BLASTX 2.0.10 [Aug-26-1999]
Query= XF-05G02-GL10
(783 letters)
Database: nr
443,958 sequences; 136,619,797 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|1176481|sp|P39408|YJJV_ECOLI HYPOTHETICAL 28.9 KD PROTEIN IN... 148 4e-35
gi|586875|sp|P37545|YABD_BACSU HYPOTHETICAL 29.2 KD PROTEIN IN ... 145 4e-34
gi|1361153|pir||S56602 hypothetical protein o211 - Escherichia ... 132 2e-30
gi|4981188|gb|AAD35749.1|AE001739_12 (AE001739) conserved hypot... 129 4e-29
gi|2507509|sp|P37346|YCFH_ECOLI HYPOTHETICAL 29.8 KD PROTEIN IN... 127 1e-28
gi|5853057|gb|AAD54294.1| (AF174390) HI0454 [Haemophilus influe... 125 5e-28
gi|1175659|sp|P44718|YCFH_HAEIN HYPOTHETICAL PROTEIN HI0454 >gi... 123 2e-27
gi|1176482|sp|P44500|YJJV_HAEIN HYPOTHETICAL PROTEIN HI0081 >gi... 120 2e-26
gi|2501548|sp|P73335|YH86_SYNY3 HYPOTHETICAL 29.3 KD PROTEIN SL... 117 1e-25
gi|2984285 (AE000770) hypothetical protein [Aquifex aeolicus] 116 2e-25
gi|3861219|emb|CAA15119| (AJ235272) unknown [Rickettsia prowaze... 113 1e-24
gi|6017102|gb|AAF01585.1|AC009895_6 (AC009895) unknown protein ... 112 4e-24
gi|2621281 (AE000810) conserved protein [Methanobacterium therm... 107 1e-22
gi|6457812|gb|AAF09734.1|AE001877_1 (AE001877) conserved hypoth... 106 2e-22
gi|2688073 (AE001129) conserved hypothetical protein [Borrelia ... 103 2e-21
gi|4377097|gb|AAD18925| (AE001660) PHP superfamily (urease/pyri... 98 7e-20
gi|2314758|gb|AAD08613.1| (AE000655) conserved hypothetical pro... 97 1e-19
gi|3329038|gb|AAC68196.1| (AE001330) PHP superfamily hydrolase ... 96 4e-19
gi|4156101 (AE001569) putative [Helicobacter pylori J99] 95 8e-19
gi|2662576 (AF036694) No definition line found [Caenorhabditis ... 95 8e-19
gi|5458485|emb|CAB49973.1| (AJ248286) hypothetical protein [Pyr... 92 5e-18
gi|2052145|emb|CAB08135| (Z94752) hypothetical protein Rv1008 [... 92 5e-18
gi|3323301 (AE001265) conserved hypothetical protein [Treponema... 91 9e-18
gi|549588|sp|P27859|YIGW_ECOLI HYPOTHETICAL 29.6 KD PROTEIN IN ... 90 1e-17
gi|3193220 (AF067848) MttC [Escherichia coli] 90 1e-17
gi|3257625|dbj|BAA30308| (AP000005) 250aa long hypothetical pro... 82 4e-15
gi|6138836|emb|CAB59647.1| (AL132674) hypothetical protein SCE8... 80 2e-14
gi|3915472|sp|Q58977|YF82_METJA HYPOTHETICAL PROTEIN MJ1582 >gi... 78 6e-14
gi|3323320 (AE001267) conserved hypothetical protein [Treponema... 76 3e-13
gi|2501546|sp|Q93075|Y218_HUMAN HYPOTHETICAL PROTEIN KIAA0218 >... 75 9e-13
gi|1729438|emb|CAA69984| (Y08729) hypothetical protein [Acidian... 73 2e-12
gi|1351455|sp|P47255|Y009_MYCGE HYPOTHETICAL PROTEIN MG009 >gi|... 72 5e-12
gi|2501547|sp|P78005|Y009_MYCPN HYPOTHETICAL PROTEIN MG009 HOMO... 69 5e-11
gi|1707143 (U80836) B0432.8 gene product [Caenorhabditis elegans] 65 8e-10
gi|2257524|dbj|BAA21418| (AB004537) HYPOTHETICAL 47.4KD PROTEIN... 63 3e-09
gi|5679727|emb|CAB51767.1| (AL109652) hypothetical protein [Sch... 63 3e-09
gi|4886288|emb|CAB43446.1| (AL050300) putative protein [Arabido... 61 1e-08
gi|1176064|sp|P45305|YG64_HAEIN HYPOTHETICAL PROTEIN HI1664 60 3e-08
gi|1074887|pir||E64174 hypothetical protein HI1664 - Haemophilu... 60 3e-08
gi|6425283|emb|CAB60573.1| (AL132863) Y37H2A.1 [Caenorhabditis ... 58 1e-07
gi|6425289|emb|CAB60325.1| (AL110480) Y24F12A.1 [Caenorhabditis... 56 4e-07
gi|1790274 (AE000459) orf, hypothetical protein [Escherichia coli] 55 9e-07
gi|5104065|dbj|BAA79381.1| (AP000059) 252aa long hypothetical p... 54 1e-06
gi|421091|pir||S30730 hypothetical protein o206 - Escherichia c... 54 1e-06
gi|6460974|gb|AAF12677.1|AE001827_15 (AE001827) conserved hypot... 53 2e-06
gi|148240 (M87049) o113 [Escherichia coli] >gi|1790275 (AE00045... 53 3e-06
gi|421078|pir||S30731 hypothetical protein o113 - Escherichia coli 53 3e-06
gi|6594244|emb|CAB63556.1| (AL031746) conserved hypothetical pr... 46 3e-04
gi|2833570|sp|Q58171|Y761_METJA HYPOTHETICAL PROTEIN MJ0761 >gi... 44 0.002
gi|2622977 (AE000937) conserved protein [Methanobacterium therm... 43 0.003
gi|6319416|ref|NP_009498.1|YBL055C| Ybl055cp >gi|465514|sp|P342... 39 0.034
gi|3219993|sp|Q58778|YD83_METJA HYPOTHETICAL PROTEIN MJ1383 PRE... 38 0.13
gi|6580328|emb|CAB63397.1| (AL032652) Y63D3A.3 [Caenorhabditis ... 36 0.38
gi|173197 (M88172) ORF3 [Saccharomyces cerevisiae] 36 0.50
gi|6323918|ref|NP_013989.1|YMR262W| Ymr262wp >gi|1730605|sp|P38... 35 0.66
gi|4490986|emb|CAB38883.1| (AL035707) hypothetical protein [Str... 35 0.66
gi|1653166|dbj|BAA18082| (D90911) hypothetical protein [Synecho... 32 4.4
gi|2500548|sp|Q17632|DIS3_CAEEL DIS3 PROTEIN HOMOLOG >gi|387390... 32 4.4
>gi|1176481|sp|P39408|YJJV_ECOLI HYPOTHETICAL 28.9 KD PROTEIN IN
OSMY-DEOC INTERGENIC REGION
Length = 259
Score = 148 bits (371), Expect = 4e-35
Identities = 87/250 (34%), Positives = 125/250 (49%), Gaps = 3/250 (1%)
Frame = +1
Query: 16 IDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAYGL 195
ID+HCH D F GD A + ++ + LY A GL
Sbjct: 6 IDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGL 65
Query: 196 HPMFLTEHHPTHLHALRDWLEHE--RPCAIGECGLDFYLEGLNREMQHTYFIRQLMLARE 369
HP L +H L L+ LE + A+GE GLD + + E Q QL LA+
Sbjct: 66 HPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKR 125
Query: 370 YALPVIVHARHAVEEVIASIKTVGTLR-GVVHSFSGSLEQARQLWKLGFMISLGGAMTYP 546
Y LPVI+H+R +++ +K R GVVH FSGSL+QA + +LG+ I +GG +TYP
Sbjct: 126 YDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYP 185
Query: 547 RAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTEIS 726
RA + + + PL LLLETDAP P + +G+ N P + + + LR++ EI+
Sbjct: 186 RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIA 245
Query: 727 KVTRANTEQLFGL 765
+ NT LF +
Sbjct: 246 QALLNNTYTLFNV 258
>gi|586875|sp|P37545|YABD_BACSU HYPOTHETICAL 29.2 KD PROTEIN IN
METS-KSGA INTERGENIC REGION >gi|2127033|pir||S66068
hypothetical protein - Bacillus subtilis
>gi|467428|dbj|BAA05274| (D26185) unknown [Bacillus
subtilis] >gi|2632306|emb|CAB11815| (Z99104) similar to
hypothetical proteins [Bacillus subtilis]
Length = 255
Score = 145 bits (362), Expect = 4e-34
Identities = 79/250 (31%), Positives = 130/250 (51%), Gaps = 2/250 (0%)
Frame = +1
Query: 10 VLIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAY 189
+L D+H HL+A+ +D D + + + +Y A
Sbjct: 1 MLFDTHAHLNAEQYDTDLEEVIERAKAEKVERIVVVGFDRPTITRAMEMIEEYDFIYAAI 60
Query: 190 GLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQLMLARE 369
G HP+ + L +++ HE+ AIGE GLD++ + +++Q F Q+ LA+E
Sbjct: 61 GWHPVDAIDMTEEDLAWIKELSAHEKVVAIGEMGLDYHWDKSPKDIQKEVFRNQIALAKE 120
Query: 370 YALPVIVHARHAVEEVIASIKTVGT--LRGVVHSFSGSLEQARQLWKLGFMISLGGAMTY 543
LP+I+H R A E+V+ +K G + G++H F+GS E AR+ K+ F +S GG +T+
Sbjct: 121 VNLPIIIHNRDATEDVVTILKEEGAEAVGGIMHCFTGSAEVARECMKMNFYLSFGGPVTF 180
Query: 544 PRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTEI 723
A + ++ E P D LL+ETD P+ RGKRNEP + + + IA L++ EI
Sbjct: 181 KNAKKPKEVVKEIPNDRLLIETDCPFLTPHPFRGKRNEPSYVKYVAEQIAELKEMTFEEI 240
Query: 724 SKVTRANTEQLF 759
+ +T N ++LF
Sbjct: 241 ASITTENAKRLF 252
