BLASTX 2.0.10 [Aug-26-1999]
Query= XF-0.4-GL1759
(540 letters)
Database: nr
443,958 sequences; 136,619,797 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|1173053|sp|P44346|RL5_HAEIN 50S RIBOSOMAL PROTEIN L5 >gi|107... 243 1e-63
gi|1173052|sp|P46178|RL5_ACYKS 50S RIBOSOMAL PROTEIN L5 >gi|632... 241 4e-63
gi|132993|sp|P02389|RL5_ECOLI 50S RIBOSOMAL PROTEIN L5 >gi|4298... 239 1e-62
gi|71098|pir||R5EC5 ribosomal protein L5 - Escherichia coli 235 2e-61
gi|4512416|dbj|BAA75283.1| (AB017508) rplE homologue (identity ... 226 1e-58
gi|132987|sp|P08895|RL5_BACST 50S RIBOSOMAL PROTEIN L5 >gi|7110... 219 1e-56
gi|1652415|dbj|BAA17337| (D90905) 50S ribosomal protein L5 [Syn... 216 9e-56
gi|3123273|sp|P73308|RL5_SYNY3 50S RIBOSOMAL PROTEIN L5 216 9e-56
gi|6094083|sp|O67568|RL5_AQUAE 50S RIBOSOMAL PROTEIN L5 >gi|298... 216 1e-55
gi|132988|sp|P12877|RL5_BACSU 50S RIBOSOMAL PROTEIN L5 (BL6) >g... 215 3e-55
gi|730568|sp|P41201|RL5_THEFL 50S RIBOSOMAL PROTEIN L5 >gi|2431... 214 4e-55
gi|3122744|sp|O24701|RL5_SYNP6 50S RIBOSOMAL PROTEIN L5 >gi|244... 211 3e-54
gi|4165876 (AF040101) ribosomal protein L5 [Aquifex pyrophilus] 211 4e-54
gi|6226693|sp|P38517|RL5_THEMA 50S RIBOSOMAL PROTEIN L5 >gi|498... 208 3e-53
gi|6226008|sp|Q9ZCR7|RL5_RICPR 50S RIBOSOMAL PROTEIN L5 >gi|386... 207 5e-53
gi|6457997|gb|AAF09904.1|AE001892_15 (AE001892) ribosomal prote... 206 8e-53
gi|5163216|gb|AAD40595.1|AF115283_14 (AF115283) ribosomal prote... 206 1e-52
gi|133002|sp|P24315|RL5_THETH 50S RIBOSOMAL PROTEIN L5 >gi|9472... 206 1e-52
gi|3980234|emb|CAA79789| (Z21677) ribosomal protein L5 [Thermot... 206 1e-52
gi|481940|pir||S40200 ribosomal protein L5 - Thermotoga maritima 205 2e-52
gi|1350652|sp|P14807|RK5_CYAPA CYANELLE 50S RIBOSOMAL PROTEIN L... 204 5e-52
gi|3914663|sp|O46906|RK5_GUITH CHLOROPLAST 50S RIBOSOMAL PROTEI... 203 1e-51
gi|71102|pir||R5KT5 ribosomal protein L5 - Cyanophora paradoxa ... 202 2e-51
gi|417671|sp|P33098|RL5_MICLU 50S RIBOSOMAL PROTEIN L5 >gi|3220... 200 6e-51
gi|1710476|sp|P51302|RK5_PORPU CHLOROPLAST 50S RIBOSOMAL PROTEI... 199 1e-50
gi|6094089|sp|O83231|RL5_TREPA 50S RIBOSOMAL PROTEIN L5 >gi|332... 199 2e-50
gi|3024534|sp|P56362|RK5_CHLVU CHLOROPLAST 50S RIBOSOMAL PROTEI... 198 3e-50
gi|3122750|sp|O32995|RL5_MYCLE 50S RIBOSOMAL PROTEIN L5 >gi|234... 197 5e-50
gi|3219844|sp|P95064|RL5_MYCTU 50S RIBOSOMAL PROTEIN L5 >gi|180... 196 1e-49
gi|132998|sp|P10136|RL5_MYCCA 50S RIBOSOMAL PROTEIN L5 >gi|7110... 194 3e-49
gi|2191128 (AF007269) belongs to the L5P family of ribosomal pr... 192 2e-48
gi|1350758|sp|P47409|RL5_MYCGE 50S RIBOSOMAL PROTEIN L5 >gi|136... 191 4e-48
gi|3914767|sp|O51443|RL5_BORBU 50S RIBOSOMAL PROTEIN L5 >gi|268... 187 6e-47
gi|5880700|gb|AAD54793.1|AF137379_16 (AF137379) ribosomal prote... 185 2e-46
gi|2500237|sp|Q50306|RL5_MYCPN 50S RIBOSOMAL PROTEIN L5 >gi|212... 185 2e-46
gi|3914769|sp|O52344|RL5_MYCGA 50S RIBOSOMAL PROTEIN L5 >gi|276... 182 3e-45
gi|6466337|gb|AAF12919.1|AF022186_41 (AF022186) unknown; 50S ri... 178 4e-44
gi|132994|sp|P21510|RK5_EUGGR CHLOROPLAST 50S RIBOSOMAL PROTEIN... 175 2e-43
gi|3777600 (AF095708) 50S ribosomal protein L5 [Oryza sativa] 172 2e-42
gi|132986|sp|P14757|RK5_ASTLO CHLOROPLAST 50S RIBOSOMAL PROTEIN... 171 4e-42
gi|4155819 (AE001547) 50S RIBOSOMAL PROTEIN L5 [Helicobacter py... 162 2e-39
gi|4376933|gb|AAD18774| (AE001647) L5 Ribosomal Protein [Chlamy... 160 7e-39
gi|2500236|sp|P56033|RL5_HELPY 50S RIBOSOMAL PROTEIN L5 >gi|231... 159 2e-38
gi|3328953|gb|AAC68117.1| (AE001323) L5 Ribosomal Protein [Chla... 155 2e-37
gi|3914786|sp|O21252|RM05_RECAM MITOCHONDRIAL 60S RIBOSOMAL PRO... 151 4e-36
gi|132990|sp|P28531|RL5_CHLTR 50S RIBOSOMAL PROTEIN L5 >gi|2821... 141 3e-33
gi|1350653|sp|P49547|RK5_ODOSI CHLOROPLAST 50S RIBOSOMAL PROTEI... 138 3e-32
gi|4927752|gb|AAD33268.1|AF126059_9 (AF126059) RpL5 [Streptococ... 112 2e-24
gi|6066166|gb|AAF03184.1|AF110138_16 (AF110138) ribosomal prote... 98 7e-20
gi|6094088|sp|O59431|RL5_PYRHO 50S RIBOSOMAL PROTEIN L5P >gi|32... 86 2e-16
gi|730567|sp|P41202|RL5_SULAC 50S RIBOSOMAL PROTEIN L5P >gi|243... 86 2e-16
gi|6320443|ref|NP_010523.1|MRPL7| Mitochondrial ribosomal prote... 85 3e-16
gi|5457760|emb|CAB49250.1| (AJ248284) LSU ribosomal protein L5P... 85 5e-16
gi|1710572|sp|P54040|RL5_METJA 50S RIBOSOMAL PROTEIN L5P >gi|21... 84 9e-16
gi|132996|sp|P14124|RL5_HALMA 50S RIBOSOMAL PROTEIN L5P (HMAL5)... 81 6e-15
gi|6015772|emb|CAB57599.1| (Y18930) ribosomal protein L5 (HMAL5... 80 1e-14
gi|6685887|sp|Q9YF87|RL5_AERPE 50S RIBOSOMAL PROTEIN L5P >gi|51... 79 3e-14
gi|3219845|sp|O14337|RM07_SCHPO PROBABLE 60S RIBOSOMAL PROTEIN ... 79 3e-14
gi|132997|sp|P14029|RL5_METVA 50S RIBOSOMAL PROTEIN L5P >gi|711... 77 1e-13
gi|3122747|sp|O26124|RL5_METTH 50S RIBOSOMAL PROTEIN L5P >gi|26... 75 4e-13
gi|3914744|sp|O28367|RL5_ARCFU 50S RIBOSOMAL PROTEIN L5P >gi|26... 72 3e-12
gi|2500239|sp|Q56231|RL5_THEAC 50S RIBOSOMAL PROTEIN L5P >gi|13... 67 1e-10
gi|1710494|sp|Q10157|RL11_SCHPO 60S RIBOSOMAL PROTEIN L11 >gi|1... 67 1e-10
gi|1173080|sp|P46749|RM05_PROWI MITOCHONDRIAL 60S RIBOSOMAL PRO... 66 2e-10
gi|417681|sp|P26860|RM05_MARPO MITOCHONDRIAL 60S RIBOSOMAL PROT... 64 1e-09
gi|6325359|ref|NP_015427.1|RPL11A| Ribosomal protein L11A (L16A... 64 1e-09
gi|6321522|ref|NP_011599.1|RPL11B| 60S ribosomal protein L11B (... 64 1e-09
gi|1173055|sp|P46287|RL11_MEDSA 60S RIBOSOMAL PROTEIN L11 (L5) ... 63 2e-09
gi|4322|emb|CAA25515| (X01029) ribosomal protein L16 [Saccharom... 62 3e-09
gi|6470325|gb|AAF13719.1|AF201080_1 (AF201080) ribosomal protei... 62 3e-09
gi|1172817|sp|P42796|R112_ARATH 60S RIBOSOMAL PROTEIN L11B (L16... 62 4e-09
gi|4586222|emb|CAB40967.1| (AJ238271) ribosomal protein L11 [Or... 61 6e-09
gi|1172816|sp|P42795|R111_ARATH 60S RIBOSOMAL PROTEIN L11A (L16... 61 6e-09
gi|1172969|sp|P42794|RL11_ARATH 60S RIBOSOMAL PROTEIN L11 (L16)... 60 1e-08
gi|6226544|sp|P39026|RL11_HUMAN 60S RIBOSOMAL PROTEIN L11 >gi|7... 60 2e-08
