 140/328 (41%), Gaps = 11/328 (3%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVEYDL 189
V+TG G G++L L+ G V NF+ + + H P ++ +D+
Sbjct: 124 VVTGGAGFVGSHLVDRLMARGDNVIVVD------NFFTGRKENVMHHFNNPNFEMIRHDV 177
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQ-SFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ LLE+ ++Y+LA S V F+ P+ T VG +N+L + V
Sbjct: 178 VEPI----LLEV---DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA-- 227
Query: 367 RFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 531
RF STSE++G Q PQ+E P RS Y K A +T++Y +
Sbjct: 228 RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRI 287
Query: 532 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
+FN P D R +++ +A L K + G+ R + F + V+G+ R++
Sbjct: 288 ARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 345
Query: 712 QADEPDTFVLATNRTETVRDFVSLAASAVD--IQLEWKGQAERECGVDVASGKTLVTINP 885
+ + F L T+ + + +D ++E++ E + P
Sbjct: 346 EGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDD---------------P 390
Query: 886 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMME 1002
+P + KA+ LGWEPK L + +M++
Sbjct: 391 HKRKP--------DITKAKELLGWEPKVALRQGLPLMVK 421
>gi|6522623|emb|CAB62035.1| (AL133298) dTDP-glucose
4-6-dehydratases-like protein [Arabidopsis thaliana]
Length = 341
Score = 64.0 bits (153), Expect = 2e-09
Identities = 83/332 (25%), Positives = 136/332 (40%), Gaps = 9/332 (2%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMG---YVVYGTYRRSSSLNFWRINELGIAQHPKLHLV 177
N +I+G G G++L L+E +V Y S N + HP+ L+
Sbjct: 28 NMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKW-----IGHPRFELI 82
Query: 178 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
+D+T+ L+E+ ++Y+LA + P+ T +G +N+L + V
Sbjct: 83 RHDVTE----PLLIEV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 135
Query: 358 PKIRFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIF 522
+I STSE++G PQ E P RS Y K A + +Y +GI
Sbjct: 136 ARILL--TSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 193
Query: 523 AASGILFNHESPLRARDFVTRKITHAIAMIKLGK-LDVLKLGNLDAKRDWGFAKEYVDGM 699
+FN P D R +++ IA G+ L V K G R + + + VDG+
Sbjct: 194 IRIARIFNTYGPRMNIDD-GRVVSNFIAQALRGEALTVQKPGT--QTRSFCYVSDMVDGL 250
Query: 700 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 879
R+++ D+ + T+ + ++ +E K +V
Sbjct: 251 MRLMEGDDTGPINIGNPGEFTMVELAETVKELINPSIEIK----------------MVEN 294
Query: 880 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMME 1002
P R + D+ KA+ LGWEPK L E +M E
Sbjct: 295 TPDDPRQRKPDI-----TKAKEVLGWEPKVKLREGLPLMEE 330
>gi|3513739 (AF080118) Similar to uridine diphosphate glucose
epimerase; F8M12.10 [Arabidopsis thaliana]
Length = 350
Score = 64.0 bits (153), Expect = 2e-09
Identities = 76/326 (23%), Positives = 145/326 (44%), Gaps = 16/326 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY 183
++ +++G G G++ LL GY VV SS+++ R+ +L +L +
Sbjct: 3 RNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQV 62
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 363
DL D S+ ++ V + A VG S ++PL + VG + LLE + K
Sbjct: 63 DLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCK 122
Query: 364 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA-SGIL 540
+ +S++ ++G ++ P EE P +PYG KL+ + R+ YG IL
Sbjct: 123 NLVF-SSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEIC---RDVYGSDPEWKIIL 178
Query: 541 FNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAKEYV 690
+ +P+ A + + + + +G+ L + GN +D ++Y+
Sbjct: 179 LRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYI 238
Query: 691 DGMWRMLQADEPDTFVLATNRTETVR---DFVSLAASAVDIQLEWKGQAERECGVDVASG 861
+ D D + A + E + + +L LE E+ ASG
Sbjct: 239 HVI------DLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEK------ASG 286
Query: 862 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
K + + RP + +++ + +A ++L W+ K +EE+C
Sbjct: 287 KKIPLVIAG-RRPGDAEVVYASTERAESELNWKAKYGIEEMC 327
>gi|585828|sp|P37761|RFBB_NEIGO DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|628590|pir||S47045 dTDP-D-glucose 4,6-dehydratase -
Neisseria gonorrhoeae >gi|520896|emb|CAA83652| (Z32742)
dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae]
>gi|1333793|emb|CAA79718| (Z21508) dTDP-D-glucose
4,6-dehydratase [Neisseria gonorrhoeae]
Length = 346
Score = 63.6 bits (152), Expect = 3e-09
Identities = 79/323 (24%), Positives = 140/323 (42%), Gaps = 18/323 (5%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELG-------IAQHPKL 168
K+ ++TG G G+ + + +++ T R S +N ++ G IA +P+
Sbjct: 7 KNILVTGGAGFIGSAVVR------HIIQNT--RDSVVNLDKLTYAGNLESLTDIADNPRY 58
Query: 169 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
+ D+ D + R+ P V +LAA+S V + VG +LLEA R
Sbjct: 59 AFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAAR 118
Query: 349 IV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVN 498
RF+ ST E++G + T + E TP+ P SPY +K A +
Sbjct: 119 AYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRA 178
Query: 499 YRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFA 678
++ +Y + I+ N + R F + I I GK + G+ RDW F
Sbjct: 179 WQRTYRL---PSIVSNCSNNYGPRQFPEKLIPLMILNALSGK-PLPVYGDGAQIRDWLFV 234
Query: 679 KEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA 855
+++ +++++ + +T+ + + +T + V + ++ + E VA
Sbjct: 235 EDHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLE-------ELAPEKPAGVA 287
Query: 856 SGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
+ L+T RP + AK R LGW P T E
Sbjct: 288 RYEDLITFVQD--RPGHDARYAVDAAKIRRDLGWLPLETFE 326
>gi|1350580|sp|P14169|RFBE_SALTI CDP-TYVELOSE-2-EPIMERASE >gi|861175
(M29682) CDP-tyvelose epimerase [Salmonella enterica]
Length = 338
Score = 62.8 bits (150), Expect = 4e-09
Identities = 55/188 (29%), Positives = 85/188 (44%), Gaps = 19/188 (10%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGY---VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
+ITG G G+ LA L G V R+ ++ N ++ LG V D+
Sbjct: 4 LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG-----NFEFVHGDI 58
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
+ + RL+ P ++LA Q + S D P +I G +NLLEA+R N
Sbjct: 59 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 118
Query: 370 FYQASTSEMFGKVQQTPQIEETPFYP----------------RSPYGIAKLYAHWMTVNY 501
+ST++++G ++Q E Y SPYG +K A ++Y
Sbjct: 119 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 178
Query: 502 RESYGIFAASGILFNHESPLRARDFVT 582
IF + ++F H S R F T
Sbjct: 179 AR---IFGLNTVVFRHSSMYGGRQFAT 202
>gi|96686|pir||B33604 rfbE protein - Salmonella sp
Length = 348
Score = 62.8 bits (150), Expect = 4e-09
Identities = 55/188 (29%), Positives = 85/188 (44%), Gaps = 19/188 (10%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGY---VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
+ITG G G+ LA L G V R+ ++ N ++ LG V D+
Sbjct: 4 LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG-----NFEFVHGDI 58
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
+ + RL+ P ++LA Q + S D P +I G +NLLEA+R N
Sbjct: 59 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 118
Query: 370 FYQASTSEMFGKVQQTPQIEETPFYP----------------RSPYGIAKLYAHWMTVNY 501
+ST++++G ++Q E Y SPYG +K A ++Y
Sbjct: 119 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 178
Query: 502 RESYGIFAASGILFNHESPLRARDFVT 582
IF + ++F H S R F T
Sbjct: 179 AR---IFGLNTVVFRHSSMYGGRQFAT 202
>gi|3256817|dbj|BAA29500| (AP000002) 336aa long hypothetical
dTDP-glucose 4,6-dehydratase [Pyrococcus horikoshii]
Length = 336
Score = 62.8 bits (150), Expect = 4e-09
Identities = 48/177 (27%), Positives = 77/177 (43%)
Frame = +1
Query: 160 PKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLE 339
P+ V+ D+ D L+ V +LAA+S V S P +G LLE
Sbjct: 54 PRYTFVKGDVADYELVKELVRKV--DGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLE 111
Query: 340 AIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 519
+IR NP++RF ST E++G + + E P SPY K + + + + +Y +
Sbjct: 112 SIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNL 171
Query: 520 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYV 690
A+ N+ P + F + I I LG L + G RDW + +++V
Sbjct: 172 NASITRCTNNYGPYQ---FPEKLIPKTIIRASLG-LKIPIYGTGKNVRDWLYVEDHV 224
>gi|4539118|emb|CAB39839.1| (AL049491) putative dTDP-(glucose or
rhamnose)-4,6-dehydratase [Mycobacterium leprae]
Length = 331
Score = 62.5 bits (149), Expect = 6e-09
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Frame = +1
Query: 166 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
+ LV+ ++TD RL+ A V + AA++ V + D P +G +LEA+
Sbjct: 51 VRLVQGNITDTKLVFRLV--AESDVVVHFAAETHVDNALDDPEPFLRTNVIGTFTILEAV 108
Query: 346 RIVNPKIRFYQASTSEMFGKVQ---QTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYG 516
R + +R + ST E++G ++ T E TP+ P SPY K + + SYG
Sbjct: 109 R--HHSVRLHHISTDEVYGDLELDEPTRFTESTPYNPSSPYSATKAAGDMLVRAWVRSYG 166
Query: 517 IFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVD 693
+ A N+ P + F+ R+IT+ + G+ L G RDW ++
Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVLT----GRRPKL-YGTGVNVRDWIHVDDHNS 221
Query: 694 GMWRMLQ 714
+W++L+
Sbjct: 222 AVWQILE 228
>gi|4574160|gb|AAD23919.1|AF083467_3 (AF083467) dTDP-D-glucose
4,6-dehydratase [Neisseria meningitidis]
Length = 341
Score = 62.1 bits (148), Expect = 8e-09
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 14/277 (5%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
IA +P+ + D+ D + R+ P V +LAA+S V S VG
Sbjct: 47 IADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTF 106
Query: 328 NLLEAIRIVNPKI--------RFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 477
NLLEA R ++ RF+ ST E++G + T + E P+ P SPY +K
Sbjct: 107 NLLEAARAYRQQMPSEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKAS 166
Query: 478 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKL---GN 648
+ + + +YG+ N+ P + I ++ L LD L G+
Sbjct: 167 SDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-------KLIPLMILNALDGKPLPVYGD 219
Query: 649 LDAKRDWGFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQ 825
RDW F +++ +++++ + +T+ + + + + V + ++ +
Sbjct: 220 GMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLE-------E 272
Query: 826 AERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
E VA + L+T RP + AK R LGW+P T E
Sbjct: 273 LAPEKPAGVARYEDLITFVQD--RPGHDARYAVDTAKIRRDLGWQPLETFE 321
>gi|2621713 (AE000844) UDP-glucose 4-epimerase [Methanobacterium
thermoautotrophicum]
Length = 325
Score = 61.7 bits (147), Expect = 1e-08
Identities = 82/322 (25%), Positives = 133/322 (40%), Gaps = 20/322 (6%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGY---VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
+I G G G+++ + L E GY ++ R W +E +L
Sbjct: 3 LIVGGAGYIGSHVNKFLSERGYETLILDNLTRGHRDFVKWG------------EFIEGNL 50
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
D R E V + AA + VG S +P V +NLL+++ V+ +R
Sbjct: 51 GDRRLLDRTFETHDVDAVMHFAAFTDVGESVLKPGRYYHNNVVNTINLLDSM--VDHGVR 108
Query: 370 -FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 546
F +ST ++G + P EE P P SPYG +KL + +YR++YG+ S FN
Sbjct: 109 DFIFSSTCAVYGNPMEIPISEEHPLNPISPYGRSKLMVEEILGDYRDAYGLNYVSLRYFN 168
Query: 547 --HESPLRARDFVTRKITHAIAM---IKLGKLDVLKLGNLD-------AKRDWGFAKEYV 690
P + TH I + + LG D +++ D RD+ +
Sbjct: 169 AAGADPEGEVGELHNPETHLIPIVLDVALGLRDAVRIFGTDYPTPDGTCVRDYIHVMDLA 228
Query: 691 DGMW---RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASG 861
D W R L+ E F L +V + + +G
Sbjct: 229 DAHWRALRYLEGGESGVFNLGNGNGFSVMEVIETCRE--------------------VTG 268
Query: 862 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPK-TTLEEL 984
++ + RP + L+G+ +AR LGW P+ T LE++
Sbjct: 269 ASINAVEDD-RRPGDPPELVGSAGRARRVLGWRPEFTELEDI 309
>gi|418374|sp|P33119|GALE_CORDI UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|144973 (M34239) ORF3 [Corynebacterium diphtheriae]
>gi|144977 (M80338) open reading frame [Corynebacterium
diphtheriae]
Length = 328
Score = 61.7 bits (147), Expect = 1e-08
Identities = 79/318 (24%), Positives = 144/318 (44%), Gaps = 5/318 (1%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
++TG G G+ + +LLE G+ V T + + LG VE D+ D+
Sbjct: 4 LVTGGAGYVGSVCSTVLLEQGHEV--TIVDNLTTGNRDAVPLGAT------FVEGDIKDV 55
Query: 199 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 378
+ +V L + V + AA+S VG S ++P V + LL+A++ N + +
Sbjct: 56 AENV--LSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVRNIVF- 112
Query: 379 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHESP 558
+ST+ +G+ + P E+ P +P +PYG KL + +Y +YG FAA+ + + + +
Sbjct: 113 SSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYG-FAATSLRYFNVAG 171
Query: 559 LRARDFVTRKI-THAIAM---IKLGKLD-VLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 723
R+I TH I + + LG D + G+ D ++Y+ + +
Sbjct: 172 AYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYI----HIRDLAD 227
Query: 724 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 903
L +N + R F + ++ Q C +V + P+ R
Sbjct: 228 AHILALQSNVEGSHRIFNLGSGEGYSVK-----QVIDTCR-EVTGHPIPAEVAPR--RAG 279
Query: 904 EVDLLIGNPAKARTKLGWEPKTT 972
+ +LI + AKA+++LGW+P+ T
Sbjct: 280 DPAVLIASSAKAQSELGWKPQRT 302
>gi|3033515|gb|AAC12869.1| (AF044332)
dTDP-D-glucose-4,6-dehydratase; RffG [Erwinia carotovora
subsp. atroseptica]
Length = 357
Score = 61.3 bits (146), Expect = 1e-08
Identities = 77/326 (23%), Positives = 134/326 (40%), Gaps = 14/326 (4%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLL---EMGYVVYGTYRRSSSLNFWRINELGIAQHPKLH 171
M K +ITG G G+ L + +L + VV + +L+ + +A +
Sbjct: 1 MALKRILITGGAGFIGSALVRYILAETQDSVVVVDKLTYAGNLS----SLAPVADSSRFA 56
Query: 172 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR- 348
+ D+ D + R+ P V +LAA+S V S D P + VG +LEA R
Sbjct: 57 FEQVDICDRAELDRVFTAYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARH 116
Query: 349 -------IVNPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVNY 501
RF+ ST E+FG + T + E TP+ P SPY +K + + +
Sbjct: 117 YWQNLADADKNAFRFHHISTDEVFGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAW 176
Query: 502 RESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAK 681
+YG N+ P F + I I GK + G+ RDW F +
Sbjct: 177 LRTYGFPTVITNCSNNYGPYH---FPEKLIPLVILNAVAGK-PLPVYGDGAQIRDWLFVE 232
Query: 682 EYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVAS 858
++ +++++ + + +T+ + + + V + ++ + VA
Sbjct: 233 DHARALYKVVTEGEVGETYNIGGHNERKNIEVVQTICALLE-------ELAPNKPAGVAH 285
Query: 859 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
+ L+T RP + K +LGW P+ T E
Sbjct: 286 YRDLITYVKD--RPGHDMRYAIDAGKIERELGWRPEETFE 323
>gi|3927825|gb|AAC79582.1| (AC005727) putative nucleotide-sugar
dehydratase [Arabidopsis thaliana]
Length = 343
Score = 60.9 bits (145), Expect = 2e-08
Identities = 79/332 (23%), Positives = 132/332 (38%), Gaps = 9/332 (2%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMG---YVVYGTYRRSSSLNFWRINELGIAQHPKLHLV 177
N ++TG G G++L L++ +V Y S N + HP+ L+
Sbjct: 30 NMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKW-----IGHPRFELI 84
Query: 178 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
+D+T+ ++Y+LA + P+ T +G +N+L + V
Sbjct: 85 RHDVTEPL-------FVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 137
Query: 358 PKIRFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIF 522
+I STSE++G PQ E P RS Y K A + +Y +GI
Sbjct: 138 ARILL--TSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 195
Query: 523 AASGILFNHESPLRARDFVTRKITHAIAMIKLGK-LDVLKLGNLDAKRDWGFAKEYVDGM 699
+FN P D R +++ IA G+ L V K G R + + + V+G+
Sbjct: 196 IRIARIFNTYGPRMNIDD-GRVVSNFIAQALRGEALTVQKPGT--QTRSFCYVSDMVEGL 252
Query: 700 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 879
R+++ D+ + T+ + + +E K +V
Sbjct: 253 MRLMEGDQTGPINIGNPGEFTMVELAETVKELIKPDVEIK----------------MVEN 296
Query: 880 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMME 1002
P R + D+ +KA+ LGWEPK L E +M E
Sbjct: 297 TPDDPRQRKPDI-----SKAKEVLGWEPKVKLREGLPLMEE 332
>gi|1710103|sp|P55294|RFBB_NEIME DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|388933 (L09188) TDP-glucose-dehydratase [Neisseria
meningitidis]
Length = 360
Score = 60.5 bits (144), Expect = 2e-08
Identities = 69/277 (24%), Positives = 117/277 (41%), Gaps = 14/277 (5%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
IA +P+ + D+ D + R+ P V +LAA+S V S VG
Sbjct: 52 IADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTF 111
Query: 328 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 477
NLLEA R + RF+ ST E++G + T + E TP+ P SPY +K
Sbjct: 112 NLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAS 171
Query: 478 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKL---GN 648
+ + + +YG+ N+ P + I ++ L LD L G+
Sbjct: 172 SDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-------KLIPLMILNALDGKPLPVYGD 224
Query: 649 LDAKRDWGFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQ 825
RDW F +++ +++++ + +T+ + + + + V + ++ +
Sbjct: 225 GMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICTLLE-------E 277
Query: 826 AERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
E VA + L+T RP + AK R LGW P T E
Sbjct: 278 LVPEKPAGVARYEDLITFVQD--RPGHDVRYAVDAAKIRRDLGWLPLETFE 326
>gi|2708270 (U78089) UDP-glucose epimerase [Brucella abortus]
Length = 335
Score = 60.1 bits (143), Expect = 3e-08
Identities = 78/326 (23%), Positives = 141/326 (42%), Gaps = 17/326 (5%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 192
++TG G G++ L+E G+ VV + S RI ++ + P+ D+
Sbjct: 4 LVTGGAGYIGSHTCVQLIEAGHEVVVVDNFDNSHPEALHRIEKI-TGRAPRRE--PGDIR 60
Query: 193 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 372
D + ++++ V + A VG S ++PL D +G + LL+A+ K +
Sbjct: 61 DRALMEQVIKRHKCTAVIHFAGLKAVGESSEKPLLYYDCNVLGTLRLLQAMEATGVK-KL 119
Query: 373 YQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LFN- 546
+S++ ++G + P E+ P +PYG KL M + S +A + + FN
Sbjct: 120 VFSSSATVYGDPDKLPITEDQPLSATNPYGRTKLVIEDMLRDLYNSDNSWAIAILRYFNP 179
Query: 547 ---HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLD-------AKRDWGFAKEYV 690
HES L D + + IA + G+ + L + D RD+ +
Sbjct: 180 VGAHESGLIGEDPKGIPNNLMPIIAQVATGRREKLNIWGNDYPTPDGTGVRDYIHVNDLA 239
Query: 691 DGMWRMLQA-DEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKT 867
G + L+ D+P F + + S +D+ ++ + RE ++A
Sbjct: 240 AGHLKALKKLDKPKCFAVNLGTGQ--------GYSVLDVIKAFEHVSNREIKYEIA---- 287
Query: 868 LVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMM 996
P+ RP +V +P A+ LGW + L E+C M
Sbjct: 288 -----PR--RPGDVAECYADPGFAKKFLGWSAEKNLREMCQDM 323
>gi|3891921|pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E.