>gi|1361153|pir||S56602 hypothetical protein o211 - Escherichia coli
>gi|537218 (U14003) ORF_o211 [Escherichia coli]
>gi|1790838 (AE000508) orf, hypothetical protein
[Escherichia coli]
Length = 211
Score = 132 bits (330), Expect = 2e-30
Identities = 77/197 (39%), Positives = 110/197 (55%), Gaps = 3/197 (1%)
Frame = +1
Query: 175 LYPAYGLHPMFLTEHHPTHLHALRDWLEHE--RPCAIGECGLDFYLEGLNREMQHTYFIR 348
LY A GLHP L +H L L+ LE + A+GE GLD + + E Q
Sbjct: 11 LYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDE 70
Query: 349 QLMLAREYALPVIVHARHAVEEVIASIKTVGTLR-GVVHSFSGSLEQARQLWKLGFMISL 525
QL LA+ Y LPVI+H+R +++ +K R GVVH FSGSL+QA + +LG+ I +
Sbjct: 71 QLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGV 130
Query: 526 GGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRK 705
GG +TYPRA + + + PL LLLETDAP P + +G+ N P + + + LR+
Sbjct: 131 GGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRR 190
Query: 706 QDRTEISKVTRANTEQLFGL 765
+ EI++ NT LF +
Sbjct: 191 EPADEIAQALLNNTYTLFNV 210
>gi|4981188|gb|AAD35749.1|AE001739_12 (AE001739) conserved
hypothetical protein [Thermotoga maritima]
Length = 256
Score = 129 bits (320), Expect = 4e-29
Identities = 72/249 (28%), Positives = 120/249 (47%), Gaps = 2/249 (0%)
Frame = +1
Query: 13 LIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAYG 192
++D+H HL FD D K + + ++ + G
Sbjct: 1 MVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGVNLEDSKKSLDLSKTSDRIFCSVG 60
Query: 193 LHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQLMLAREY 372
+HP E + L + + E+ AIGE GLDF+ E+Q F+ Q+ LA +
Sbjct: 61 VHPHDAKEVPEDFIEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKL 120
Query: 373 ALPVIVHARHAVEEVIASIKT--VGTLRGVVHSFSGSLEQARQLWKLGFMISLGGAMTYP 546
LP++VH R A E ++T + RGV+H+FS E A++ LGF++ +GG +TYP
Sbjct: 121 NLPLVVHIRDAYSEAYEILRTESLPEKRGVIHAFSSDYEWAKKFIDLGFLLGIGGPVTYP 180
Query: 547 RAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTEIS 726
+ L ++ L+ ++LETD P+ P RGKRNEP L +++ I+ + ++
Sbjct: 181 KNEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQVLGVPEAKVD 240
Query: 727 KVTRANTEQLF 759
+ T N ++F
Sbjct: 241 EATTENARRIF 251
>gi|2507509|sp|P37346|YCFH_ECOLI HYPOTHETICAL 29.8 KD PROTEIN IN
HOLB-PTSG INTERGENIC REGION >gi|1787342 (AE000210) orf,
hypothetical protein [Escherichia coli]
>gi|4062666|dbj|BAA35907| (D90745) Hypothetical protein
in holB 3'region . [Escherichia coli]
Length = 265
Score = 127 bits (316), Expect = 1e-28
Identities = 81/249 (32%), Positives = 121/249 (48%), Gaps = 5/249 (2%)
Frame = +1
Query: 13 LIDSHCHLDA---DAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYP 183
L+DSHCHLD ++ D T + +R + + +
Sbjct: 3 LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVF 62
Query: 184 AYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQLMLA 363
+ G+HP L ++ P + LR E A+GE GLD+Y + Q FI + +
Sbjct: 63 SCGVHP--LNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIG 120
Query: 364 REYALPVIVHARHAVEEVIASIKT--VGTLRGVVHSFSGSLEQARQLWKLGFMISLGGAM 537
RE PVIVH R A + +A ++ V GV+H F+ E A +L LGF IS G +
Sbjct: 121 RELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIV 180
Query: 538 TYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRT 717
T+ A +L A PLD LL+ETD+PY RGK N+P + + +Y+A L+
Sbjct: 181 TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVE 240
Query: 718 EISKVTRANTEQLF 759
E+++VT N +LF
Sbjct: 241 ELAQVTTDNFARLF 254
>gi|5853057|gb|AAD54294.1| (AF174390) HI0454 [Haemophilus
influenzae]
Length = 260
Score = 125 bits (310), Expect = 5e-28
Identities = 74/253 (29%), Positives = 127/253 (49%), Gaps = 5/253 (1%)
Frame = +1
Query: 13 LIDSHCHLDADAFDG---DXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYP 183
++DSHCHLDA ++ + T +++ + + + +
Sbjct: 3 IVDSHCHLDALDYENLHKNISDVVEKAHARDVKHLLAIGVTLSRFEQAYDSLREFNNVSL 62
Query: 184 AYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQLMLA 363
A G+HP+ E P L + + AIGE GLD+Y N+ Q F Q+ +A
Sbjct: 63 ACGVHPLDF-EEEPYDAERLLRLAQDPKVIAIGEIGLDYYYSADNKAAQQAVFGSQIDIA 121
Query: 364 REYALPVIVHARHAVEEVIASIKTVGTLR--GVVHSFSGSLEQARQLWKLGFMISLGGAM 537
+ PVI+H R A ++ IA ++ + GV+H F+ ++E A++ LGF IS G +
Sbjct: 122 NQLDKPVIIHTRSAGDDTIAMLRQHRAEKCGGVIHCFTETMEFAKKALDLGFYISCSGIV 181
Query: 538 TYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRT 717
T+ A + ++ P++ LL+ETD+PY RGK N+P + +Y+ATL+
Sbjct: 182 TFKNAEAIREVIRYVPMERLLVETDSPYLAPVPYRGKENQPAYTREVCEYVATLKGVSAE 241
Query: 718 EISKVTRANTEQLFGLKV 771
+++T N E+LF ++V
Sbjct: 242 AFAQITTQNFERLFKIRV 259
>gi|1175659|sp|P44718|YCFH_HAEIN HYPOTHETICAL PROTEIN HI0454
>gi|1074410|pir||I64152 hypothetical protein HI0454 -
Haemophilus influenzae (strain Rd KW20) >gi|1573428
(U32728) conserved hypothetical protein [Haemophilus
influenzae Rd]
Length = 260
Score = 123 bits (306), Expect = 2e-27
Identities = 73/253 (28%), Positives = 126/253 (48%), Gaps = 5/253 (1%)
Frame = +1
Query: 13 LIDSHCHLDADAFDG---DXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYP 183
++DSHCHLDA ++ + T +++ + + + +
Sbjct: 3 IVDSHCHLDALDYENLHKNISDVVEKAHARDVKHLLAIGVTLSRFEQAYDSLREFNNVSL 62
Query: 184 AYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQLMLA 363
A G+HP+ E P L + + AIGE GLD+Y N+ Q F Q+ +A
Sbjct: 63 ACGVHPLDF-EEEPYDAERLLRLAQDPKVIAIGEIGLDYYYSADNKAAQQAVFGSQIDIA 121
Query: 364 REYALPVIVHARHAVEEVIASIKTVGTLR--GVVHSFSGSLEQARQLWKLGFMISLGGAM 537
+ PVI+H R A ++ IA ++ + GV+H F+ ++E ++ LGF IS G +
Sbjct: 122 NQLDKPVIIHTRSAGDDTIAMLRQHRAEKCGGVIHCFTETMEFXKKALDLGFYISCSGIV 181
Query: 538 TYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRT 717
T+ A + ++ P++ LL+ETD+PY RGK N+P + +Y+ATL+
Sbjct: 182 TFKNAEAIREVIRYVPMERLLVETDSPYLAPVPYRGKENQPAYTREVCEYVATLKGVSAE 241
Query: 718 EISKVTRANTEQLFGLKV 771
+++T N E+LF ++V
Sbjct: 242 AFAQITTQNFERLFKIRV 259
>gi|1176482|sp|P44500|YJJV_HAEIN HYPOTHETICAL PROTEIN HI0081
>gi|1074249|pir||A64142 hypothetical protein HI0081 -
Haemophilus influenzae (strain Rd KW20) >gi|1573029
(U32693) conserved hypothetical protein [Haemophilus
influenzae Rd]
Length = 262
Score = 120 bits (297), Expect = 2e-26
Identities = 77/211 (36%), Positives = 121/211 (56%), Gaps = 12/211 (5%)
Frame = +1
Query: 127 AAKWPKLRTICTQTSGLYP-----AYGLHPMFLTEHHPTHLHALRDWLEH-ERPC-AIGE 285
A K +TI T+ L+P GLHP+++ EH L L L++ + C A+ E
Sbjct: 40 AVKEADFKTIQNMTA-LFPDNLCYGLGLHPLYIQEHAENDLILLEQALKNRDTNCTAVAE 98
Query: 286 CGLDFYLEGLNRE----MQHTYFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLR- 450
GL+ + L + Q +F QL LA+++ LPV +H+R +++ +K + +
Sbjct: 99 IGLERAIPDLLTDELWAKQCHFFESQLYLAKQFNLPVNIHSRKTHDQIFTFLKRIPLSKL 158
Query: 451 GVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPD 630
GVVH FSGS +QA++ LG+ I +GG +TY RA++ Q + PLD L+LETD+P P
Sbjct: 159 GVVHGFSGSYDQAKRFVDLGYKIGVGGTITYERANKTRQAIAKLPLDALVLETDSPDMPV 218
Query: 631 SEIRGKRNEPGRLLTILDYIATLRKQDRTEISKVTRANTEQLF 759
+G+ N P R++ + TLR + I K+T N Q+F
Sbjct: 219 FGFQGQPNRPERIVESFKALCTLRNEPAELIKKLTWENACQIF 261
>gi|2501548|sp|P73335|YH86_SYNY3 HYPOTHETICAL 29.3 KD PROTEIN
SLL1786 >gi|1652444|dbj|BAA17366| (D90905) hypothetical
protein [Synechocystis sp.]