gi|4506595|ref|NP_000966.1|| ribosomal protein L11 >gi|631361|p... 57 8e-08
gi|3914659|sp|Q29205|RL11_PIG 60S RIBOSOMAL PROTEIN L11 56 2e-07
gi|132999|sp|P20031|RL5_PROVU 50S RIBOSOMAL PROTEIN L5 >gi|5519... 55 6e-07
gi|6093997|sp|O22540|RL11_ORYSA 60S RIBOSOMAL PROTEIN L11 >gi|2... 53 2e-06
gi|1350760|sp|P49623|RL5_SERMA 50S RIBOSOMAL PROTEIN L5 >gi|551... 53 2e-06
gi|132777|sp|P24119|RL11_TETTH 60S RIBOSOMAL PROTEIN L11 (L21) ... 52 3e-06
gi|585888|sp|P37436|RL5_SALTY 50S RIBOSOMAL PROTEIN L5 >gi|5520... 52 4e-06
gi|4512679|gb|AAD21733.1| (AC006931) 60S ribosomal protein L11B... 51 8e-06
gi|2500241|sp|Q94793|RL11_TOXCA 60S RIBOSOMAL PROTEIN L11 >gi|1... 50 2e-05
gi|1246369|dbj|BAA12249.1| (D84173) ribosomal protein L11 [Para... 48 4e-05
gi|4504489|ref|NP_000403.1|| histidine-rich glycoprotein >gi|12... 34 1.2
gi|123530|sp|P04929|HRPX_PLALO HISTIDINE-RICH GLYCOPROTEIN PREC... 33 2.0
gi|3024322|sp|Q91994|OTX1_BRARE HOMEOBOX PROTEIN OTX1 (ZOTX1) >... 32 2.7
gi|1839437|bbs|177742 otx1=orthodenticle homeobox homolog {C-te... 32 2.7
>gi|1173053|sp|P44346|RL5_HAEIN 50S RIBOSOMAL PROTEIN L5
>gi|1075256|pir||H64093 ribosomal protein L5 (rpL5)
homolog - Haemophilus influenzae (strain Rd KW20)
>gi|1573800 (U32762) ribosomal protein L5 (rpL5)
[Haemophilus influenzae Rd]
Length = 179
Score = 243 bits (613), Expect = 1e-63
Identities = 113/178 (63%), Positives = 146/178 (81%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M +L + Y+ +VV L +FGY + M VPR+ KITLNMGVGEA T+KK+L+NAVAD+A I
Sbjct: 1 MAKLHDYYRDQVVSELKNKFGYKSVMQVPRIEKITLNMGVGEALTDKKLLDNAVADLAAI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
SGQ+P+VTK+R SVA FKIR G+PIGCK TLR +M+EF +RLI I++P +RDFRG+ +
Sbjct: 61 SGQKPLVTKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
SFDGRGN++MGV+EQ++FPEID+D VD +RG+DI ITTTA +D E +ALL AFNFPFR
Sbjct: 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKNDEEGQALLAAFNFPFR 178
>gi|1173052|sp|P46178|RL5_ACYKS 50S RIBOSOMAL PROTEIN L5
>gi|632227|pir||JC2278 ribosomal protein L5 - Pea aphid
symbiont bacterium >gi|710617|dbj|BAA06587| (D31786)
ribosomal protein L5 [Acyrthosiphon kondoi endosymbiont]
Length = 179
Score = 241 bits (608), Expect = 4e-63
Identities = 111/178 (62%), Positives = 146/178 (81%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M +L + YK EV+ L+ +F Y++ M VPR+ KITLNMGVGEA +KK+L+NA AD+A I
Sbjct: 1 MAKLHDYYKDEVIKQLMSQFDYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
SGQ+P++TK+R SVA FKIR G+PIGCK TLR +M+EF +RLI+I++P +RDFRG+ +
Sbjct: 61 SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLISIAVPRIRDFRGLSAK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
SFDGRGN++MGV+EQ++FPEID+D VD +RG+DI ITTTA SD E +ALL AFNFPFR
Sbjct: 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDDEGRALLAAFNFPFR 178
>gi|132993|sp|P02389|RL5_ECOLI 50S RIBOSOMAL PROTEIN L5
>gi|42981|emb|CAA25717| (X01563) L5 (rp1E) (aa 1-179)
[Escherichia coli] >gi|606242|gb|AAA58105.1| (U18997)
50S ribosomal subunit protein L5 [Escherichia coli]
>gi|1789704 (AE000408) 50S ribosomal subunit protein L5
[Escherichia coli]
Length = 179
Score = 239 bits (603), Expect = 1e-62
Identities = 111/178 (62%), Positives = 144/178 (80%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M +L + YK EVV L+ F Y++ M VPR+ KITLNMGVGEA +KK+L+NA AD+A I
Sbjct: 1 MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
SGQ+P++TK+R SVA FKIR G+PIGCK TLR +M+EF +RLI I++P +RDFRG+ +
Sbjct: 61 SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
SFDGRGN++MGV+EQ++FPEID+D VD +RG+DI ITTTA SD E +ALL AF+FPFR
Sbjct: 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFR 178
>gi|71098|pir||R5EC5 ribosomal protein L5 - Escherichia coli
Length = 178
Score = 235 bits (593), Expect = 2e-61
Identities = 109/176 (61%), Positives = 143/176 (80%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
+L + YK EVV L+ F Y++ M VPR+ KITLNMGVGEA +KK+L+NA AD+A ISG
Sbjct: 2 KLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISG 61
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+P++TK+R SVA FKIR G+PIGCK TLR +M+EF +RLI I++P +RDFRG+ +SF
Sbjct: 62 QKPLITKARKSVAGFKIRQGYPIGCKVTLRGQRMWEFFERLITIAVPRIRDFRGLSAKSF 121
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
DGRG+++MGV+EQ++FPEID+D VD +RG+DI ITTTA SD E +ALL AF+FPFR
Sbjct: 122 DGRGDYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFR 177
>gi|4512416|dbj|BAA75283.1| (AB017508) rplE homologue (identity of
86% to B. subtilis ) [Bacillus halodurans]
Length = 179
Score = 226 bits (569), Expect = 1e-58
Identities = 102/178 (57%), Positives = 140/178 (78%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M RL+ Y+KE+VP+L ++F YS+ MAVP+L KI +NMGVG+A N K L+ AV ++ +I
Sbjct: 1 MNRLKEKYQKEIVPSLTEKFNYSSVMAVPKLEKIVVNMGVGDAVQNAKALDKAVEELTEI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
+GQ+PI+TK++ S+A FK+R G PIG K TLR +MYEFLD+LI++SLP VRDFRGI +
Sbjct: 61 TGQKPIITKAKKSIAGFKLREGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGISKK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
+FDGRGN+ +GVKEQ++FPEID+D VD +RGMD+ I TTA++D EA+ LL PF+
Sbjct: 121 AFDGRGNYTLGVKEQLIFPEIDYDKVDKVRGMDVVIVTTASTDEEARELLSQMGMPFQ 178
>gi|132987|sp|P08895|RL5_BACST 50S RIBOSOMAL PROTEIN L5
>gi|71100|pir||R5BS5F ribosomal protein L5 - Bacillus
stearothermophilus
Length = 179
Score = 219 bits (552), Expect = 1e-56
Identities = 99/178 (55%), Positives = 137/178 (76%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M RL+ Y KEVVPAL+ +F Y + M VP++ KI +NMGVG+A N K L++AV ++ I
Sbjct: 1 MNRLKEKYVKEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
+GQRP+VT+++ S+A F++R G PIG K TLR +MYEFLD+LI++SLP VRDFRG+ +
Sbjct: 61 AGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGVSKK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
+FDGRGN+ +G+KEQ++FPEID+D V+ +RGMDI I TTAN+D EA+ LL PF+
Sbjct: 121 AFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTANTDEEARELLALLGMPFQ 178
>gi|1652415|dbj|BAA17337| (D90905) 50S ribosomal protein L5
[Synechocystis sp.]
