BLASTX 2.0.10 [Aug-26-1999]
Query= XF-0.5-GL2963
(345 letters)
Database: nr
443,958 sequences; 136,619,797 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|4761618|gb|AAD29424.1|AF136451_1 (AF136451) fibronectin-bind... 34 0.60
gi|3319361 (AF077408) contains similarity to Arabidopsis thalia... 31 3.0
gi|2496482|sp|Q49736|YY01_MYCLE HYPOTHETICAL 88.1 KD PROTEIN B1... 31 4.0
gi|1076685|pir||S51529 SPF1 protein - sweet potato >gi|484261|d... 31 4.0
gi|5852122|emb|CAB55367.1| (AL117260) putative tubulin-tyrosine... 31 4.0
gi|2496481|sp|Q50724|YY01_MYCTU HYPOTHETICAL 87.3 KD PROTEIN RV... 31 4.0
gi|913989|bbs|164354 (S77088) polyprotein(CP=capsid protein, NI... 31 5.2
gi|295825|emb|CAA33817| (X15819) nitrate reductase apoenzyme [O... 30 6.8
gi|128186|sp|P16081|NIA1_ORYSA NITRATE REDUCTASE 1 (NR1) >gi|82... 30 6.8
gi|4877911|gb|AAD31487.1|AF138794_1 (AF138794) serum opacity fa... 30 9.0
gi|4995870|emb|CAB44273.1| (AJ012314) Serum opacity factor 13 [... 30 9.0
>gi|4761618|gb|AAD29424.1|AF136451_1 (AF136451) fibronectin-binding
protein SFS [Streptococcus equi]
Length = 371
Score = 33.6 bits (75), Expect = 0.60
Identities = 19/64 (29%), Positives = 34/64 (52%), Gaps = 6/64 (9%)
Frame = -3
Query: 340 GLMASNGAGGHQKTSGVQP------NNDAPRAGCYTPLSGSPQRGNARPHGGTSPQSQE* 179
GL+ S G HQ QP ++ + ++ + +S P++ N +P P + +
Sbjct: 37 GLLGSLGGSSHQARPKEQPVSSIGDDDKSHKSSSDSMVSRPPKKDNLQPKPSDQPTNHQH 96
Query: 178 SAHAPAQPTA 149
A +P+QPTA
Sbjct: 97 QATSPSQPTA 106
>gi|3319361 (AF077408) contains similarity to Arabidopsis thaliana
retrotransposon Athila (GB:X81801) [Arabidopsis
thaliana]
Length = 512
Score = 31.3 bits (69), Expect = 3.0
Identities = 16/58 (27%), Positives = 25/58 (42%)
Frame = -3
Query: 331 ASNGAGGHQKTSGVQPNNDAPRAGCYTPLSGSPQRGNARPHGGTSPQSQE*SAHAPAQ 158
A G QK S + NDAP TP + R ++ +G + + A +PA+
Sbjct: 306 AEEDGGARQKPSTLASKNDAPAPDSRTPSKATSSRDPSKRYGDKKRKQSDKDARSPAR 363
>gi|2496482|sp|Q49736|YY01_MYCLE HYPOTHETICAL 88.1 KD PROTEIN
B1620_F1_30 >gi|2145697|pir||S72831 B1620_F1_30 protein
- Mycobacterium leprae >gi|466952 (U00015) B1620_F1_30
[Mycobacterium leprae]
Length = 792
Score = 30.9 bits (68), Expect = 4.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 300 LQECSQTTMLHALGVIRLCRDHLSAVTLGHMAERHRNRRSDLRMLQLS 157
L C+Q M +G + L D+ L + + HRN R L M L+
Sbjct: 627 LSACTQAVMCAEVGHLELAHDYAYEAALIDLRDLHRNTRDGLHMASLA 674
>gi|1076685|pir||S51529 SPF1 protein - sweet potato
>gi|484261|dbj|BAA06278| (D30038) SPF1 protein [Ipomoea
batatas]
Length = 549
Score = 30.9 bits (68), Expect = 4.0
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -3
Query: 331 ASNGAGGHQKTSGVQPNNDAPRAGCYTPLSGSPQRGNARPHGGTSPQSQ 185
A+ G+G H G PNN+A A P + S Q P T P Q
Sbjct: 446 AARGSGSHGLNRGANPNNNAAMAMAIRPSTMSLQSNYPIPIPSTRPMQQ 494
>gi|5852122|emb|CAB55367.1| (AL117260) putative tubulin-tyrosine
ligase [Leishmania major]
Length = 638
Score = 30.9 bits (68), Expect = 4.0
Identities = 18/63 (28%), Positives = 29/63 (45%)
Frame = -3
Query: 211 HGGTSPQSQE*SAHAPAQPTA*WLTRSRVLVASLCAACRHDRSSNAPRRTSEGARETSES 32
H GT+ S + H P + LT V +SLC +R++ AP + + A T +
Sbjct: 77 HTGTASSSSPTTQHEPKVGRSSSLTGGAVCSSSLCVTSARERATTAPLQRIKSATCTEKR 136
Query: 31 RLF 23
R +
Sbjct: 137 RKY 139
>gi|2496481|sp|Q50724|YY01_MYCTU HYPOTHETICAL 87.3 KD PROTEIN RV3401
>gi|1449386|emb|CAB01022| (Z77165) hypothetical protein