Length = 261
Score = 117 bits (290), Expect = 1e-25
Identities = 78/253 (30%), Positives = 124/253 (48%), Gaps = 5/253 (1%)
Frame = +1
Query: 13 LIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAYG 192
L+D+H H++ D F D ++ +++++ + L+ A G
Sbjct: 3 LVDTHVHINFDVFAADLDQLQHRWRQAGVVQLVHSCVKPQEFDQIQSLADRFPELFFAVG 62
Query: 193 LHPMFLTEHHPTHLHALRDWLE-HERPCAIGECGLDFYLEGLNREMQHTYFIRQLMLARE 369
LHP+ + + + + +R AIGE GLDF+ + NR+ Q F QL +ARE
Sbjct: 63 LHPLDAEDWQDNTAGQILAYAKADDRVVAIGEMGLDFF-KADNRDHQIEVFRAQLAIARE 121
Query: 370 YALPVIVHARHAVE---EVIASIKTV-GTLRGVVHSFSGSLEQARQLWKLGFMISLGGAM 537
PVI+H R A + +V+ + G + GV+H + G+ E+ + LGF IS G +
Sbjct: 122 LNKPVIIHCRDAAQTMRQVLTDFQAESGPVAGVMHCWGGTPEETQWFLDLGFYISFSGTV 181
Query: 538 TYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRT 717
T+ +A + A P D LL+ETD P+ RGKRNEP + + + IA LR
Sbjct: 182 TFKKAEGIQASAQMVPPDRLLVETDCPFLAPVPQRGKRNEPAFVRHVAEAIAALRHVPLE 241
Query: 718 EISKVTRANTEQLFGLKV 771
+++ T N LF L V
Sbjct: 242 TLAQQTTTNARNLFKLPV 259
>gi|2984285 (AE000770) hypothetical protein [Aquifex aeolicus]
Length = 454
Score = 116 bits (289), Expect = 2e-25
Identities = 82/251 (32%), Positives = 121/251 (47%), Gaps = 15/251 (5%)
Frame = +1
Query: 13 LIDSHCHLDA-------DAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTS 171
+ID+HCHLD +AF D A + K+
Sbjct: 1 MIDTHCHLDLLKKEDREEAFK-DERLEYLINVGFDRKTIKNAIEFAKNYDKV-------- 51
Query: 172 GLYPAYGLHPMFLTEHHPTHLHALRDWL-----EHERPCAIGECGLDFYLEGLNREMQHT 336
Y A G HP + L DWL E+ + AIGE GLDFY +++ Q
Sbjct: 52 --YIAIGFHPHEADKVTDKDL----DWLKKLAEENPKVRAIGEIGLDFYKNYSDKKKQEE 105
Query: 337 YFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLR--GVVHSFSGSLEQARQLWKLG 510
F +Q+ +A+E LPV++H R A EE I ++ G GV+H F+GS E ++ +G
Sbjct: 106 IFRKQIQIAKELGLPVVIHMRDAEEETIRILREEGAYEVGGVMHCFTGSYETMKKAVDMG 165
Query: 511 FMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYI 690
F IS G +TY A + ++A TP +LLETD+P+ +RGK N+P + +
Sbjct: 166 FFISYSGILTYKNAESVREVAKRTPTSRILLETDSPFLAPEPVRGKPNKPTNIFYTAQVL 225
Query: 691 ATLRKQDRTE-ISKVTRANTEQLFGL 765
A L E + ++T N + F L
Sbjct: 226 AELLPNTSLEDVDRMTTQNAKLAFNL 251
>gi|3861219|emb|CAA15119| (AJ235272) unknown [Rickettsia prowazekii]
Length = 293
Score = 113 bits (281), Expect = 1e-24
Identities = 66/207 (31%), Positives = 110/207 (52%), Gaps = 5/207 (2%)
Frame = +1
Query: 139 PKLRTICTQTSGLYPAYGLHPMFLTEHHP--THLHALRDWLEHERPCAIGECGLDFYLEG 312
P + I Q ++ + G+HP + + T L + + H++ IGE GLD+Y +
Sbjct: 73 PIVLKIAEQYKNVFASVGVHPCEVNDKKRLITDLEII-ELTNHQKIIGIGETGLDYYHQP 131
Query: 313 LNREMQHTYFIRQLMLAREYALPVIVHARHAVEEVIASIKTV---GTLRGVVHSFSGSLE 483
N+++Q FI + A LP+IVH R A E+ I + + G++H F+ S
Sbjct: 132 YNKKLQRDSFIAHISAASATNLPIIVHTREADEDTIDILTSAMHNSKFSGLIHCFASSKN 191
Query: 484 QARQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPG 663
A ++ +G IS+ G +T+ A L ++ PLD LL+ETD+PY + +RGK+NEP
Sbjct: 192 LAAKMLDIGLYISVSGIITFKNATNLQEIVKYIPLDRLLIETDSPYLAPTPMRGKQNEPA 251
Query: 664 RLLTILDYIATLRKQDRTEISKVTRANTEQLF 759
+ + + +A L+ E+ VT N + LF
Sbjct: 252 FVRYVAEKVAELKNITSQEVENVTTHNFKILF 283
>gi|6017102|gb|AAF01585.1|AC009895_6 (AC009895) unknown protein
[Arabidopsis thaliana]
Length = 272
Score = 112 bits (277), Expect = 4e-24
Identities = 72/249 (28%), Positives = 116/249 (45%), Gaps = 10/249 (4%)
Frame = +1
Query: 13 LIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAYG 192
L D+HCHL + W ++ + + P +G
Sbjct: 3 LFDAHCHLQDKRVIDKASQLISAALAVGVTNFAVNGTSEKDWNLVKEMGETYPSVVPCFG 62
Query: 193 LHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDF--YLEGLNREMQHTYFIRQLMLAR 366
LHP F+ + P L+ + E A+GE GLD G++ Q F QL LA+
Sbjct: 63 LHPWFIADRSPHWFKTLKKFFETTPTAAVGEIGLDKGPLAGGIDYSDQLVVFRPQLELAK 122
Query: 367 EYALPVIVHARHAVEEVIASIKTVGTLRG--VVHSFSGSLEQARQLWKLGFMISLGGAMT 540
E PV VH A ++++ ++++G ++HSF+GS E +L +LG S G T
Sbjct: 123 ELNKPVAVHCIDAFDDLLEIMRSIGPFPAGVILHSFNGSAEVVPKLAELGAYFSFSGWFT 182
Query: 541 YPRAHRLHQLAMETPLDCLLLETDAP------YQPDSEIRGKRNEPGRLLTILDYIATLR 702
Y + P D LLLETD+P + S+ + NEP +L +LDY+A L
Sbjct: 183 YIDEKIAKKTLKSIPSDRLLLETDSPDGLPKSDESSSDPKPTLNEPANILAVLDYVANLS 242
Query: 703 KQDRTEISKVTRANTEQLF 759
+ E+++++ N+ +LF
Sbjct: 243 NMKKEELAELSYVNSVRLF 261
>gi|2621281 (AE000810) conserved protein [Methanobacterium
thermoautotrophicum]
Length = 256
Score = 107 bits (264), Expect = 1e-22
Identities = 70/253 (27%), Positives = 117/253 (45%), Gaps = 4/253 (1%)
Frame = +1
Query: 7 VVLIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPA 186
+++ID HCHLD F+ + L + P
Sbjct: 4 IIIIDVHCHLDFKDFNRNREEVIERARSKLRAVIDSGVGLGGNRRALELASLNPGFICPT 63
Query: 187 YGLHPMFLTEHHPTHLHALRDWLEH--ERPCAIGECGLDFY--LEGLNREMQHTYFIRQL 354
G HP+ ++ + + +E + A+GE G+DF+ + R Q F +
Sbjct: 64 MGFHPVDASKARQDLIGEVVSQIESNIDLIVAVGETGMDFHHTRDEEGRRRQEETFRVFV 123
Query: 355 MLAREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFMISLGGA 534
LA E+ +P++VHAR A E + ++ + H + GS+E AR++ G+ IS+
Sbjct: 124 ELAAEHEMPLVVHARDAEERALETVLEYRVPEVIFHCYGGSIETARRILDEGYYISISTL 183
Query: 535 MTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDR 714
+ + H +L PL+ +L ETD+PY S RGKRNEP + + IA ++ D
Sbjct: 184 VAFSEHHM--ELVRAIPLEGMLTETDSPYL--SPFRGKRNEPAFVEEAVRAIARIKDMDL 239
Query: 715 TEISKVTRANTEQLFGL 765
++ +T AN E++FGL
Sbjct: 240 EDVDSITTANAERVFGL 256
>gi|6457812|gb|AAF09734.1|AE001877_1 (AE001877) conserved
hypothetical protein [Deinococcus radiodurans]
Length = 262
Score = 106 bits (263), Expect = 2e-22
Identities = 68/204 (33%), Positives = 98/204 (47%), Gaps = 6/204 (2%)
Frame = +1
Query: 154 ICTQTSGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQH 333
+ Q ++ GLHP + E P A+ L+H R IGE GLD Y R Q
Sbjct: 53 LAEQFGDVWATVGLHPGDVEEDSPDTRAAIEALLDHPRVVGIGESGLDDYWNDTQRPAQL 112
Query: 334 TYFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLRG------VVHSFSGSLEQARQ 495
F QL LAR P+++H R + A + TLR ++H F+G
Sbjct: 113 AAFEWQLELARRSGKPLVIHTRDKPGQDSAHRGVIETLRDWPDVQVILHCFTGHAGLLAC 172
Query: 496 LWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLT 675
+ G G +TY A + A + PLD LL+ETDAP+ RGK N PG +
Sbjct: 173 GLERGAYFGFAGNVTYKNAVEIQAAAQQVPLDRLLVETDAPFLAPVPKRGKPNRPGYVRY 232
Query: 676 ILDYIATLRKQDRTEISKVTRANTEQLFGL 765
LD++A LR + E+ +VT N +++G+
Sbjct: 233 TLDFVAGLRGLNPAELERVTDENARRVYGI 262
>gi|2688073 (AE001129) conserved hypothetical protein [Borrelia
burgdorferi]
Length = 269
Score = 103 bits (254), Expect = 2e-21
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 1/164 (0%)
Frame = +1
Query: 169 SGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIR 348
S ++ G+HP+ L++H + L L E A+GE GLD Y + N++ Q
Sbjct: 70 SNVFLTAGIHPLNLSDHFKDDIKQLEKILISENVVAVGEMGLD-YFKADNKKFQIKALEE 128
Query: 349 QLMLAREYALPVIVHARHAVEEVIASIKTVGTL-RGVVHSFSGSLEQARQLWKLGFMISL 525
QL LA +Y PVI+H R A ++V ++++ L RG++H +SG+ E A++ LGF +S
Sbjct: 129 QLYLADKYKRPVILHIRDAYDDVYNIVRSLNFLNRGILHCYSGTYEHAKKFIDLGFKVSF 188
Query: 526 GGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEP 660
G +T+ A L L + ++ LL+ETD+P+ +RGK N P
Sbjct: 189 SGNITFKNAQPLRILVGKLNINDLLIETDSPFLAPVPLRGKINSP 233
>gi|4377097|gb|AAD18925| (AE001660) PHP superfamily
(urease/pyrimidinase) hydrolase [Chlamydia pneumoniae]
Length = 261
Score = 98.3 bits (241), Expect = 7e-20
Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 18/244 (7%)
Frame = +1
Query: 13 LIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXT----------AAKWPKLRTICT 162
L D+H HL DAF+ D T A ++PK+R
Sbjct: 3 LADAHVHLSDDAFEEDINSVLQRAQDSGVSLVVNVTTTEKELNRSFAYAERFPKIRFCHV 62
Query: 163 QTSGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYL---EGLNREMQH 333
G P + ++ H A ++ AIGE GLD+ EG+ R+ +