Length = 200
Score = 216 bits (545), Expect = 9e-56
Identities = 94/177 (53%), Positives = 138/177 (77%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ +Y++ ++P L + FGY N VP+L K+T+N G+GEA+ N K LE+++ ++A I+G
Sbjct: 24 RLKTLYQETILPKLQEEFGYKNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITG 83
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+P+VT++R ++A FKIR G P+G TLR +MY FLDRLIN++LP +RDFRGI P SF
Sbjct: 84 QKPVVTRARKAIAGFKIREGMPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSF 143
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
DGRGN+++G++EQ++FPEID+D +D IRGMD++I T+A +D E +ALL A PFR+
Sbjct: 144 DGRGNYSLGIREQLIFPEIDYDTIDQIRGMDVSIITSAQTDEEGRALLKALGMPFRS 200
>gi|3123273|sp|P73308|RL5_SYNY3 50S RIBOSOMAL PROTEIN L5
Length = 180
Score = 216 bits (545), Expect = 9e-56
Identities = 94/177 (53%), Positives = 138/177 (77%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ +Y++ ++P L + FGY N VP+L K+T+N G+GEA+ N K LE+++ ++A I+G
Sbjct: 4 RLKTLYQETILPKLQEEFGYKNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITG 63
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+P+VT++R ++A FKIR G P+G TLR +MY FLDRLIN++LP +RDFRGI P SF
Sbjct: 64 QKPVVTRARKAIAGFKIREGMPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSF 123
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
DGRGN+++G++EQ++FPEID+D +D IRGMD++I T+A +D E +ALL A PFR+
Sbjct: 124 DGRGNYSLGIREQLIFPEIDYDTIDQIRGMDVSIITSAQTDEEGRALLKALGMPFRS 180
>gi|6094083|sp|O67568|RL5_AQUAE 50S RIBOSOMAL PROTEIN L5 >gi|2983983
(AE000749) ribosomal protein L05 [Aquifex aeolicus]
Length = 188
Score = 216 bits (544), Expect = 1e-55
Identities = 101/177 (57%), Positives = 133/177 (75%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL YK+EVVP L K+F Y +PM +PRL KI +NMGVGEA + + LE AV D+ I+G
Sbjct: 11 RLYKKYKEEVVPILQKKFNYKSPMQIPRLQKIVVNMGVGEAVQDIRQLERAVEDLRAITG 70
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+P++T++R S A FK+R G PIGCK TLR+ +M++FLD+LI+++LP V+DF+G+ PRSF
Sbjct: 71 QQPVITRARKSEAGFKLRKGMPIGCKVTLRKERMWDFLDKLISVALPRVKDFKGLSPRSF 130
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
DGRGN+ G+ EQ+VFPEID+D VD IRGMDI I TTA +D EA LL P R+
Sbjct: 131 DGRGNYAFGIAEQIVFPEIDYDKVDRIRGMDIIINTTAETDEEAFWLLSLLGLPIRS 187
>gi|132988|sp|P12877|RL5_BACSU 50S RIBOSOMAL PROTEIN L5 (BL6)
>gi|71099|pir||R5BS5 ribosomal protein L5 - Bacillus
subtilis >gi|40152|emb|CAA33703| (X15664) L5 protein (AA
1-179) [Bacillus subtilis] >gi|1044976 (L47971)
ribosomal protein L5 [Bacillus subtilis]
>gi|2632395|emb|CAB11904| (Z99104) ribosomal protein L5
(BL6) [Bacillus subtilis]
Length = 179
Score = 215 bits (541), Expect = 3e-55
Identities = 95/178 (53%), Positives = 135/178 (75%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M RL+ Y KE+ PAL+ +F Y + M VP++ KI +NMGVG+A N K +++AV ++ I
Sbjct: 1 MNRLKEKYNKEIAPALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAIDSAVEELTFI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
+GQ+P+VT+++ S+A F++R G PIG K TLR +MY+FLD+LI++SLP VRDFRG+ +
Sbjct: 61 AGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGVSKK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
SFDGRGN+ +G+KEQ++FPEID+D V +RGMDI I TTAN+D EA+ LL PF+
Sbjct: 121 SFDGRGNYTLGIKEQLIFPEIDYDKVTKVRGMDIVIVTTANTDEEARELLTQVGMPFQ 178
>gi|730568|sp|P41201|RL5_THEFL 50S RIBOSOMAL PROTEIN L5
>gi|243183|bbs|77829 (S77826) ribosomal protein L5
[Thermus flavus, Peptide, 182 aa] [Thermus aquaticus
flavus]
Length = 182
Score = 214 bits (540), Expect = 4e-55
Identities = 95/175 (54%), Positives = 137/175 (78%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L+ Y +EV P LI+RFGY N VPRL K+ +N G+GEA + ++LE A ++A I+GQ
Sbjct: 7 LKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQ 66
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+P VT+++ S+++FK+R G PIG + TLRR +M+ FL++L+N++LP +RDFRG+ P SFD
Sbjct: 67 KPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFD 126
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
GRGN+N+G++EQ++FPEI +D VDA+RGMDIA+ TTA +D EA+ALL+ FPFR
Sbjct: 127 GRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFR 181
>gi|3122744|sp|O24701|RL5_SYNP6 50S RIBOSOMAL PROTEIN L5
>gi|2446902|dbj|BAA22461| (AB000111) 50S ribosomal
protein L5 [Synechococcus sp.]
Length = 179
Score = 211 bits (532), Expect = 3e-54
Identities = 96/175 (54%), Positives = 135/175 (76%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L+ Y+ +VP L+K FGY+N VP++VK+T+N G+GE A N K LE+++A++AKI+GQ
Sbjct: 3 LKTKYRDIIVPKLMKEFGYTNIHQVPKVVKVTINRGLGEGAQNAKALESSLAEIAKIAGQ 62
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+P+VT+++ ++A FKIR G P+G TLR + FL+RLIN+SLP +RDFRGI PRSFD
Sbjct: 63 KPVVTRAKKAIAGFKIRAGMPVGLMVTLRGDRRDAFLERLINLSLPRIRDFRGISPRSFD 122
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
GRGN+ +G++EQ++FPEI +D++D IRGMDI I T+ANSD E +ALL PFR
Sbjct: 123 GRGNYTLGLREQLIFPEITYDSIDQIRGMDITIVTSANSDEEGRALLRELGMPFR 177
>gi|4165876 (AF040101) ribosomal protein L5 [Aquifex pyrophilus]
Length = 203
Score = 211 bits (531), Expect = 4e-54
Identities = 100/164 (60%), Positives = 128/164 (77%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL YK+EVVP LI++F Y NPM VPRLVKI +NMGVGEA + K LE AV D+ I+G
Sbjct: 11 RLYKKYKEEVVPKLIQKFQYKNPMQVPRLVKIVVNMGVGEAVQDIKQLERAVEDLRAITG 70
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+P++T++R S A FK+R G PIGCK TLR M++FLD++I+++LP V+DF+G+ PRSF
Sbjct: 71 QQPMITRARKSKAGFKLRKGMPIGCKVTLRNHTMWDFLDKVISVALPRVKDFKGLNPRSF 130
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEA 498
DGRGN+ G+ EQ+VFPEID+D VD IRGMDI I TTA SD E+
Sbjct: 131 DGRGNYAFGIAEQIVFPEIDYDKVDRIRGMDIIINTTAVSDQES 174
>gi|6226693|sp|P38517|RL5_THEMA 50S RIBOSOMAL PROTEIN L5
>gi|4982052|gb|AAD36554.1|AE001798_19 (AE001798)
ribosomal protein L5 [Thermotoga maritima]
Length = 184
Score = 208 bits (524), Expect = 3e-53
Identities = 98/175 (56%), Positives = 133/175 (76%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L++ Y+KE+VPAL+K F Y N VP+LVKI +NMG+GE + N ++E ++AKI+GQ
Sbjct: 8 LKDQYEKEIVPALMKEFNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQ 67
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+PIVT++R S+++FKIR G PIG K TLR ++MY FL +LINI LP VRDFRG+ P SFD
Sbjct: 68 KPIVTRARKSISNFKIRKGMPIGLKVTLRGARMYNFLYKLINIVLPKVRDFRGLDPNSFD 127
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
GRGN++ G+ EQ+VFPE++ D V I+GMDI I TTA +D EA+ LL+ F PF+
Sbjct: 128 GRGNYSFGLSEQLVFPELNPDEVRRIQGMDITIVTTAKTDQEARRLLELFGMPFK 182
>gi|6226008|sp|Q9ZCR7|RL5_RICPR 50S RIBOSOMAL PROTEIN L5
>gi|3861187|emb|CAA15087| (AJ235272) 50S RIBOSOMAL
PROTEIN L5 (rplE) [Rickettsia prowazekii]
Length = 179
Score = 207 bits (522), Expect = 5e-53
Identities = 92/179 (51%), Positives = 133/179 (73%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M R + +YK++++ +L K F + N +P++ KI +NMGVGEA + KV+ NA+ D+ I
Sbjct: 1 MLRFKELYKQKIIESLKKEFSFKNKHEIPKIKKIVINMGVGEAIADSKVINNALNDLTLI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
SGQ+P+VT +R S+A+FK+R IGCK TLR+ +MY+FL+RL+ ++LP V++FRG +
Sbjct: 61 SGQKPVVTLARKSIATFKLRENMKIGCKVTLRKDRMYDFLERLVIVALPRVKEFRGFSYK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