Coli
Length = 341
Score = 60.1 bits (143), Expect = 3e-08
Identities = 48/185 (25%), Positives = 79/185 (41%), Gaps = 10/185 (5%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
+AQ + + D+ D + R+ P V +LAA+S V S D P + VG
Sbjct: 47 VAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTY 106
Query: 328 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 477
LLEA R RF+ ST E++G + T E TP+ P SPY +K
Sbjct: 107 TLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKAS 166
Query: 478 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 657
+ + + +YG+ N+ P K+ + + L + GN
Sbjct: 167 SDHLVRAWLRTYGLPTLITNCSNNYGPYH----FPEKLIPLMILNALAGKSLPVYGNGQQ 222
Query: 658 KRDWGFAKEYVDGMW 702
RDW + +++ ++
Sbjct: 223 IRDWLYVEDHARALY 237
>gi|421103|pir||S30682 hypothetical protein o355 - Escherichia coli
>gi|148191 (M87049) possibly rffE;
(UDP-GlcNAc-2-epimerase) [Escherichia coli]
Length = 355
Score = 60.1 bits (143), Expect = 3e-08
Identities = 48/185 (25%), Positives = 79/185 (41%), Gaps = 10/185 (5%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
+AQ + + D+ D + R+ P V +LAA+S V S D P + VG
Sbjct: 47 VAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTY 106
Query: 328 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 477
LLEA R RF+ ST E++G + T E TP+ P SPY +K
Sbjct: 107 TLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKAS 166
Query: 478 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 657
+ + + +YG+ N+ P K+ + + L + GN
Sbjct: 167 SDHLVRAWLRTYGLPTLITNCSNNYGPYH----FPEKLIPLMILNALAGKSLPVYGNGQQ 222
Query: 658 KRDWGFAKEYVDGMW 702
RDW + +++ ++
Sbjct: 223 IRDWLYVEDHARALY 237
>gi|2506450|sp|P27830|RFFG_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1790223 (AE000455) dTDP-glucose 4,6-dehydratase
[Escherichia coli]
Length = 355
Score = 60.1 bits (143), Expect = 3e-08
Identities = 48/185 (25%), Positives = 79/185 (41%), Gaps = 10/185 (5%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
+AQ + + D+ D + R+ P V +LAA+S V S D P + VG
Sbjct: 47 VAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTY 106
Query: 328 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 477
LLEA R RF+ ST E++G + T E TP+ P SPY +K
Sbjct: 107 TLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKAS 166
Query: 478 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 657
+ + + +YG+ N+ P K+ + + L + GN
Sbjct: 167 SDHLVRAWLRTYGLPTLITNCSNNYGPYH----FPEKLIPLMILNALAGKSLPVYGNGQQ 222
Query: 658 KRDWGFAKEYVDGMW 702
RDW + +++ ++
Sbjct: 223 IRDWLYVEDHARALY 237
>gi|3891922|pdb|1BXK|B Chain B, Dtdp-Glucose 4,6-Dehydratase From E.
Coli
Length = 344
Score = 60.1 bits (143), Expect = 3e-08
Identities = 48/185 (25%), Positives = 79/185 (41%), Gaps = 10/185 (5%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
+AQ + + D+ D + R+ P V +LAA+S V S D P + VG
Sbjct: 47 VAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTY 106
Query: 328 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 477
LLEA R RF+ ST E++G + T E TP+ P SPY +K
Sbjct: 107 TLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKAS 166
Query: 478 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 657
+ + + +YG+ N+ P K+ + + L + GN
Sbjct: 167 SDHLVRAWLRTYGLPTLITNCSNNYGPYH----FPEKLIPLMILNALAGKSLPVYGNGQQ 222
Query: 658 KRDWGFAKEYVDGMW 702
RDW + +++ ++
Sbjct: 223 IRDWLYVEDHARALY 237
>gi|2072420 (U75690) GDP-D-mannose dehydratase [Anabaena PCC7120]
Length = 76
Score = 60.1 bits (143), Expect = 3e-08
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLV 177
NK A+ITGITGQDG+YL++ L+E GY V+G RR+S+ N RI+ + H +L L
Sbjct: 4 NKRALITGITGQDGSYLSEFLIEQGYEVHGIIRRTSTFNTDRIDHIYEDPHQEGARLFLH 63
Query: 178 EYDLTD 195
DLTD
Sbjct: 64 YGDLTD 69
>gi|2104387|emb|CAB08730| (Z95390) rmlB [Mycobacterium tuberculosis]
Length = 331
Score = 59.7 bits (142), Expect = 4e-08
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Frame = +1
Query: 166 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
+ LV+ D+TD +L+ A V + AA+S V + D P +G +LEA+
Sbjct: 51 IRLVQGDITDAELVSQLV--AESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAV 108
Query: 346 RIVNPKIRFYQASTSEMFGKVQQTPQI---EETPFYPRSPYGIAKLYAHWMTVNYRESYG 516
R +R + ST E++G ++ + E TP+ P SPY K A + + SYG
Sbjct: 109 R--RHGVRLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYG 166
Query: 517 IFAASGILFNHESPLR-ARDFVTRKITHAI 603
+ A N+ P + F+ R+IT+ +
Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVL 196
>gi|2738953 (AF021920) GDP-D-mannose dehydratase homolog [Brucella
abortus] >gi|2827432 (AF043475) GDP-D-mannose
dehydratase [Brucella melitensis]
Length = 53
Score = 59.7 bits (142), Expect = 4e-08
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +1
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
LTD SS VR+++L P EVYNL AQS V VSF++P T + +GA+ LLEAI
Sbjct: 1 LTDTSSLVRIMQLVRPDEVYNLGAQSHVAVSFEEPEYTANSDALGALRLLEAI 53
>gi|6015647|emb|CAB57474.1| (Y18930) dTDP-glucose 4,6-dehydratase
(rfbB) [Sulfolobus solfataricus]
Length = 317
Score = 59.3 bits (141), Expect = 5e-08
Identities = 52/174 (29%), Positives = 82/174 (46%), Gaps = 6/174 (3%)
Frame = +1
Query: 163 KLHLVEYDLTDLSSSVR------LLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGA 324
K +L+ D + + VR +++ +P V N AA++ V S +P +G
Sbjct: 39 KENLIGTDYDFVQADVRSEKMHDIIKEYSPDIVINFAAETHVDRSIYKPQDFVTTNVLGT 98
Query: 325 VNLLEAIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYR 504
VNLLEA R N ++ ST E++G + E +P P SPY +K A Y
Sbjct: 99 VNLLEASRKFN--FKYVHISTDEVYG---EECGDENSPLKPSSPYSASKASADLFVKAYV 153
Query: 505 ESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKE 684
+YGI S ++ + R F + I AI LG + + G+ A+RDW F ++
Sbjct: 154 RTYGI---SAVIVRPSNNYGPRQFPEKLIPKAIIRTLLG-IHIPVYGDGKAERDWIFVED 209
>gi|604222 (U09349) UDP-glucose 4-epimerase [Azospirillum
brasilense]
Length = 338
Score = 58.9 bits (140), Expect = 7e-08
Identities = 81/318 (25%), Positives = 133/318 (41%), Gaps = 21/318 (6%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
+ ++TG G G++ LL+ G+ VV R+ +A VE D
Sbjct: 6 TVLVTGGAGYVGSHCVAELLDRGFRVVVLDNLRQGHR----------VAVPSDAAFVEAD 55
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
L D+ + R+ V++ AA S VG S P V ++NL+ A +
Sbjct: 56 LADMDALTRVFAEWRFDAVFHFAALSLVGESMRDPHLYLHGNTVNSLNLIRAATTAGVRK 115
Query: 367 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLY----AHWMTVNYRESYGIFAASG 534
+ +ST+ +FG ++ P EET P SPYG +K + HW +G+ +A
Sbjct: 116 MVF-SSTANLFGTPERLPIDEETTIDPGSPYGESKFFIERALHWAD----RCHGLRSACL 170
Query: 535 ILFN----HESPLRARDFVTRKITHAIAMI----KLGKLDVLKLGNLDAKRDWGFAKEYV 690
FN H + D TH I ++ G+ + G+ D ++Y+
Sbjct: 171 RYFNAAGAHPNGTLGEDHAPE--THLIPLVLDAPAAGRSHIEIFGDDYPTADGTCVRDYI 228
Query: 691 ------DGMWRMLQADEP-DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 849
D R+L A E F L +VR+ ++ ER G+
Sbjct: 229 HVCDLADAHLRVLPALETRSRFNLGNGTGYSVREVIA--------------ATERVTGLT 274
Query: 850 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPK 966
V V + P+ R + +LI + + R +LGW P+
Sbjct: 275 VP-----VRVGPR--RAGDPAVLIASSERIRGELGWSPR 306
>gi|1653034|dbj|BAA17951| (D90910) UDP-glucose 4-epimerase
[Synechocystis sp.]
Length = 338
Score = 58.9 bits (140), Expect = 7e-08
Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Frame = +1
Query: 241 VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQASTSEMFGKVQQTP 420
V + AA VG S +P VG + LLEA+ K +F +ST ++G ++ P
Sbjct: 75 VMHFAAFIAVGESVQKPDIYYQNNVVGTLTLLEAMLAAGIK-KFVFSSTCAVYGMPKEIP 133
Query: 421 QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHE--SPLRARDFVTRKIT 594
E P P SPY +K + ++ ++YG + FN P T
Sbjct: 134 MTESHPIDPLSPYAASKRMVEQILADFDQAYGFKSVIFRYFNASGADPQGRLGEDHNPET 193
Query: 595 HAIAMIKLGKL---DVLKLGNLD-------AKRDW----GFAKEYVDGMWRMLQADEPDT 732
H I + L L L + D A RD+ A +V G+ +L+ E +
Sbjct: 194 HLIPLALLTALKQRPQLSVFGTDYDTLDGTALRDYIHVCDLAIAHVLGLQYLLEGGESNI 253
Query: 733 FVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEVD 912
F L +VR + +A + + + ++ + P+ RP +
Sbjct: 254 FNLGNGNGFSVRQVIEVAKAVTGLDIPYQ-------------------LCPR--RPGDAP 292
Query: 913 LLIGNPAKARTKLGWEPK 966
+L+G+ AKAR LGW P+
Sbjct: 293 ILVGSSAKAREILGWNPQ 310
>gi|1730193|sp|P55180|GALE_BACSU UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1429254|emb|CAA67713| (X99339) UDP-glucose
4-epimerase [Bacillus subtilis]
>gi|1783241|dbj|BAA11718| (D83026) highly homologous to
UDP-glucose 4-epimerases (SwissProt:GALE_HAEIN and
GALE_ECOLI); hypothetical [Bacillus subtilis]
>gi|2636421|emb|CAB15912| (Z99123) UDP-glucose
4-epimerase [Bacillus subtilis]
Length = 339
Score = 58.9 bits (140), Expect = 7e-08
Identities = 79/323 (24%), Positives = 133/323 (40%), Gaps = 14/323 (4%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 192
++TG G G++ LL GY VV SS+ R+ E+ L E DL
Sbjct: 4 LVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEI---TGKDLTFYEADLL 60
Query: 193 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 372
D + + + V + A VG S PL G L EA+ K +
Sbjct: 61 DREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGVK-KI 119
Query: 373 YQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHE 552
+S++ ++G + +P E+ P +PYG KL + + + ++ + L +
Sbjct: 120 VFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLHTADNEWSVA--LLRYF 177
Query: 553 SPLRAR---------DFVTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAKEYVDGMW 702
+P A + + + +A + +GKL+ L + GN +D ++Y+
Sbjct: 178 NPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGVRDYI---- 233
Query: 703 RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTIN 882
++ E L T D +L LE E+ G +V
Sbjct: 234 HVVDLAEGHVKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPY-------- 285
Query: 883 PKFY--RPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
+F RP ++ +PAKA+ +LGWE K LEE+C
Sbjct: 286 -RFADRRPGDIATCFADPAKAKRELGWEAKRGLEEMC 321
>gi|2116765|dbj|BAA20116| (D86418) YfnG [Bacillus subtilis]
>gi|2633041|emb|CAB12547| (Z99107) similar to
CDP-glucose 4,6-dehydratase [Bacillus subtilis]
Length = 301
Score = 58.9 bits (140), Expect = 7e-08
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +1
Query: 163 KLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEA 342
K+++V L DL+ R L V++LAAQ+ VGV+ P++T + +G N+LEA
Sbjct: 33 KMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEA 92
Query: 343 IRIVNPKI-RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 519
R +P I R AS+ + +G + P E P + PY ++K A ++ Y +YG+
Sbjct: 93 CR-KHPLIKRVIVASSDKAYGDQENLPYDENMPLQGKHPYDVSKSCADLISHTYFHTYGL 151
>gi|3832507 (AF097519) dTDP-D-glucose 4,6 dehydratase [Klebsiella
pneumoniae]
Length = 354
Score = 58.6 bits (139), Expect = 9e-08
Identities = 69/277 (24%), Positives = 117/277 (41%), Gaps = 13/277 (4%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
+A + + D+TD ++ P V +LAA+S V S D P +G
Sbjct: 46 VAGSERYSFSQTDITDAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIHTNVIGTF 105
Query: 328 NLLEAIR-----IVNPK---IRFYQASTSEMFG---KVQQTPQIEETPFYPRSPYGIAKL 474
LLEA R +V + RF+ ST E++G + Q T ++T + P SPY +K
Sbjct: 106 TLLEAARHYWSGLVEEQKQAFRFHHISTDEVYGDLHRSQSTCPPKKTSYAPSSPYSASKA 165
Query: 475 YAHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLD 654
+ + + +YG+ N+ P F + I I GK + GN +
Sbjct: 166 GSDHLVRAWNRTYGLPLVVTNCSNNYGPYH---FPEKLIPLTILNALAGK-PLPVYGNGE 221
Query: 655 AKRDWGFAKEYVDGMWRM-LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAE 831
RDW + +E+ ++++ + +T+ + + D V + +D K A+
Sbjct: 222 QIRDWLYVEEHARALYKVATEGKSGETYNIGGHNERKNIDVVRTICTILD-----KVVAQ 276
Query: 832 RECGV-DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
+ + A T VT P +D K + LGW P+ T E
Sbjct: 277 KPGNITHFADLITFVTDRPGHDLRYAID-----ATKIQRDLGWVPQETFE 321
>gi|1143204 (U34305) ORF2; Method: conceptual translation supplied
by author. [Shigella sonnei]
Length = 341
Score = 58.2 bits (138), Expect = 1e-07
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 8/233 (3%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINEL-GIAQHPKLHLVE 180
K+ +ITG+ G G+ L + LL++ VV G + N + L Q + +E
Sbjct: 16 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE 75
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
D+ DL++ ++++ V + AA V S P+TT G +N+L A + N
Sbjct: 76 GDIRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK--NA 131
Query: 361 KIR-FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 537
+++ F A++S +G P++EE P SPY + K Y +YG+
Sbjct: 132 QVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGVKTIGLR 191
Query: 538 LFN----HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 705
FN + P A V K T A+ L DV G+ + RD+ Y+D + +
Sbjct: 192 YFNVFGRRQDPNGAYAAVIPKWTAAM----LKGDDVYINGDGETSRDFC----YIDNVIQ 243
Query: 706 M 708
M
Sbjct: 244 M 244
>gi|1230585 (U47057) nucleotide sugar epimerase [Vibrio cholerae
O139] >gi|3724324|dbj|BAA33613.1| (AB012956) probable
nucleotide sugar epimerase [Vibrio cholerae]
>gi|1588979|prf||2209416J nucleotide sugar epimerase
[Vibrio cholerae]
Length = 334
Score = 57.8 bits (137), Expect = 1e-07
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 10/230 (4%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRIN----ELGIAQHPKLHLVEYD 186
++TG G G+ + L E G+ V G + +++ +N L +HP H ++ D
Sbjct: 4 LVTGAAGFIGSATVKKLTEQGHHVVGI---DNINDYYDVNLKHARLARIEHPLFHFLKVD 60
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D ++ +L E + V +LAAQ+ V S + P D VG +N+LE R N
Sbjct: 61 IADRAAMAQLFEQEKFERVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR-QNKVG 119
Query: 367 RFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
AS+S ++G + P ++ +P S Y K M +Y Y I +G+ F
Sbjct: 120 HLVYASSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLYDI-PTTGLRF 178
Query: 544 -----NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
+ P A T+KI A +D+ G D RD+ + V+G+ R+
Sbjct: 179 FTVYGSWGRPDMAPFIFTKKILAGEA------IDINNHG--DMWRDFTHVDDIVEGVVRI 230
>gi|3721693|dbj|BAA33643.1| (AB012957) probable nucleotide sugar
epimerase [Vibrio cholerae]
Length = 334
Score = 57.8 bits (137), Expect = 1e-07
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 10/230 (4%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRIN----ELGIAQHPKLHLVEYD 186
++TG G G+ + L E G+ V G + +++ +N L +HP H ++ D
Sbjct: 4 LVTGAAGFIGSATVKKLTEQGHHVVGI---DNINDYYDVNLKHSRLARIEHPLFHFLKVD 60
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D ++ +L E + V +LAAQ+ V S + P D VG +N+LE R N
Sbjct: 61 IADRAAMAQLFEQEKFERVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR-QNKVG 119
Query: 367 RFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
AS+S ++G + P ++ +P S Y K M +Y Y I +G+ F
Sbjct: 120 HLVYASSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLYDI-PTTGLRF 178
Query: 544 -----NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
+ P A T+KI A +D+ G D RD+ + V+G+ R+
Sbjct: 179 FTVYGSWGRPDMAPFIFTKKILAGEA------IDINNHG--DMWRDFTHVDDIVEGVVRI 230
>gi|1890603|emb|CAB01951| (Z79692) ExpA9 [Sinorhizobium meliloti]
Length = 356
Score = 57.8 bits (137), Expect = 1e-07
Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 11/277 (3%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
+ P D+ D ++++ + +LAA+S V S + P + +G V
Sbjct: 46 VESDPHYAFYRADIRDEQVLLQIMRRERIDAIMHLAAESHVDRSIESPDPFMETNVLGTV 105
Query: 328 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 477
LL A + RF+ ST E+FG + I EET + P SPY +K
Sbjct: 106 RLLNAALAYWSGLGTEERGRFRFHHVSTDEVFGDLPFNRGIFSEETRYAPSSPYAASKAA 165
Query: 478 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 657
A + +YG+ N+ P + K+ + + + + G+
Sbjct: 166 ADHFARAWYHTYGLPVVVSNCSNNYGPFHFPE----KLIPLTIINAIEEKPLPLYGSGAN 221
Query: 658 KRDWGFAKEYVDGMWRMLQADEP-DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAER 834
RDW ++ + ++ P +++ + + +D++L KG
Sbjct: 222 VRDWLHVADHATALELVVSRGRPGESYNIGARAERNNLSVMECICDLLDVRLPRKGGD-- 279
Query: 835 ECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
S + L+T+ P RP +P+KA +LGW PK + E
Sbjct: 280 -------SYRDLITLVPD--RPGHDRRYAIDPSKAERELGWRPKRSFE 318
>gi|1173555 (U31544) UDP-galactose-4-epimerase [Pisum sativum]
Length = 350
Score = 57.8 bits (137), Expect = 1e-07
Identities = 74/327 (22%), Positives = 141/327 (42%), Gaps = 15/327 (4%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVV--YGTYRRSSSLNFWRINEL-GIAQHPKLHLV 177
++ ++TG G G + LL G+ V + S R+ E+ G L
Sbjct: 5 SQKILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFT 64
Query: 178 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
DL + +L + V + A VG S + P D VG +NL E + N
Sbjct: 65 LGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHN 124
Query: 358 PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 537
K + +S + ++G+ ++ P +E+ +PYG KL+ + + +++ + +
Sbjct: 125 CKKMVFSSSAT-VYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRI--V 181
Query: 538 LFNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLD-AKRDWGFAKEY 687
L + +P+ A + + + I + +G+L L + D RD ++Y
Sbjct: 182 LLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDY 241
Query: 688 VDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQL-EWKGQAERECGVDVASGK 864
+ M D D + A + T + + +A ++ E + ASGK
Sbjct: 242 IHVM------DLADGHIAALRKLFTSEN---IGCTAYNLGTGRGSSVLEMVAAFEKASGK 292
Query: 865 TL-VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
+ + + P+ RP + + + AKA +LGW+ K +EE+C
Sbjct: 293 KIALKLCPR--RPGDATEVYASTAKAEKELGWKAKYGVEEMC 332
>gi|4234803|gb|AAD12971.1| (AF078135) RmlB [Leptospira
borgpetersenii]
Length = 349
Score = 57.4 bits (136), Expect = 2e-07
Identities = 78/323 (24%), Positives = 135/323 (41%), Gaps = 13/323 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLL----EMGYVVYG--TYRRS-SSLNFWRINELGIAQHPKL 168
K ++TG G G+ L+L E +V+ TY + SL +W+ + P+
Sbjct: 2 KKILVTGGAGFIGSNFVNLILNENEEYQIIVFDKLTYAGNLKSLEYWK-------KDPRF 54
Query: 169 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
++ D+ + + + + V + AA+S V S P +G LL+A R
Sbjct: 55 IFIKADIANKENVFSIFQEHNFDYVAHFAAESHVDRSILGPEEFIKTNVLGTFYLLDAAR 114
Query: 349 IV----NPKIRFYQASTSEMFGKVQQTPQI-EETPFYPRSPYGIAKLYAHWMTVNYRESY 513
+ +F ST E+FG + T EETP+ P SPY +K + + +Y +Y
Sbjct: 115 LQWNGSYEGKKFLHVSTDEVFGTLGDTGYFTEETPYAPNSPYSASKAGSDHIVRSYYHTY 174
Query: 514 GIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVD 693
+ + N+ P F + I I GK + G+ RDW + K++ +
Sbjct: 175 HMPVVTTNCSNNYGPYH---FPEKLIPLTILNCLQGK-PLPVYGDGKNIRDWLYVKDHCE 230
Query: 694 GM-WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTL 870
+ + Q +T+ + T + D V+ S +D + G V K +
Sbjct: 231 ALRLALFQGLPGETYNIGTRNEKKNIDIVNSICSIMD-EFHPSG---------VPHSKLI 280
Query: 871 VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
+ RP +P+K +LGW+PK E
Sbjct: 281 QYVKD---RPGHDFRYAIDPSKIEKELGWKPKFVFE 313
>gi|1172921|sp|P44914|RFFG_HAEIN DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1075419|pir||C64099 UDP-N-acetylglucosamine
epimerase (rffE) homolog - Haemophilus influenzae
(strain Rd KW20) >gi|1573891 (U32769) DTDP-glucose
4,6-dehydratase (rffG) [Haemophilus influenzae Rd]
Length = 338
Score = 57.0 bits (135), Expect = 3e-07
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 10/188 (5%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
+ +P+ + D+ DL+ + E P V +LAA+S V S VG
Sbjct: 47 VENNPRYVFEKVDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTY 106
Query: 328 NLLEAIR--------IVNPKIRFYQASTSEMFG--KVQQTPQIEETPFYPRSPYGIAKLY 477
LLE + RF+ ST E++G + + E++P++P SPY +K
Sbjct: 107 TLLEVAKNYWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAA 166
Query: 478 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 657
++ + + +YG+ I+ N + A + I I+ +GK + G+
Sbjct: 167 SNHLVQAWHRTYGL---PVIITNSSNNYGAYQHAEKLIPLMISNAVMGK-PLPIYGDGQQ 222
Query: 658 KRDWGFAKEYVDGMWRML 711
RDW F +++V + +L
Sbjct: 223 IRDWLFVEDHVQASYLVL 240
>gi|1314581 (U51197) dTDP-D-glucose-4,6-dehydratase [Sphingomonas
S88]
Length = 353
Score = 57.0 bits (135), Expect = 3e-07
Identities = 80/320 (25%), Positives = 128/320 (40%), Gaps = 12/320 (3%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
++TG G G+ + + L+ G V + + + N + I P V D+ D
Sbjct: 6 LVTGGAGFIGSAVVRHLVRQGARVINLDKLTYAGNPASLT--AIENAPNYRFVHADIADT 63
Query: 199 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI-----RIVNPK 363
++ + LL V +LAA+S V S D P + VG LL+A + K
Sbjct: 64 ATILPLLREEQVDVVMHLAAESHVDRSIDGPGEFIETNVVGTFKLLQAALQYWRELEGEK 123
Query: 364 ---IRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
RF+ ST E+FG + I EETP+ P SPY +K + + + +YG+
Sbjct: 124 REAFRFHHISTDEVFGDLPFDSGIFTEETPYDPSSPYSASKAASDHLVRAWGHTYGLPVV 183
Query: 529 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
N+ P F + I I GK + G + RDW + ++ + +
Sbjct: 184 LSNCSNNYGPFH---FPEKLIPLTILNALEGK-PLPVYGKGENIRDWLYVDDHAKALATI 239
Query: 709 LQADEPDTFVLATNRTE-TVRDFVSLAASAVDIQLEWK-GQAERECGVDVASGKTLVTIN 882
+ R E T V +D ++ K G+ RE T VT
Sbjct: 240 ATTGKVGQSYNVGGRNERTNLQVVETICDLLDQRIPLKDGKKRREL-------ITFVTDR 292
Query: 883 PKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
P R +D K T+LGW+ + +
Sbjct: 293 PGHDRRYAID-----ATKLETELGWKAEENFD 319
>gi|6009649|dbj|BAA85007.1| (AB025970) ORF2P [Plesiomonas
shigelloides]
Length = 345