Sbjct: 63 ---GGTPPQDVDQDIEEDYRNFHAAA-----HSKKLAAIGEVGLDYCFATEEGIARQKE- 113
Query: 334 TYFIRQLMLAREYALPVIVHARHAVEEVIASIKTV-----GTLRGVVHSFSGSLEQARQL 498
R L L+ E LP++VH R A + + + G++H F+G+LE+A++L
Sbjct: 114 -VLQRYLALSLECELPLVVHCRGAFNDFFRMLDQYYHNDPRSRPGMLHCFTGTLEEAQEL 172
Query: 499 WKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTI 678
G+ IS+ G +T+ A L L +E PL+ LL+ETDAP+ RGK+NEP +L
Sbjct: 173 ISRGWFISISGIVTFKNAQDLRDLVVELPLEHLLIETDAPFLAPVPYRGKKNEPAHVLHT 232
Query: 679 LDYIATLRKQDRTEISKVTRAN 744
++ +A ++ E++ + N
Sbjct: 233 INAVANVKGMFPQELAALAYKN 254
>gi|2314758|gb|AAD08613.1| (AE000655) conserved hypothetical protein
[Helicobacter pylori 26695]
Length = 254
Score = 97.1 bits (238), Expect = 1e-19
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 8/250 (3%)
Frame = +1
Query: 10 VLIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAY 189
+ ID+HCHLD ++ D + I + G++ A
Sbjct: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
Query: 190 GLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFY-LEGLN-----REMQHTYFIRQ 351
G HP + + ++ H++ AIGECGLD+Y L LN + Q F +Q
Sbjct: 61 GAHPYDVESFDES---LFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
Query: 352 LMLAREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLG--FMISL 525
+ + ++ P+I+H R A + + +K GV+H F+ L +L F +
Sbjct: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNAD----GMLLELSDRFYYGI 173
Query: 526 GGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRK 705
GG T+ A RL ++ + P + LLLETD+PY RG RN P + I IA +
Sbjct: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
Query: 706 QDRTEISKVTRANTEQLF 759
+ E++ ++ N + LF
Sbjct: 234 IETEELASLSTHNAQMLF 251
>gi|3329038|gb|AAC68196.1| (AE001330) PHP superfamily hydrolase
[Chlamydia trachomatis]
Length = 263
Score = 95.6 bits (234), Expect = 4e-19
Identities = 73/247 (29%), Positives = 117/247 (46%), Gaps = 13/247 (5%)
Frame = +1
Query: 13 LIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAYG 192
++D+H HL ++ F D T A+ LR+ + YP +
Sbjct: 3 IVDAHVHLSSEEFIEDFGDVVLRGKTAGVTRVVNVTTTKAEL--LRSFAYAEA--YPDWM 58
Query: 193 LHPMFLTEHHPTHLHALRDWLEHERPC------AIGECGLD--FYLEGLNREMQHTYFIR 348
+ + T D+ E R AIGE GLD F ++ +E Q R
Sbjct: 59 FYHVAGTPPQDAQDDIEEDFQEFCRAAEGGKLAAIGEVGLDYLFAVQASEQERQKEVLCR 118
Query: 349 QLMLAREYALPVIVHARHAVEEVIASIKTVGTLR-----GVVHSFSGSLEQARQLWKLGF 513
L LA ++ LP++VH R A E+ + V + G++H F+G+ E+A +L +
Sbjct: 119 YLQLALQHELPLVVHCRGAFEDFFHILDHVYRVDQQAKPGMLHCFTGTYEEATELLARDW 178
Query: 514 MISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIA 693
IS+ G +T+ A L L + L+ LL+ETDAPY + +RGKRNEP ++ L IA
Sbjct: 179 YISISGIVTFKNAKSLQDLVEKISLERLLVETDAPYLAPTPLRGKRNEPANIVHTLARIA 238
Query: 694 TLRKQDRTEISKVTRANTEQ 753
++ E+ N ++
Sbjct: 239 EIKGISVYELQDAVSTNVQR 258
>gi|4156101 (AE001569) putative [Helicobacter pylori J99]
Length = 254
Score = 94.8 bits (232), Expect = 8e-19
Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 8/250 (3%)
Frame = +1
Query: 10 VLIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAY 189
+ ID+HCHLD ++ D + I + G++ A
Sbjct: 1 MFIDTHCHLDHKDYENDLDEVLKESLEKGVTQCVIPGADMKDLNRAVGISEKFEGVFFAI 60
Query: 190 GLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFY-LEGLN-----REMQHTYFIRQ 351
G HP + E L ++ H++ AIGECGLD+Y L L+ + Q F +Q
Sbjct: 61 GAHP-YDVESFDEGL--FEKFVSHQKCVAIGECGLDYYRLPELSERENYKSKQKEIFTKQ 117
Query: 352 LMLAREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLG--FMISL 525
+ + ++ P+I+H R A + + +K+ GV+H F+ L +L F +
Sbjct: 118 IEFSIQHNKPLIIHIREASFDSLNLLKSYPKAFGVLHCFNAD----SMLLELSDRFYYGI 173
Query: 526 GGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRK 705
GG T+ A RL ++ + P + LLLETD+PY RG RN P + I IA +
Sbjct: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIH 233
Query: 706 QDRTEISKVTRANTEQLF 759
+ E++ ++ N + LF
Sbjct: 234 IETEELASLSTHNAQTLF 251
>gi|2662576 (AF036694) No definition line found [Caenorhabditis
elegans]
Length = 286
Score = 94.8 bits (232), Expect = 8e-19
Identities = 63/198 (31%), Positives = 111/198 (55%), Gaps = 28/198 (14%)
Frame = +1
Query: 175 LYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQL 354
LY G+HP + + L AL+ E+ A+GECGLDF +++Q F +Q+
Sbjct: 61 LYFTAGVHPHDAKDWNDGTLEALKKLQENPSCVAVGECGLDFNRNFSPQDVQKEVFAKQV 120
Query: 355 MLAREYALPVIVHARHAVEEVIASIKTVGTL--RGVVHSFSGSLEQARQLWKLGFMISLG 528
+A + P+ +H R A E+++ + G V+H F+G++ +A++ ++GF I L
Sbjct: 121 DMAVKLQKPLFIHEREAHEDMVKILTAAGPSLPPAVIHCFTGTVVEAKKYLEMGFYIGLT 180
Query: 529 GAMTYPRAHRLHQLAM---ETPLDCLLLETDAPYQ------------------PDSEI-- 639
G + R+ Q + E P++ L+LETDAPY P++E
Sbjct: 181 GFLWKDRSDNGVQAGLRSGEIPIEKLVLETDAPYMYPKINDKKIPKEIKSLITPETEALH 240
Query: 640 ---RGKRNEPGRLLTILDYIATLRKQDRTEISKVTRANTEQLFGLK 768
RNEP L + + +A +D E++K+T N ++++ L+
Sbjct: 241 NFSSFNRNEPCSLAAVCELVAAFAGRDPKEVAKITTENAKKVYKLE 286
>gi|5458485|emb|CAB49973.1| (AJ248286) hypothetical protein
[Pyrococcus abyssi]
Length = 253
Score = 92.1 bits (225), Expect = 5e-18
Identities = 65/251 (25%), Positives = 118/251 (46%), Gaps = 4/251 (1%)
Frame = +1
Query: 13 LIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAYG 192
+ID+H HL+ + + W + L+P G
Sbjct: 1 MIDAHAHLEFYKKEAEAIIEKARSRMKAIVDSITEYRKFHVWKSWEMLKPYFGFLFPTLG 60
Query: 193 LHPMFLTEHHPTHLHALRDW-LEHERPC-AIGECGLDFY--LEGLNREMQHTYFIRQLML 360
HP + + + ++ L+H++ AIGE GLD+Y + R Q F L L
Sbjct: 61 YHPNEARRGNWEKVRKVEEFILDHKKEIYAIGEIGLDYYHAKTEVERRNQEEIFRHFLTL 120
Query: 361 AREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFMISLGGAMT 540
A E LPV++HAR A E+V I ++ HS++G ++ AR++ + G + + +T
Sbjct: 121 AEELKLPVVIHAREA-EDVALRILQNFDVKAYFHSYTGPVKVAREIVENGHFVGIVTGIT 179
Query: 541 YPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTE 720
+ + +A L+ +L+ETD+PY S +G +N+P + +++ +A +++ R E
Sbjct: 180 F--IPEVRDVARALELENILVETDSPYM--SPYKGVKNKPWFVEVVINELAKIKEVPREE 235
Query: 721 ISKVTRANTEQLFGL 765
+ +T N + FGL
Sbjct: 236 VEAITERNAKVFFGL 250
>gi|2052145|emb|CAB08135| (Z94752) hypothetical protein Rv1008
[Mycobacterium tuberculosis]
Length = 264
Score = 92.1 bits (225), Expect = 5e-18
Identities = 73/251 (29%), Positives = 114/251 (45%), Gaps = 13/251 (5%)
Frame = +1
Query: 13 LIDSHCHLDA-DAFDGDXXXXXXXXXXXXXXXXXXXXXT---AAKWPKLRTICTQTSGLY 180
++D+H HLDA A D D +A+W + +Y
Sbjct: 1 MVDAHTHLDACGARDADTVRSLVERAAAAGVTAVVTVADDLESARW--VTRAAEWDRRVY 58
Query: 181 PAYGLHPM---FLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEG-----LNREMQHT 336
A LHP LT+ L L + H R A+GE G+D Y G +Q
Sbjct: 59 AAVALHPTRADALTDAARAELERL---VAHPRVVAVGETGIDMYWPGRLDGCAEPHVQRE 115
Query: 337 YFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLRGVV-HSFSGSLEQARQLWKLGF 513
F + LA+ P+++H R A +V+ ++ G V+ H FS AR G+
Sbjct: 116 AFAWHIDLAKRTGKPLMIHNRQADRDVLDVLRAEGAPDTVILHCFSSDAAMARTCVDAGW 175
Query: 514 MISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIA 693
++SL G +++ A L + P++ LL+ETDAPY RG NEP L + +A
Sbjct: 176 LLSLSGTVSFRTARELREAVPLMPVEQLLVETDAPYLTPHPHRGLANEPYCLPYTVRALA 235
Query: 694 TLRKQDRTEISKVTRANTEQLFGL 765
L + E++ +T +N + +GL
Sbjct: 236 ELVNRRPEEVALITTSNARRAYGL 259
>gi|3323301 (AE001265) conserved hypothetical protein [Treponema
pallidum]
Length = 257
Score = 91.3 bits (223), Expect = 9e-18
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Frame = +1
Query: 175 LYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQL 354
+Y A G+ P + + ++ L+ + A+GE GLD+ + ++ Q FI QL
Sbjct: 58 VYHAVGVSPSEVMAPGKDWIDTIQKSLQLPQVVALGETGLDYCKKYGDKRSQIGLFITQL 117
Query: 355 MLAREYALPVIVHARHAVEEVIASI-KTVGTLRGVVHSFSGSLEQARQLWKLGFMISLGG 531
+A + PVI+H R A ++++ + + + GV H +S E AR L S G