SFDG+GNF G+KEQ+VFPEI++D +D IRGMDI I T+A +D E+K LL FN PF N
Sbjct: 121 SFDGKGNFTFGLKEQIVFPEINYDKIDTIRGMDITIVTSAKTDQESKFLLSGFNLPFYN 179
>gi|6457997|gb|AAF09904.1|AE001892_15 (AE001892) ribosomal protein
L5 [Deinococcus radiodurans]
Length = 180
Score = 206 bits (520), Expect = 8e-53
Identities = 94/178 (52%), Positives = 134/178 (74%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M +L+ Y +V PAL+++FGYS+ MAVPR+ KI +N G+G + + K ++ A ++A I
Sbjct: 1 MQQLKTKYNDQVRPALMQQFGYSSVMAVPRIEKIVVNEGLGSSKEDSKAIDKAAKELALI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
+ Q+PI+TK++ S+++FK+R G P+G K TLR +MY FL++LINI LP +RDFRGI P
Sbjct: 61 TLQKPIITKAKKSISNFKLRQGMPVGIKVTLRGERMYVFLEKLINIGLPRIRDFRGINPN 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
+FDGRGN+N+G+KEQ++FPEI +D VD RGMDI I TTA +D EA+ALL + PFR
Sbjct: 121 AFDGRGNYNLGIKEQLIFPEITYDMVDKTRGMDITIVTTAKTDEEARALLQSMGLPFR 178
>gi|5163216|gb|AAD40595.1|AF115283_14 (AF115283) ribosomal protein
L5 [Leptospira interrogans]
Length = 182
Score = 206 bits (519), Expect = 1e-52
Identities = 97/177 (54%), Positives = 130/177 (72%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL YKKE+VP L K+F +S+ M VPRL KI LN+G+GEA TN K LE AV ++A I+G
Sbjct: 4 RLRTKYKKEIVPELNKKFKFSSIMQVPRLEKIVLNVGMGEAHTNPKALEAAVEELALITG 63
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
QRP+ TK++ S+A FKIR G +GC TLR MYEFLDRL+N++LP VRDF+G+ + F
Sbjct: 64 QRPVKTKAKKSIAGFKIREGMSLGCMVTLRGDYMYEFLDRLVNVALPRVRDFKGVSEKGF 123
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
DGRGN+NM +KEQV+FPEI D ++ + G+++ T + S+ EA +LL AF P+RN
Sbjct: 124 DGRGNYNMSIKEQVIFPEIKVDKINTLYGINMTFVTNSKSNEEAYSLLAAFGMPYRN 180
>gi|133002|sp|P24315|RL5_THETH 50S RIBOSOMAL PROTEIN L5
>gi|94726|pir||S15439 Ribosomal protein L5 - Thermus
aquaticus >gi|48106|emb|CAA39896| (X56552) ribosomal
protein L5 [Thermus aquaticus] >gi|243185|bbs|77832
(S77828) ribosomal protein L5 [Thermus aquaticus,
Peptide, 182 aa] [Thermus aquaticus]
Length = 182
Score = 206 bits (519), Expect = 1e-52
Identities = 93/175 (53%), Positives = 133/175 (75%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L+ Y EV P LI+RFGY N VPRL K+ +N G+GEA + ++LE A ++A I+GQ
Sbjct: 7 LKKKYYDEVRPELIRRFGYQNIWEVPRLEKVVINQGLGEAKEDARILEKASKELALIAGQ 66
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+P +T+++ S+++FK+R G PIG + TLR +M+ FL++L++++LP +RDFRG+ P SFD
Sbjct: 67 KPAITRAKKSISNFKLRKGMPIGLRVTLRGDRMWIFLEKLLSVALPRIRDFRGLNPNSFD 126
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
GRGN+N+G+KEQ++FPEI +D VD RGMDIA+ TTA +D EAKALL+ FPFR
Sbjct: 127 GRGNYNLGLKEQLIFPEITYDMVDVPRGMDIAVVTTAKTDEEAKALLELLGFPFR 181
>gi|3980234|emb|CAA79789| (Z21677) ribosomal protein L5 [Thermotoga
maritima]
Length = 184
Score = 206 bits (519), Expect = 1e-52
Identities = 97/175 (55%), Positives = 131/175 (74%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L++ Y+KE+VPAL+K Y N VP+LVKI +NMG+GE + N ++E ++AKI+GQ
Sbjct: 8 LKDQYEKEIVPALMKELNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQ 67
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+PIVT++R S+++FKIR G PIG K TLR ++MY FL +LINI LP VRDFRG+ P SFD
Sbjct: 68 KPIVTRARKSISNFKIRKGMPIGLKVTLRGARMYSFLYKLINIVLPKVRDFRGLDPNSFD 127
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
GRGN++ G+ EQ+VFPE+D D V I+GMDI I TTA +D E + LL+ F PF+
Sbjct: 128 GRGNYSFGLSEQLVFPELDPDEVRRIQGMDITIVTTAKTDQEVRRLLELFGMPFK 182
>gi|481940|pir||S40200 ribosomal protein L5 - Thermotoga maritima
Length = 184
Score = 205 bits (516), Expect = 2e-52
Identities = 96/175 (54%), Positives = 131/175 (74%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L++ Y+KE+VPAL+K Y N VP+LVKI +NMG+GE + N ++E ++AKI+GQ
Sbjct: 8 LKDQYEKEIVPALMKELNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQ 67
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+PIVT++R S+++FKIR G PIG K TLR ++MY FL +LINI LP VRDFRG+ P SFD
Sbjct: 68 KPIVTRARKSISNFKIRKGMPIGLKVTLRGARMYSFLYKLINIVLPKVRDFRGLDPNSFD 127
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
GRGN++ G+ EQ+VFPE+D D V I+GMD+ I TTA +D E + LL+ F PF+
Sbjct: 128 GRGNYSFGLSEQLVFPELDPDEVRRIQGMDMTIVTTAKTDQEVRRLLELFGMPFK 182
>gi|1350652|sp|P14807|RK5_CYAPA CYANELLE 50S RIBOSOMAL PROTEIN L5
>gi|336651 (M30487) ribosomal protein l5 [Cyanophora
paradoxa] >gi|1016136 (U30821) ribosomal protein L5
[Cyanophora paradoxa]
Length = 181
Score = 204 bits (513), Expect = 5e-52
Identities = 95/175 (54%), Positives = 132/175 (75%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ +Y++EV+ L+ RF Y N VP+L KIT+N G+GEAA N K+LE +V ++ +I+G
Sbjct: 4 RLKTVYEQEVIKQLMTRFQYKNIHEVPKLKKITVNRGLGEAAQNAKILEASVKEITEITG 63
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+ IVT+++ ++A FK+R PIG TLR MY FLDRLIN+SLP +RDFRGI +SF
Sbjct: 64 QKAIVTRAKKAIAGFKLRQDMPIGVMVTLRGDYMYAFLDRLINLSLPRIRDFRGITAKSF 123
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
DGRGN+N+G+KEQ++FPE+D+D ++ IRGMDI+I TTA +D E ALL + PF
Sbjct: 124 DGRGNYNLGLKEQLIFPEVDYDGIEQIRGMDISIVTTAKTDQEGLALLKSLGMPF 178
>gi|3914663|sp|O46906|RK5_GUITH CHLOROPLAST 50S RIBOSOMAL PROTEIN L5
>gi|3603054|gb|AAC35715| (AF041468) ribosomal protein L5
[Guillardia theta]
Length = 181
Score = 203 bits (510), Expect = 1e-51
Identities = 92/176 (52%), Positives = 132/176 (74%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L+ +Y ++V+P LI++F Y+N V ++ KITLN G+GEA+ N K+LE ++ + ISGQ
Sbjct: 5 LKEIYYQDVIPGLIEQFNYTNIHQVLKITKITLNRGLGEASKNNKILEASIKEFELISGQ 64
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
P++ K+R SVA FKIR G P+G TLR+ MY FL++LI++SLP +RDFRG+ +SFD
Sbjct: 65 HPLINKARKSVAGFKIREGMPVGISVTLRKKLMYTFLEKLIHLSLPRIRDFRGVSVKSFD 124
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
GRGN+N+G+KEQ++FPEI++D VD +RG+DI+ITTTA + E ALL A PF +
Sbjct: 125 GRGNYNLGIKEQLIFPEIEYDQVDQVRGLDISITTTAKTQQEGIALLRALGMPFND 180
>gi|71102|pir||R5KT5 ribosomal protein L5 - Cyanophora paradoxa
cyanelle >gi|11288|emb|CAA34548| (X16548) ribosomal
protein L5 (AA 1-181) [Cyanophora paradoxa]
Length = 181
Score = 202 bits (509), Expect = 2e-51
Identities = 94/175 (53%), Positives = 133/175 (75%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ +Y++EV+ L+ RF Y N VP+L KIT+N G+GEAA N K+LE +V ++ +I+G
Sbjct: 4 RLKTVYEQEVIKQLMTRFQYKNIHEVPKLKKITVNRGLGEAAQNAKILEASVKEITEITG 63
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+ IVT+++ ++A FK+R PIG TLR MY FLDRLIN+SLP +RDFRGI +SF
Sbjct: 64 QKAIVTRAKKAIAGFKLRQDMPIGVMVTLRGDYMYAFLDRLINLSLPRIRDFRGITAKSF 123
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
DGRGN+N+G+KEQ++FPE+D+D+++ IRGMDI+I TTA ++ E ALL + PF
Sbjct: 124 DGRGNYNLGLKEQLIFPEVDYDSIEQIRGMDISIVTTAKTNQEGLALLKSLGMPF 178
>gi|417671|sp|P33098|RL5_MICLU 50S RIBOSOMAL PROTEIN L5
>gi|322075|pir||S29884 Ribosomal protein L5 -
Micrococcus luteus >gi|44428|emb|CAA35560| (X17524) L5
protein [Micrococcus luteus]
Length = 191
Score = 200 bits (504), Expect = 6e-51
Identities = 92/176 (52%), Positives = 127/176 (71%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ Y++E+ L ++F Y N M VP LVK+ +NMGVGEAA + K++++AV D+ I+G
Sbjct: 13 RLKTKYREEIRGRLQEQFQYGNVMQVPGLVKVVVNMGVGEAAKDSKIIDDAVTDLTAITG 72