Score = 57.0 bits (135), Expect = 3e-07
Identities = 64/233 (27%), Positives = 105/233 (44%), Gaps = 8/233 (3%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINEL-GIAQHPKLHLVE 180
K+ +ITG+ G G+ L + LL++ VV G + N + L Q + +E
Sbjct: 20 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE 79
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
D+ DL++ ++++ V + AA V S P+TT G +N+L A + N
Sbjct: 80 GDIRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK--NA 135
Query: 361 KIR-FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 537
+++ F A++S +G P++EE P SPY + K Y +YG
Sbjct: 136 QVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLR 195
Query: 538 LFN----HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 705
FN + P A V K T A+ L DV G+ + RD+ Y+D + +
Sbjct: 196 YFNVFGRRQDPNGAYAAVIPKWTAAM----LKGDDVYINGDGETSRDFC----YIDNVIQ 247
Query: 706 M 708
M
Sbjct: 248 M 248
>gi|6009798|dbj|BAA85072.1| (AB028135) ORF2S [Shigella sonnei]
Length = 345
Score = 57.0 bits (135), Expect = 3e-07
Identities = 64/233 (27%), Positives = 105/233 (44%), Gaps = 8/233 (3%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINEL-GIAQHPKLHLVE 180
K+ +ITG+ G G+ L + LL++ VV G + N + L Q + +E
Sbjct: 20 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE 79
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
D+ DL++ ++++ V + AA V S P+TT G +N+L A + N
Sbjct: 80 GDIRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK--NA 135
Query: 361 KIR-FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 537
+++ F A++S +G P++EE P SPY + K Y +YG
Sbjct: 136 QVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLR 195
Query: 538 LFN----HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 705
FN + P A V K T A+ L DV G+ + RD+ Y+D + +
Sbjct: 196 YFNVFGRRQDPNGAYAAVIPKWTAAM----LKGDDVYINGDGETSRDFC----YIDNVIQ 247
Query: 706 M 708
M
Sbjct: 248 M 248
>gi|1098478 (L09189) dTDP-D-glucose 4,6-dehydratase [Neisseria
meningitidis]
Length = 355
Score = 56.6 bits (134), Expect = 3e-07
Identities = 68/277 (24%), Positives = 117/277 (41%), Gaps = 11/277 (3%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
IA +P+ + D+ D + R+ P V +LAA+S V S VG
Sbjct: 47 IADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTF 106
Query: 328 NLLEAIRIVNPKI--------RFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 477
NLLEA R ++ RF+ ST E++G + T + E P+ P SPY +K
Sbjct: 107 NLLEAARAYWQQMPSEQYEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKAS 166
Query: 478 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 657
+ + + +YG+ I+ N + F + I I GK + G+
Sbjct: 167 SDHLVRAWLRTYGL---PTIVTNCSNNYGLYHFPEKLIPLMILNALDGK-PLPVYGDGMQ 222
Query: 658 KRDWGFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAER 834
RDW F +++ +++++ + +T+ + + + + V + ++ +
Sbjct: 223 IRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLE-------ELAP 275
Query: 835 ECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
E VA + L+T RP + AK R LGW P T E
Sbjct: 276 EKPAGVARYEDLITFVQD--RPGHDVRYAVDAAKIRRDLGWLPLETFE 321
>gi|6469141|emb|CAB61752.1| (AJ275318) dTDP-glucose 4-6-dehydratase
[Cicer arietinum]
Length = 346
Score = 56.6 bits (134), Expect = 3e-07
Identities = 81/336 (24%), Positives = 135/336 (40%), Gaps = 9/336 (2%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMG---YVVYGTYRRSSSLNFWRINELGIAQHPKLHLV 177
N ++TG G G++L L+E +V Y S N + HP+ L+
Sbjct: 32 NMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKW-----IGHPRFELI 86
Query: 178 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
+D+T+ ++E+ ++Y+LA + P+ T +G +N+L + V
Sbjct: 87 RHDVTE----PLMIEV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
Query: 358 PKIRFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIF 522
+I STSE++G + PQ E P R+ Y K A + +Y +GI
Sbjct: 140 ARILL--TSTSEVYGDPLEHPQTESYWGNVNPNGVRNCYDEGKRVAETLMFDYHRQHGIE 197
Query: 523 AASGILFNHESPLRARDFVTRKITHAIAMIKLGK-LDVLKLGNLDAKRDWGFAKEYVDGM 699
+FN P D R +++ IA G+ L V G R + + + VDG+
Sbjct: 198 IRVARIFNTYGPRMNIDD-GRVVSNFIAQALRGESLTVQSPGT--QTRSFCYVSDLVDGL 254
Query: 700 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 879
R++ + L T+ + ++ +E K V
Sbjct: 255 IRLMGGSDTGPINLGNPGEFTMLELAETVKELINPNVEIK----------------TVEN 298
Query: 880 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVR 1014
P R + D+ KA+ LGWEPK L + +ME D R
Sbjct: 299 TPDDPRQRKPDI-----TKAKELLGWEPKVKLRDGL-PLMEGDFR 337
>gi|2494660|sp|Q45291|GALE_BRELA UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|2144276|pir||JC5168 UDPglucose 4-epimerase (EC
5.1.3.2) - Brevibacterium lactofermentum
>gi|1161517|emb|CAA89986| (Z49823) UDP-galactose
4-epimease [Corynebacterium glutamicum]
Length = 329
Score = 56.6 bits (134), Expect = 3e-07
Identities = 77/318 (24%), Positives = 133/318 (41%), Gaps = 4/318 (1%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
++TG G G+ A +LLE G+ V + NF N + + L+E D+ D+
Sbjct: 4 LVTGGAGYVGSVRAAVLLEHGHDV------TIIDNFSTGNREAVPADAR--LIEGDVNDV 55
Query: 199 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 378
V LLE + V + AA+S VG S ++P V A+ LL+A+R +
Sbjct: 56 VEEV-LLE-GGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVF- 112
Query: 379 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN---- 546
+ST+ +G+ P E+ P P + YG KL + +Y ++G+ A S FN
Sbjct: 113 SSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGA 172
Query: 547 HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEP 726
+ + R+ T I + + + + G+ D ++Y+ +L +
Sbjct: 173 YGNIGENREVETHLIPLVLQVATGHREKIFMFGDDWPTPDGTAVRDYI----HILDLAKA 228
Query: 727 DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAE 906
L +N R F + ++ Q C +V + P+ R +
Sbjct: 229 HVLALESNEAGKHRIFNLGSGDGYSVK-----QVVEMCR-EVTGHPIPAEVAPR--RAGD 280
Query: 907 VDLLIGNPAKARTKLGWEPKTT 972
LI + KA+ +LGW P+ T
Sbjct: 281 PATLIASSEKAKQELGWTPEHT 302
>gi|2622920 (AE000933) dTDP-glucose 4,6-dehydratase
[Methanobacterium thermoautotrophicum]
Length = 336
Score = 56.6 bits (134), Expect = 3e-07
Identities = 41/128 (32%), Positives = 58/128 (45%)
Frame = +1
Query: 136 NELGIAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITG 315
N G+ P+ V +TD +++ V N AA+S V S + P
Sbjct: 43 NLRGVEDEPRYTFVRGSITDRKLVDGIIKDV--DAVINFAAESHVDRSIEDPEIFIRTNI 100
Query: 316 VGAVNLLEAIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTV 495
+G LLEA R + RF Q ST E++G ++ EETP P SPY +K A M
Sbjct: 101 LGTQTLLEASRKHGVE-RFIQISTDEVYGSAEKGYFTEETPLAPNSPYSASKASADLMVR 159
Query: 496 NYRESYGI 519
Y +YG+
Sbjct: 160 AYHRTYGL 167
>gi|2983750 (AE000735) nucleotide sugar epimerase [Aquifex aeolicus]
Length = 321
Score = 56.6 bits (134), Expect = 3e-07
Identities = 76/321 (23%), Positives = 128/321 (39%), Gaps = 4/321 (1%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
++TG G G +++ LLE G+ V G +S + R+ E + Q K ++ ++
Sbjct: 4 LVTGCAGLIGWKVSEKLLEHGHRVIGVDNLNSYYDP-RLKEYRLEQLKKFENFKFYKVNI 62
Query: 199 SSSVRLLELAAPKE---VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
+ L L E V N AA++ V S P +G +NLLE ++ K +
Sbjct: 63 ENREALRILFQEFEFDAVINEAARAGVRYSIQNPHIYFTTNTLGNLNLLELMKEFGVK-K 121
Query: 370 FYQASTSEMFGKVQQTPQIEETPFY-PRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 546
ASTS ++ Q P EE P P SPY +K A Y YGI F
Sbjct: 122 LILASTSSLYAG-QPMPFKEELPVNTPISPYAASKKAAEVTAYTYHYLYGIDVVILRYFT 180
Query: 547 HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEP 726
D + L + + G+ KRD+ + + + + L
Sbjct: 181 VYGLAGRPDMAVFNFIYKT----LKGIPIKVYGDGSQKRDFTYVDDVAEATVKALNLKGY 236
Query: 727 DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAE 906
+ + N+ +++ + L ++ +GK + F++ A+
Sbjct: 237 EIINVGNNKPRALKELIEL--------------------IEKYTGKEVKVEYGDFHK-AD 275
Query: 907 VDLLIGNPAKARTKLGWEPKTTLEE 981
+ + KA+ LGWEPKT+LEE
Sbjct: 276 MRDTWADITKAKRLLGWEPKTSLEE 300
>gi|3135690 (AF064070) putative UDP-glucose 4-epimerase
[Burkholderia pseudomallei]
Length = 340
Score = 56.2 bits (133), Expect = 4e-07
Identities = 80/323 (24%), Positives = 140/323 (42%), Gaps = 26/323 (8%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 192
++TG G G++ A LL GY V+ S RI ++ + P H E D++
Sbjct: 8 LVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI-TGKTPAFH--ETDVS 64
Query: 193 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI-- 366
D + R+ + + AA VG S +P+ + +LL +R++ +
Sbjct: 65 DERALARIFDAHPITAAIHFAALKAVGESVAKPI---EYYRNNLDSLLSLLRVMRERAVK 121
Query: 367 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LF 543
R +S++ ++G +++P E P +PYG KL A + + + + + + F
Sbjct: 122 RIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYF 181
Query: 544 N----HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLD-------AKRDW----G 672
N HES L D + + +A + +GKL+ L++ D RD+
Sbjct: 182 NPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVD 241
Query: 673 FAKEYVDGMWRMLQADEPDTFVLATNR----TETVRDFVSLAASAVDIQLEWKGQAEREC 840
A+ ++ + + + D T L T R E VR F + AV +L +
Sbjct: 242 LARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVAR------- 294
Query: 841 GVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
RP +V NPA A +GW+ + LE +C
Sbjct: 295 ------------------RPGDVAECYANPAAAAETIGWKAERDLERMC 325
>gi|4406251|gb|AAD19915.1| (AF105113) dTDP-glucose-4,6-dehydratase
[Streptococcus pneumoniae]
Length = 348
Score = 56.2 bits (133), Expect = 4e-07
Identities = 62/266 (23%), Positives = 115/266 (42%), Gaps = 15/266 (5%)
Frame = +1
Query: 175 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAALVDKLAAEADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 352 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 495
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGLGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 496 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 672
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 673 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 849
++ G+W +L + +T+++ + + ++ + L + + G D
Sbjct: 229 HTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADAYDHVTDRAGHD 288
Query: 850 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 972
+ + +K R +LGW+P+ T
Sbjct: 289 LRYAI--------------------DASKLRDELGWKPEFT 309
>gi|1001273|dbj|BAA10518| (D64003) dTDP-glucose 4,6-dehydratase
[Synechocystis sp.]
Length = 342
Score = 56.2 bits (133), Expect = 4e-07
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 11/273 (4%)
Frame = +1
Query: 160 PKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLE 339
P V+ D+ D +LL + + + AA+S V S P VG LLE
Sbjct: 54 PNFRFVQGDIGDRHLVDQLLREEQIETIAHFAAESHVDRSILGPGAFVQTNVVGTFTLLE 113
Query: 340 AIRIV-----NP-KIRFYQASTSEMFGKVQQTPQ----IEETPFYPRSPYGIAKLYAHWM 489
A R NP + RF ST E++G + TP E TP+ P SPY +K + +
Sbjct: 114 AFREHWQRRGNPAQFRFLHVSTDEVYGSL--TPNEPGFSETTPYSPNSPYSASKAGSDHL 171
Query: 490 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 669
Y +YG+ N+ P + + + + + +++ KL V G+ RDW
Sbjct: 172 VRAYFHTYGLPTLITNCSNNYGPYQFPEKLIPLM--CLNILRGEKLPV--YGDGQNVRDW 227
Query: 670 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 846
+ ++ + +L QA T+ + N + V + +D E
Sbjct: 228 LYVTDHCQALDLVLHQALPGATYNIGGNNEVKNIELVEILCDLMD-----------ELAP 276
Query: 847 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
D+ I+ RP + +K + +LGWEPK T+E
Sbjct: 277 DLPVKPARQLISYVTDRPGHDRRYAIDASKIKRELGWEPKVTVE 320
>gi|2959983|emb|CAA10917.1| (AJ222661) UDP-glucuronic acid epimerase
[Sinorhizobium meliloti]
Length = 341
Score = 56.2 bits (133), Expect = 4e-07
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFW-RINELGIAQHPK-LHLVEYDLT 192
+ITG G G ++A+ L++ G+ V G + + + I Q V L
Sbjct: 4 LITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLE 63
Query: 193 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 372
D ++ R ELA P+ + +LAAQ+ V S + P D VG+ N+LE + + PK
Sbjct: 64 DRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPK-HL 122
Query: 373 YQASTSEMFGKVQQTPQIE-ETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 549
ASTS ++G ++ P E + P + Y K M +Y Y + + F
Sbjct: 123 MLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAHLYKVPTTAFRFFTV 182
Query: 550 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
P D K AI + +D+ G + RD+ + + V+ + R+
Sbjct: 183 YGPWGRPDMALFKFVDAIHNGR--PIDIYGEGRM--SRDFTYIDDLVESIVRL 231
>gi|2804685 (AF030359) dTDP-glucose-4,6-dehydratase [Streptococcus
pneumoniae] >gi|2804710 (AF030363)
dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae]
>gi|2804723 (AF030365) dTDP-glucose-4,6-dehydratase
[Streptococcus pneumoniae] >gi|2804729 (AF030366)
dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae]
>gi|3320401 (AF030373) dTDP-glucose-4,6-dehydratase
[Streptococcus pneumoniae] >gi|3818498 (AF057294)
Cps23fQ [Streptococcus pneumoniae]
>gi|4200435|gb|AAD10183.1| (AF026471) Cps2N
[Streptococcus pneumoniae]
Length = 349
Score = 56.2 bits (133), Expect = 4e-07
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 15/266 (5%)
Frame = +1
Query: 175 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 352 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 495
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 496 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 672
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 673 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 849
++ G+W +L + +T+++ + + ++ + L L+ GQA
Sbjct: 229 HTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELI-------LKEMGQA------- 274
Query: 850 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 972
A VT +D +K R +LGW+P+ T
Sbjct: 275 -ADAYDHVTDRAGHDLRYAID-----ASKLRDELGWKPEFT 309
>gi|2804691 (AF030360) dTDP-glucose-4,6-dehydratase [Streptococcus
pneumoniae] >gi|2804697 (AF030361)
dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae]
>gi|2804704 (AF030362) dTDP-glucose-4,6-dehydratase
[Streptococcus pneumoniae] >gi|2804716 (AF030364)
dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae]
Length = 349
Score = 56.2 bits (133), Expect = 4e-07
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 15/266 (5%)
Frame = +1
Query: 175 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 352 VNPKIRFYQASTSEMFGKVQQTPQI------------EETPFYPRSPYGIAKLYAHWMTV 495
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLLGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 496 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 672
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 673 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 849
++ G+W +L + +T+++ + + ++ + L L+ GQA
Sbjct: 229 HTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELI-------LKEMGQA------- 274
Query: 850 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 972
A VT +D +K R +LGW+P+ T
Sbjct: 275 -ADAYDHVTDRAGHDLRYAID-----ASKLRDELGWKPEFT 309
>gi|5104852|dbj|BAA80166.1| (AP000061) 330aa long hypothetical
dTDP-glucose 4,6-dehydratase [Aeropyrum pernix]
Length = 330
Score = 56.2 bits (133), Expect = 4e-07
Identities = 70/266 (26%), Positives = 108/266 (40%), Gaps = 3/266 (1%)
Frame = +1
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 363
D+ D R+L P V N AA++ V S ++P +G +LEAIR +
Sbjct: 56 DIADEEQFGRVLTEFEPDVVVNFAAETHVDRSINEPAPFMRTNIIGVFTILEAIRKRIDQ 115
Query: 364 IRFYQASTSEMFGKVQQTPQ--IEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 537
I ST E++G + T + E P P SPY +K + Y +YG+
Sbjct: 116 IVLLHVSTDEVYGDLWNTGKEATESDPLNPSSPYSASKASGDLLIKAYGRTYGLKYRIVR 175
Query: 538 LFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQA 717
N+ P + V + I I I GK V+ G+ RDW + ++ + +L+
Sbjct: 176 PCNNYGPYQ---HVEKLIPRTIIRILHGKPPVI-YGDGSQIRDWLYVEDTARAIHVVLEK 231
Query: 718 D-EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 894
+ + + + TV+D V V+I LE G+ + GK+
Sbjct: 232 GVDGEIYNVCGGMASTVKDIV------VNI-LESMGKPRDY----LVYGKS--------- 271
Query: 895 RPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
RP E D LGW P TL+E
Sbjct: 272 RPGE-DRRYAMKCDKIRNLGWAPHVTLKE 299
>gi|2105060|emb|CAB08849| (Z95436) rmlB2 [Mycobacterium
tuberculosis]
Length = 314
Score = 55.8 bits (132), Expect = 6e-07
Identities = 66/261 (25%), Positives = 101/261 (38%), Gaps = 4/261 (1%)
Frame = +1
Query: 16 AVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
A++TG G G+ L LL G+ V G + + N + + + +V DL
Sbjct: 3 ALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTADL 62
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
+LE P+ V++LAAQ V S P + +G V L EA R +
Sbjct: 63 H------AILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKI 116
Query: 370 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 549
+ +S ++G + P E P P SPY K+ +R YG+ + N
Sbjct: 117 VHTSSGGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANV 176
Query: 550 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 729
P R + A L G+ RD+ F + VD R + AD
Sbjct: 177 YGP-RQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVR-VSADVGG 234
Query: 730 --TFVLATNRTETVRDFVSLAASAV 798
F + T + + R S A+AV
Sbjct: 235 GLRFNIGTGKETSDRQLHSAVAAAV 259
>gi|2583123|gb|AAB82632.1| (AC002387) putative nucleotide sugar
epimerase [Arabidopsis thaliana]
Length = 437
Score = 55.8 bits (132), Expect = 6e-07
Identities = 73/322 (22%), Positives = 128/322 (39%), Gaps = 3/322 (0%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-FWRINELGIAQHPKLHLVEYDL 189
+ ++TG G G +++ L G V G + + + + + + +VE D+
Sbjct: 98 TVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDI 157
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
D+ +L ++ + V +LAAQ+ V + + P + G VNLLE + VNP+
Sbjct: 158 NDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPA 217
Query: 370 FYQASTSEMFGKVQQTPQIE-ETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 546
AS+S ++G + P E + P S Y K + Y YG+ F
Sbjct: 218 IVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 277
Query: 547 HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNL-DAKRDWGFAKEYVDGMWRMLQADE 723
P D T I +K + + + N RD+ + + V G L E
Sbjct: 278 VYGPWGRPDMAYFFFTKDI--LKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAE 335
Query: 724 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 903
T R +L ++ + ER+ + V + K L+ K R
Sbjct: 336 KSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQ--LKVKAKKNLI----KMPRNG 389
Query: 904 EVDLLIGNPAKARTKLGWEPKTTLE 978
+V N + A+ +LG++P T L+
Sbjct: 390 DVPFTHANISLAQRELGYKPTTDLQ 414
>gi|1881546 (U09239) dTDP-glucose-4,6-dehydratase [Streptococcus
pneumoniae]
Length = 349
Score = 55.4 bits (131), Expect = 7e-07
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 15/266 (5%)
Frame = +1
Query: 175 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 352 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 495
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 496 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 672
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 673 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 849
++ G+W +L + +T+++ + + ++ + L L+ GQA
Sbjct: 229 HTNDHSSGVWIILTKGQIGETYLIGADGEKNNKEVLELI-------LKEMGQA------- 274
Query: 850 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 972
A VT +D +K R +LGW+P+ T
Sbjct: 275 -ADAYDHVTDRAGHDLRYAID-----ASKLRDELGWKPEFT 309
>gi|3907612|gb|AAC78676.1| (AF094575) dTDP-glucose-4,6-dehydratase
Cps19aN [Streptococcus pneumoniae]
Length = 349
Score = 55.4 bits (131), Expect = 7e-07
Identities = 62/266 (23%), Positives = 115/266 (42%), Gaps = 15/266 (5%)
Frame = +1
Query: 175 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 352 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 495
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 496 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 672
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 673 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 849
++ G+W +L + +T+++ + + ++ + L + + G D
Sbjct: 229 HTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQATDAYDHVTDRAGHD 288
Query: 850 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 972
+ + +K R +LGW+P+ T
Sbjct: 289 LRYAI--------------------DASKLREELGWKPEFT 309
>gi|2326949 (U43540) rhamnose biosynthesis protein [Mycobacterium
tuberculosis] >gi|2326950 (U43540) rfbA gene product
[Mycobacterium tuberculosis]
Length = 329
Score = 55.4 bits (131), Expect = 7e-07
Identities = 50/182 (27%), Positives = 84/182 (45%), Gaps = 5/182 (2%)
Frame = +1
Query: 166 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
+ LV+ D+TD +L+ A V + AA+S V + D P +G +LEA+
Sbjct: 51 IRLVQGDITDAELVSQLV--AESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAV 108
Query: 346 RIVNPKIRFYQASTSEMFGKVQQTPQ---IEETPFYPRSPYGIAKLYAHWMTVNYRESYG 516
R +R + ST E++G ++ + E TP+ P SPY K A + + S
Sbjct: 109 R--RHGVRLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSLC 166
Query: 517 IFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAKEYV 690
+ A N+ P + F+ R+IT+ + +LKL G+ RDW ++
Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNCLT-------GLLKLYGDGGNVRDWIHVDDHN 219
Query: 691 DGMWRML 711
+ R+L
Sbjct: 220 SAVRRIL 226
>gi|1651976|dbj|BAA16902| (D90901) CDP-glucose 4,6-dehydratase
[Synechocystis sp.]