Sbjct: 118 DIASKAKKPVIIHNRGAGQDILDILSERIPDQGGVFHCYSEDAEYARMALDLPVYFSFAG 177
Query: 532 AMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQD 711
+TY A LH+ + PLD +L+E+++P+ + R KRN P + ++++A L D
Sbjct: 178 NLTYRNARNLHETVLALPLDRILVESESPFMSPATYRNKRNRPAHTVETVEFMAELLDMD 237
Query: 712 RTEISKVTRANTEQLFGL 765
E++ N+ F L
Sbjct: 238 MLELADQLWKNSCACFHL 255
>gi|549588|sp|P27859|YIGW_ECOLI HYPOTHETICAL 29.6 KD PROTEIN IN
UDP-RFAH INTERGENIC REGION >gi|3123499|emb|CAA06727.1|
(AJ005830) TatD protein [Escherichia coli]
Length = 264
Score = 90.5 bits (221), Expect = 1e-17
Identities = 67/204 (32%), Positives = 99/204 (47%), Gaps = 7/204 (3%)
Frame = +1
Query: 154 ICTQTSGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQH 333
+ Q S + G+HP ++ A+ + AIGECGLDF E Q
Sbjct: 52 LARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQE 111
Query: 334 TYFIRQLMLAREYALPVIVHARHAVEEVIASIKT-VGTLRG-VVHSFSGSLEQARQLWKL 507
F+ QL +A + +PV +H R A E + ++ + L G V+H F+G+ E+ +
Sbjct: 112 RAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAH 171
Query: 508 GFMISL-GGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGK----RNEPGRLL 672
G I + G R L +L P + LL+ETDAPY ++ K RNEP L
Sbjct: 172 GIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLP 231
Query: 673 TILDYIATLRKQDRTEISKVTRANTEQLFGL 765
IL IA R +D ++ T AN + LFG+
Sbjct: 232 HILQRIAHWRGEDAAWLAATTDANVKTLFGI 262
>gi|3193220 (AF067848) MttC [Escherichia coli]
Length = 264
Score = 90.5 bits (221), Expect = 1e-17
Identities = 67/204 (32%), Positives = 99/204 (47%), Gaps = 7/204 (3%)
Frame = +1
Query: 154 ICTQTSGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQH 333
+ Q S + G+HP ++ A+ + AIGECGLDF E Q
Sbjct: 52 LARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQE 111
Query: 334 TYFIRQLMLAREYALPVIVHARHAVEEVIASIKT-VGTLRG-VVHSFSGSLEQARQLWKL 507
F+ QL +A + +PV +H R A E + ++ + L G V+H F+G+ E+ +
Sbjct: 112 RAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAH 171
Query: 508 GFMISL-GGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGK----RNEPGRLL 672
G I + G R L +L P + LL+ETDAPY ++ K RNEP L
Sbjct: 172 GIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLP 231
Query: 673 TILDYIATLRKQDRTEISKVTRANTEQLFGL 765
IL IA R +D ++ T AN + LFG+
Sbjct: 232 HILQRIAHWRGEDAAWLAATTDANAKTLFGI 262
>gi|3257625|dbj|BAA30308| (AP000005) 250aa long hypothetical protein
[Pyrococcus horikoshii]
Length = 250
Score = 82.3 bits (200), Expect = 4e-15
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 4/251 (1%)
Frame = +1
Query: 13 LIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAYG 192
+ID+H HL+ D + A W + LYP G
Sbjct: 1 MIDAHAHLEFYKRDYESIIGEAKEKLDGIIDSITEYRKAHVWKSWELLKGYFGFLYPTLG 60
Query: 193 LHPMFLTEHHPTHLHALRDW-LEHERPC-AIGECGLDFY--LEGLNREMQHTYFIRQLML 360
HP + + + ++ LEH+ IGE GLD+Y RE Q F L +
Sbjct: 61 YHPNEAKRGNWEKVKRVEEFILEHKDEIYGIGEIGLDYYHAKTSKERENQRIIFEHFLNI 120
Query: 361 AREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFMISLGGAMT 540
A+E LPV++HAR A E I+ + HS++G +E A+++ + G I + +
Sbjct: 121 AQELRLPVVIHARMAEREAFNIIQKF-DVNAYFHSYTGPVELAKEISENGHFIGIVTGIV 179
Query: 541 YPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTE 720
+ + ++A + ++ LL ETD+PY S +G +N+P + +L+ ++ +++ E
Sbjct: 180 F--IPEVRKVAEKMDIEGLLAETDSPYM--SPYKGIKNKPWFVKIVLEELSKIKEIPIEE 235
Query: 721 ISKVTRANTEQLFGL 765
+ ++ N ++ F +
Sbjct: 236 VEEIIDGNIKKFFSI 250
>gi|6138836|emb|CAB59647.1| (AL132674) hypothetical protein
SCE87.02c [Streptomyces coelicolor A3(2)]
Length = 296
Score = 80.4 bits (195), Expect = 2e-14
Identities = 48/162 (29%), Positives = 81/162 (49%), Gaps = 2/162 (1%)
Frame = +1
Query: 277 IGECGLDFYLEGLN-REMQHTYFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTL-R 450
+GE GLD++ G +E Q F + +A+ + +++H R A +V+ +K G R
Sbjct: 132 VGETGLDYFRTGPEGKEAQERSFRAHIEIAKRHGKTLVIHDRDAHTDVLRVLKEEGAPER 191
Query: 451 GVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPD 630
V H +SG E A + G+ +S G +T+ A L P + +L+ETDAP+
Sbjct: 192 TVFHCYSGDAEMAGICARAGYYMSFAGNVTFKNAQNLRDALAVAPPELVLVETDAPFLTP 251
Query: 631 SEIRGKRNEPGRLLTILDYIATLRKQDRTEISKVTRANTEQLFG 762
+ RG+ N P + + +A +R D ++ ANT + FG
Sbjct: 252 APYRGRPNAPYLVPVTVRAMAEVRGVDEDTLATALAANTARAFG 295
>gi|3915472|sp|Q58977|YF82_METJA HYPOTHETICAL PROTEIN MJ1582
>gi|2128064|pir||E64497 hypothetical protein homolog
MJ1582 - Methanococcus jannaschii >gi|1592198 (U67598)
conserved hypothetical protein [Methanococcus
jannaschii]
Length = 249
Score = 78.4 bits (190), Expect = 6e-14
Identities = 65/252 (25%), Positives = 112/252 (43%), Gaps = 9/252 (3%)
Frame = +1
Query: 4 NVVLIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYP 183
+V +D+HCH++ AF+ + C + L
Sbjct: 3 DVKYVDAHCHIEDKAFNKNRDEVIERAKKEDVIIVTSGASLGG--------CLRALELRK 54
Query: 184 AYGLHPMFLTEHHPTHLHALRDWLE---------HERPCAIGECGLDFYLEGLNREMQHT 336
Y ++ +HP+ + A +E AIGE G+D E R Q
Sbjct: 55 KYNIY--LTLGYHPSRVKADDKVIEKVYNLIKNNEYEILAIGEIGMDIKDENYKR--QEE 110
Query: 337 YFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFM 516
F + L LA E P++VHAR ++ K + + H +SG +E A+++ K G +
Sbjct: 111 IFKKFLSLAEELNKPIVVHARGFERKIFDIAKDKVDI--MFHCYSGDVELAKEIGKEGHL 168
Query: 517 ISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIAT 696
IS+ + + H+ +L L+ L ETD+PY S I+G +NEP + +++ IA
Sbjct: 169 ISISTLVCFSEHHK--KLVESLDLEYLTTETDSPYL--SPIKGTKNEPKNVKLVIEEIAK 224
Query: 697 LRKQDRTEISKVTRANTEQLF 759
+++ + E+ V NT + F
Sbjct: 225 IKEMEVEEVKDVIYKNTCKFF 245
>gi|3323320 (AE001267) conserved hypothetical protein [Treponema
pallidum]
Length = 269
Score = 76.1 bits (184), Expect = 3e-13
Identities = 49/129 (37%), Positives = 69/129 (52%), Gaps = 20/129 (15%)
Frame = +1
Query: 274 AIGECGLDFYLEGL----------------NREMQHTYFIRQLMLAREYALPVIVHARHA 405
A+GECGLD + G + + + F QL +A+ LP+I+H+R A
Sbjct: 69 ALGECGLDRHWNGPQVACKARKGSGVRGTPDLDAEEYLFKAQLSIAKAQNLPLIIHSRDA 128
Query: 406 VEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAH----RLHQLA 573
E + + +VG +GV+H FS + +A + G IS G +TY + L
Sbjct: 129 FEPTLRCLDSVGWRKGVMHCFSYGVVEAHAFLERGLYISCAGTLTYAKTTSELLARDALI 188
Query: 574 METPLDCLLLETDAPYQPDSEIRGKRNEP 660
PLD LLLETD PY RG N P
Sbjct: 189 RSIPLDRLLLETDTPYLAPVPHRGTHNRP 217
>gi|2501546|sp|Q93075|Y218_HUMAN HYPOTHETICAL PROTEIN KIAA0218
>gi|1504018|dbj|BAA13208| (D86972) similar to E.coli
hypothetical 29.6 KD protein(P1:YIGW_ECOLI) [Homo
sapiens]
Length = 761
Score = 74.5 bits (180), Expect = 9e-13
Identities = 59/197 (29%), Positives = 93/197 (46%), Gaps = 8/197 (4%)
Frame = +1
Query: 175 LYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDF-YLEGLNREMQHTYFIRQ 351
++ A+G HP F + + L L H + A GE GLD+ Y QH F RQ
Sbjct: 557 VWGAFGCHPHFARYYSESQERNLLQALRHPKAVAFGEMGLDYSYKCTTPVPEQHKVFERQ 616
Query: 352 LMLAREYALPVIVHARHAVEEVIASIKTVGTLRGVV--HSFSGSLEQARQLWKLGFMISL 525
L LA P+++H R A E+++ +K + H F+GS L K +S+
Sbjct: 617 LQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHRHCFTGSYPVIEPLLKYFPNMSV 676
Query: 526 G--GAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRG---KRNEPGRLLTILDYI 690
G +TY A + + PL+ +++ETDAPY ++ + PG L + I
Sbjct: 677 GFTAVLTYSSAWEAREALRQIPLERIIVETDAPYFLPRQVPKSLCQYAHPGLALHTVREI 736
Query: 691 ATLRKQDRTEISKVTRANTEQLFGL 765
A ++ Q + R NT +L+ L
Sbjct: 737 ARVKDQPLSLTLAALRENTSRLYSL 761
>gi|1729438|emb|CAA69984| (Y08729) hypothetical protein [Acidianus
ambivalens]
Length = 243
Score = 73.4 bits (177), Expect = 2e-12
Identities = 58/195 (29%), Positives = 98/195 (49%), Gaps = 8/195 (4%)
Frame = +1
Query: 175 LYPAYGLHPMFL--TEHHPTHLHALRDWLEHERPCAIGECGLDFYL--EGLNREMQHTYF 342
+YPA G HP ++ E + L D + AI E GLD+Y + R+ +