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+P++TK+R S+A FK+R G PIG TLR +M+EFLDRL+ + LP +RDFRG+ R F
Sbjct: 73 QKPMITKARKSIAQFKLREGMPIGTHATLRGDRMWEFLDRLVTLPLPRIRDFRGLSDRQF 132
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
DG GN+ G+ EQ VF EID D +D +RGMDI + TTA +D E +ALL A FPF+
Sbjct: 133 DGNGNYTFGLSEQTVFHEIDQDKIDRVRGMDITVVTTAKNDDEGRALLKALGFPFK 188
>gi|1710476|sp|P51302|RK5_PORPU CHLOROPLAST 50S RIBOSOMAL PROTEIN L5
>gi|2147066|pir||S73223 50S ribosomal protein L5 -
Porphyra purpurea chloroplast >gi|1276768 (U38804) 50S
ribosomal protein L5 [Porphyra purpurea]
Length = 181
Score = 199 bits (502), Expect = 1e-50
Identities = 93/175 (53%), Positives = 128/175 (73%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L+ YK V AL + F Y N VPR KIT+N G+GEA+ N K LE+++ ++ I+GQ
Sbjct: 5 LKEKYKTTVTQALKEEFQYENIHEVPRFTKITINRGLGEASQNAKALESSIQELTLITGQ 64
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+PIVT+++ S+A FKIR PIG LR+ KMY FL++LIN++LP +RDFRGI P+SFD
Sbjct: 65 KPIVTRAKKSIAGFKIREEVPIGIVVHLRKDKMYSFLEKLINLTLPRIRDFRGISPKSFD 124
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
G+GN+N+G++EQ++FPEID+D +D IRG+DI+I TTA +D E ALL PFR
Sbjct: 125 GKGNYNLGLREQLIFPEIDYDNIDQIRGLDISIVTTAKTDQEGLALLKKLGMPFR 179
>gi|6094089|sp|O83231|RL5_TREPA 50S RIBOSOMAL PROTEIN L5 >gi|3322465
(AE001202) ribosomal protein L5 (rplE) [Treponema
pallidum]
Length = 185
Score = 199 bits (500), Expect = 2e-50
Identities = 90/175 (51%), Positives = 131/175 (74%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L+ Y +++VP +++ FGYS M VP+L+KI L+MG+GEA N+K+L+ +VAD+ ISGQ
Sbjct: 10 LKVRYVQQIVPDMMRDFGYSTVMQVPKLLKIVLSMGLGEALANRKLLDASVADLGVISGQ 69
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+ T++R S+A+FK+R G IG TLRRS+MYEFL RLIN++LP V+DFRG+ P FD
Sbjct: 70 HAVKTRARKSIANFKLREGNEIGVMVTLRRSRMYEFLHRLINVALPRVKDFRGVSPXGFD 129
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
G GN++MG+ EQ++FPEIDFD ++ I G+++ + T+A +D EA+ LL PFR
Sbjct: 130 GHGNYSMGITEQIIFPEIDFDKIERISGLNVNVVTSAQTDQEARTLLTKLGMPFR 184
>gi|3024534|sp|P56362|RK5_CHLVU CHLOROPLAST 50S RIBOSOMAL PROTEIN L5
>gi|2224519|dbj|BAA58003| (AB001684) 50S ribosomal
protein L5 [Chlorella vulgaris]
Length = 180
Score = 198 bits (498), Expect = 3e-50
Identities = 90/177 (50%), Positives = 132/177 (73%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL++ Y+++ +P LIK F Y N VP+L KI +N G+G+A+ N KVLE+ + + I+
Sbjct: 4 RLDSFYQEQSIPQLIKEFHYKNKHQVPKLDKIVINRGLGDASQNAKVLESCSKEQSIITR 63
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+ +VT+S+ ++ASFK+R P+G TLR KMY FLDRLIN++LP +RDF+G+ +SF
Sbjct: 64 QQGVVTRSKKAIASFKLREKMPVGLVVTLRGDKMYAFLDRLINLALPRIRDFQGVSRKSF 123
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
DGRGN+++G++EQ++FPEID+D +D IRGMD++I TTA +D EA AL F PF+N
Sbjct: 124 DGRGNYSLGLEEQLMFPEIDYDKIDQIRGMDVSIVTTAKTDKEAMALFKTFGMPFKN 180
>gi|3122750|sp|O32995|RL5_MYCLE 50S RIBOSOMAL PROTEIN L5
>gi|2344846|emb|CAB11448| (Z98756) ribosomal protein L5
[Mycobacterium leprae]
Length = 187
Score = 197 bits (496), Expect = 5e-50
Identities = 92/176 (52%), Positives = 128/176 (72%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ Y+ E+ AL K+F Y N M +P +VK+ +NMGVG+AA + K++ AV+D+A I+G
Sbjct: 10 RLKQRYRSEIREALNKQFSYGNVMQIPTVVKVVVNMGVGDAARDAKLINGAVSDLALITG 69
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+P V K+R S+A FK+R G PIG + TLR +M+EFLDRL +I+LP +RDFRG+ P+ F
Sbjct: 70 QKPEVRKARKSIAQFKLREGMPIGVRVTLRDDRMWEFLDRLTSIALPRIRDFRGLSPKQF 129
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
DG GN+ G+ EQ VF EID D +D +RGMDI + T+A +D E +ALL A FPF+
Sbjct: 130 DGVGNYTFGLAEQSVFHEIDVDKIDRVRGMDINVVTSATTDDEGRALLRALGFPFK 185
>gi|3219844|sp|P95064|RL5_MYCTU 50S RIBOSOMAL PROTEIN L5
>gi|1806184|emb|CAB06440| (Z84395) rplE [Mycobacterium
tuberculosis]
Length = 187
Score = 196 bits (493), Expect = 1e-49
Identities = 90/176 (51%), Positives = 127/176 (72%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ Y+ E+ AL K+FGY N M +P + K+ +NMGVGEAA + K++ AV D+A I+G
Sbjct: 10 RLKERYRSEIRDALRKQFGYGNVMQIPTVTKVVVNMGVGEAARDAKLINGAVNDLALITG 69
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+P V ++R S+A FK+R G P+G + TLR +M+EFLDRL +I+LP +RDFRG+ P+ F
Sbjct: 70 QKPEVRRARKSIAQFKLREGMPVGVRVTLRGDRMWEFLDRLTSIALPRIRDFRGLSPKQF 129
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
DG GN+ G+ EQ VF E+D D +D +RGMDI + T+A +D E +ALL A FPF+
Sbjct: 130 DGVGNYTFGLAEQAVFHEVDVDKIDRVRGMDINVVTSAATDDEGRALLRALGFPFK 185
>gi|132998|sp|P10136|RL5_MYCCA 50S RIBOSOMAL PROTEIN L5
>gi|71101|pir||R5YM5C ribosomal protein L5 - Mycoplasma
capricolum (SGC3) >gi|44221|emb|CAA29716| (X06414)
ribosomal protein L5 (AA 1-180) [Mycoplasma capricolum]
Length = 180
Score = 194 bits (489), Expect = 3e-49
Identities = 93/176 (52%), Positives = 126/176 (70%)
Frame = +1
Query: 4 TRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKIS 183
+RLE YK ++V L K Y + M VP++ KI +NMG+G+A T+ K L+ A+ ++ K+S
Sbjct: 3 SRLEIKYKDQIVLELFKELNYKSIMQVPKIQKIVINMGIGDATTDPKKLDAAIFELEKLS 62
Query: 184 GQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRS 363
GQ+PIVTK++ S+A FK+R G IG K TLR KMY+FLD+LIN++LP VRDFRG+ S
Sbjct: 63 GQKPIVTKAKKSLAVFKLREGMAIGAKVTLRGKKMYDFLDKLINVALPRVRDFRGVSKTS 122
Query: 364 FDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
FDG GNF G+KEQ++FPE+D D V +RGMDI I T+A ++ EA ALL PF
Sbjct: 123 FDGFGNFYTGIKEQIIFPEVDHDKVIRLRGMDITIVTSAKTNKEAFALLQKIGMPF 178
>gi|2191128 (AF007269) belongs to the L5P family of ribosomal
proteins [Arabidopsis thaliana]
Length = 262
Score = 192 bits (482), Expect = 2e-48
Identities = 94/176 (53%), Positives = 124/176 (70%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ Y + ++PAL + F Y N VP++ KI +N G+G+AA N K LE A+ D+A I+G
Sbjct: 58 RLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITG 117
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+PI T++R S+A+FKIR P+G TLR MY FLDRLIN++LP RDF+G+ P SF
Sbjct: 118 QKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSF 177
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
DG GN+++GVK+Q VFPEI FDAV RGMD+ I+TTA SD E + LL PFR
Sbjct: 178 DGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMPFR 233
>gi|1350758|sp|P47409|RL5_MYCGE 50S RIBOSOMAL PROTEIN L5
>gi|1361818|pir||A64218 ribosomal protein L5 -
Mycoplasma genitalium (SGC3) >gi|3844757 (U39696)
ribosomal protein L5 (rpL5) [Mycoplasma genitalium]
Length = 180
Score = 191 bits (480), Expect = 4e-48
Identities = 90/177 (50%), Positives = 129/177 (72%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M LE YK E+V L ++ G+S+ M VP+L KI +NMGVG+A + K LE+A+ ++ I
Sbjct: 1 MNNLEKTYKTELVNQLQQQLGFSSIMQVPKLTKIVVNMGVGDAIRDNKFLESALNELHLI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
+GQ+P+ TK++ +++++K+R G IGCK TLR KM+ FL++LI I+LP VRDFRG+ R
Sbjct: 61 TGQKPVATKAKNAISTYKLRAGQLIGCKVTLRNKKMWSFLEKLIYIALPRVRDFRGLSLR 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
SFDG+GN+ +G+KEQ++FPEI +D + IRG DI I T+ N D+EA ALL A PF
Sbjct: 121 SFDGKGNYTIGIKEQIIFPEIVYDDIKRIRGFDITIVTSTNKDSEALALLRALKMPF 177
>gi|3914767|sp|O51443|RL5_BORBU 50S RIBOSOMAL PROTEIN L5 >gi|2688401
(AE001152) ribosomal protein L5 (rplE) [Borrelia