Length = 360
Score = 55.0 bits (130), Expect = 1e-06
Identities = 81/330 (24%), Positives = 135/330 (40%), Gaps = 8/330 (2%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYG-TYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
KS +TG TG G++L L ++G V G + ++ N + E+ D
Sbjct: 10 KSVFLTGHTGFKGSWLTLWLSQLGAKVSGYSLDPLTNPNLCELAEIAKCLRSDTRA---D 66
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ DL++ + + A P+ V++LAAQ V S+ P+ T +G +LLEA+R +
Sbjct: 67 VNDLANLQKAIAEARPEIVFHLAAQPLVRRSYRDPVGTFATNVMGTAHLLEALRASDSVR 126
Query: 367 RFYQASTSEMFGKVQQT-PQIEETPFYPRSPYGIAKLYAHWMTVNYRESY----GIFAAS 531
+T +++ V+ P E+ PY +K + +YR+++ G+ AS
Sbjct: 127 VVVIVTTDKVYRNVEWCWPYREDDQLGGHDPYSASKAACEIVVASYRDAFLREQGVAVAS 186
Query: 532 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
N + D+ ++ + K V+ + A R W E + G +
Sbjct: 187 ARAGN---VIGGGDWSEDRLIPDVVRALDAKTMVI-IRRPQAIRPWQHVLEPLAGYLLLA 242
Query: 712 QA--DEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 885
Q P+ A N +D A+ V LE+ + E V+ G
Sbjct: 243 QKLWHSPE-LAGAYNLGPETKD-----AATVRQILEFASRIEPGLQVEYGDGNE------ 290
Query: 886 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMM 999
P E L AKART LG+ P +EE M
Sbjct: 291 ---GPHEAGWLSLEIAKARTLLGYRPSWGVEEAVRRTM 325
>gi|2983546 (AE000721) UDP-glucose-4-epimerase [Aquifex aeolicus]
Length = 327
Score = 55.0 bits (130), Expect = 1e-06
Identities = 46/154 (29%), Positives = 72/154 (45%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
K ++TG G G+++ + L E GY V Y S+ N W + + KL V+ DL
Sbjct: 2 KKVLVTGGAGYIGSHVVKALGEKGYEVL-IYDNLSTGNEWAV------LYGKL--VKADL 52
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
D + R+ E P V + AA V S +PL V +NLLE ++ +
Sbjct: 53 ADKETLRRVFEEFKPDAVMHFAAYIVVPESVKEPLKYYRNNVVNTINLLEVMQEFGVN-K 111
Query: 370 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAK 471
F +S++ ++G + P E+ P P +PYG K
Sbjct: 112 FVFSSSAAVYGIPESIPVKEDAPLNPINPYGETK 145
>gi|1169830|sp|P13226|GALE_STRLI UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
Length = 329
Score = 55.0 bits (130), Expect = 1e-06
Identities = 74/315 (23%), Positives = 123/315 (38%), Gaps = 3/315 (0%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
++TG G G+ +AQ L+E G V + S+ G+ + + D
Sbjct: 6 LVTGGAGYVGSVVAQHLVEAGNEVVVLHNLSTGFR------AGVPAGASFYRGDIRDQDF 59
Query: 199 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 378
V L+ V + AA S VG S +P D G + LLEA+R + R
Sbjct: 60 MRKVFRGRLSFDG-VLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAGVR-RLVF 117
Query: 379 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHESP 558
+ST+ +G+ +Q P +E P P +PYG +KL M ++G+ A S FN
Sbjct: 118 SSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSVPYFNVAGA 177
Query: 559 LRARDFVTRKITHAIAM---IKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 729
R V +H I + + G+ + + + D ++Y+ AD +
Sbjct: 178 NRGVRLVHDPESHLIPLVLQVAQGRREAISVYGDDYPTPDTCVRDYIH------VADLAE 231
Query: 730 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 909
+LA R + + + + R +G + I R +
Sbjct: 232 AHLLAVRRRPGNEHLICNLGNGNGFSVREVVETVRR-----VTGHPIPEIMAP-RRGRDP 285
Query: 910 DLLIGNPAKARTKLGWEP 963
+L+ + AR KLGW P
Sbjct: 286 AVLVASAGTAREKLGWNP 303
>gi|132499|sp|P26391|RFBB_SALTY DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|96840|pir||S15299 rfbB protein - Salmonella
typhimurium >gi|581654|emb|CAA40115| (X56793)
dTDP-glucose 4,6-dehydratase [Salmonella enterica]
Length = 361
Score = 55.0 bits (130), Expect = 1e-06
Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 19/277 (6%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
I++ + + D+ D + R+ E P V +LAA+S V S P + VG
Sbjct: 46 ISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTY 105
Query: 328 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQIEE----------TPFYPRS 453
LLE R RF+ ST E++G + ++E T + P S
Sbjct: 106 ALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSS 165
Query: 454 PYGIAKLYAHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDV 633
PY +K + + +R +YG+ N+ P K+ + + L +
Sbjct: 166 PYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH----FPEKLIPLVILNALEGKPL 221
Query: 634 LKLGNLDAKRDWGFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQL 810
G D RDW + +++ + ++ + +T+ + + + D V +D ++
Sbjct: 222 PIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLD-EI 280
Query: 811 EWKGQAERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
K + RE T V P R +D K +LGW+P T E
Sbjct: 281 VPKATSYRE-------QITYVADRPGHDRRYAID-----AGKISRELGWKPLETFE 324
>gi|4981151|gb|AAD35714.1|AE001737_7 (AE001737) nucleotide sugar
epimerase, putative [Thermotoga maritima]
Length = 346
Score = 54.7 bits (129), Expect = 1e-06
Identities = 67/253 (26%), Positives = 103/253 (40%), Gaps = 5/253 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
K ++TG G G+ L + LL++G V SS W + + P L +E D+
Sbjct: 14 KRVLVTGGAGAVGSNLVRRLLDLGAFVIVIDNLSSGYT-WLLPQ----DAPNLLFIEGDI 68
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
T+ R+ P+ +++LAA S D P + G G + LLE RI R
Sbjct: 69 TNDVDLKRVFN-EEPEIIFHLAAFFANQNSVDYPEKDLWVNGFGTLKLLEYTRIYGKVER 127
Query: 370 F-YQASTSEMFGKVQQTPQIEETPF--YPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
F Y +S ++ P E+ P + +PY I K + + Y I
Sbjct: 128 FVYASSGCSIYPSDAPMPFKEDLPISSWMSTPYQITKALGELYCNYFYKMYDIPITKARF 187
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FN P I + I LGK + G + RD+ + + VDG+ RM
Sbjct: 188 FNSFGPGEVPGQYRNVIPNFIYWAMLGK-PLPITGTGEETRDFTYVGDIVDGLLRMGYYR 246
Query: 721 EP--DTFVLATNRTETVR 768
E + F LA R ++
Sbjct: 247 EAIGEAFNLAAGREVKIK 264
>gi|1944622|emb|CAB05932| (Z83335) dTDP-glucose 4,6-dehydratase
[Streptococcus pneumoniae]
Length = 349
Score = 54.3 bits (128), Expect = 2e-06
Identities = 62/270 (22%), Positives = 113/270 (40%), Gaps = 14/270 (5%)
Frame = +1
Query: 163 KLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEA 342
++ LV D+ D +L+ A + + AA+S S + P +G LLEA
Sbjct: 55 RVELVVGDIADAELVDKLV--AQADAIVHYAAESHNDNSLNDPSPFIHTNFIGIYTLLEA 112
Query: 343 IRIVNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHW 486
R + IRF+ ST E++G + + ET + P SPY K +
Sbjct: 113 ARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170
Query: 487 MTVNYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKR 663
+ + S+G+ A N+ P + F+ R+IT+ ++ IK KL G R
Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVR 225
Query: 664 DWGFAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAEREC 840
DW ++ G+W +L + +T+++ + + ++ + L + +
Sbjct: 226 DWIHTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQATDAYDHVTDRA 285
Query: 841 GVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 972
G D+ + +K R +LGW+P+ T
Sbjct: 286 GHDLRYAI--------------------DASKLRDELGWKPEFT 309
>gi|6460562|gb|AAF12268.1|AE001862_94 (AE001862) thymidine
diphosphoglucose 4,6-dehydratase [Deinococcus
radiodurans]
Length = 364
Score = 54.3 bits (128), Expect = 2e-06
Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLL----EMGYVVYG--TY--RRSSSLNFWRINELGIAQHPK 165
KS ++TG G G+ + L E VVY TY R+ + + W +P
Sbjct: 14 KSLLVTGGCGFIGSNFVRYWLGQHPESKVVVYDKLTYAGRKENLHDLW--------DNPA 65
Query: 166 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
L LV D+ D+ R + + N AA++ V S PL T+ G LLE
Sbjct: 66 LSLVVGDIGDMDLVRRTCQENDVDLIVNFAAETHVDQSILGPLVFTETNVRGTHVLLEVA 125
Query: 346 RIVNPKIRFYQASTSEMFGKVQQTPQIEETP-FYPRSPYGIAKLYAHWMTVNYRESYGI 519
R + IR + ST E++G ++ Q ET PRSPY +K A + Y +YGI
Sbjct: 126 RELG--IRLHHISTDEVYGHIKDGHQSVETDELAPRSPYAASKAAADQLVQAYAITYGI 182
>gi|549563|sp|P35675|YGAE_ERWAM HYPOTHETICAL PROTEIN IN GALE
3'REGION >gi|1073272|pir||B36951 hypothetical protein
(galE 3' region) - Erwinia amylovora (fragment)
>gi|429079|emb|CAA53768| (X76172) unidentified ORF
[Erwinia amylovora]
Length = 164
Score = 54.3 bits (128), Expect = 2e-06
Identities = 37/108 (34%), Positives = 54/108 (49%), Gaps = 10/108 (9%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
I+ +P+ H + D+ D S R P V +LAA+S V S D P + +G
Sbjct: 46 ISDNPRDHFSKTDICDSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNMIGTY 105
Query: 328 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAK 471
LLEA R+ R + ST E+FG + T + E+T + P SPY +K
Sbjct: 106 VLLEAARMYWLGLPVERKEAFRLHHISTDEVFGDLHGTEDLFTEQTAYAPSSPYSASK 163
>gi|2494672|sp|P95780|RMLB_STRMU DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1813347|dbj|BAA11249| (D78182)
dTDP-glucose-4,6-dehydratase [Streptococcus mutans]
Length = 348
Score = 53.9 bits (127), Expect = 2e-06
Identities = 53/179 (29%), Positives = 85/179 (46%), Gaps = 14/179 (7%)
Frame = +1
Query: 175 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
VE + D++ S + +LAA + + + AA+S S P VG LLEA R
Sbjct: 56 VELVVGDIADSELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYTLLEAARK 115
Query: 352 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 495
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 496 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 672
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 673 FAKEYVDGMWRML 711
++ G+W +L
Sbjct: 229 HTNDHSTGVWAIL 241
>gi|3061300|dbj|BAA25656| (AB005901) deduced dNDP-hexose
4,6-dehydratase [Streptomyces kasugaensis]
Length = 329
Score = 53.9 bits (127), Expect = 2e-06
Identities = 78/322 (24%), Positives = 126/322 (38%), Gaps = 2/322 (0%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFW-RINELGIAQHPKLH-LVEY 183
+ ++TG G G++L + L+ G V RR S+ R+ L A L +V
Sbjct: 11 RQVLVTGADGFIGSHLTETLVSRGARVTAVVRRVSAAQVTHRLRNLSAATVDALERVVHV 70
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 363
DL S+V +L ++LAA ++V S DQP + +++L A + P
Sbjct: 71 DLAG-PSAVDVLGRLEADTWFHLAADAYVPASLDQPADVVRTNVMSTLHVLLAAQQRQPA 129
Query: 364 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
S+SE++G Q E P P +PY +K+ + ++ +YG+ F
Sbjct: 130 -HLLVTSSSEVYGS-QPDAITERHPLEPATPYAASKVACDRLAWSWHHTYGLPLTIVRPF 187
Query: 544 NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 723
N P D V + A+ G+ + G+ + RD F + V G + A+
Sbjct: 188 NSYGPRHVYDAVPLFLARALR----GEPITIN-GSGEQTRDLTFVADTVAGF--LALAEL 240
Query: 724 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 903
P T T T + +A + V + S +V P R
Sbjct: 241 PATGETYNIGTGTDHRIIDVARAIVAL---------------TGSQSEIVHGPP---RSG 282
Query: 904 EVDLLIGNPAKARTKLGWEPKTTL 975
EV L +PAK GW + L
Sbjct: 283 EVLKLQADPAKLTEATGWRAEYDL 306
>gi|4741795|gb|AAD28704.1|AF101047_5 (AF101047) putative
dTDP-D-glucose 4,6-dehydratase [Haemophilus ducreyi]
Length = 346
Score = 53.9 bits (127), Expect = 2e-06
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFD--QPLTTTDITGVG 321
++QH + + D+ D + P +V +LAA+S V S + P T+I +G
Sbjct: 46 VSQHKRYTFEQVDINDSGRIAEIFYHYQPDKVMHLAAESHVDRSIEGSAPFIQTNI--IG 103
Query: 322 AVNLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQ--IEETPFYPRSPYGIAK 471
LLE R + F+ ST E+FG + PQ E++ + P SPY +K
Sbjct: 104 TYTLLETARSYWQSLDQQKKAQFLFHHISTDEVFGDLAHQPQRFTEQSAYMPSSPYSASK 163
Query: 472 LYAHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNL 651
+ + + +YG+ N+ P F + I I GK + G+
Sbjct: 164 AASDHLVQAWYRTYGLPTVISHCSNNYGPYH---FPEKLIPLTILNALSGK-PLPVYGDG 219
Query: 652 DAKRDWGFAKEYVDGMWRMLQ 714
RDW F +++ ++++++
Sbjct: 220 LQVRDWLFVEDHARALYKVIK 240
>gi|1870164|emb|CAB05928| (Z83335) unknown [Streptococcus pneumoniae]
Length = 356
Score = 53.9 bits (127), Expect = 2e-06
Identities = 84/327 (25%), Positives = 148/327 (44%), Gaps = 24/327 (7%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMG--YVVYGTYRRSS----SLNFWRINELG--IAQ 156
M K+ +ITG+ G G+ L + LLE+ + G + +L +R+ +L I
Sbjct: 1 MRGKTILITGVAGFIGSNLVRKLLELEGTMTIIGLDNLNDYYDIALKDYRLLQLNKLIQD 60
Query: 157 HPKLH--LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVN 330
+P+ + ++ D+ D ++ + P+ V NLAAQ+ V S P + VG N
Sbjct: 61 YPEKNWIFIKGDIADKMLINKIFKSYHPQIVVNLAAQAGVRYSITNPDVYIESNIVGFHN 120
Query: 331 LLEAIR----IVNPKI-RFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMT 492
+LEA R I + + AS+S ++G ++ P E+ P S Y K
Sbjct: 121 VLEACRHSYEIYDGGVEHLVYASSSSVYGGNKKIPFATEDKVDNPISLYAATKKTNELQA 180
Query: 493 VNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 672
Y + Y I + F P D T + +++ GN KRD+
Sbjct: 181 YAYSKIYNIPSTGLRFFTVYGPAGRPDMAYFGFTDKLR--SGSDIEIYNHGN--CKRDFT 236
Query: 673 FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERE---CG 843
+ + V+G+ R++Q+ P V + N ++ S + L++ ++E G
Sbjct: 237 YIDDIVEGIVRVMQS-APKKLVGSDNLPLAPYKVYNIGNSKPENLLDFVDVLQQELIKAG 295
Query: 844 V-----DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
V D S K LV + +P +V + + + G++PKT+L E
Sbjct: 296 VLPENYDFDSHKKLVPM-----QPGDVPVTYADTSDLERDFGFKPKTSLRE 341
>gi|1552867|emb|CAB02463| (Z80343) epiB [Mycobacterium tuberculosis]
Length = 326
Score = 53.1 bits (125), Expect = 4e-06
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
++TG G G++L + LL G+ V T SS N R N G H + + +TD
Sbjct: 4 LVTGGAGFQGSHLTESLLANGHWV--TVLDKSSRNAVR-NMQGFRSHDRAAFISGSVTDG 60
Query: 199 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 378
+ R + V++LAA V S P + + +G +LEA+R + R
Sbjct: 61 QTIDRAVR--DHHVVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVR--RYRNRLIY 116
Query: 379 ASTSEMFG---KVQQTPQIEE-TPFYPRSPYGIAKLYAHWMTVNYRESYGI 519
ST E++G +++ +++E P SPYG +K A + +Y SYG+
Sbjct: 117 VSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGL 167
>gi|2650268 (AE001079) UDP-glucose 4-epimerase (galE-1)
[Archaeoglobus fulgidus]
Length = 305
Score = 53.1 bits (125), Expect = 4e-06
Identities = 77/325 (23%), Positives = 136/325 (41%), Gaps = 5/325 (1%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
V+TG G G+++ L E +V S + F +NE A+ K L D+ D
Sbjct: 3 VVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF--VNEA--ARLVKADLAADDIKDY 58
Query: 199 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 378
L +EV+++AA V + + P + LLEA+R R
Sbjct: 59 --------LKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVS-RIVF 109
Query: 379 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHESP 558
STS ++G+ + P E+ P +P S YG +KL + +Y ++ + A
Sbjct: 110 TSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWI--------- 160
Query: 559 LRARDFVTRKITHA-----IAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 723
R + + R+ TH I +K ++ LGN + + + + + VD M L+ DE
Sbjct: 161 YRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDE 220
Query: 724 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 903
V++ + Q++ K AE C S + T + ++
Sbjct: 221 R----------------VNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWK-G 263
Query: 904 EVDLLIGNPAKARTKLGWEPKTTLEELCHM 993
+V +++ + K + +LGW+P+ EE M
Sbjct: 264 DVPVMLLSIEKLK-RLGWKPRYNSEEAVRM 292
>gi|2494668|sp|Q57664|GALE_METJA PUTATIVE UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|2129343|pir||D64326 UDPglucose 4-epimerase (EC
5.1.3.2) - Methanococcus jannaschii >gi|1590951 (U67477)
UDP-glucose 4-epimerase (galE) [Methanococcus
jannaschii]
Length = 305
Score = 52.7 bits (124), Expect = 5e-06
Identities = 44/167 (26%), Positives = 72/167 (42%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
++TG G G+++ L+E Y V +L N + +PK V D+ D
Sbjct: 3 LVTGGAGFIGSHIVDKLIENNYDVIIL----DNLTTGNKNNI----NPKAEFVNADIRDK 54
Query: 199 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 378
++ + V + AAQ V S + P+ DI +G +N+LE +R + +
Sbjct: 55 DLDEKI-NFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFA 113
Query: 379 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 519
+S ++G+ P E P P SPYG++K Y YGI
Sbjct: 114 SSGGAVYGEPNYLPVDENHPINPLSPYGLSKYVGEEYIKLYNRLYGI 160
>gi|3193316 (AF069299) contains similarity to nucleotide sugar
epimerases [Arabidopsis thaliana]
Length = 430
Score = 52.7 bits (124), Expect = 5e-06
Identities = 78/322 (24%), Positives = 128/322 (39%), Gaps = 21/322 (6%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
S ++TG G G +++ L G V G + + R + + + + +VE D
Sbjct: 92 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQ-ALLERSGVFVVEGD 150
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D + +L E+ V +LAAQ+ V + + P + G VNLLE + NP+
Sbjct: 151 INDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQP 210
Query: 367 RFYQASTSEMFGKVQQTPQIE-ETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
AS+S ++G + P E + P S Y K + Y YG+ F
Sbjct: 211 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 270
Query: 544 NHESPLRARD----FVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
P D F TR I A + + + G + RD+ + + V G L
Sbjct: 271 TVYGPWGRPDMAYFFFTRDILKGKA---ISIFEGVNHGTV--ARDFTYIDDIVKGCLGAL 325
Query: 712 QADEPDT--------------FVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 849
E T F L V D V++ ++ K +A+R
Sbjct: 326 DTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTI------LERLLKVKAKRNI--- 376
Query: 850 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
K R +V N + A+ +LG++P T L+
Sbjct: 377 -----------MKLPRNGDVQFTHANISSAQRELGYKPTTDLQ 408
>gi|2121111|pir||I55054 dTDP-D-glucose 4,6-dehydratase - Escherichia
coli
Length = 361
Score = 52.7 bits (124), Expect = 5e-06
Identities = 65/265 (24%), Positives = 110/265 (40%), Gaps = 19/265 (7%)
Frame = +1
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 354
D+ D + R+ P V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 355 -----NPKIRFYQASTSEMFGKVQQTPQI----------EETPFYPRSPYGIAKLYAHWM 489
RF+ ST E++G + ++ E T + P SPY +K + +
Sbjct: 118 LDSDKENSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHL 177
Query: 490 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 669
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 670 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 846
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEVKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 847 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
T V P R +D K LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----AEKIGRALGWKPQETFE 324
>gi|2506451|sp|P37759|RBB1_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1736731|dbj|BAA15883| (D90841) dTDP-glucose
4,6-dehydratase (EC 4.2.1.46). [Escherichia coli]
>gi|1736744|dbj|BAA15895| (D90842) dTDP-glucose
4,6-dehydratase (EC 4.2.1.46). [Escherichia coli]
>gi|1788353 (AE000294) dTDP-glucose 4,6 dehydratase
[Escherichia coli] >gi|2665489 (U09876) dTDP-D-glucose
4,6-dehydratase [Escherichia coli]
Length = 361
Score = 52.7 bits (124), Expect = 5e-06
Identities = 65/265 (24%), Positives = 110/265 (40%), Gaps = 19/265 (7%)
Frame = +1
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 354
D+ D + R+ P V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 355 -----NPKIRFYQASTSEMFGKVQQTPQI----------EETPFYPRSPYGIAKLYAHWM 489
RF+ ST E++G + ++ E T + P SPY +K + +
Sbjct: 118 LDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHL 177
Query: 490 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 669