Sbjct: 53 VYPAIGFHPEYIEKAEKEVDKILPLID-----KAMAISEVGLDYYWIKDEKLRKKEIEVL 107
Query: 343 IRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFMIS 522
L + + PVI+H R + + + I + L ++H+F GS++ AR++ +
Sbjct: 108 STFLEIGEKRRKPVILHIRGGMSDFLQLISSY-KLTFIIHAFEGSIKIARKI------LD 160
Query: 523 LGGAMTYP----RAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYI 690
LGG +++P R + Q+A E PLD L ETD+P+ +GK NEP + L +
Sbjct: 161 LGGYLSFPPIIVRDNLRRQIAKEVPLDRLFTETDSPFLGPE--KGKINEPCNVSITLSEL 218
Query: 691 ATLRKQDRTEISKVTRANTEQLF 759
+ ++ + EI K N ++F
Sbjct: 219 SIIKGLGKEEIEKQIEKNFYRVF 241
>gi|1351455|sp|P47255|Y009_MYCGE HYPOTHETICAL PROTEIN MG009
>gi|1361550|pir||I64200 hypothetical protein homolog
MG009 - Mycoplasma genitalium (SGC3) >gi|1045677
(U39679) conserved hypothetical protein [Mycoplasma
genitalium]
Length = 262
Score = 72.2 bits (174), Expect = 5e-12
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Frame = +1
Query: 277 IGECGLDFYLEGLNREMQHTYFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLRGV 456
IGE G D++ E+Q+ +F Q +A L ++H R A E++ + + + V
Sbjct: 94 IGEYGFDYHYTTEFIELQNKFFEMQFEIAETNKLVHMLHIRDAHEKIYEILTRLKPTQPV 153
Query: 457 V-HSFSGSLEQARQLWKL-----GFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAP 618
+ H FS + A++L L S+ G +T+ A LH+ P + LL ETD+P
Sbjct: 154 IFHCFSQDINIAKKLLSLKDLNIDIFFSIPGIVTFKNAQALHEALKIIPSELLLSETDSP 213
Query: 619 YQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTEISKVTRANTEQLF 759
+ S RGK N P ++ + +A ++K + E+ ++ N ++LF
Sbjct: 214 WLTPSPFRGKVNWPEYVVHTVSTVAEIKKIEIAEMKRIIVKNAKKLF 260
>gi|2501547|sp|P78005|Y009_MYCPN HYPOTHETICAL PROTEIN MG009 HOMOLOG
>gi|2146296|pir||S73471 hypothetical protein yabD -
Mycoplasma pneumoniae (SGC3) (ATCC 29342) >gi|1673805
(AE000016) Mycoplasma pneumoniae, hypothetical protein
(yabD) homolog; similar to Swiss-Prot Accession Number
P37545, from B. subtilis [Mycoplasma pneumoniae]
Length = 261
Score = 68.7 bits (165), Expect = 5e-11
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Frame = +1
Query: 277 IGECGLDFYLEGLNREMQHTYFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLRGV 456
IGE G D++ Q +F+ Q LA +Y L ++H R E + +K + + V
Sbjct: 94 IGEYGFDYHYTKDYITQQEQFFLMQFQLAEQYQLVHMLHVRDVHERIYEVLKRLKPKQPV 153
Query: 457 V-HSFSGSLEQARQLWKL---GFMI--SLGGAMTYPRAHRLHQLAMETPLDCLLLETDAP 618
V H FS A +L L G + S+ G +T+ A L P + LL ETD+P
Sbjct: 154 VFHCFSEDTNTALKLLTLREVGLKVYFSIPGIVTFKNAKNLQAALSVIPTELLLSETDSP 213
Query: 619 YQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTEISKVTRANTEQLF 759
Y RGK N P ++ + IA +++ EI + N ++LF
Sbjct: 214 YLAPVPFRGKTNWPECVVHTVQTIADIKQVPLAEIKQAIVHNAKKLF 260
>gi|1707143 (U80836) B0432.8 gene product [Caenorhabditis elegans]
Length = 364
Score = 64.8 bits (155), Expect = 8e-10
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Frame = +1
Query: 250 WLEHERPC-AIGECGLD-----FYLEGLNREMQHTYFIRQLMLAREYALPVI-------- 387
++EHER +GECGLD F L + E Q T F Q+ LA+ + P+I
Sbjct: 180 FVEHERDIICVGECGLDHTISQFKLTTEDFEEQETVFKWQIDLAKHFEKPLILEIPDISR 239
Query: 388 -VHARHAVEEVIASIKT--VGTLRGVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAHR 558
VH+R A I + V + V+H+F G+ + + G++ S+ ++ ++
Sbjct: 240 NVHSRSAARRTIEILLECHVAPDQVVLHAFDGTPGDLKLGLEAGYLFSI--PPSFGKSEE 297
Query: 559 LHQLAMETPLDCLLLETDAP-YQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTEISKVT 735
QL PL LLLETD+P P+ +G +N P L + +A ++K + +I T
Sbjct: 298 TTQLIESIPLSQLLLETDSPALGPE---KGCKNVPANLRISAEIVAKIKKLEIDDIISAT 354
Query: 736 RANTEQLF 759
N ++F
Sbjct: 355 STNANRIF 362
>gi|2257524|dbj|BAA21418| (AB004537) HYPOTHETICAL 47.4KD PROTEIN IN
SHP1-SEC17 INTERGENIC REGION [Schizosaccharomyces pombe]
Length = 258
Score = 62.8 bits (150), Expect = 3e-09
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 31/161 (19%)
Frame = +1
Query: 274 AIGECGLDF-YLEGLNREMQHTYFIRQLMLAREYALPVIVHARHAVEEVIASI-KTVGTL 447
A GE GLD+ L ++Q YF QL +A LP+ +H+R+A + A + K + L
Sbjct: 67 AFGEFGLDYDRLHYAPADVQKMYFEEQLKVAVRVQLPLFLHSRNAENDFFAILEKYLPEL 126
Query: 448 --RGVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAP- 618
+GVVHSF+GS+++ R+ + G + + G + ++ PL+ +LLETDAP
Sbjct: 127 PKKGVVHSFTGSIDEMRRCIEHGLYVGVNGCSL--KTEENLEVVRAIPLEKMLLETDAPW 184
Query: 619 --------------------------YQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTE 720
++ IRG RNEP + + +A L+ E
Sbjct: 185 CEVRPSHAGHQFLKTKLPFDSCKKERFKEGCMIRG-RNEPCNTYIVAEIVAALKDISLEE 243
Query: 721 ISKVTRANTEQL 756
+S+ N+ L
Sbjct: 244 LSEQIWENSINL 255
>gi|5679727|emb|CAB51767.1| (AL109652) hypothetical protein
[Schizosaccharomyces pombe]
Length = 312
Score = 62.8 bits (150), Expect = 3e-09
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 31/161 (19%)
Frame = +1
Query: 274 AIGECGLDF-YLEGLNREMQHTYFIRQLMLAREYALPVIVHARHAVEEVIASI-KTVGTL 447
A GE GLD+ L ++Q YF QL +A LP+ +H+R+A + A + K + L
Sbjct: 121 AFGEFGLDYDRLHYAPADVQKMYFEEQLKVAVRVQLPLFLHSRNAENDFFAILEKYLPEL 180
Query: 448 --RGVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAP- 618
+GVVHSF+GS+++ R+ + G + + G + ++ PL+ +LLETDAP
Sbjct: 181 PKKGVVHSFTGSIDEMRRCIEHGLYVGVNGCSL--KTEENLEVVRAIPLEKMLLETDAPW 238
Query: 619 --------------------------YQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTE 720
++ IRG RNEP + + +A L+ E
Sbjct: 239 CEVRPSHAGHQFLKTKLPFDSCKKERFKEGCMIRG-RNEPCNTYIVAEIVAALKDISLEE 297
Query: 721 ISKVTRANTEQL 756
+S+ N+ L
Sbjct: 298 LSEQIWENSINL 309
>gi|4886288|emb|CAB43446.1| (AL050300) putative protein [Arabidopsis
thaliana]
Length = 299
Score = 60.9 bits (145), Expect = 1e-08
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Frame = +1
Query: 163 QTSG-LYPAYGLHPMFLTEHHPT-----HLHAL----RDWLEHERPCAIGECGLDF-YLE 309
+T G L+ G+HP E + H AL ++ ++ + AIGECGLD+ L+
Sbjct: 51 ETDGRLFCTVGVHPTRCNEFEESGDPEKHYQALFSLAKEGMQKGKVVAIGECGLDYDRLQ 110
Query: 310 GLNREMQHTYFIRQLMLAREYALPVIVHARHAVE---EVIASIKTVGTLRGVVHSFSGSL 480
+ ++Q YF +Q LA LP+ +H R A E E++ K T GV HSF+GS
Sbjct: 111 FCSVDIQKKYFEKQFELAYATKLPMFLHMRAAAEDFCEIVERNKNRFT-GGVAHSFTGSA 169
Query: 481 EQARQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPY 621
+L M + A L ++ P++ +++ETD+PY
Sbjct: 170 SDRDKLLSFDKMYLGVNGCSLKTAENL-EVMKGIPVERMMIETDSPY 215
>gi|1176064|sp|P45305|YG64_HAEIN HYPOTHETICAL PROTEIN HI1664
Length = 251
Score = 59.7 bits (142), Expect = 3e-08
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 9/252 (3%)
Frame = +1
Query: 10 VLIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAY 189
+L DSH HLD D + +A K L+ T LY A
Sbjct: 1 MLFDSHLHLD-QLSDENIQQTLAHSKIIGMLAVSTNLNSAKKLLNLKQ--TYPKKLYIAA 57
Query: 190 GLHPMFLTEHHPT--HLHALRDWLE--HERPCAIGECGLDFYLEGLNREMQHTYFI---- 345
G HP + P+ L W++ H AIGE GL Y + N + + +I
Sbjct: 58 GFHP---EQQLPSLEEQKKLFQWIDEHHSSISAIGEVGLPHYSKRENPNLDYVPYIELLE 114
Query: 346 RQLMLAREYALPVIVHARHA-VEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFMIS 522
R +++A+++ LP+ +H H VE + ++ R H F + ++ + + S
Sbjct: 115 RFILIAKKWDLPLNLHIVHNDVEIALELLQKHNIQRAHFHWFKTDEKSFQKFFSTPYFAS 174
Query: 523 LGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLR 702
L + + + +A L+ L++ETD+P+Q + R +E +LL +L +A L+
Sbjct: 175 LTPDILWNS--KTQYVAQHLSLNRLMIETDSPWQHEGFERAGISE--QLLAVLQKLAELK 230
Query: 703 KQDRTEISKVTRANTEQLFGL 765
+ K NT+Q + L
Sbjct: 231 SLPLHSVQKQILLNTQQFYRL 251
>gi|1074887|pir||E64174 hypothetical protein HI1664 - Haemophilus
influenzae (strain Rd KW20) >gi|1574514 (U32839)
conserved hypothetical protein [Haemophilus influenzae
Rd]
Length = 259
Score = 59.7 bits (142), Expect = 3e-08
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 9/252 (3%)
Frame = +1