burgdorferi]
Length = 182
Score = 187 bits (470), Expect = 6e-47
Identities = 88/176 (50%), Positives = 129/176 (73%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L+ YK V+ L+K F Y + M VP+L KI +++GVGEA NKK+L++AV ++A+I+GQ
Sbjct: 7 LKKYYKDSVIKELVKEFEYKSIMQVPKLEKIVISVGVGEAVRNKKLLDSAVLELAQITGQ 66
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+ + TK++ ++A FKIR G IG K TLR + MYEFL +LI+++LP V+DFRGI +FD
Sbjct: 67 KAVKTKAKKAIAGFKIRQGQEIGAKVTLRGNAMYEFLYKLIHLALPRVKDFRGINGDAFD 126
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
G GN++ G+ EQ++F EID+D ++ I G++I I TTA++D E+KALL F PF N
Sbjct: 127 GNGNYSFGITEQIIFSEIDYDKIERISGLNITIVTTASNDKESKALLLKFGMPFSN 182
>gi|5880700|gb|AAD54793.1|AF137379_16 (AF137379) ribosomal protein
L5 [Nephroselmis olivacea]
Length = 184
Score = 185 bits (465), Expect = 2e-46
Identities = 84/176 (47%), Positives = 128/176 (72%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ Y VVP L ++F + N VP + KI +N G+G+A+ N K+L+ ++ ++ I+G
Sbjct: 4 RLKTFYLNSVVPKLRQQFHHRNIHEVPSIKKIVINRGLGDASQNAKLLDGSLQELTTIAG 63
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
QR ++T+S+ ++A+FKIR P+G TLR +MY FLDRLIN++LP +RDF+G+ +SF
Sbjct: 64 QRGVITRSKQAIAAFKIRQDMPVGISVTLRGERMYAFLDRLINLALPRIRDFQGMSTKSF 123
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
DG+GN+++G+ EQ++FPEI++DA+D +RGMDI+I T+A D E ALL A PFR
Sbjct: 124 DGQGNYSLGLNEQLMFPEINYDAIDQMRGMDISIITSATEDREGFALLQALGMPFR 179
>gi|2500237|sp|Q50306|RL5_MYCPN 50S RIBOSOMAL PROTEIN L5
>gi|2127651|pir||S62829 ribosomal protein L5 -
Mycoplasma pneumoniae (SGC3) >gi|2146616|pir||S73980
ribosomal protein L5 - Mycoplasma pneumoniae (SGC3)
(ATCC 29342) >gi|1215711 (U34795) RplE [Mycoplasma
pneumoniae] >gi|1674359 (AE000061) Mycoplasma
pneumoniae, ribosomal protein L5; similar to GenBank
Accession Number H64093, from H. influenzae [Mycoplasma
pneumoniae]
Length = 180
Score = 185 bits (465), Expect = 2e-46
Identities = 86/176 (48%), Positives = 127/176 (71%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M L+ Y+K + L K F +S+ M VPRL KI +NMGVG+A + K LE+A+ ++ I
Sbjct: 1 MNNLKAHYQKTIAKELQKSFAFSSIMQVPRLEKIVINMGVGDAIRDSKFLESALNELHLI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
SGQ+P+ TK++ +++++K+R G IGCK TLR +M+ FL++LI ++LP VRDFRG+ +
Sbjct: 61 SGQKPVATKAKNAISTYKLRAGQLIGCKVTLRGERMWAFLEKLIYVALPRVRDFRGLSLK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFP 528
SFDGRGN+ +G+KEQ++FPEI +D + IRG D+ + T+ N D+EA ALL A N P
Sbjct: 121 SFDGRGNYTIGIKEQIIFPEIVYDDIKRIRGFDVTLVTSTNKDSEALALLRALNLP 176
>gi|3914769|sp|O52344|RL5_MYCGA 50S RIBOSOMAL PROTEIN L5 >gi|2766515
(AF036708) ribosomal protein L5 [Mycoplasma
gallisepticum]
Length = 185
Score = 182 bits (456), Expect = 3e-45
Identities = 87/173 (50%), Positives = 122/173 (70%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQ 189
L+ YK ++VP L K FG+S+ M VP++ KI +NMGVG+A + K+LE A A++ ISGQ
Sbjct: 3 LKTKYKTKIVPLLQKEFGFSSVMQVPKIEKIVINMGVGDATKDAKLLELAQAELQAISGQ 62
Query: 190 RPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFD 369
+P++TK+ S ASFKIR G IGCK TLR KM+ FL++LINI+LP VRDFRG+ R+FD
Sbjct: 63 KPVITKAHSSNASFKIRQGQAIGCKVTLRGEKMWNFLEKLINIALPRVRDFRGLSNRAFD 122
Query: 370 GRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFP 528
RGN+ +G+KEQ++FPEI +D V IRG D+ + ++++ LL P
Sbjct: 123 ARGNYTLGIKEQIIFPEIIYDNVKKIRGFDVTLVISSDNAKYNHRLLLELGMP 175
>gi|6466337|gb|AAF12919.1|AF022186_41 (AF022186) unknown; 50S
ribosomal protein L5 [Cyanidium caldarium]
Length = 182
Score = 178 bits (446), Expect = 4e-44
Identities = 85/176 (48%), Positives = 122/176 (69%), Gaps = 1/176 (0%)
Frame = +1
Query: 10 LENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEA-ATNKKVLENAVADMAKISG 186
L+++Y ++ L K+F Y+N +P+L KITLN G+G + KV E++V+D+ I+G
Sbjct: 6 LQHLYFNKIRVELQKQFEYTNVHQIPKLTKITLNRGLGTLYQQSPKVFESSVSDLMLITG 65
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q+P KS+ S+A FK+R G +G TLRR KMY FL++LI+ SLP RDFRG+ ++F
Sbjct: 66 QKPRFNKSKKSIAGFKLREGTVVGLSVTLRRKKMYAFLEKLIHFSLPAARDFRGLSTKNF 125
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
DG GN+N+G+KE +FPEIDFD +D G++I I TTAN+D E KALL PF++
Sbjct: 126 DGLGNYNLGIKEHAIFPEIDFDKIDHSYGLNICIVTTANNDIEGKALLKFLGMPFKD 182
>gi|132994|sp|P21510|RK5_EUGGR CHLOROPLAST 50S RIBOSOMAL PROTEIN L5
>gi|279646|pir||R5EG5 ribosomal protein L5 - Euglena
gracilis chloroplast >gi|14374|emb|CAA77924| (Z11874)
ribosomal protein L5 [Euglena gracilis]
>gi|415763|emb|CAA50107| (X70810) 50S ribosomal protein
L5 [Euglena gracilis]
Length = 179
Score = 175 bits (439), Expect = 2e-43
Identities = 83/179 (46%), Positives = 122/179 (67%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M RL++ Y + ++P L + FGY N VP+L KI +N G E+ N K+LE + ++ I
Sbjct: 1 MQRLKSFYLETIIPKLKEEFGYVNSYRVPKLKKIVINRGFDESCQNSKILEVLLNELEII 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
SGQ+PI++K++ ++A+FK++ P+G TLR KMY FLDRLIN+SLP +RDF+GI
Sbjct: 61 SGQKPIISKAKKAIANFKLKEKMPVGMFLTLRSEKMYSFLDRLINLSLPRIRDFQGINKN 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
FDG GNF+ G+ EQ +FPEI+FD + ++G++I I TTA ++ EA LL PFR+
Sbjct: 121 CFDGSGNFSFGLSEQSMFPEINFDKMIKVQGLNITIVTTAETNQEAFFLLKELGIPFRD 179
>gi|3777600 (AF095708) 50S ribosomal protein L5 [Oryza sativa]
Length = 280
Score = 172 bits (432), Expect = 2e-42
Identities = 87/175 (49%), Positives = 116/175 (65%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ +Y ++VVP + + FGY+N VP++ KI +N G+G A N K LE+A+ D+A I+G
Sbjct: 78 RLKAVYDQKVVPLITEEFGYTNVHQVPKVEKIVVNCGLGAEAGNSKGLESAMKDLAMITG 137
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSF 366
Q P+ TK++ SVASFKIR G IG TLR M+ FLDRLIN+ LP DF G+ P SF
Sbjct: 138 QWPVKTKAKKSVASFKIREGNTIGIAVTLRGRVMFNFLDRLINLGLPRTMDFLGVNPNSF 197
Query: 367 DGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
DG GNF +G+++Q VFPEI ++ GMD+ I TTA +D EA LL PF
Sbjct: 198 DGHGNFTIGLRDQGVFPEIPYEVGGKKNGMDVCIVTTAKTDNEALRLLTLLGMPF 252
>gi|132986|sp|P14757|RK5_ASTLO CHLOROPLAST 50S RIBOSOMAL PROTEIN L5
>gi|71103|pir||R5IT5 ribosomal protein L5 - euglenid
(Astasia longa) plastid >gi|11196|emb|CAA32554| (X14384)
ribosomal protein L5 (AA 1 - 179) [Astasia longa]
>gi|16008|emb|CAA34138| (X16004) ribosomal protein L5
[Astasia longa] >gi|414856|emb|CAA53309| (X75651) 50s
ribosomal protein L5 [Astasia longa]
Length = 179
Score = 171 bits (429), Expect = 4e-42
Identities = 77/177 (43%), Positives = 122/177 (68%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M +L+++Y +V P L+ F Y+N +P++ K+ ++ G GE+ + K+LE+ + ++ I
Sbjct: 1 MQKLKSIYITKVCPILVNEFLYTNFFEIPKINKVVISRGFGESCNSSKILESLLVELKNI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
SGQ+PI+ KS+ S+++FK++ G PIG TL KMY FLDRLIN+S P +RDF G+ +
Sbjct: 61 SGQKPILCKSKNSISNFKVKKGMPIGMFVTLHGDKMYSFLDRLINLSFPRMRDFNGLNIK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
FDG GN+N+G+ EQ +FPEI++ ++ +GM+I I TTA +D E+ +LL FPF
Sbjct: 121 GFDGFGNYNVGLSEQSIFPEIEYSSILKNKGMNITIVTTAKTDLESFSLLKGLGFPF 177
>gi|4155819 (AE001547) 50S RIBOSOMAL PROTEIN L5 [Helicobacter pylori
J99]
Length = 181
Score = 162 bits (405), Expect = 2e-39