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 670 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 846
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 847 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
T V P R +D K LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----AEKIGRALGWKPQETFE 324
>gi|3093975 (AF059755) nucleotide sugar epimerase [Vibrio
vulnificus]
Length = 334
Score = 52.3 bits (123), Expect = 6e-06
Identities = 81/321 (25%), Positives = 135/321 (41%), Gaps = 16/321 (4%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-FWRIN----ELGIAQHPKLHLVEY 183
++TG G G+ A+ L G+ V G +LN ++ +N L ++P V
Sbjct: 4 LVTGAAGFIGSATAEKLNAAGHEVVGI----DNLNDYYDVNLKHARLARIENPLFKFVSV 59
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 363
D++D + +L V +LAAQ+ V S + P D VG +N+LE R N
Sbjct: 60 DISDRGAMEQLFATEKFDRVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR-QNKV 118
Query: 364 IRFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
AS+S ++G + P ++ +P S Y K M +Y Y I +G+
Sbjct: 119 SHLVYASSSSVYGLNAKVPFSTSDSVDHPVSLYAPTKKSNELMAHSYSHLYDI-PTTGLR 177
Query: 541 F-----NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 705
F + P A T+KI A +D+ G D RD+ + V+G+ R
Sbjct: 178 FFTVYGSWGRPDMAPFIFTKKILDGDA------IDINNNG--DMWRDFTHVDDIVEGVVR 229
Query: 706 MLQA----DEPDTFVLATNRTETVRDFVSLAASAVDIQL-EWKGQAERECGVDVASGKTL 870
+ +E T T T + V I L ++ E E G++
Sbjct: 230 IADVIPTRNESWTVEAGTPATSSAPYSVYNIGHGSPINLMDFVKAIENELGIEAKK---- 285
Query: 871 VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
N + +P +V + T G++P+ T++E
Sbjct: 286 ---NFREMQPGDVYQTYADTEDLFTATGYKPRVTVKE 319
>gi|5281036|emb|CAB45972.1| (AL080318) nucleotide sugar
epimerase-like protein [Arabidopsis thaliana]
Length = 436
Score = 51.9 bits (122), Expect = 8e-06
Identities = 46/177 (25%), Positives = 80/177 (44%), Gaps = 3/177 (1%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
+ ++TG +G G +++ L G V G + R R + G+ + + +VE D
Sbjct: 97 TVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQ-GLLERSGVFVVEGD 155
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D +L ++ V +LAAQ+ V + P + + G VNLLE + NP+
Sbjct: 156 INDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQP 215
Query: 367 RFYQASTSEMFGKVQQTPQIE-ETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
AS+S ++G + P E + P S Y K + Y YG+ + +G+ F
Sbjct: 216 AIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEGIAHTYNHIYGL-SLTGLRF 274
>gi|68391|pir||XUSMUG UDPglucose 4-epimerase (EC 5.1.3.2) -
Streptomyces sp >gi|153261 (M18953) UDP galactose
4-epimerase (EC 1.7.7.12) [Streptomyces lividans]
Length = 319
Score = 51.9 bits (122), Expect = 8e-06
Identities = 51/176 (28%), Positives = 76/176 (42%), Gaps = 1/176 (0%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-FWRINELGIAQHPKLHLVEYDLTD 195
++TG G G+ +AQ L+E G V + S+ R +HP V L+
Sbjct: 6 LVTGGAGYVGSVVAQHLVEAGNEVVVLHNLSTGFREVCRRVPRSSRRHPGRRQVRGRLSF 65
Query: 196 LSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFY 375
V + AA S VG S +P D G + LLEA+R + R
Sbjct: 66 -------------DGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAGVR-RLV 111
Query: 376 QASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 546
+ST+ +G+ +Q P +E P P +PYG +KL M ++G+ A S FN
Sbjct: 112 FSSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSVPYFN 168
>gi|3087757|emb|CAA66078| (X97448) galE [Brucella melitensis]
Length = 328
Score = 51.9 bits (122), Expect = 8e-06
Identities = 78/326 (23%), Positives = 139/326 (41%), Gaps = 20/326 (6%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPK-LHLVEY---- 183
++TG G G++ L+E G+ V +S HP+ LH +E
Sbjct: 4 LVTGGAGYIGSHTCVQLIEAGHEVVVVDNFDNS-------------HPEALHRIEKITGP 50
Query: 184 -DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
D+ ++ ++++ V + A VG S ++PL D +G + LL+A+ +
Sbjct: 51 GDIAIVALMEQMIKRHKCTAVIHFAGLKAVGESSEKPLLYYDCNVLGTLRLLQAMEVTGV 110
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI- 537
K + +S++ ++G + P E+ P +PYG KL M + S +A + +
Sbjct: 111 K-KLVFSSSATVYGVPGKLPITEDQPLSATNPYGRTKLVIEDMLRDLYNSDNSWAVAILR 169
Query: 538 LFN----HESPLRARDFVTRKITHAI-AMIKLGKLDVLKLGNLD-------AKRDWGFAK 681
FN HES L D + + AI A + G+ L + D RD+
Sbjct: 170 YFNPVGAHESGLIGEDPNDSQQSDAIIAQVATGQTVKLNIWGNDYPTPDGTGVRDYIHVN 229
Query: 682 EYVDGMWRMLQA-DEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVAS 858
+ G + L+ D+P +V S +D+ ++ + RE ++A
Sbjct: 230 DLAAGHLKALKKLDKPSA--------SSVNLGTGQGYSVLDVIKAFEHVSNREIKYEIA- 280
Query: 859 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMM 996
P+ RP + +P A+ LGW + L E+C M
Sbjct: 281 --------PR--RPGMLPECYADPGFAKKFLGWSAEKNLREMCQDM 316
>gi|1752648|emb|CAA71250| (Y10168) glucose epimerase [Bacillus
thuringiensis]
Length = 322
Score = 51.9 bits (122), Expect = 8e-06
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 10/231 (4%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE------ 180
++TG G G +L + LL + V G S+N + ++ + +H +L ++E
Sbjct: 7 LVTGAAGFIGFHLTKRLLAQNFHVIGV----DSINDYY--DVSLKKH-RLKILEKKSNFK 59
Query: 181 YDLTDLSSSVRLLELAAPKEVY---NLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
+ D+S+ L ++ + V+ NLAAQ+ V S + P + + VG VN+LEA R
Sbjct: 60 FYKIDISNKENLNQIFKEQIVHIVINLAAQAGVRYSIENPDSYVNSNLVGFVNILEACRQ 119
Query: 352 VNPKIRFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
N + Y AS+S ++G P +++ +P S Y K M Y + I
Sbjct: 120 YNVEHLIY-ASSSSVYGANTSIPFSTKDSVDHPVSLYAATKKSNELMAHTYSHLFNIPTT 178
Query: 529 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
F P D T I +I+ + V G D +RD+ + + ++G+ R+
Sbjct: 179 GLRFFTVYGPWGRPDMAYYSFTRNI-IIENNTIRVFNNG--DMRRDFTYIDDIIEGIIRL 235
Query: 709 L 711
+
Sbjct: 236 I 236
>gi|6015668|emb|CAB57495.1| (Y18930) dTDP-glucose 4,6-dehydratase
[Sulfolobus solfataricus]
Length = 310
Score = 51.5 bits (121), Expect = 1e-05
Identities = 70/321 (21%), Positives = 126/321 (38%), Gaps = 8/321 (2%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 198
+I+G G G++L + LLE G + +++L A K + D+ +
Sbjct: 6 LISGGAGFLGSHLTEALLEKGEEIT------------IVDDLSTA---KYFNIRKDVEFI 50
Query: 199 SSSVRLLELAAPKEVY-NLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFY 375
V E +V +LAA+ + P+ T +G +LE R N RF
Sbjct: 51 KKKVEEFETEKKYDVVIHLAARPSPEDYIEHPVDTALSNSLGTYKMLEIARKSNA--RFI 108
Query: 376 QASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
S+SE++G P E P RS Y +K ++ + + Y Y +
Sbjct: 109 YTSSSEVYGSASIIPTPETYWGYVNPIGIRSCYDESKRFSEALIMAYHRQYKLDTRIQRP 168
Query: 541 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 720
FN P D ++ L DV G+ + R + + ++VD +++ D
Sbjct: 169 FNVYGPGLREDGTYGRVVSRFIYQALKGEDVTVFGDGNQTRAFLYISDWVDATIKLIYKD 228
Query: 721 --EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 894
E + F + +++ + + ++ + + K+ + P
Sbjct: 229 GLEGEVFNIGSDKEIKIIELANMI-------------------IKLTGSKSRIKYLPP-- 267
Query: 895 RPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
RP + + KA+ KLGW PK +LEE
Sbjct: 268 RPDDPPRRAADITKAKEKLGWYPKISLEE 296
>gi|1666507 (U61226) RfbB [Leptospira interrogans]
>gi|5814320|gb|AAD52188.1|AF144879_27 (AF144879) unknown
[Leptospira interrogans]
Length = 349
Score = 51.5 bits (121), Expect = 1e-05
Identities = 77/323 (23%), Positives = 130/323 (39%), Gaps = 13/323 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLL----EMGYVVYG--TYRRS-SSLNFWRINELGIAQHPKL 168
K ++TG G G+ L+L E VV+ TY + SL W+ + +
Sbjct: 2 KKILVTGGAGFIGSNFVNLILNDTKEYQVVVFDKLTYAGNLRSLESWK-------KDSRF 54
Query: 169 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
V+ D+ + + + + + AA+S V S P +G LL+A R
Sbjct: 55 IFVKADIANKEEVSSIFQEHKFNYIAHFAAESHVDRSISGPEEFIKTNVLGTFYLLDAAR 114
Query: 349 IV----NPKIRFYQASTSEMFGKVQQTPQI-EETPFYPRSPYGIAKLYAHWMTVNYRESY 513
+ +F ST E+FG + + EETP+ P SPY +K + + +Y +Y
Sbjct: 115 LQWNGSYEGKKFLHVSTDEVFGTLGDSGYFTEETPYAPNSPYSASKASSDHIVRSYYHTY 174
Query: 514 GIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVD 693
+ + N+ P F + I I GK + G+ RDW + K++ +
Sbjct: 175 HMPVVTTNCSNNYGPYH---FPEKLIPLMILNCLQGK-PLPVYGDGKNIRDWLYVKDHCE 230
Query: 694 GM-WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTL 870
+ + Q +T+ + T + D V S +D +L G + V
Sbjct: 231 ALRVALFQGLPGETYNIGTRNEKKNIDIVDSICSIMD-ELHPSGAPHSKLIQYVKD---- 285
Query: 871 VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
RP +P+K +LGW+PK E
Sbjct: 286 --------RPGHDFRYAIDPSKIEKELGWKPKFAFE 313
>gi|3608396 (AF071085) putative dTDP-glucose-4,6-dehydratase
[Enterococcus faecalis]
Length = 342
Score = 51.2 bits (120), Expect = 1e-05
Identities = 64/270 (23%), Positives = 115/270 (41%), Gaps = 14/270 (5%)
Frame = +1
Query: 163 KLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEA 342
++ LV D+ D RL+ A V + A +S S + P +G L+EA
Sbjct: 52 RVELVVGDIVDAELVNRLV--AETDAVVHYAXESHNDNSLNDPFPFVQTNLIGTYTLIEA 109
Query: 343 IRIVNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHW 486
R N +R++ ST E++G + + ETP+ P SPY K +
Sbjct: 110 CRKNN--VRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDL 167
Query: 487 MTVNYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKR 663
+ + S+ + A N+ P + F+ R+IT+ ++ I KL G R
Sbjct: 168 LVKAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGIT-PKL----YGAGKNVR 222
Query: 664 DWGFAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAEREC 840
DW ++ +W +L + +T+++ + E + + +++ LE GQ
Sbjct: 223 DWIHTNDHSSAVWAILTKGQIGETYLIGADGEEDNK-------TVMELILELMGQP---- 271
Query: 841 GVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 972
VD +N + + + + R +LGWEP+ T
Sbjct: 272 -VDAYEH-----VNDRVGHDLRYAI---DSTRLREELGWEPEFT 306
>gi|2506452|sp|P37777|RFBB_SHIFL DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1073703|pir||B55213 rfbB protein - Shigella flexneri
(strain 2a) >gi|294896 (L14842) dTDP-D-glucose
4,6-dehydratase [Shigella flexneri]
Length = 361
Score = 51.2 bits (120), Expect = 1e-05
Identities = 65/265 (24%), Positives = 110/265 (40%), Gaps = 19/265 (7%)
Frame = +1
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 354
D+ D + R+ P V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 355 -----NPKIRFYQASTSEMFGKVQQTPQ----------IEETPFYPRSPYGIAKLYAHWM 489
RF+ ST E++G + + E T + P SPY +K + +
Sbjct: 118 LNDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHL 177
Query: 490 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 669
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 670 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 846
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 847 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
T V P R +D K +LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----ADKISRELGWKPQETFE 324
>gi|2146021|pir||S49054 dTDPglucose 4,6-dehydratase (EC 4.2.1.46) -
Streptomyces fradiae (strain T59235) >gi|473600 (U08223)
dTDP-glucose dehydratase [Streptomyces fradiae]
Length = 333
Score = 50.8 bits (119), Expect = 2e-05
Identities = 70/278 (25%), Positives = 103/278 (36%), Gaps = 1/278 (0%)
Frame = +1
Query: 148 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 327
+A HP L V D+ D RL+E V + AA+S V S + G
Sbjct: 51 VAGHPDLEFVRGDIADHGWWRRLMEGVGL--VVHFAAESHVDRSIESSEAFVRTNVEGTR 108
Query: 328 NLLEAIRIVNPKI-RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYR 504
LL+A V+ + RF ST E++G + + E+ P P SPY K + + + Y
Sbjct: 109 VLLQAA--VDAGVGRFVHISTDEVYGSIAEGSWPEDHPVAPNSPYAATKAASDLLALAYH 166
Query: 505 ESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKE 684
+YG+ N+ P + + T + L L V G+ R+W +
Sbjct: 167 RTYGLDVRVTRCSNNYGPRQYPEKAVPLFTTNL----LDGLPVPLYGDGGNTREWLHVDD 222
Query: 685 YVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGK 864
+ G+ + P TE A D LE CG D S
Sbjct: 223 HCRGVALVGAGGRPGVIYNIGGGTELTN------AELTDRILEL-------CGAD-RSAL 268
Query: 865 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
V P R VD K R +LG+ P+T + E
Sbjct: 269 RRVADRPGHDRRYSVD-----TTKIREELGYAPRTGITE 302
>gi|4836876|gb|AAD30579.1|AC007260_10 (AC007260) Similar to
dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana]
Length = 669
Score = 50.8 bits (119), Expect = 2e-05
Identities = 44/170 (25%), Positives = 70/170 (40%), Gaps = 4/170 (2%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH-PKLHLVEYD 186
K+ +ITG G +++A L+ Y Y + L ++H P V+ D
Sbjct: 7 KNILITGAAGFIASHVANRLIR-SYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGD 65
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ LL + + AAQ+ V SF T G LLEA ++
Sbjct: 66 IASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 367 RFYQASTSEMFGKVQQTPQI---EETPFYPRSPYGIAKLYAHWMTVNYRESYGI 519
RF ST E++G+ + + E + P +PY K A + + Y SYG+
Sbjct: 126 RFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
>gi|5459017|emb|CAB50503.1| (AJ248288) UDP-glucose 4-epimerase
(galE-2) [Pyrococcus abyssi]
Length = 317
Score = 50.4 bits (118), Expect = 2e-05
Identities = 75/316 (23%), Positives = 132/316 (41%), Gaps = 14/316 (4%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSS----SLNFWRINELGIAQHPKLHLVEYD 186
++TG G G++L L+E GY V S+ +LN W NE + D
Sbjct: 4 LVTGGAGFIGSHLVDRLMEDGYEVRVLDDLSAGSLENLNRWLENE-------NFEFIRGD 56
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D ++ + V++LAA V +S P + + NLL+AIR N K
Sbjct: 57 MRDYKIVKEAVDDV--EVVFHLAANPEVRISSQSPELLYETNVLITYNLLQAIRESNVKF 114
Query: 367 RFYQASTSEMFGKVQQTPQIEE-TPFYPRSPYGIAKLYAHWMTVNYRESYG----IFAAS 531
+ S+S ++G P E P P S YG AKL A + Y +G IF +
Sbjct: 115 LVF-TSSSTVYGDANVLPTPESYGPLEPISVYGGAKLAAEALISGYAHIFGFRALIFRLA 173
Query: 532 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
I+ + DF+ + +K ++ LG+ ++ + + ++G+ +
Sbjct: 174 NIIGKRSNHGVIYDFINK--------LKRNPNELEILGDGKQRKSYLHVSDTINGILHIF 225
Query: 712 QADEP-----DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVT 876
+ + D + L TV++ + + + + ++K GVD G
Sbjct: 226 EYFKRQNKIFDVYNLGNEDWITVKEIAEIVSEEMGLSPKFKFTG----GVDGGRG----- 276
Query: 877 INPKFYRPAEVDLLIGNPAKARTKLGWEPK 966
+V ++ + KA+ K GW PK
Sbjct: 277 ------WKGDVKFMLLSIEKAK-KTGWRPK 299
>gi|6598832|gb|AAF18687.1|AC010795_2 (AC010795) putative UDP-glucose
4-epimerase [Arabidopsis thaliana]
Length = 351
Score = 50.4 bits (118), Expect = 2e-05
Identities = 74/326 (22%), Positives = 137/326 (41%), Gaps = 15/326 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL--NFWRINEL-GIAQHPKLHLVE 180
++ ++TG G G + LL G+ V +S+ R+ EL G KL
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNL 66
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
DL + +L V + A VG S P D VG +NL E + N
Sbjct: 67 GDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNC 126
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
K+ + +S + ++G+ + P +E+ +PYG KL+ + + + + IL
Sbjct: 127 KMMVFSSSAT-VYGQPEIVPCVEDFELQAMNPYGRTKLFLEEIARDIHAAEPEWKI--IL 183
Query: 541 FNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLD-AKRDWGFAKEYV 690
+ +P+ A + + + I + +G+L L + D D ++Y+
Sbjct: 184 LRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDYI 243
Query: 691 DGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQL-EWKGQAERECGVDVASGKT 867
M D D V A N+ + + +A ++ + E + ASGK
Sbjct: 244 HVM------DLADGHVAALNKLFSDS---KIGCTAYNLGTGQGTSVLEMVSSFEKASGKK 294
Query: 868 L-VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
+ + + P+ R + + + KA +LGW+ K ++E+C
Sbjct: 295 IPIKLCPR--RAGDATAVYASTQKAEKELGWKAKYGVDEMC 333
>gi|3021355|emb|CAA06338.1| (AJ005081) UDP-galactose 4-epimerase
[Cyamopsis tetragonoloba]
Length = 354
Score = 50.4 bits (118), Expect = 2e-05
Identities = 72/326 (22%), Positives = 142/326 (43%), Gaps = 15/326 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL--NFWRINEL-GIAQHPKLHLVE 180
++ ++TG G G++ LL+ G+ V +S+ R+ L G LH
Sbjct: 10 ETILVTGGAGFIGSHTVVQLLKQGFHVSIIDNLYNSVIDAVHRVRLLVGPLLSSNLHFHH 69
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
DL ++ L V + A VG S P D V +NL + + N
Sbjct: 70 GDLRNIHDLDILFSKTKFDAVIHFAGLKGVGESVLNPSNYYDNNLVATINLFQVMSKFNC 129
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
K + +S++ ++G+ Q P +E++ + +PYG +KL+ + + + + + IL
Sbjct: 130 K-KLVISSSATVYGQPDQIPCVEDSNLHAMNPYGRSKLFVEEVARDIQRAEAEWRI--IL 186
Query: 541 FNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAKEYV 690
+ +P+ A + + + I + + +L L + G+ +D ++Y+
Sbjct: 187 LRYFNPVGAHESGQIGEDPRGLPNNLMPYIQQVAVARLPELNIYGHDYPTKDGTAIRDYI 246
Query: 691 DGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQL-EWKGQAERECGVDVASGKT 867
M D D + A + T ++ +A ++ E + ASGK
Sbjct: 247 HVM------DLADGHIAALRKLFTTD---NIGCTAYNLGTGRGTSVLEMVAAFEKASGKK 297
Query: 868 L-VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
+ + + P+ RP + + + KA +LGW+ K +EE+C
Sbjct: 298 IPIKMCPR--RPGDATAVYASTEKAEKELGWKAKYGVEEMC 336
>gi|465550|sp|Q04871|YCL2_ECOLI HYPOTHETICAL 37.6 KD PROTEIN IN CLD
5'REGION (ORF2) >gi|485527|pir||S33669 hypothetical
protein (cld 5' region) - Escherichia coli
>gi|41111|emb|CAA78940| (Z17241) hypothetical protein
[Escherichia coli]
Length = 334
Score = 50.4 bits (118), Expect = 2e-05
Identities = 55/230 (23%), Positives = 93/230 (39%), Gaps = 2/230 (0%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNF-WRINELGIAQHPKLHLVEYDLTD 195
++TG G G ++++ LLE G+ V G + + + L + P + DL D
Sbjct: 4 LVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKIDLAD 63
Query: 196 LSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFY 375
L + V+ + V S + P D G +N+LE R N
Sbjct: 64 REGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCR-HNKIQHLL 122
Query: 376 QASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHE 552
AS+S ++G ++ P +++ +P S Y K M Y YG+ A F
Sbjct: 123 YASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPATGLRFFTVY 182
Query: 553 SPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
P D K T AM++ +DV G + KRD+ + + + + R+
Sbjct: 183 GPWGRPDMALFKFTK--AMLEGKSIDVYNYGKM--KRDFTYIDDIAEAIIRL 230
>gi|2558973 (AF025396) DdhB [Vibrio anguillarum]
Length = 360
Score = 50.0 bits (117), Expect = 3e-05
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYG-TYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
K ITG TG G +L+ L EMG +V G + ++ + + ++ + E D
Sbjct: 9 KKVFITGHTGFKGGWLSLWLQEMGAIVKGYSLPAPTTPSLFEQGKVWAGMRTE----EGD 64
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D + + + P+ V+++AAQ V +S+ +P+ T +G V LLEA++ V
Sbjct: 65 IRDFTHMRQSMYEFKPEIVFHMAAQPLVRLSYHEPIETYSTNVMGTVYLLEAVKQVGGVK 124
Query: 367 RFYQASTSEMFGKVQQT-PQIEETPFYPRSPYGIAKLYAHWMTVNYRESY 513
++ + + + E+ P PY +K A + +YR+S+
Sbjct: 125 AVVNITSDKCYENREWVWGYREDEPMGGYDPYSNSKGCAELVASSYRQSF 174
>gi|3256770|dbj|BAA29453| (AP000002) 318aa long hypothetical
UDP-glucose 4-epimerase [Pyrococcus horikoshii]
Length = 318
Score = 50.0 bits (117), Expect = 3e-05
Identities = 69/316 (21%), Positives = 138/316 (42%), Gaps = 15/316 (4%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL-GIAQHPKLHLVEYDLTD 195
++TG G G++L L+E GY V R L+ + + G + ++ D+ D
Sbjct: 4 LVTGGAGFIGSHLVDRLMEEGYKV----RVLDDLSAGSLKNIEGWLGNENFEFIKGDMRD 59