Query: 10 VLIDSHCHLDADAFDGDXXXXXXXXXXXXXXXXXXXXXTAAKWPKLRTICTQTSGLYPAY 189
+L DSH HLD D + +A K L+ T LY A
Sbjct: 9 MLFDSHLHLD-QLSDENIQQTLAHSKIIGMLAVSTNLNSAKKLLNLKQ--TYPKKLYIAA 65
Query: 190 GLHPMFLTEHHPT--HLHALRDWLE--HERPCAIGECGLDFYLEGLNREMQHTYFI---- 345
G HP + P+ L W++ H AIGE GL Y + N + + +I
Sbjct: 66 GFHP---EQQLPSLEEQKKLFQWIDEHHSSISAIGEVGLPHYSKRENPNLDYVPYIELLE 122
Query: 346 RQLMLAREYALPVIVHARHA-VEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFMIS 522
R +++A+++ LP+ +H H VE + ++ R H F + ++ + + S
Sbjct: 123 RFILIAKKWDLPLNLHIVHNDVEIALELLQKHNIQRAHFHWFKTDEKSFQKFFSTPYFAS 182
Query: 523 LGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLR 702
L + + + +A L+ L++ETD+P+Q + R +E +LL +L +A L+
Sbjct: 183 LTPDILWNS--KTQYVAQHLSLNRLMIETDSPWQHEGFERAGISE--QLLAVLQKLAELK 238
Query: 703 KQDRTEISKVTRANTEQLFGL 765
+ K NT+Q + L
Sbjct: 239 SLPLHSVQKQILLNTQQFYRL 259
>gi|6425283|emb|CAB60573.1| (AL132863) Y37H2A.1 [Caenorhabditis
elegans]
Length = 477
Score = 57.8 bits (137), Expect = 1e-07
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 16/165 (9%)
Frame = +1
Query: 274 AIGECGLDFYLEGLNREMQHTYFIRQLMLAREYALPVIVHAR-----HAVEEVIASIK-- 432
A+GECGLD + + E+Q F + + LA +Y LP+++H R A E+ + +K
Sbjct: 295 AVGECGLDLHRCISDLEVQKMVFEKHIDLAYKYQLPLVIHCRSGQKGRAEEQCLRILKKK 354
Query: 433 ---TVGTLRGVVHSFSGSLEQARQLWKLGFMISLG--GAMTYPRAHRLHQLAMETPLDCL 597
L+ H F+ + E A+ K + G A+ R + + PL+ +
Sbjct: 355 MDENHKFLKIHRHCFTETWEVAQMWMKQCPNVYFGYTAAIFKMRERQQLEAIRHIPLNRI 414
Query: 598 LLETDAPY--QPDSEIRGKRNE--PGRLLTILDYIATLRKQDRTEISKVTRANTEQLFGL 765
LLETDAPY P E G RN PG + IA +++ E+ + T NT L+ +
Sbjct: 415 LLETDAPYFRPPCFEGVGPRNVCLPGMAIATARKIAEIKELPVDEVLRATFDNTRLLYQI 474
Query: 766 K 768
+
Sbjct: 475 Q 475
>gi|6425289|emb|CAB60325.1| (AL110480) Y24F12A.1 [Caenorhabditis
elegans]
Length = 435
Score = 55.8 bits (132), Expect = 4e-07
Identities = 61/202 (30%), Positives = 99/202 (48%), Gaps = 21/202 (10%)
Frame = +1
Query: 166 TSGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFI 345
T G +P + H + T + L D E + A+GECG+D + E+Q F
Sbjct: 219 TWGCHPHFAQHWGRMGVFWTTMEYILSD-AEEWKVLAVGECGIDLHRCESELEVQKDVFE 277
Query: 346 RQLMLAREYALPVIVHARH-----AVEEVIASIK-----TVGTLRGVVHSFSGSLEQARQ 495
+ + LA ++ LP+++H R+ A EE + +K L+ H F+ + E A Q
Sbjct: 278 KHVALAFKFKLPLVIHCRNGSKGRAEEECLQILKKKMDVNHKFLKIHRHCFTENWEVA-Q 336
Query: 496 LW-------KLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPY-QP---DSEIR 642
+W GF ++ M P+ + + PLD +LLETD PY +P D
Sbjct: 337 MWLKQCPDVHFGFTPAV-FTMGAPQIQAIRNI----PLDRILLETDGPYFKPKCYDGVAP 391
Query: 643 GKRNEPGRLLTILDYIATLRKQDRTEISKVTRANTEQLFGLKV 771
K PG + IA ++ E+ + T NT +++ L V
Sbjct: 392 PKVCLPGMAIATASKIAEIKNLPIEEVLRATFNNTRRVYQLPV 434
>gi|1790274 (AE000459) orf, hypothetical protein [Escherichia coli]
Length = 206
Score = 54.7 bits (129), Expect = 9e-07
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +1
Query: 154 ICTQTSGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQH 333
+ Q S + G+HP ++ A+ + AIGECGLDF E Q
Sbjct: 52 LARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQE 111
Query: 334 TYFIRQLMLAREYALPVIVHARHAVEEVIASIKT-VGTLRG-VVHSFSGSLEQARQLWKL 507
F+ QL +A + +PV +H R A E + ++ + L G V+H F+G+ E+ +
Sbjct: 112 RAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAH 171
Query: 508 GFMISLGG 531
G I + G
Sbjct: 172 GIYIGITG 179
>gi|5104065|dbj|BAA79381.1| (AP000059) 252aa long hypothetical
protein [Aeropyrum pernix]
Length = 252
Score = 54.3 bits (128), Expect = 1e-06
Identities = 54/210 (25%), Positives = 89/210 (41%), Gaps = 2/210 (0%)
Frame = +1
Query: 136 WPKLRTICTQTSGLYPAYGLHPMFLTEHHPTHL-HALRDWLEHERPCAIGECGLDF-YLE 309
W L T + P G HP + E LR + PC +GE GLD +++
Sbjct: 47 WRTLDLWHTFGGRVVPCLGFHPWNVREGRVWEAWEVLRLAYRYGVPC-LGEVGLDRRFVD 105
Query: 310 GLNREMQHTYFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQA 489
+Q+ F + LA + + + +HA A + V I R + H ++G
Sbjct: 106 EYTWRVQNEVFDAFVQLAEDMGVMLNIHAPDAWKHVAHRIGWTSRARFMYHWYTGPATLP 165
Query: 490 RQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRL 669
R L + S+ A+ + ++A E PL L++E+D PY RG R P +
Sbjct: 166 RALPEGRVWFSINSAIRVQE--KSVRVAREIPLRSLVVESDGPY----NYRGLRLSPLMV 219
Query: 670 LTILDYIATLRKQDRTEISKVTRANTEQLFGL 765
+ +A R +D + + N+E+L GL
Sbjct: 220 RETVKLVAEARGEDPGRLMEAISLNSERLLGL 251
>gi|421091|pir||S30730 hypothetical protein o206 - Escherichia coli
>gi|148239 (M87049) o206 [Escherichia coli]
Length = 206
Score = 54.3 bits (128), Expect = 1e-06
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +1
Query: 154 ICTQTSGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQH 333
+ Q S + G+HP ++ A+ + AIGECGLDF E Q
Sbjct: 52 LARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAXXEVVAIGECGLDFNRNFSTPEEQE 111
Query: 334 TYFIRQLMLAREYALPVIVHARHAVEEVIASIKT-VGTLRG-VVHSFSGSLEQARQLWKL 507
F+ QL +A + +PV +H R A E + ++ + L G V+H F+G+ E+ +
Sbjct: 112 RAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAH 171
Query: 508 GFMISLGG 531
G I + G
Sbjct: 172 GIYIGITG 179
>gi|6460974|gb|AAF12677.1|AE001827_15 (AE001827) conserved
hypothetical protein [Deinococcus radiodurans]
Length = 244
Score = 53.5 bits (126), Expect = 2e-06
Identities = 54/213 (25%), Positives = 98/213 (45%), Gaps = 8/213 (3%)
Frame = +1
Query: 124 TAAKWPKLRTICTQTSGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCA--IGECGLD 297
T A W + ++ A G HP ++E A W + P +GE GLD
Sbjct: 34 TPAAWRGTLALAAGRPHVWTALGFHPEVVSERA-----ADLPWFDRYLPETRFVGEVGLD 88
Query: 298 FY--LEGLNREMQHTYFIRQLMLAREYALPVI-VHARHAVEEVIASIKT---VGTLRGVV 459
L G + Q F L ++ ++ +H+R A EV+ ++ GT ++
Sbjct: 89 GSPSLRGTWTQ-QFAVFQHILRRCEDHGGRILSIHSRRAESEVLNCLEANPRSGT--PIL 145
Query: 460 HSFSGSLEQARQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEI 639
H +SGS+ + R+ LG S+G M R + L P D +L ETD P+ E+
Sbjct: 146 HWYSGSVTELRRAISLGCWFSVGPTMV--RTQKGAALIRSMPRDRVLTETDGPF---LEL 200
Query: 640 RGKRNEPGRLLTILDYIATLRKQDRTEISKVTRANTEQLFG 762
G+ P + ++++ ++ + + +E+ ++ + N +L G
Sbjct: 201 DGQAALPWDVKSVVEGLSKIWQIPASEVERIVKENVSRLLG 241
>gi|148240 (M87049) o113 [Escherichia coli] >gi|1790275 (AE000459)
orf, hypothetical protein [Escherichia coli]
Length = 113
Score = 53.1 bits (125), Expect = 3e-06
Identities = 37/95 (38%), Positives = 54/95 (55%), Gaps = 6/95 (6%)
Frame = +1
Query: 481 EQARQLWKLGFMISL--GGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGK-- 648
++ R+ W++ F+ +L G AM R L +L P + LL+ETDAPY ++ K
Sbjct: 12 KRCRRAWRMEFISALPVGFAMNR-RGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPS 70
Query: 649 --RNEPGRLLTILDYIATLRKQDRTEISKVTRANTEQLFGL 765
RNEP L IL IA R +D ++ T AN + LFG+
Sbjct: 71 SRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGI 111
>gi|421078|pir||S30731 hypothetical protein o113 - Escherichia coli
Length = 113
Score = 53.1 bits (125), Expect = 3e-06
Identities = 37/95 (38%), Positives = 54/95 (55%), Gaps = 6/95 (6%)
Frame = +1
Query: 481 EQARQLWKLGFMISL--GGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGK-- 648
++ R+ W++ F+ +L G AM R L +L P + LL+ETDAPY ++ K
Sbjct: 12 KRCRRAWRMEFISALPVGFAMNR-RGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPS 70
Query: 649 --RNEPGRLLTILDYIATLRKQDRTEISKVTRANTEQLFGL 765
RNEP L IL IA R +D ++ T AN + LFG+
Sbjct: 71 SRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGI 111
>gi|6594244|emb|CAB63556.1| (AL031746) conserved hypothetical
protein, UPF0006 family [Plasmodium falciparum]
Length = 412
Score = 46.5 bits (108), Expect = 3e-04
Identities = 38/119 (31%), Positives = 59/119 (48%), Gaps = 5/119 (4%)
Frame = +1
Query: 265 RPCAIGECGLDF-YLEGLNREMQHTYFIRQLMLAREYALPVIVHARHAVEEVIASIKTVG 441