Identities = 75/177 (42%), Positives = 114/177 (64%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M L+ Y+ EV L + NPM +P+L KI +++G G A + K+++N ++ +
Sbjct: 1 MFGLKQFYQNEVRAKLAQELDIKNPMLLPKLEKIVISVGAGAHAKDMKIMQNIAQTISLV 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
+GQ+ ++TK++ SVA FKIR G +G K TLR +MY FL++LI ISLP V+DFRGI
Sbjct: 61 AGQKAVITKAKKSVAGFKIREGMAVGAKVTLRNKRMYNFLEKLIVISLPRVKDFRGISRN 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
FDGRGN+ G+ EQ++FPE+ +D + GM+I + T+ ++D EA LL+ PF
Sbjct: 121 GFDGRGNYTFGINEQLIFPEVVYDDIMVSHGMNITMVTSTDNDKEAFKLLELLGLPF 177
>gi|4376933|gb|AAD18774| (AE001647) L5 Ribosomal Protein [Chlamydia
pneumoniae]
Length = 180
Score = 160 bits (401), Expect = 7e-39
Identities = 78/178 (43%), Positives = 118/178 (65%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M+RL+ Y +E+ +L ++FGY+N M +P L KI L+MG+ EAA +K + + + ++ I
Sbjct: 1 MSRLKKFYTEEIRKSLFEKFGYANKMQIPVLKKIVLSMGLAEAAKDKNLFQAHLEELTMI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
SGQ+P+VTK+R S+A FK+R G IG K TLR +MY+F+DR NI P +RDFRG +
Sbjct: 61 SGQKPLVTKARNSIAGFKLREGQGIGAKVTLRGIRMYDFMDRFCNIVSPRIRDFRGFSNK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
DGRG +++G+ +Q +FPEI+ D V +G++I TTA +D E LL+ F+
Sbjct: 121 G-DGRGCYSVGLDDQQIFPEINLDRVKRTQGLNITWVTTAQTDDECTTLLELMGLRFK 177
>gi|2500236|sp|P56033|RL5_HELPY 50S RIBOSOMAL PROTEIN L5
>gi|2314470|gb|AAD08347.1| (AE000633) ribosomal protein
L5 (rpl5) [Helicobacter pylori 26695]
Length = 181
Score = 159 bits (398), Expect = 2e-38
Identities = 75/177 (42%), Positives = 113/177 (63%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M L+ Y+ EV L + NPM +P+L KI +++G G A + K+++N ++ I
Sbjct: 1 MFGLKQFYQSEVRTKLAQELDIKNPMLLPKLEKIVISVGAGAHAKDMKIMQNIAQTISLI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
+GQ+ ++TK++ SVA FKIR G +G K TLR +MY FL++LI ISLP V+DFRGI
Sbjct: 61 AGQKAVITKAKKSVAGFKIREGMAVGAKVTLRNKRMYNFLEKLIVISLPRVKDFRGISRN 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
FDG GN+ G+ EQ++FPE+ +D + GM+I + T+ ++D EA LL+ PF
Sbjct: 121 GFDGCGNYTFGINEQLIFPEVVYDDIMVSHGMNITMVTSTDNDKEAFKLLELLGLPF 177
>gi|3328953|gb|AAC68117.1| (AE001323) L5 Ribosomal Protein
[Chlamydia trachomatis]
Length = 180
Score = 155 bits (389), Expect = 2e-37
Identities = 77/178 (43%), Positives = 115/178 (64%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M+RL+ +Y +E+ L +F Y N M +P L KI ++MG+ EAA +K + + + ++A I
Sbjct: 1 MSRLKKLYTEEIRKTLQDKFQYENVMQIPVLKKIVISMGLAEAAKDKNLFQAHLEELAVI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
S Q+P+VT++R S+A FK+R G IG K TLR +MY+F+DR NI P +RDFRG +
Sbjct: 61 SSQKPLVTRARNSIAGFKLREGQGIGAKVTLRGIRMYDFMDRFCNIVSPRIRDFRGFSCK 120
Query: 361 SFDGRGNFNMGVKEQVVFPEIDFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
DGRG ++ G+ +Q +FPE+D D V +GM+I TTA +DAE LL+ F+
Sbjct: 121 G-DGRGCYSFGLDDQQIFPEVDLDRVKRSQGMNITWVTTAQTDAECLTLLECMGLRFK 177
>gi|3914786|sp|O21252|RM05_RECAM MITOCHONDRIAL 60S RIBOSOMAL PROTEIN
L5 >gi|2258345|gb|AAD11879.1| (AF007261) ribosomal
protein L5 [Reclinomonas americana]
Length = 182
Score = 151 bits (378), Expect = 4e-36
Identities = 77/176 (43%), Positives = 118/176 (66%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKI 180
M RL+ Y++ + +I++F Y NP VP++ KI +NMGV EAA++KK + + + I
Sbjct: 1 MNRLKKHYEEIIRLDMIRKFNYVNPHMVPKIDKIIVNMGVKEAASDKKQILAPLLILELI 60
Query: 181 SGQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPR 360
+GQ+ IVTK++ S+++FKIR G+PIG TLR + MYEFL +LI + LP +RDF+G+P
Sbjct: 61 TGQKAIVTKAKKSISNFKIRKGFPIGVSVTLRGNNMYEFLSKLITLVLPKIRDFKGVPFT 120
Query: 361 SFDGRGNFNMGVKEQVVFPEI--DFDAVDAIRGMDIAITTTANSDAEAKALLDAFNFP 528
S + G+ +G+K+ +VFPEI ++D + + G +I I TTA + EA LL F P
Sbjct: 121 SINKYGHLAIGIKDLLVFPEIESEYDKFNRVYGANIVIVTTAKTKKEAGVLLSGFQIP 178
>gi|132990|sp|P28531|RL5_CHLTR 50S RIBOSOMAL PROTEIN L5
>gi|282139|pir||F42645 ribosomal protein L5 - Chlamydia
trachomatis >gi|144623 (M80325) ribosomal protein CtrL5e
[Chlamydia trachomatis]
Length = 155
Score = 141 bits (353), Expect = 3e-33
Identities = 69/153 (45%), Positives = 103/153 (67%)
Frame = +1
Query: 76 MAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGWPI 255
M +P L KI ++MG+ EAA +K + + + ++A ISGQ+P+VT+++ S+A FK+R G I
Sbjct: 1 MQIPVLKKIVISMGLAEAAKDKNLFQAHLEELAVISGQKPLVTRAKNSIAGFKLREGQGI 60
Query: 256 GCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDFDA 435
G K TLR +MY+F+DR NI P +RDFRG + DGRG +++G+ +Q +FPE+D DA
Sbjct: 61 GAKVTLRGIRMYDFMDRFCNIVSPRIRDFRGFSCKG-DGRGCYSLGLDDQQIFPEVDLDA 119
Query: 436 VDAIRGMDIAITTTANSDAEAKALLDAFNFPFR 534
V +GM+I TTA +DAE LL+ F+
Sbjct: 120 VKRSQGMNITWVTTAQTDAECLTLLECMGLRFK 152
>gi|1350653|sp|P49547|RK5_ODOSI CHLOROPLAST 50S RIBOSOMAL PROTEIN L5
>gi|1185153|emb|CAA91636| (Z67753) 50S ribosomal protein
L5 [Odontella sinensis]
Length = 238
Score = 138 bits (344), Expect = 3e-32
Identities = 62/150 (41%), Positives = 97/150 (64%)
Frame = +1
Query: 64 YSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRN 243
+ NP +P+L KI +N G+G AA N +L+ ++ + I+GQ+PI+T+++ ++A FKIR
Sbjct: 40 FGNPHTIPKLQKIQINRGLGLAAQNTNILKKSINEFTAITGQKPIITRAKKAIAGFKIRE 99
Query: 244 GWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEI 423
+G TLR SKMY FL +LI + +RDFRG+ RSFD GN+ +G+KEQ++FPEI
Sbjct: 100 NMELGLTVTLRGSKMYSFLTKLIFFTFAQIRDFRGLSVRSFDKAGNYTLGLKEQLIFPEI 159
Query: 424 DFDAVDAIRGMDIAITTTANSDAEAKALLD 513
D+D VD +G I + ++ + +D
Sbjct: 160 DYDDVDQTQGFSITLVFSSTAPKSRSKTMD 189
>gi|4927752|gb|AAD33268.1|AF126059_9 (AF126059) RpL5 [Streptococcus
pneumoniae] >gi|4927761|gb|AAD33277.1| (AF126060) RpL5
[Streptococcus pneumoniae] >gi|4927770|gb|AAD33286.1|
(AF126061) RpL5 [Streptococcus pneumoniae]
Length = 100
Score = 112 bits (278), Expect = 2e-24
Identities = 54/97 (55%), Positives = 72/97 (73%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RL+ Y EVVPAL ++F YS+ MAVP++ KI LNMGVGEA +N K LE A ++A ISG
Sbjct: 4 RLKEKYLNEVVPALTEQFNYSSVMAVPKVDKIVLNMGVGEAVSNAKSLEKAAEELALISG 63
Query: 187 QRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEF 297
Q+P++TK++ S+A F++R G IG K TLR +MYEF
Sbjct: 64 QKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEF 100
>gi|6066166|gb|AAF03184.1|AF110138_16 (AF110138) ribosomal protein
L5 [Nephroselmis olivacea]
Length = 186
Score = 97.5 bits (239), Expect = 7e-20
Identities = 59/164 (35%), Positives = 88/164 (52%), Gaps = 2/164 (1%)
Frame = +1
Query: 46 LIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVA 225
LI + Y N +P+ + LN G +KK L + M IS Q+ +++I+VA
Sbjct: 21 LILKKNYQNVNQLPKFKAVILNTGTKVILEDKKRLIPHLLAMEFISAQKTKQIQAKIAVA 80
Query: 226 SFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQ 405
SF ++ G IG KTTLR KM+EFL + L + F GI + D GN +G+
Sbjct: 81 SFYLQKGNWIGWKTTLRNYKMFEFLTIFVTKVLSSIEFFSGISESNIDSSGNIQIGIDNP 140
Query: 406 VVFPEID--FDAVDAIRGMDIAITTTANSDAEAKALLDAFNFPFRN 537
+VF E+D F+A + ++GM+I I TTA + E+K L+ P N
Sbjct: 141 LVFNELDFHFEAFEHVQGMNITIQTTAKTREESKLLISGIQIPTIN 186
>gi|6094088|sp|O59431|RL5_PYRHO 50S RIBOSOMAL PROTEIN L5P
>gi|3258197|dbj|BAA30880.1| (AP000007) 188aa long
hypothetical 50S ribosomal protein L5 [Pyrococcus
horikoshii]
Length = 188
Score = 86.2 bits (210), Expect = 2e-16
Identities = 49/135 (36%), Positives = 76/135 (56%)