Query: 196 L---SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ S +V+ ++ V++LAA V + P + + NLL A+R K
Sbjct: 60 VEIVSKAVKDVDA-----VFHLAANPEVRIGSQSPELLYETNVLITYNLLNAVRNSGVKY 114
Query: 367 RFYQASTSEMFGKVQQTPQIEE-TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
+ S+S ++G + P E+ P P S YG AKL A + Y ++ A
Sbjct: 115 LVF-TSSSTVYGDAKVIPTPEDYAPLEPISVYGAAKLAAEALISGYAHTFDFRALI---- 169
Query: 544 NHESPLRARDFVTRKITHAIAMIKLGKL-----DVLKLGNLDAKRDWGFAKEYVDGMWRM 708
+R + + ++ H + + KL ++ LG+ ++ + + +DG+ ++
Sbjct: 170 -----IRLANIIGKRSNHGVIYDFINKLKANPNELEILGDGTQRKSYLHISDTIDGIMKL 224
Query: 709 LQ-----ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLV 873
+ + D + L TV++ + + +++ +K GVD G
Sbjct: 225 FEHFLNGEERVDFYNLGNEDWITVKEIAEIVSEEMNLNPRFKFTG----GVDGGRG---- 276
Query: 874 TINPKFYRPAEVDLLIGNPAKARTKLGWEPK 966
+V L++ + KA+ + GW+P+
Sbjct: 277 -------WKGDVKLMLLSIEKAK-RTGWKPR 299
>gi|119687|sp|P26503|EXOB_RHIME UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) >gi|95226|pir||S16300 UDPglucose
4-epimerase (EC 5.1.3.2) - Rhizobium meliloti
>gi|581518|emb|CAA41127| (X58126) UDP-glucose 4-epimerase
[Sinorhizobium meliloti]
Length = 328
Score = 49.6 bits (116), Expect = 4e-05
Identities = 83/341 (24%), Positives = 122/341 (35%), Gaps = 23/341 (6%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRS-SSLNFWRINELGIAQHPKLH 171
M N + ++ G G G++ L GY VVY W + E G
Sbjct: 1 MQNNNILVVGGAGYIGSHTCLQLAAKGYQPVVYDNLSNGHEEFVKWGVLEKG-------- 52
Query: 172 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
D+ D +L P+ + + AA VG S P D +G + LL A
Sbjct: 53 ----DIRDRQRLDEVLARHKPRAILHFAAMIEVGESVKDPAAFYDNNVIGTLTLLSAALA 108
Query: 352 VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 531
F +ST +G P E P +PYG K W+ + YG++
Sbjct: 109 AGIDA-FVFSSTCATYGLPDSVPMDESHKQAPINPYGRTK----WICEQALKDYGLYKGL 163
Query: 532 GILFNHESPLRARDFVTR------KITHAIAMI---KLGKLDVLKLGNLDAK-RDWGFAK 681
+ DF R THAI + LG+ + K+ D RD +
Sbjct: 164 RSVILRYFNAAGADFEGRIGEWHEPETHAIPLAIDAALGRREGFKVFGTDYDTRDGTCVR 223
Query: 682 EYV------DGMWR----MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAE 831
+Y+ D R +L+ E L T TV++ + G AE
Sbjct: 224 DYIHVLDLADAHVRAVDYLLEGGESVALNLGTGTGTTVKELLDAIEKVAKRPFNI-GYAE 282
Query: 832 RECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 1011
R R + L+ N KAR LGWEP+ L +
Sbjct: 283 R--------------------REGDSTTLVANNDKARQVLGWEPQYDLAAITESAWNWHS 322
Query: 1012 RRSE 1023
RR++
Sbjct: 323 RRNQ 326
>gi|2494667|sp|Q57301|GALE_YEREN UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1163935 (U43708) Description: homolog of galE; UDP
galactose epimerase homolog; Method: conceptual
translation supplied by author [Yersinia enterocolitica]
>gi|1197656 (U46859) GalE [Yersinia enterocolitica (type
0:8)] >gi|1588475|prf||2208415E UDP-galactose
4-epimerase [Yersinia enterocolitica]
Length = 336
Score = 49.2 bits (115), Expect = 6e-05
Identities = 73/324 (22%), Positives = 136/324 (41%), Gaps = 11/324 (3%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMG--YVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
S +ITG G G++ LLE G VV SS+ + R++++ + P + D
Sbjct: 2 SILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINSSAESLARVSKI-CGRKPNFY--HGD 58
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D S + V + A VG S ++P+ VG++ LLE + + N K
Sbjct: 59 ILDRSCLKLIFSSHKIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVKK 118
Query: 367 RFYQASTSEMFGKVQQTPQIEETPFY-PRSPYGIAKLYAHWMTVNYRESYGIFAASGI-L 540
+ +S + ++G+ + P E+ +PYG +K+ + ++ ++ ++ + +
Sbjct: 119 LIFSSSAT-VYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKDFSLAHPDYSITALRY 177
Query: 541 FN----HESPLRARD--FVTRKITHAIAMIKLGKLD-VLKLGNLDAKRDWGFAKEYVDGM 699
FN H S L D + I + +GKL +L GN D ++Y+ M
Sbjct: 178 FNPVGAHPSGLIGEDPNGKPNNLLPFITQVAIGKLSKLLVYGNDYDTPDGSGIRDYIHVM 237
Query: 700 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 879
L T + T+ + S + + E++ + D+ S
Sbjct: 238 --DLAEGHLSTLINLTSGFRIYNLGTGVGYSVLHMIKEFERITGKNIPFDIVSR------ 289
Query: 880 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 984
RP ++ +P A +LGW K TL ++
Sbjct: 290 -----RPGDIAECWASPELAHLELGWYAKRTLVDM 319
>gi|4995692|emb|CAB44218.1| (AJ011653) UDP-galactose 4-epimerase
[Lactococcus lactis]
Length = 326
Score = 48.8 bits (114), Expect = 7e-05
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 9/324 (2%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 192
+ ++ G G G++ +L+ GY V + N + +++ K+ E D+
Sbjct: 2 TVLVLGGAGYVGSHAVDMLVNRGYDV------AVVDNLVTGHREAVSE--KVRFYEGDVR 53
Query: 193 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 372
D + + E + + + A S VG S +PL + GA +LE + K
Sbjct: 54 DHAFLASVFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEFGVKHIV 113
Query: 373 YQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHE 552
+ +ST+ FG +++P E+TP P +PYG +KL M ++ + + FN
Sbjct: 114 F-SSTAATFGIPEESPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVALRYFNVA 172
Query: 553 SPLRARD-----FVTRKITHAIAMI---KLGKLDVLKLGNLDAKR-DWGFAKEYVDGMWR 705
A+D + TH I +I LG+ + + + D + D ++Y+D
Sbjct: 173 G---AKDDGSIGEAHKNETHLIPIILQTALGQREFITIYGDDYQTPDGTCIRDYID---- 225
Query: 706 MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 885
M E L ++ D +L +S LE A + G ++ S
Sbjct: 226 MEDLIEAHIKALEYLKSGGKSDQFNLGSSKGYSNLEVLETARKVTGKEIPS-------QM 278
Query: 886 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 984
RP + D L+ + KA LGW+ K LE +
Sbjct: 279 GERRPGDPDELVADSTKAGEILGWKVKNDLEHI 311
>gi|2921560|gb|AAC04827.1| (AF039306) UDP-glucose 4'-epimerase
[Bradyrhizobium japonicum]
Length = 330
Score = 48.8 bits (114), Expect = 7e-05
Identities = 81/318 (25%), Positives = 126/318 (39%), Gaps = 18/318 (5%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
+ ++TG G G++ + L GY VVY G LV D
Sbjct: 6 TVLVTGGAGYIGSHACRALSAAGYQPVVYDNL------------STGHRSFVAGPLVIGD 53
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
L D ++ R V + AA S VG S P G ++LL+A+R
Sbjct: 54 LLDDAALARAFADHKVTAVMHFAAASLVGESMTDPQKYYINNVQGTLSLLQAMRNAGCH- 112
Query: 367 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 546
R +ST ++G E+ P P +PYG +K M +YR +YG A FN
Sbjct: 113 RIVFSSTGAVYGNADSKELPEDFPCAPINPYGASKWMIERMLADYRAAYGFGAFCLRYFN 172
Query: 547 HESPLRA------RDFVTRKITHAIAMIKLGKLDVLKLG------NLDAKRDW----GFA 678
A RD T I A+ ++ G +D G + A RD+ A
Sbjct: 173 ASGADPAGGIGELRDNETHLIPRAMMALQ-GHVDFAVFGDDYDTPDGTAIRDYIHVTDLA 231
Query: 679 KEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVAS 858
+V + + Q +F L T +VR+ ++ +E G +V
Sbjct: 232 AAHVAALKLLEQGHAGGSFNLGTGSGFSVREILN--------------AIRQETGREVPH 277
Query: 859 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPK 966
T+ P+ R + L+ +P+ AR L + P+
Sbjct: 278 -----TVKPR--RAGDPTYLVADPSAARKVLNFVPR 306
>gi|132502|sp|P26397|RFBG_SALTY CDP-GLUCOSE 4,6-DEHYDRATASE
>gi|96842|pir||S15305 rfbG protein - Salmonella
typhimurium >gi|47895|emb|CAA40121| (X56793) CDP-glucose
4,6-dehydratase [Salmonella enterica]
Length = 359
Score = 48.4 bits (113), Expect = 1e-04
Identities = 37/115 (32%), Positives = 61/115 (52%), Gaps = 7/115 (6%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRS----SSLNFWRINELGIAQHPKLHLV 177
K +TG TG G++L+ L EMG +V G + S R+N+L +
Sbjct: 10 KRVFVTGHTGFKGSWLSLWLTEMGAIVKGYALDAPTVPSLFEIVRLNDL----------M 59
Query: 178 EYDLTDLSSSVRLLELAA---PKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
E + D+ +L A P+ V+++AAQ V +S++QP+ T +G V+LLE ++
Sbjct: 60 ESHIGDIRDFEKLRNSIAEFKPEIVFHMAAQPLVRLSYEQPIETYSTNVMGTVHLLETVK 119
Query: 349 IV 354
V
Sbjct: 120 QV 121
>gi|4128133|emb|CAA06840| (AJ006068) dTDP-D-glucose 4,6-dehydratase
[Homo sapiens] >gi|5737699|gb|AAD50061.1|AF048686_1
(AF048686) dTDP-glucose 4,6-dehydratase like protein
[Homo sapiens]
Length = 350
Score = 48.4 bits (113), Expect = 1e-04
Identities = 72/324 (22%), Positives = 134/324 (41%), Gaps = 7/324 (2%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLE--MGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY 183
K ++TG G +++ L+E Y++ + + + + Q+ K ++
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKF--IQG 75
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 363
D+ D L E V + AAQ+ V +SF + T + G L+ A +
Sbjct: 76 DICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVE 135
Query: 364 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYG----IFAAS 531
+F ST E++G E +P P +PY +K A +Y E Y I +S
Sbjct: 136 -KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 532 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 711
+ H+ P + I I++++ + + L R++ +A + V+ +L
Sbjct: 195 NVYGPHQYP-------EKVIPKFISLLQHNRKCCIHGSGLQT-RNFLYATDVVEAFLTVL 246
Query: 712 QADEP-DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 888
+ +P + + + TN +V V LA + + E ++E E VD + + N
Sbjct: 247 KKGKPGEIYNIGTNFEMSV---VQLAKELIQLIKETNSESEMENWVDYVNDR---PTNDM 300
Query: 889 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
Y P + + + G LGW PK +E
Sbjct: 301 RY-PMKSEKIHG--------LGWRPKVPWKE 322
>gi|2842588|sp|Q58455|YA55_METJA HYPOTHETICAL PROTEIN MJ1055
>gi|2127791|pir||F64431 capsular polysaccharide
biosynthesis protein I homolog - Methanococcus jannaschii
>gi|1591707 (U67548) capsular polysaccharide biosynthesis
protein I [Methanococcus jannaschii]
Length = 326
Score = 48.0 bits (112), Expect = 1e-04
Identities = 76/331 (22%), Positives = 140/331 (41%), Gaps = 14/331 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFW------RINELGIAQHPKLH 171
K+ ++TG G G +L++ L++ Y + N++ + NE+ + +
Sbjct: 4 KNILVTGSAGFIGFHLSKYLMD-NYEDLKVIGIDNLNNYYNPVLKEKRNEI-LKNYENYT 61
Query: 172 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 351
++ D +D V L+ + +L AQ+ V S P +G +N+ E R
Sbjct: 62 FIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARR 121
Query: 352 VNPKIRFYQASTSEMFGKVQQTPQIEETPF-YPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
+ + Y AS+S ++G ++ P E+ P S Y K M Y YGI
Sbjct: 122 FDIEKVVY-ASSSSVYGGNRKIPFSEDDRVDKPISLYASTKRSNELMAHVYHHLYGIKMI 180
Query: 529 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 708
F D K I + K +++V GN++ RD+ + + VDG+ R
Sbjct: 181 GLRFFTVYGEYGRPDMAYFKFAKNILLGK--EIEVYNYGNME--RDFTYISDVVDGILRA 236
Query: 709 LQAD-EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 885
++ D + + F L ++ + F+ L ++ L K +
Sbjct: 237 IKKDFDYEIFNLGNSKPVKLMYFIEL----IEKYLNKKAK-------------------K 273
Query: 886 KFYRPAEVDLL--IGNPAKARTKLGWEPKTTLEE----LCHMMME 1002
KF + D+L + +K+ LG++PK T+EE C+ +E
Sbjct: 274 KFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNWFLE 318
>gi|4581414|emb|CAB40159.1| (AL031295) dJ886K2.3(GALE
(UDP-galactose-4-epimerase)) [Homo sapiens]
Length = 348
Score = 48.0 bits (112), Expect = 1e-04
Identities = 71/326 (21%), Positives = 135/326 (40%), Gaps = 29/326 (8%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYV------VYGTYRRSSSL--NFWRINELGIAQHPK 165
+ ++TG G G++ LLE GY+ + +R SL + R+ EL
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL---TGRS 59
Query: 166 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
+ E D+ D + RL + + V + A VG S +PL + G + LLE +
Sbjct: 60 VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 346 RIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYP-RSPYGIAKLYAHWMTVNYRESYGIF 522
+ K + +S++ ++G Q P E P +PYG +K + M + ++ +
Sbjct: 120 KAHGVKNLVF-SSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 523 AASGILFNHESPLRAR---------DFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG- 672
A +L + +P A + + ++ + +G+ + L + D + G
Sbjct: 179 NA--VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 673 ----------FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKG 822
AK ++ + ++ + + L T +V V A ++ +K
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
Query: 823 QAERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
A RE +V NP+ A+ +LGW L+ +C
Sbjct: 297 VARRE---------------------GDVAACYANPSLAQEELGWTAALGLDRMC 330
>gi|1710031|sp|P55293|RBB2_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|799232|gb|AAC63612.1| (AF125322) RmlB [Escherichia
coli]
Length = 361
Score = 48.0 bits (112), Expect = 1e-04
Identities = 61/246 (24%), Positives = 104/246 (41%), Gaps = 19/246 (7%)
Frame = +1
Query: 241 VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--------NPKIRFYQASTSEM 396
V +LAA+S V S P + VG LLEA R RF+ ST E+
Sbjct: 77 VMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHISTDEV 136
Query: 397 FGKVQQTPQI----------EETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 546
+G + ++ E T + P SPY +K + + ++ +YG+ N
Sbjct: 137 YGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVSNCSN 196
Query: 547 HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML-QADE 723
+ P F + I I GK + G D RDW + +++ ++ ++ +
Sbjct: 197 NYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDWLYVEDHARALYTVVTEGKA 252
Query: 724 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 903
+T+ + + + D V +D ++ K ++ RE T V P R
Sbjct: 253 GETYNIGGHNEKKNIDVVFTICDLLD-EIVPKEKSYRE-------QITYVADRPGHDRRY 304
Query: 904 EVDLLIGNPAKARTKLGWEPKTTLE 978
+D K +LGW+P+ T E
Sbjct: 305 AID-----ADKISRELGWKPQETFE 324
>gi|2129759|pir||S62783 UDPglucose 4-epimerase (EC 5.1.3.2) -
Arabidopsis thaliana >gi|1143392|emb|CAA90941| (Z54214)
uridine diphosphate glucose epimerase [Arabidopsis
thaliana]
Length = 351
Score = 47.6 bits (111), Expect = 2e-04
Identities = 76/326 (23%), Positives = 141/326 (42%), Gaps = 26/326 (7%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVV--YGTYRRSSSLNFWRINEL-GIAQHPKLHLVE 180
++ ++TG G G + LL+ G+ V + S R+ EL G KL
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL 66
Query: 181 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 360
DL + +L V + A VG S ++ D VG +NL E + N
Sbjct: 67 GDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVEKGRRYFDNNLVGTINLYETMAKYNC 126
Query: 361 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 540
K+ + +S + ++G+ ++ P +E+ +PYG KL+ + + +++ + IL
Sbjct: 127 KMMVFSSSAT-VYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRI--IL 183
Query: 541 FNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLD-------AKRDWG 672
+ +P+ A + + + I + +G+L L + D A RD+
Sbjct: 184 LRYFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYI 243
Query: 673 FAKEYVDG---MWRMLQADEP---DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAER 834
+ DG R L AD + L T + +V + V+
Sbjct: 244 HVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVA------------------ 285
Query: 835 ECGVDVASGKTL-VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
+ ASGK + + + P+ R + + + KA +LGW+ K ++E+C
Sbjct: 286 --AFEKASGKKIPIKLCPR--RSGDATAVYASTEKAEKELGWKAKYGVDEMC 333
>gi|1197641 (U46859) DdhB [Yersinia enterocolitica (type 0:8)]
Length = 358
Score = 47.3 bits (110), Expect = 2e-04
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYG---------TYRRSSSLNFWRINELGIAQH 159
+K ITG TG G++L+ L MG V G + ++++ I+E+G
Sbjct: 9 DKRVFITGHTGFKGSWLSLWLQNMGAKVKGYALDAPTKPSLFEAANVADGMISEVG---- 64
Query: 160 PKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLE 339
D+ + + ++ + P+ V+++AAQS V +S+ +P+ T +G V LLE
Sbjct: 65 --------DIRNYAQLLKSINDFKPEIVFHMAAQSLVRLSYLEPVETYSTNVMGTVYLLE 116
Query: 340 AIRIVNPKIRFYQASTSEMF-GKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESY 513
A+R V ++ + + K E+ PY +K A +T +YR S+
Sbjct: 117 ALRHVGGAKAIVNVTSDKCYENKEWVWGYREDESMGGYDPYSNSKGCAELVTSSYRNSF 175
>gi|4008544|emb|CAA22513| (AL034492) putative nucleotide-sugar
dehydratase [Streptomyces coelicolor]
Length = 330
Score = 47.3 bits (110), Expect = 2e-04
Identities = 53/183 (28%), Positives = 79/183 (42%), Gaps = 6/183 (3%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
+ A++TG G G++L LL+ G V ++ R N + + V D
Sbjct: 17 RRALVTGGAGFVGSHLCGRLLDAGTEVVCLDNLATGS---RANVADLERRRGFRFVRGDA 73
Query: 190 TDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
TD ++ L L + V + A + PL T D+ G N LE R
Sbjct: 74 TDPAA---LRGLPGRFDLVLHFACPASPADYLRLPLETLDVGSTGTRNALE--RAHADGA 128
Query: 367 RFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 531
RF ASTSE++G + PQ E P PRS Y +K +A + +R+ +G A
Sbjct: 129 RFLLASTSEVYGDPLEHPQRETYWGNVNPIGPRSVYDESKRFAEALVTAHRQVHGTDTAI 188
Query: 532 GILFNHESP 558
+FN P
Sbjct: 189 VRIFNTYGP 197
>gi|2621436 (AE000823) UDP-glucose 4-epimerase related protein
[Methanobacterium thermoautotrophicum]
Length = 332
Score = 47.3 bits (110), Expect = 2e-04
Identities = 72/324 (22%), Positives = 127/324 (38%), Gaps = 5/324 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
K ++TG G G+ L L + G V SSS E I ++ + V+ D+
Sbjct: 12 KCVLVTGGAGCVGSNLTGNLAKAGANVIILDNLSSSY------EWNIPEYENIEFVKGDI 65
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
D R+ + P V++LAA S D P + G+G + +LE ++V +
Sbjct: 66 LDDEVLKRVFK-ERPDYVFHLAAHFANQNSVDNPEKDLLVNGLGILKVLEYAQLVGVERF 124
Query: 370 FYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 546
Y +S ++G + P + + +PY + KL T + Y + + FN
Sbjct: 125 VYSSSGCGVYGLDSKIPFEEHDISISLHTPYQVTKLLGELYTNYFHNLYEMPIVNARFFN 184
Query: 547 ----HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 714
E P + R+ + A + + + G+ RDW F ++ V G+ M
Sbjct: 185 VFGPGEVPGKYRNVIPNFFYWA-----MNQQPLPITGDGSETRDWTFVEDIVRGLMAM-- 237
Query: 715 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 894
R E + + ++L + +E G ++ V P+
Sbjct: 238 ----------GVRREAIGEAINLGSGTEHQVIEMAGIIN-----ELTENPAGVVYRPRRD 282
Query: 895 RPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
A+ LL + KAR L +EP+ + E
Sbjct: 283 WDAKTRLL-SSIDKARRLLDYEPQVSFRE 310
>gi|4234785|gb|AAD12953.1| (AF078135) unknown [Leptospira
borgpetersenii]
Length = 281
Score = 47.3 bits (110), Expect = 2e-04
Identities = 54/257 (21%), Positives = 105/257 (40%), Gaps = 1/257 (0%)
Frame = +1
Query: 193 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 372
D+S + +L K V +LA Q++V S+ + + +G N L+ + + F
Sbjct: 37 DVSDPLTWSKLPETKSVIHLAGQTYVPDSWKDSRSFINSNVMGTQNALDYALKYDAQFVF 96
Query: 373 YQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHE 552
A ++GK ++ P E P +PY ++K A + Y + + LFN
Sbjct: 97 ISAY---LYGKPEKLPISETHRIAPNNPYALSKHLAEQVCEFYSKFKNMNIIVLRLFNVY 153
Query: 553 SPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML-QADEPD 729
P + DF+ I + K +++ +L KRD+ + ++ ++ + L
Sbjct: 154 GPGQRGDFLIPTILKQVKTKK-----EIRVLDLSPKRDYIYLEDILNSISSALFPITGFH 208
Query: 730 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 909
TF + + + +V + +S+A L + + R E+
Sbjct: 209 TFNIGSGVSYSVEEVISIAQEIAHTSLPVLSECKE--------------------RKEEI 248
Query: 910 DLLIGNPAKARTKLGWEP 963
++ N +KA+ LGWEP
Sbjct: 249 FDVVANISKAKEVLGWEP 266
>gi|3874971|emb|CAB16861.1| (Z99709) similar to NAD dependant
epimerase/dehydratase family; cDNA EST EMBL:C10103 comes
from this gene; cDNA EST EMBL:D66400 comes from this
gene; cDNA EST EMBL:D70143 comes from this gene; cDNA
EST yk493h11.3 comes from t...