Rv3401 [Mycobacterium tuberculosis]
Length = 786
Score = 30.9 bits (68), Expect = 4.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 300 LQECSQTTMLHALGVIRLCRDHLSAVTLGHMAERHRNRRSDLRMLQLS 157
L C+Q M +G + L D+ L + + HRN R L M L+
Sbjct: 627 LSACTQAVMCAEVGHLELAHDYAYEAALIDLRDLHRNTRDGLHMASLA 674
>gi|913989|bbs|164354 (S77088) polyprotein(CP=capsid protein,
NIb=nuclear inclusion protein) [maize dwarf mosaic virus
MDMV, Peptide Partial, 340 aa] [Maize dwarf mosaic
virus]
Length = 340
Score = 30.5 bits (67), Expect = 5.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 322 GAGGHQKTSGVQPNNDAPRAGCYTPLSGSPQRGNARPHGGTS 197
GA G SG P G TP +G+P +GN P G S
Sbjct: 34 GAQGGGSGSGTTPPATGSGTGTRTPSTGTPAQGNTPPASGGS 75
>gi|295825|emb|CAA33817| (X15819) nitrate reductase apoenzyme [Oryza
sativa]
Length = 393
Score = 30.1 bits (66), Expect = 6.8
Identities = 17/53 (32%), Positives = 26/53 (48%), Gaps = 1/53 (1%)
Frame = -3
Query: 340 GLMASNGAGGHQKTSGVQPNNDAPRAGC-YTPLSGSPQRGNARPHGGTSPQSQE 182
G +SNGA + +G+ D+P GC + PL P R P G+ + +E
Sbjct: 22 GAASSNGAKAYPPANGIPRRADSPVRGCGFPPLVSPPPR--KPPSDGSDDEEEE 73
>gi|128186|sp|P16081|NIA1_ORYSA NITRATE REDUCTASE 1 (NR1)
>gi|82490|pir||S07554 nitrate reductase (NADH) (EC
1.6.6.1) - rice
Length = 916
Score = 30.1 bits (66), Expect = 6.8
Identities = 17/53 (32%), Positives = 26/53 (48%), Gaps = 1/53 (1%)
Frame = -3
Query: 340 GLMASNGAGGHQKTSGVQPNNDAPRAGC-YTPLSGSPQRGNARPHGGTSPQSQE 182
G +SNGA + +G+ D+P GC + PL P R P G+ + +E
Sbjct: 22 GAASSNGAKAYPPANGIPRRADSPVRGCGFPPLVSPPPR--KPPSDGSDDEEEE 73
>gi|4877911|gb|AAD31487.1|AF138794_1 (AF138794) serum opacity factor
precursor [Streptococcus pyogenes]
Length = 215
Score = 29.7 bits (65), Expect = 9.0
Identities = 25/97 (25%), Positives = 38/97 (38%)
Frame = -3
Query: 331 ASNGAGGHQKTSGVQPNNDAPRAGCYTPLSGSPQRGNARPHGGTSPQSQE*SAHAPAQPT 152
A++GAG + V P+ + +G TP S PQ A TS S S+ P
Sbjct: 46 AASGAGSESSDASVVPSEGSQSSGTTTPASKQPQAQTA--PAATSASSTSSSSSDGKAPQ 103
Query: 151 A*WLTRSRVLVASLCAACRHDRSSNAPRRTSEGARET 41
A ++ S A + + A +T + R T
Sbjct: 104 AATISTSSTPAAGTSSNSNQVTGTEAEPQTMDVERYT 140
>gi|4995870|emb|CAB44273.1| (AJ012314) Serum opacity factor 13
[Streptococcus pyogenes]
Length = 409
Score = 29.7 bits (65), Expect = 9.0
Identities = 25/97 (25%), Positives = 38/97 (38%)
Frame = -3
Query: 331 ASNGAGGHQKTSGVQPNNDAPRAGCYTPLSGSPQRGNARPHGGTSPQSQE*SAHAPAQPT 152
A++GAG + V P+ + +G TP S PQ A TS S S+ P
Sbjct: 12 AASGAGSESSDASVVPSEGSQSSGTTTPASKQPQAQTA--PAATSASSTSSSSSDGKAPQ 69
Query: 151 A*WLTRSRVLVASLCAACRHDRSSNAPRRTSEGARET 41
A ++ S A + + A +T + R T
Sbjct: 70 AATISTSSTPAAGTSSNSNQVTGTEAEPQTMDVERYT 106
Database: nr
Posted date: Jan 18, 2000 12:56 PM
Number of letters in database: 136,619,797
Number of sequences in database: 443,958
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85964448
Number of Sequences: 443958
Number of extensions: 1682974
Number of successful extensions: 4981
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4974
Number of HSP's gapped (non-prelim): 12
length of query: 115
length of database: 136,619,797
effective HSP length: 51
effective length of query: 63
effective length of database: 113,977,939
effective search space: 7180610157
effective search space used: 7180610157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 65 (29.7 bits)