R IGE GLDF L ++ +Q YFI QL L + + LP+ +H R+ E +
Sbjct: 239 RIVCIGEIGLDFDRLYFCSKYIQIKYFIFQLKLVQMFNLPMFLHMRNCSETFFKIVDIYK 298
Query: 442 TL----RGVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLLLET 609
L GV+HSF+ + + + + +G ++ + PL+ LLLET
Sbjct: 299 FLFEKNGGVIHSFTDKEDIVHIIVQNYKNLYIGVNGCSLKSLENINAVKKIPLNLLLLET 358
Query: 610 DAPY 621
DAP+
Sbjct: 359 DAPW 362
>gi|2833570|sp|Q58171|Y761_METJA HYPOTHETICAL PROTEIN MJ0761
>gi|2128484|pir||A64395 hypothetical protein MJ0761 -
Methanococcus jannaschii >gi|1591471 (U67521) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 251
Score = 43.8 bits (101), Expect = 0.002
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +1
Query: 184 AYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQLMLA 363
A G+HPM ++ + L ++L++E AIGE GL + E + QL LA
Sbjct: 68 AVGVHPMGYPKNWEVLIKKLPEFLDNENVVAIGETGLHYLTED-----EKNLLREQLYLA 122
Query: 364 REYALPVIVHA--RHAVEEVIASIKTVGTLR 450
++Y +P+I+H ++ E +I +K + ++
Sbjct: 123 KDYNMPIIIHTPEKNKKEALIEILKILDEVK 153
>gi|2622977 (AE000937) conserved protein [Methanobacterium
thermoautotrophicum]
Length = 235
Score = 43.0 bits (99), Expect = 0.003
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +1
Query: 175 LYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQL 354
L+ A G+HP + H L L L+ A+GE GLD E++ FI Q+
Sbjct: 48 LHLALGMHPRAIPPDHGRVLEELPALLKDSSVVAVGEIGLD-----SGSEIEKEVFIEQM 102
Query: 355 MLAREYALPVIVH 393
+A E PVIVH
Sbjct: 103 QMADELGFPVIVH 115
>gi|6319416|ref|NP_009498.1|YBL055C| Ybl055cp
>gi|465514|sp|P34220|YBF5_YEAST HYPOTHETICAL 47.4 KD
PROTEIN IN PTC3-SAS3 INTERGENIC REGION
>gi|542308|pir||S39833 hypothetical protein YBL055c -
yeast (Saccharomyces cerevisiae)
>gi|313743|emb|CAA80792| (Z23261) YBLO511 [Saccharomyces
cerevisiae] >gi|536084|emb|CAA84875| (Z35816) ORF
YBL055c [Saccharomyces cerevisiae]
Length = 418
Score = 39.5 bits (90), Expect = 0.034
Identities = 38/116 (32%), Positives = 63/116 (53%), Gaps = 33/116 (28%)
Frame = +1
Query: 274 AIGECGLDF-YLEGLNREMQHTYFIRQLMLA----REYALPVIVHARHAVEEVIA----- 423
+IGE GLD+ ++EMQ +F QL ++ + + P+ +H R A ++ +
Sbjct: 182 SIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSACDDFVQILERF 241
Query: 424 -----------SIKTVGTLRG------------VVHSFSGSLEQARQLWKLGFMISLGGA 534
++ +G VVHSF+GS ++L L I +G
Sbjct: 242 IAGFTDERDTFQLQKLGASSSSGFYKFHPDRKLVVHSFTGSAIDLQKLLNLSPNIFIGVN 301
Query: 535 MTYPRAHRLHQLAMETPLDCLLLETDAPY 621
R + + P + LLLETDAP+
Sbjct: 302 GCSLRTEENLAVVKQIPTERLLLETDAPW 330
>gi|3219993|sp|Q58778|YD83_METJA HYPOTHETICAL PROTEIN MJ1383
PRECURSOR >gi|2128823|pir||F64472 hypothetical protein
MJ1383 - Methanococcus jannaschii >gi|1592029 (U67578)
conserved hypothetical protein [Methanococcus
jannaschii]
Length = 256
Score = 37.5 bits (85), Expect = 0.13
Identities = 25/85 (29%), Positives = 41/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 175 LYPAYGLHPMFLTEHHPTHLHALRDWLEHE-RPCAIGECGLDFYLEGLNREMQHTYFIRQ 351
L+ G+HP + L ++ ++ + R IGE GL E +E + FI+Q
Sbjct: 64 LFICVGMHPRAIPPEIDEALDKIKSYINYNSRVVGIGEIGL----EKATKEEKEV-FIKQ 118
Query: 352 LMLAREYALPVIVHARHAVEEVIASI 429
L+LA E +P +VH +E + I
Sbjct: 119 LLLAEELNMPAVVHTPRRNKEEVTKI 144
>gi|6580328|emb|CAB63397.1| (AL032652) Y63D3A.3 [Caenorhabditis
elegans]
Length = 276
Score = 36.0 bits (81), Expect = 0.38
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +1
Query: 382 VIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAHRL 561
+ VH H + +++S+K+V H+ +GSL ++R K+ I+ G++ H L
Sbjct: 6 ISVHVDHQINIIVSSVKSV-----TYHASNGSLRESR--GKIDRQINFPGSLKQFVEHLL 58
Query: 562 HQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLR----KQDRTEISK 729
H + E +D L + ++ YQ +I+ + R L + + L+ DR E S
Sbjct: 59 H-IFKEHKIDDLEIMCNSVYQYKPDIQALKGIKMRTLKLRYQESILKMFGTSADRIEFST 117
Query: 730 VTRANTE 750
+ A E
Sbjct: 118 IKSAELE 124
>gi|173197 (M88172) ORF3 [Saccharomyces cerevisiae]
Length = 313
Score = 35.6 bits (80), Expect = 0.50
Identities = 35/114 (30%), Positives = 55/114 (47%), Gaps = 27/114 (23%)
Frame = +1
Query: 277 IGECGLD---------FYLEGLNREM---------QHTYFIRQLMLAREYALPVIVH--- 393
IGE GLD FY++ + Q T F R LAR + P+ +H
Sbjct: 124 IGEIGLDKLFRLPANGFYMQNEKARLTTVKVKLSHQETVFRRFCRLARHTSKPISIHDVK 183
Query: 394 ARHAVEEVI-ASIKTVGTLRGVVHSFSGSLEQARQLWKLGF-----MISLGGAMTYPRAH 555
+ ++ + T +++ +HS++GS E W F +SL + +
Sbjct: 184 CHGKLNDICNEELLTYHSVKICLHSYTGSKETLLGQWLKKFPPDRIFVSLSKWINFKDPE 243
Query: 556 RLHQLAMETPLDCLLLETDAP 618
L P C+L ETD P
Sbjct: 244 EGDALVRSLPSTCILTETDYP 264
>gi|6323918|ref|NP_013989.1|YMR262W| Ymr262wp
>gi|1730605|sp|P38430|YM8C_YEAST HYPOTHETICAL 36.1 KD
PROTEIN IN TPS3-IPP2 INTERGENIC REGION (ORF3)
>gi|1084886|pir||S54474 hypothetical protein YMR262w -
yeast (Saccharomyces cerevisiae)
>gi|809085|emb|CAA89245| (Z49260) unknown [Saccharomyces
cerevisiae]
Length = 313
Score = 35.2 bits (79), Expect = 0.66
Identities = 35/114 (30%), Positives = 55/114 (47%), Gaps = 27/114 (23%)
Frame = +1
Query: 277 IGECGLD---------FYLEGLNREM---------QHTYFIRQLMLAREYALPVIVH--- 393
IGE GLD FY++ + Q T F R LAR + P+ +H
Sbjct: 124 IGEIGLDKLFRLPANGFYMQNEKARLTTVKVKLSHQETVFRRFWRLARHTSKPISIHDVK 183
Query: 394 ARHAVEEVI-ASIKTVGTLRGVVHSFSGSLEQARQLWKLGF-----MISLGGAMTYPRAH 555
+ ++ + T +++ +HS++GS E W F +SL + +
Sbjct: 184 CHGKLNDICNEELLTYHSVKICLHSYTGSKETLLGQWLKKFPPDRIFVSLSKWINFKDPE 243
Query: 556 RLHQLAMETPLDCLLLETDAP 618
L P C+L ETD P
Sbjct: 244 EGDALVRSLPSTCILTETDYP 264
>gi|4490986|emb|CAB38883.1| (AL035707) hypothetical protein
[Streptomyces coelicolor]
Length = 289
Score = 35.2 bits (79), Expect = 0.66
Identities = 22/57 (38%), Positives = 28/57 (48%)
Frame = +1
Query: 232 LHALRDWLEHERPCAIGECGLDFYLEGLNREMQHTYFIRQLMLAREYALPVIVHARH 402
L L D+L +R A+GE G D + F QL LA +ALPV+VH H
Sbjct: 89 LDVLPDYLVRDRVVAVGEVGYDAMTP-----QEDKAFTVQLELAVRHALPVLVHTPH 140
>gi|1653166|dbj|BAA18082| (D90911) hypothetical protein
[Synechocystis sp.]
Length = 294
Score = 32.5 bits (72), Expect = 4.4
Identities = 28/76 (36%), Positives = 36/76 (46%), Gaps = 12/76 (15%)
Frame = +2
Query: 113 YPQSL--QLNGQSYAPFARKHQDSIQLT-----DCTR---CF*QNITQRTYMHCETG*NT 262
YPQSL QL G R +++L DC R F QN+TQ+ Y HC
Sbjct: 105 YPQSLAQQLRGYLVPYEGRLDPVAVELAQDIAHDCQRQPIAFLQNLTQKLYEHC------ 158
Query: 263 NAPAQLANAAWTS--TWKD*TGRCSTLT 340
+ W + TW+ G C LT
Sbjct: 159 TYTVRAIGEPWEAGVTWRSREGSCRDLT 186
>gi|2500548|sp|Q17632|DIS3_CAEEL DIS3 PROTEIN HOMOLOG
>gi|3873904|emb|CAA94677.1| (Z70718) predicted using
Genefinder; Similarity to S.pombe mitotic control
protein DIS3 (SW:DIS3_SCHPO); cDNA EST EMBL:D34017 comes
from this gene; cDNA EST EMBL:D37007 comes from this
gene; cDNA EST EMBL:D67423 comes from th...
Length = 1029
Score = 32.5 bits (72), Expect = 4.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 273 RNWRMRLGLLLGRTEQGDAAHLLHPSTDACARVRIASDCA 392
RNWR G+LL T +G HL P+ R+RI ++ A
Sbjct: 360 RNWREYCGMLLPSTVKGARRHLFCPAERLIPRIRIETEQA 399
Database: nr
Posted date: Jan 18, 2000 12:56 PM
Number of letters in database: 136,619,797
Number of sequences in database: 443,958
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204772113
Number of Sequences: 443958
Number of extensions: 4484795
Number of successful extensions: 15294
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 15166
Number of HSP's gapped (non-prelim): 74
length of query: 261
length of database: 136,619,797
effective HSP length: 54
effective length of query: 206
effective length of database: 112,646,065
effective search space: 23205089390
effective search space used: 23205089390
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 69 (31.3 bits)