Length = 347
Score = 46.9 bits (109), Expect = 3e-04
Identities = 78/323 (24%), Positives = 144/323 (44%), Gaps = 25/323 (7%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKL--HLVEYDLT 192
++TG G G++ LL GY V +++++ N + + + +L V +
Sbjct: 4 LVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISDEHGNAISLKRVAQLTGKDVPFQNV 63
Query: 193 DLSSSVRLLELAAPKE---VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 363
D+ L ++ + + + +LAA VG S +PL V ++NL++ N K
Sbjct: 64 DVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKYNVK 123
Query: 364 IRFYQASTSEMFGKVQQTPQIE--ETPFYPRSPYG------------IAKLYAHWMTVNY 501
F +S++ ++G + P E +T +PYG + K W V
Sbjct: 124 -NFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNVVLL 182
Query: 502 RESYGIFAASGILFNHESPLRARD--FVTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWG 672
R + A H+S L D V + ++ + +GKL VL + G+ D
Sbjct: 183 RYFNPVGA-------HKSGLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGT 235
Query: 673 FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDF---VSLAASAVDIQLEWKGQAERECG 843
++Y+ + D V A +R +TV + + + V + A ++
Sbjct: 236 GVRDYIHVV------DLAKGHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKK-- 287
Query: 844 VDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
SG+ + + RP +V + +P+ A+ KLGW +T LEE+C
Sbjct: 288 ---VSGRD-IPVKIGVPRPGDVASVYCDPSLAQEKLGWRAETGLEEMC 331
>gi|581659|emb|CAA50767| (X71970) rfbB [Shigella flexneri]
Length = 361
Score = 46.9 bits (109), Expect = 3e-04
Identities = 63/265 (23%), Positives = 107/265 (39%), Gaps = 19/265 (7%)
Frame = +1
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 354
D+ D + R+ A + V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAVAMSRIFRTAPARRVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 355 -----NPKIRFYQASTSEMFGKVQQTPQIEETPFYP----------RSPYGIAKLYAHWM 489
RF+ ST E++G + + P SPY +K +
Sbjct: 118 LNDEKKKSFRFHHISTDEVYGDLPHPDEANNNETLPLFTETTTKRQNSPYSASKASNDHL 177
Query: 490 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 669
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 670 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 846
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 847 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
T V P R +D K +LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----ADKISRELGWKPQETFE 324
>gi|541221|pir||S41534 rfbB protein - Shigella flexneri
Length = 361
Score = 46.9 bits (109), Expect = 3e-04
Identities = 63/265 (23%), Positives = 107/265 (39%), Gaps = 19/265 (7%)
Frame = +1
Query: 184 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 354
D+ D + R+ A + V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAVAMSRIFRTAPARRVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 355 -----NPKIRFYQASTSEMFGKVQQTPQIEETPFYP----------RSPYGIAKLYAHWM 489
RF+ ST E++G + + P SPY +K +
Sbjct: 118 LNDEKKKSFRFHHISTDEVYGDLPHPDEANNNETLPLFTETTTKRQNSPYSASKASNDHL 177
Query: 490 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 669
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 670 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 846
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 847 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 978
T V P R +D K +LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----ADKISRELGWKPQETFE 324
>gi|4503891|ref|NP_000394.1|| galactose-4-epimerase, UDP-
>gi|2494659|sp|Q14376|GALE_HUMAN UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1119217 (L41668) UDP-galactose-4-epimerase [Homo
sapiens] >gi|2947219 (AF022382) UDP-galactose 4'
epimerase [Homo sapiens] >gi|1585500|prf||2201313A UDP
galactose 4'-epimerase [Homo sapiens]
Length = 348
Score = 46.5 bits (108), Expect = 4e-04
Identities = 70/326 (21%), Positives = 135/326 (40%), Gaps = 29/326 (8%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYV------VYGTYRRSSSL--NFWRINELGIAQHPK 165
+ ++TG G G++ LLE GY+ + +R SL + R+ EL
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL---TGRS 59
Query: 166 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
+ E D+ D + RL + + V + A VG S +PL + G + LLE +
Sbjct: 60 VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 346 RIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYP-RSPYGIAKLYAHWMTVNYRESYGIF 522
+ K + +S++ ++G Q P E P +PYG +K + M + ++ +
Sbjct: 120 KAHGVKNLVF-SSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 523 AASGILFNHESPLRAR---------DFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG- 672
+ +L + +P A + + ++ + +G+ + L + D + G
Sbjct: 179 --NVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 673 ----------FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKG 822
AK ++ + ++ + + L T +V V A ++ +K
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
Query: 823 QAERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
A RE +V NP+ A+ +LGW L+ +C
Sbjct: 297 VARRE---------------------GDVAACYANPSLAQEELGWTAALGLDRMC 330
>gi|633875|bbs|154466 (S72887) CDP-D-glucose 4,6-dehydratase, Eod
[Yersinia pseudotuberculosis, serogroup VA, Peptide, 357
aa] [Yersinia pseudotuberculosis]
Length = 357
Score = 45.7 bits (106), Expect = 6e-04
Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 28/323 (8%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL-NFWRINELGIAQHPKLHLVEYD 186
K +TG TG G +L+ L MG V G + ++ + + + ++ D
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIG----D 65
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D + + + P+ V+++AAQ V +S+ +P+ T +G V LLEAIR V
Sbjct: 66 IRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVK 125
Query: 367 RFYQASTSEMF-GKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
++ + + K E PY +K A +T +YR S+ A G
Sbjct: 126 AVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYG--- 182
Query: 544 NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 723
H A+ ++ GN+ DW + D +L+A E
Sbjct: 183 ----------------QHGTAVA------TVRAGNVIGGGDWALDRIVPD----ILRAFE 216
Query: 724 PDTFVLATNR---------TETVRDFVSLAASAVDIQLEW-KGQAERECGVDVASGKTLV 873
V+ N E + ++ LA E+ +G D K +V
Sbjct: 217 QSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIV 276
Query: 874 TINPKFY------------RPAEVDLLIGNPAKARTKLGWEPK----TTLE 978
N K++ P E L + +KA+ +LGW P+ TTLE
Sbjct: 277 EQNVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLE 327
>gi|544367|sp|P35673|GALE_ERWAM UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1073276|pir||A36951 UDPglucose 4-epimerase (EC
5.1.3.2) - Erwinia amylovora >gi|429078|emb|CAA53767|
(X76172) UDP-glucose 4-epimerase [Erwinia amylovora]
Length = 337
Score = 45.7 bits (106), Expect = 6e-04
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMG--YVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
S ++TG G G++ LL+ G V+ +S + R+ +L E D
Sbjct: 2 SILVTGGAGYIGSHTVLSLLQRGDDVVILDNLSNASRESINRVEKL---TGKTATFFEGD 58
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
L D S + V + A VG S +PL G + LLE +R
Sbjct: 59 LLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVN- 117
Query: 367 RFYQASTSEMFGKVQQTPQIEETPF-YPRSPYGIAKLYAHWMTVNYRESYGIFAASGI-L 540
+F +S++ ++G P +E TP SPYG +KL + +Y ++ F +
Sbjct: 118 QFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEFKTIALRY 177
Query: 541 FN----HESPLRARD--FVTRKITHAIAMIKLGKLDVL 636
FN HES D + + IA + +G+L+ L
Sbjct: 178 FNPVGAHESGQMGEDPNGIPNNLLPYIAQVAIGRLEKL 215
>gi|730819|sp|P39630|SPSJ_BACSU SPORE COAT POLYSACCHARIDE
BIOSYNTHESIS PROTEIN SPSJ >gi|629079|pir||S39727
hypothetical protein - Bacillus subtilis
>gi|413996|emb|CAA51628| (X73124) ipa-72d [Bacillus
subtilis] >gi|2636318|emb|CAB15809| (Z99123) alternate
gene name: ipa-72d [Bacillus subtilis]
Length = 315
Score = 44.9 bits (104), Expect = 0.001
Identities = 77/324 (23%), Positives = 134/324 (40%), Gaps = 15/324 (4%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP--------- 162
KS +ITG G G +L+L R + +++L A HP
Sbjct: 3 KSYLITGGAGFIGLTFTKLML-----------RETDARITVLDKLTYASHPEEMEKLKQN 51
Query: 163 -KLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQ--PLTTTDITGVGAVNL 333
+ V+ D++ R + V + AA+S V S Q P TT++ +G L
Sbjct: 52 SRFRFVKGDISVQEDIDRAFD-ETYDGVIHFAAESHVDRSISQAEPFITTNV--MGTYRL 108
Query: 334 LEAIRIVNPKIRFYQASTSEMFG--KVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRE 507
EA+ K + ST E++G K E TP P +PY +K + + ++Y +
Sbjct: 109 AEAVLKGKAK-KLIHISTDEVYGDLKADDPAFTETTPLSPNNPYSASKASSDLLVLSYVK 167
Query: 508 SYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEY 687
++ + A N+ P + + + I I K G L V G+ RDW FA+++
Sbjct: 168 THKLPAIITRCSNNYGPYQHSE---KMIPTIIRHAKQG-LPVPLYGDGLQIRDWLFAEDH 223
Query: 688 VDGMWRMLQ-ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGK 864
+ +L+ + + + + T ++ S + L+ G E V+ G
Sbjct: 224 CRAIKLILEKGTDGEVYNIGGGNERTNKELAS-------VILKHLGCEELFAHVEDRKG- 275
Query: 865 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 981
+ + Y N +K + +LGW + T EE
Sbjct: 276 -----HDRRYAI--------NASKLKNELGWRQEVTFEE 301
>gi|609642 (L33181) CDP-D-glucose-4,6-dehydratase [Yersinia
pseudotuberculosis] >gi|6580715|emb|CAB63291.1|
(AJ251712) CDP-glucose-4,6-dehydratase [Yersinia
pseudotuberculosis]
Length = 357
Score = 44.9 bits (104), Expect = 0.001
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL-NFWRINELGIAQHPKLHLVEYD 186
K +TG TG G +L+ L MG V G + ++ + + + ++ D
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIG----D 65
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D + + + P+ V+++AAQ V +S+ +P+ T +G V LLEAIR V
Sbjct: 66 IRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVK 125
Query: 367 RFYQASTSEMF-GKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESY 513
++ + + K E PY +K A +T +YR S+
Sbjct: 126 AVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSF 175
>gi|421277|pir||D47070 CDP-glucose-4,6-dehydratase - Yersinia
pseudotuberculosis >gi|155497|gb|AAB49400.1| (L01777)
CDP-glucose 4,6-dehydratase [Yersinia
pseudotuberculosis]
Length = 357
Score = 44.5 bits (103), Expect = 0.001
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL-NFWRINELGIAQHPKLHLVEYD 186
K +TG TG G +L+ L MG V G ++ + + + ++ D
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLAPPTVPSLFETARVADGMQSEIG----D 65
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D + + + P+ V+++AAQ V +S+ +P+ T +G V LLEAIR V
Sbjct: 66 IRDQNKLLEAIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVK 125
Query: 367 RFYQASTSEMF-GKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESY 513
++ + + K E PY +K A +T +YR S+
Sbjct: 126 AVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSF 175
>gi|3451497|emb|CAA07653.1| (AJ007747) putative nucleotide sugar
epimerase/ dehydratase [Bordetella bronchiseptica]
Length = 313
Score = 44.1 bits (102), Expect = 0.002
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
K ITGI GQ G+++A+LLLE G V G NF + HP L VE +
Sbjct: 2 KKVFITGICGQIGSHIAELLLERGDKVVGID------NFATGRREHLKDHPNLTFVEGSI 55
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQP---LTTTDITGVGAVNLLEAIRIVNP 360
D + +L+ P V + AA S+ P T VG N+++A + N
Sbjct: 56 ADHALVNQLIGDLQPDAVVHTAA------SYKDPDDWYNDTLTNCVGGSNVVQAAK-KNN 108
Query: 361 KIRFYQASTSEMFG--KVQQTPQIEETPFYPRSPYGIAK 471
RF T+ +G +QQ +++ S Y I+K
Sbjct: 109 VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISK 147
>gi|120930|sp|P09609|GALX_KLULA GAL10 BIFUNCTIONAL PROTEIN
[INCLUDES: UDP-GLUCOSE 4-EPIMERASE (GALACTOWALDENASE);
ALDOSE 1-EPIMERASE (MUTAROTASE)] >gi|68389|pir||XUVKG
UDPglucose 4-epimerase (EC 5.1.3.2) - yeast
(Kluyveromyces marxianus var. lactis)
>gi|2819|emb|CAA30090| (X07039) transferase (GAL10) (AA
1 - 687) [Kluyveromyces lactis]
Length = 687
Score = 44.1 bits (102), Expect = 0.002
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
+K ++TG G G++ L E GY S+S ++ + + + ++ + D
Sbjct: 4 DKYCLVTGGAGYIGSHTVVELCEAGYKCIVVDNLSNS-SYESVARMELLTGQEIKFAKID 62
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
L +L +L + V + A VG S PLT VG +NLLE ++ + K
Sbjct: 63 LCELEPLNKLFDDYKIDSVLHFAGLKAVGESTQIPLTYYFNNIVGTINLLECMKSHDVK- 121
Query: 367 RFYQASTSEMFGKV----QQTPQIEETPFYPRSPYGIAKL 474
+ +S++ ++G P E P P +PYG KL
Sbjct: 122 KLVFSSSATVYGDATRFENMIPIPETCPTGPTNPYGKTKL 161
>gi|4206182 (U60828) UDP-galactose-4-epimerase [Lactococcus lactis]
Length = 330
Score = 43.0 bits (99), Expect = 0.004
Identities = 77/324 (23%), Positives = 132/324 (39%), Gaps = 15/324 (4%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGYVVYGT------YRRSSSLNFWRINELGIAQHPKLHL 174
+ ++ G G G++ +LL+ GY V +R S N +
Sbjct: 6 TVLVLGGAGYVGSHAVDMLLKRGYDVAVVDNLVTGHRESVPAN--------------VRF 51
Query: 175 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 354
E D+ D + + E + + + A S VG S +PL + GA +LE +
Sbjct: 52 YEGDVRDHAFLASVFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEF 111
Query: 355 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 534
K + +ST+ FG +++P E+TP P +PYG +KL M ++ + +
Sbjct: 112 GVKHIVF-SSTAATFGIPEKSPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVAL 170
Query: 535 ILFNHESPLRARD-----FVTRKITHAIAMI---KLGKLDVLKL-GNLDAKRDWGFAKEY 687
FN A+D + TH I +I LG+ + + + G+ D ++Y
Sbjct: 171 RYFNVAG---AKDDGSIGEAHKNETHLIPIILQTALGQREFITIYGDDYHTPDGTCIRDY 227
Query: 688 VDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKT 867
+D M E L + D +L +S LE A + G ++ S
Sbjct: 228 ID----MEDLIEAHIKALEYLKAGGQSDQFNLGSSKGYSNLEVLETARKVTGKEIPS--- 280
Query: 868 LVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 984
R + D L+ + KA LGW+ + LE +
Sbjct: 281 ----QMGERRAGDPDELVADSTKAGEILGWKAQNDLEHI 315
>gi|3703056 (AF082008) UDP-galactose-4-epimerase [Lactococcus
lactis]
Length = 326
Score = 43.0 bits (99), Expect = 0.004
Identities = 77/324 (23%), Positives = 132/324 (39%), Gaps = 15/324 (4%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGYVVYGT------YRRSSSLNFWRINELGIAQHPKLHL 174
+ ++ G G G++ +LL+ GY V +R S N +
Sbjct: 2 TVLVLGGAGYVGSHAVDMLLKRGYDVAVVDNLVTGHRESVPAN--------------VRF 47
Query: 175 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 354
E D+ D + + E + + + A S VG S +PL + GA +LE +
Sbjct: 48 YEGDVRDHAFLASVFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEF 107
Query: 355 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 534
K + +ST+ FG +++P E+TP P +PYG +KL M ++ + +
Sbjct: 108 GVKHIVF-SSTAATFGIPEKSPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVAL 166
Query: 535 ILFNHESPLRARD-----FVTRKITHAIAMI---KLGKLDVLKL-GNLDAKRDWGFAKEY 687
FN A+D + TH I +I LG+ + + + G+ D ++Y
Sbjct: 167 RYFNVAG---AKDDGSIGEAHKNETHLIPIILQTALGQREFITIYGDDYHTPDGTCIRDY 223
Query: 688 VDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKT 867
+D M E L + D +L +S LE A + G ++ S
Sbjct: 224 ID----MEDLIEAHIKALEYLKAGGQSDQFNLGSSKGYSNLEVLETARKVTGKEIPS--- 276
Query: 868 LVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 984
R + D L+ + KA LGW+ + LE +
Sbjct: 277 ----QMGERRAGDPDELVADSTKAGEILGWKAQNDLEHI 311
>gi|2621441 (AE000823) UDP-glucose 4-epimerase homolog
[Methanobacterium thermoautotrophicum]
Length = 316
Score = 43.0 bits (99), Expect = 0.004
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 1/191 (0%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 180
M + +TG G G++L LLE G V L+ + L H L ++E
Sbjct: 1 MRDMDVAVTGGLGFIGSHLTDELLERGNRVTVI----DDLSTGSPDNLRDPHHEDLEIIE 56
Query: 181 YDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
+ DL L ++ K+ V++ AA + V S PL + G + +L A
Sbjct: 57 GSINDLD----LEKVFQGKDYVFHQAALASVPESVRDPLRCHRVNATGTLRVLMASSRAG 112
Query: 358 PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 537
+ + ASTS ++G + P E+ P SPY ++K+ + + E G+ S
Sbjct: 113 VR-KVVNASTSAVYGNNPEIPLREDARPMPLSPYAVSKVTGEYYCQVF-EDQGLETVSLR 170
Query: 538 LFNHESPLRARD 573
FN P + D
Sbjct: 171 YFNVYGPRQRPD 182
>gi|2983012 (AE000684) ADP-L-glycero-D-manno-heptose-6-epimerase
[Aquifex aeolicus]
Length = 310
Score = 41.8 bits (96), Expect = 0.009
Identities = 50/201 (24%), Positives = 85/201 (41%), Gaps = 4/201 (1%)
Frame = +1
Query: 379 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LFNHES 555
AS++ ++G P E+ P + YG +KL + ++Y E Y G+ FN
Sbjct: 115 ASSAGVYGN-SPPPMREDKGLEPENIYGFSKLMMDHIAMDYMERYPEMNIVGLRYFNVYG 173
Query: 556 PLRARDFVTRKITH--AIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 729
P T + + A+ MIK + + K G + +RD+ + K+ + L+ +
Sbjct: 174 PREDYKGKTASMIYQLAVKMIKGERPRLFKWG--EQRRDFVYIKDVIKANLLALEKNVSG 231
Query: 730 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP-AE 906
F + T R + + VS+ + E + +C D FY+ E
Sbjct: 232 IFNVGTGRARSFNEIVSILNKELGTNYEIE---YFDCPYD-------------FYQKFTE 275
Query: 907 VDLLIGNPAKARTKLGWEPKTTLEE 981
DL K R LG+EP+ +LEE
Sbjct: 276 ADL-----TKIREALGYEPEYSLEE 295
>gi|5051487|emb|CAB44766.1| (AL078627) UDP glucose NAD dependant
epimerase/dehydratase [Schizosaccharomyces pombe]
Length = 355
Score = 41.8 bits (96), Expect = 0.009
Identities = 81/342 (23%), Positives = 142/342 (40%), Gaps = 32/342 (9%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
+ ++TG G G++ +LLE GY V+ S RI +L K+ + D
Sbjct: 8 TVLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKL---TGKKVIFHQVD 64
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
L D + ++ V + A VG S PL+ G +NL+E ++ N +
Sbjct: 65 LLDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVR- 123
Query: 367 RFYQASTSEMFGKVQQ----TPQIEETPFYPRSPYGIAKLY-AHWMTVNYRESYGIFAAS 531
F +S++ ++G + P E P SPYG KL+ + + + + + AA
Sbjct: 124 DFVFSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETKVNKSLNAAL 183
Query: 532 GILFN----HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVD 693
FN H S D + + IA + +G+LD L + F +Y
Sbjct: 184 LRYFNPGGAHPSGELGEDPLGIPNNLLPYIAQVAVGRLDHLNV----------FGDDY-- 231
Query: 694 GMWRMLQADEPDTFVLATNRTETVRDFVSLA--ASAVDIQLEWKGQAEREC---GVDVAS 858
T+ +RD++ + A A L++ Q C + +
Sbjct: 232 ----------------PTSDGTPIRDYIHVCDLAEAHVAALDYLRQHFVSCRPWNLGSGT 275
Query: 859 GKTLVTINPKFYRPAEVDL--------------LIGNPAKARTKLGWEPKTTLEELCHMM 996
G T+ + F + DL L NP +A +L W+ ++ E+C
Sbjct: 276 GSTVFQVLNAFSKAVGRDLPYKVTPRRAGDVVNLTANPTRANEELKWKTSRSIYEIC--- 332
Query: 997 MEADVRRSERDFPF 1038
D R ++ +P+
Sbjct: 333 --VDTWRWQQKYPY 344
>gi|120922|sp|P18645|GALE_RAT UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|112468|pir||S11223 UDPglucose 4-epimerase (EC
5.1.3.2) - rat >gi|57792|emb|CAA37897| (X53949)
UDP-galactose 4-epimerase (AA 1-347) [Rattus sp.]
Length = 347
Score = 41.4 bits (95), Expect = 0.012
Identities = 70/326 (21%), Positives = 132/326 (40%), Gaps = 30/326 (9%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYV------VYGTYRRSSSL--NFWRINELGIAQHPK 165
+ ++TG G G++ LLE GY + + R S+ + R+ EL
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQEL---TGRS 59
Query: 166 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
+ E D+ D ++ L + K V + A VG S +PL + G + LLE +
Sbjct: 60 VEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 346 RIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYP--RSPYGIAKLYAHWMTVNYRESYGI 519
R + K + +S++ ++GK P P + PYG +K + M + +
Sbjct: 120 RAMGVKSLVF-SSSATVYGK--PVPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRA--D 174
Query: 520 FAASGILFNHESPLRAR---------DFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 672
A + +L + P+ A + + ++ + +G+ + L + D + G
Sbjct: 175 TAWNAVLLRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDG 234
Query: 673 -----------FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWK 819
AK ++ + ++ + + L T +V V A ++ +K
Sbjct: 235 TGVRDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK 294
Query: 820 GQAERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 987
A RE +V NP+ A +LGW L+ +C
Sbjct: 295 VVARRE---------------------GDVAACYANPSLAHEELGWTAALGLDRMC 329
>gi|2494663|sp|Q59678|GALE_PASHA UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1304491 (U39043) uridine diphosphogalactose
4-epimerase [Pasteurella haemolytica]
Length = 338
Score = 40.2 bits (92), Expect = 0.028
Identities = 74/322 (22%), Positives = 134/322 (40%), Gaps = 21/322 (6%)
Frame = +1
Query: 19 VITGITGQDGAY-LAQLLLE-MGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 192
++TG G G++ L +LL E VV SS ++ R+ ++ + + D+
Sbjct: 4 LVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQI---TGKSVKFYQGDIL 60
Query: 193 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 372
D ++ + V + A VG + + T G++ L+E + N
Sbjct: 61 DRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKANVNTIV 120
Query: 373 YQASTSEMFGKVQQTPQIEETPFY-PRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LFN 546
+ +S + ++G Q P +E P +PYG +K + + +++ +A + FN
Sbjct: 121 FSSSAT-VYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILEDTVKAFPQLSAVVLRYFN 179
Query: 547 ----HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLDAK-------RDWGFAKEY 687
HES L D + + I+ + +GKL L + D RD+ +
Sbjct: 180 RVGAHESGLIGEDPNGIPNNLMPFISQVAVGKLPQLSVFGGDYNTHDGTGVRDYIHVVDL 239
Query: 688 VDGMWRMLQADEPDT----FVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA 855
G + L + D + L T +V D V +A I + +K VD
Sbjct: 240 ALGHLKALDKHQNDAGFHVYNLGTGTGYSVLDMVKAFEAANGITIPYKV-------VD-- 290
Query: 856 SGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 984
RP ++ + P KA +LGWE + LE++
Sbjct: 291 ------------RRPGDIAVCYSAPQKALEQLGWETERGLEQM 321
>gi|2496715|sp|P55579|Y4NG_RHISN HYPOTHETICAL 42.8 KD PROTEIN Y4NG
>gi|2182542 (AE000087) Y4nG [Rhizobium sp. NGR234]
Length = 396
Score = 39.1 bits (89), Expect = 0.062
Identities = 43/155 (27%), Positives = 69/155 (43%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
K+A++TG +G G L++ LL G TY R LN G + HP L ++ +
Sbjct: 50 KTALVTGGSGYFGELLSKQLLRQG-----TYVRVFDLN-----PPGFS-HPNLEFLKGTI 98
Query: 190 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 369
D ++VR K +N+A V ++ ++ L + G ++ + +
Sbjct: 99 LD-RNAVRQALSGIDKVFHNVAQ---VPLAKEKDLFWS--VNCGGTQIIVDESVATGIEK 152
Query: 370 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKL 474
F S+S +FG + P EET P YG AKL
Sbjct: 153 FVYTSSSAVFGAPKSNPVTEETEPNPAEDYGRAKL 187
>gi|1174963|sp|Q04973|VIPB_SALTI VI POLYSACCHARIDE BIOSYNTHESIS
PROTEIN VIPB/TVIC >gi|1361288|pir||C36892 Vi
polysaccharide biosynthetic protein vipB - Salmonella
typhi >gi|47961|emb|CAA47992| (X67785) wcdB; ORF3 in
citation [1] [Salmonella typhi] >gi|426446|dbj|BAA03193|
(D14156) WcdB protein [Salmonella typhi]
Length = 348
Score = 38.7 bits (88), Expect = 0.082
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIA----QHPKLHLV 177
K +ITG+ G G+ L + LL + V G S+ ++++ + Q + +
Sbjct: 16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQH-NLDDVRTSVSEEQWSRFIFI 74
Query: 178 EYDL---TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 348
+ D+ TD + + ++ V + AA V S P+ T G +N+L A R
Sbjct: 75 QGDIRKFTDCQKACKNVDY-----VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAAR 129
Query: 349 IVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 528
+ Y AS+S +G P+IEE P SPY + K + SY A
Sbjct: 130 DAHVSSFTYAASSST-YGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAI 188
Query: 529 SGILFN 546
FN
Sbjct: 189 GLRYFN 194
>gi|6090551|emb|CAB58730.1| (AL122032) putative cinnamoyl-coa
reductase [Schizosaccharomyces pombe]
Length = 336
Score = 38.7 bits (88), Expect = 0.082
Identities = 39/140 (27%), Positives = 61/140 (42%), Gaps = 1/140 (0%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 180
M K ++TG+TG GA++A+ LL+ GY V GT R + + L K+ V
Sbjct: 1 MSGKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKAD--ELIRLNPGLKDKIEFV- 57
Query: 181 YDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 357
+ D+S+S + E + ++A+ FV D D G + +LEA + V
Sbjct: 58 -IVKDVSASNAFDGVLKDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVK 116
Query: 358 PKIRFYQASTSEMFGKVQQTP 420
R S+ G Q P
Sbjct: 117 SIKRIVITSSFAAVGNFQIDP 137
>gi|462155|sp|Q05026|GALE_NEIGO UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|486715|pir||S34984 UDPglucose 4-epimerase (EC
5.1.3.2) - Neisseria gonorrhoeae
>gi|1051296|emb|CAA79721| (Z21508) UDP-glucose
4-epimerase [Neisseria gonorrhoeae]
Length = 338
Score = 36.0 bits (81), Expect = 0.54
Identities = 65/324 (20%), Positives = 135/324 (41%), Gaps = 23/324 (7%)
Frame = +1
Query: 13 SAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
+ +ITG TG G++ A L++ GY V+ SS+ R+ ++ P + D
Sbjct: 2 TVLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRLRQITGRNIP---FYQGD 58
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 366
+ D ++ + V + A VG S +P G++ L E + +
Sbjct: 59 IRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYGSLVLAEEMARAG-VL 117
Query: 367 RFYQASTSEMFGKVQQTPQIEE-TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 543
+ +S++ ++G ++ P E+ P +PYG +K M + +++ + S IL
Sbjct: 118 KIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPRW--SVILL 175
Query: 544 NHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLD-------AKRDWGF 675
+ +P+ A + V + I + G+L L + D RD+
Sbjct: 176 RYFNPIGAHESGLIGEQPNGVPNNLLPYICQVASGRLPQLSVFGGDYPTPDGTGMRDYIH 235
Query: 676 AKEYVDGMWRMLQAD----EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECG 843
+ +G ++A F L + R +V + + +A + + ++
Sbjct: 236 VMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAFEAASGLHIPYR-------- 287
Query: 844 VDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 984
I P+ R ++ +P+ + + GWE K L+++
Sbjct: 288 -----------IQPR--RAGDLACSYADPSHTKQQTGWETKRGLQQM 321
>gi|1765995 (U76617) UDP-glucose- 4-epimerase [Pasteurella
multocida]
Length = 338
Score = 34.8 bits (78), Expect = 1.2
Identities = 70/322 (21%), Positives = 131/322 (39%), Gaps = 21/322 (6%)
Frame = +1
Query: 19 VITGITGQDGAYLAQLLLEMG--YVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 192
++TG G G++ LL VV SS + R+ ++ Q + + D+
Sbjct: 4 LVTGGAGYIGSHTVVELLNANKDVVVLDNLCNSSPKSLERVAQITGKQ---VKFYQGDIL 60
Query: 193 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 372
D + ++ + V + A VG S +P G++ L++ ++ F
Sbjct: 61 DTALLQKIFAENQIQSVMHFAGLKAVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVW-NF 119
Query: 373 YQASTSEMFGKVQQTPQIEETPFY-PRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LFN 546
+S++ ++G + P E +PYG +K + + ++ F+ + + FN
Sbjct: 120 VFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEFSITILRYFN 179
Query: 547 ----HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLDAK-------RDWGFAKEY 687
HES L D + + I+ + +GKL L + D + RD+ +
Sbjct: 180 PVGAHESGLIGEDPNGIPNNLLPYISQVAIGKLPQLSVFGSDYETHDGTGVRDYIHVVDL 239
Query: 688 VDGMWRMLQADEPDT----FVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA 855
G + L E D + L T +V D V DI++ +K
Sbjct: 240 AIGQLKALDRHEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIPYK------------ 287
Query: 856 SGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 984
LV RP ++ +P+ A+T+L W LE++
Sbjct: 288 ----LVD-----RRPGDIATCYSDPSLAKTELNWTAARGLEQM 321
>gi|98916|pir||S18542 hypothetical protein 4 - Streptomyces
coelicolor >gi|46816|emb|CAA41640| (X58833) actVA 4
[Streptomyces coelicolor]
Length = 294
Score = 34.4 bits (77), Expect = 1.6
Identities = 31/103 (30%), Positives = 43/103 (41%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 186
NK ++ G TG+ G A+ LLE G+ V R + + ELG + H D
Sbjct: 5 NKPVLVLGATGKQGGSAARYLLERGWTVRAFVRDPGAPKAKELRELGASLHTG------D 58
Query: 187 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITG 315
L D + SVR AA K Y + S P+T + G
Sbjct: 59 LED-AGSVR----AAMKGAYGV-------FSIQTPMTPAGVEG 89
>gi|2058313|emb|CAA66063| (X97433) cinnamoyl-CoA reductase
[Eucalyptus gunnii]
Length = 317
Score = 33.6 bits (75), Expect = 2.7
Identities = 22/65 (33%), Positives = 32/65 (48%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
++ +TG G +++ +LLLE GY V GT R + EL A +L L + DL
Sbjct: 11 QTVCVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDPKNGHLRELEGASE-RLTLYKGDL 69
Query: 190 TDLSS 204
D S
Sbjct: 70 MDYGS 74
>gi|2239260|emb|CAA74071| (Y13734) cinnamoyl CoA reductase [Zea
mays]
Length = 371
Score = 33.6 bits (75), Expect = 2.7
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL-GIAQHPKLHLVEYD 186
++ +TG G ++L +LLLE GY V GT R + L G A+ +L L + D
Sbjct: 29 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAE--RLILCKAD 86
Query: 187 LTDLSSSVRLLE 222
L D + R ++
Sbjct: 87 LLDYDAICRAVQ 98
>gi|3242328|emb|CAA66707| (X98083) cinnamoyl-CoA reductase [Zea
mays]
Length = 371
Score = 33.6 bits (75), Expect = 2.7
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL-GIAQHPKLHLVEYD 186
++ +TG G ++L +LLLE GY V GT R + L G A+ +L L + D
Sbjct: 29 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLRALDGAAE--RLILCKAD 86
Query: 187 LTDLSSSVRLLE 222
L D + R ++
Sbjct: 87 LLDYDAICRAVQ 98
>gi|2058311|emb|CAA56103| (X79566) cinnamoyl-CoA reductase
[Eucalyptus gunnii]
Length = 336
Score = 33.6 bits (75), Expect = 2.7
Identities = 22/65 (33%), Positives = 32/65 (48%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
++ +TG G +++ +LLLE GY V GT R + EL A +L L + DL
Sbjct: 11 QTVCVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDPKNGHLRELEGASE-RLTLYKGDL 69
Query: 190 TDLSS 204
D S
Sbjct: 70 MDYGS 74
>gi|3341511|emb|CAA13176| (AJ231134) cinnamoyl-CoA reductase
[Saccharum officinarum]
Length = 372
Score = 33.6 bits (75), Expect = 2.7
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL-GIAQHPKLHLVEYD 186
++ +TG G ++L +LLLE GY V GT R + L G A+ +L L + D
Sbjct: 29 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAE--RLILCKAD 86
Query: 187 LTDLSSSVRLLE 222
L D + R ++
Sbjct: 87 LLDYDAICRAVQ 98
>gi|2127363|pir||I40869 ORF4 - Clostridium perfringens (fragment)
>gi|853810|emb|CAA60799| (X87369) ORF4 [Clostridium
perfringens]
Length = 190
Score = 33.2 bits (74), Expect = 3.6
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Frame = +1
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-----FWRINELGIAQHPK 165
M K +ITG + G A+LLLE G++VY T RR ++ +I L +
Sbjct: 1 MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERA 60
Query: 166 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 345
+ V + + S + ++ Y A + V+ D D+ G +++A+
Sbjct: 61 VQKVVNTIIRMESRI---DVVFANSXY-ACAGALETVNIDDAKEEFDVNLFGVARVIKAV 116
Query: 346 RIVNPKIRF-YQASTSEMFGKVQQTPQIEETPFYPRSPYGI 465
K ++ Y TS + G + TP + FYP S + +
Sbjct: 117 MPQMRKQKYGYIIVTSSLVG-IVSTPMMS---FYPASKHAL 153
>gi|5924379|gb|AAD56579.1|AF184272_1 (AF184272) dihydroflavonol
4-reductase like [Daucus carota]
Length = 332
Score = 32.8 bits (73), Expect = 4.7
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 7 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYR 105
NK+ +TG +G G++L + LLE GY V T R
Sbjct: 2 NKTVCVTGASGYIGSWLVKTLLERGYHVRATVR 34
>gi|6503293|gb|AAF14669.1|AC011713_17 (AC011713) Similar to
gb|X98083 cinnamoyl-CoA reductase from Zea mays. ESTs
gb|Z24528 and gb|AI996461 come from this gene.
[Arabidopsis thaliana]
Length = 332
Score = 32.8 bits (73), Expect = 4.7
Identities = 22/62 (35%), Positives = 31/62 (49%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
K +TG G +++ +LLLE GY V GT R + + EL A+ +L L DL
Sbjct: 6 KLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKE-RLTLHSADL 64
Query: 190 TD 195
D
Sbjct: 65 LD 66
>gi|6587801|gb|AAF18492.1|AC010924_5 (AC010924) Strong similarity to
cinnamoyl CoA reductase gi|2960364 from Populus
balsamifera. ESTs gb|N95902, gb|AI992693, gb|AI995837
come from this gene. [Arabidopsis thaliana]
Length = 344
Score = 32.8 bits (73), Expect = 4.7
Identities = 20/62 (32%), Positives = 31/62 (49%)
Frame = +1
Query: 10 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 189
K+ +TG G +++ ++LLE GY V GT R + EL + +L L + DL
Sbjct: 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKE-RLILCKADL 69
Query: 190 TD 195
D
Sbjct: 70 QD 71
Database: nr
Posted date: Jan 18, 2000 12:56 PM
Number of letters in database: 136,619,797
Number of sequences in database: 443,958
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 271012913
Number of Sequences: 443958
Number of extensions: 5970728
Number of successful extensions: 15713
Number of sequences better than 10.0: 439
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 15358
Number of HSP's gapped (non-prelim): 288
length of query: 347
length of database: 136,619,797
effective HSP length: 55
effective length of query: 291
effective length of database: 112,202,107
effective search space: 32650813137
effective search space used: 32650813137
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 70 (31.7 bits)