Frame = +1
Query: 67 SNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNG 246
++PM PR+ K+T+N+GVGE+ L A + +++GQ+PI K++ + F IR G
Sbjct: 17 AHPMRRPRIQKVTINIGVGESGER---LTKAEIMLQRLTGQKPIRRKAKKTNRDFGIRRG 73
Query: 247 WPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID 426
PI K TLR K YE L RL+ D++ + SFD GN G++E + P ++
Sbjct: 74 EPIAVKVTLRGPKAYEMLKRLL-----AAVDYK-LKASSFDEHGNVCFGIEEHINIPGVE 127
Query: 427 FDAVDAIRGMDIAIT 471
+D I GMD+ +T
Sbjct: 128 YDPEIGIFGMDVCVT 142
>gi|730567|sp|P41202|RL5_SULAC 50S RIBOSOMAL PROTEIN L5P
>gi|243187|bbs|77839 (S77838) ribosomal protein L5
[Sulfolobus acidocaldarius, Peptide, 178 aa] [Sulfolobus
acidocaldarius] >gi|2052259|emb|CAA69090.1| (Y07778)
ribosomal protein L5 [Sulfolobus acidocaldarius]
Length = 178
Score = 85.8 bits (209), Expect = 2e-16
Identities = 52/127 (40%), Positives = 74/127 (57%)
Frame = +1
Query: 91 LVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGWPIGCKTT 270
L K+T+N+GVGE+ L+ A + +++G +P+ TK R S+ F +R G PIG K T
Sbjct: 17 LDKVTVNIGVGESGER---LQKAYQLVQELTGVKPVYTKGRKSIREFGVRKGAPIGVKAT 73
Query: 271 LRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDFDAVDAIR 450
LRR EFL ++ LP V +FR + SFD GN + G+ E V+ P +D I
Sbjct: 74 LRRQAAVEFLKKV----LPAV-NFR-LKQSSFDNYGNVSFGIAEHVLIPGTRYDPEIGIF 127
Query: 451 GMDIAIT 471
GMD+AIT
Sbjct: 128 GMDVAIT 134
>gi|6320443|ref|NP_010523.1|MRPL7| Mitochondrial ribosomal protein
MRPL7 (YmL7); Mrpl7p >gi|1710597|sp|P36519|RM07_YEAST
60S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL PRECURSOR (YML7)
>gi|1078496|pir||S54533 ribosomal protein YmL7,
mitochondrial - yeast (Saccharomyces cerevisiae)
>gi|817823|emb|CAA89723| (Z49701) unknown [Saccharomyces
cerevisiae]
Length = 292
Score = 85.4 bits (208), Expect = 3e-16
Identities = 52/150 (34%), Positives = 83/150 (54%), Gaps = 4/150 (2%)
Frame = +1
Query: 82 VPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGWPIGC 261
+P L + +N V EA N+ + A + +I+G +P S+ V ++K+R G +G
Sbjct: 134 IPGLESVVINCFVREARENQLLAITAALQLQQITGCKPHPIFSKNDVPTWKLRKGHQMGA 193
Query: 262 KTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVV--FPEIDF-- 429
K L+ +M +FL L I LP +R+++GI +S + G + G+ + + FPEID
Sbjct: 194 KVELKGKEMSQFLSTLTEIVLPRIREYKGISNQSGNRFGGISFGLTAEDIKFFPEIDANQ 253
Query: 430 DAVDAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
D+ GM I I T+A D +A+ LL F FPF
Sbjct: 254 DSWPKTFGMHININTSAQLDYQARTLLSGFQFPF 287
>gi|5457760|emb|CAB49250.1| (AJ248284) LSU ribosomal protein L5P
(rpl5P) [Pyrococcus abyssi]
Length = 188
Score = 84.7 bits (206), Expect = 5e-16
Identities = 50/135 (37%), Positives = 74/135 (54%)
Frame = +1
Query: 67 SNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNG 246
++PM PR+ K+T+N+GVGE+ L A + +++GQ+PI K++ + F IR G
Sbjct: 17 AHPMRKPRIEKVTINIGVGESGER---LTKAEIMLERLTGQKPIRRKAKKTNRDFGIRRG 73
Query: 247 WPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID 426
PI K TLR K YE L RL+ D R + SFD GN G+ E + P ++
Sbjct: 74 EPIAVKVTLRGPKAYEMLKRLL-----AAVDNR-LKASSFDEHGNVCFGIDEHINIPGVE 127
Query: 427 FDAVDAIRGMDIAIT 471
+D I GMD+ +T
Sbjct: 128 YDPEIGIFGMDVCVT 142
>gi|1710572|sp|P54040|RL5_METJA 50S RIBOSOMAL PROTEIN L5P
>gi|2119107|pir||E64358 ribosomal protein L5 -
Methanococcus jannaschii >gi|1591171 (U67497) LSU
ribosomal protein L5P (rplE) [Methanococcus jannaschii]
Length = 190
Score = 83.9 bits (204), Expect = 9e-16
Identities = 49/134 (36%), Positives = 73/134 (53%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM PR+ K+ +N GVGE+ L + +++GQ+PI T+++ + SF IR
Sbjct: 10 NPMLKPRIEKVVVNFGVGESGDR---LTKGAQVIEELTGQKPIRTRAKQTNPSFGIRKKL 66
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
PIG K TLR K EFL N ++ + + SFD GNF+ G+ E + FP +
Sbjct: 67 PIGLKVTLRGKKAEEFLK---NAFEAFQKEGKKLYDYSFDDYGNFSFGIHEHIDFPGQKY 123
Query: 430 DAVDAIRGMDIAIT 471
D + I GMD+ +T
Sbjct: 124 DPMIGIFGMDVCVT 137
>gi|132996|sp|P14124|RL5_HALMA 50S RIBOSOMAL PROTEIN L5P (HMAL5)
(HL13) >gi|71104|pir||R5HSL5 ribosomal protein L5 -
Haloarcula marismortui >gi|48861|emb|CAA41284| (X58395)
ribosomal protein [Haloarcula marismortui]
>gi|228184|prf||1718307A ribosomal protein L5
[Haloarcula marismortui]
Length = 177
Score = 81.1 bits (197), Expect = 6e-15
Identities = 46/136 (33%), Positives = 71/136 (51%)
Frame = +1
Query: 61 GYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIR 240
G + M PR+ K+ ++MG+G + L NA + +I+GQ P+ TK++ +V F IR
Sbjct: 9 GDFHEMREPRIEKVVVHMGIGHGGRD---LANAEDILGEITGQMPVRTKAKRTVGEFDIR 65
Query: 241 NGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPE 420
G PIG K TLR EFL + ++ + FD GNF+ GV+E FP
Sbjct: 66 EGDPIGAKVTLRDEMAEEFLQTALPLA--------ELATSQFDDTGNFSFGVEEHTEFPS 117
Query: 421 IDFDAVDAIRGMDIAI 468
++D I G+D+ +
Sbjct: 118 QEYDPSIGIYGLDVTV 133
>gi|6015772|emb|CAB57599.1| (Y18930) ribosomal protein L5 (HMAL5)
[Sulfolobus solfataricus]
Length = 182
Score = 80.0 bits (194), Expect = 1e-14
Identities = 48/134 (35%), Positives = 75/134 (55%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM +L K+T+N+G+GE+ L+ A + +++G +P+ T S+ ++ F IR G
Sbjct: 14 NPMRKVKLSKVTVNIGLGESGDR---LQKAYQLLQELTGAKPVYTISKKTIREFGIRKGQ 70
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
IG K TLR ++ EFL +++ +R + SFD GN + G+ E V+ P +
Sbjct: 71 EIGVKVTLRGAQAEEFLRKVLE-----AIGYR-LKKSSFDDYGNVSFGIAEHVILPGARY 124
Query: 430 DAVDAIRGMDIAIT 471
D I GMDIAIT
Sbjct: 125 DPEIGIFGMDIAIT 138
>gi|6685887|sp|Q9YF87|RL5_AERPE 50S RIBOSOMAL PROTEIN L5P
>gi|5103993|dbj|BAA79309.1| (AP000059) 194aa long
hypothetical 50S ribosomal protein L5 [Aeropyrum pernix]
Length = 194
Score = 78.8 bits (191), Expect = 3e-14
Identities = 42/134 (31%), Positives = 73/134 (54%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
+PM PR+VK+T+N+ +G++ L+ A + +++GQ+P+ K++ ++ +F +R G
Sbjct: 27 SPMRRPRIVKVTVNISIGQSGER---LQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGE 83
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
I TLR K FL R ++ I S D GN + G++E ++ P + +
Sbjct: 84 NIAVMVTLRGEKALNFLKRALDAV------GHRIKTSSIDEHGNVSFGIEEHILIPGVKY 137
Query: 430 DAVDAIRGMDIAIT 471
D I GMD+AIT
Sbjct: 138 DPRVGILGMDVAIT 151
>gi|3219845|sp|O14337|RM07_SCHPO PROBABLE 60S RIBOSOMAL PROTEIN L7,
MITOCHONDRIAL PRECURSOR >gi|2239233|emb|CAB10151.1|
(Z97211) probable mitochondrial 60s ribosomal protein
[Schizosaccharomyces pombe]
Length = 287
Score = 78.8 bits (191), Expect = 3e-14
Identities = 50/154 (32%), Positives = 85/154 (54%), Gaps = 7/154 (4%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NP +P + K+ ++ EA +K L + + I+G +P + +R V+ +K+R+G
Sbjct: 120 NPKNLPSISKVVVSTMHKEALVDKTQLLSTMMAFRSITGLQPEIVYARKDVSPWKLRSGV 179
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQV--VFPEI 423
P+G K TL MY FL L + LP + DF+G+ P S D GN + G+ +V +FP+I
Sbjct: 180 PVGVKVTLTGESMYTFLSILSELVLPQLHDFKGLSPTSGDQTGNISFGLPSEVMPLFPQI 239
Query: 424 DFDAV-----DAIRGMDIAITTTANSDAEAKALLDAFNFPF 531
+AV ++ G ++ ITT + A+ + + PF
Sbjct: 240 --EAVYEMYPHSLPGFNVNITTNSKDTRLARFFVSSL-IPF 277
>gi|132997|sp|P14029|RL5_METVA 50S RIBOSOMAL PROTEIN L5P
>gi|71105|pir||R5MX5 ribosomal protein L5 -
Methanococcus vannielii >gi|44761|emb|CAA34693| (X16720)
rpL5 (AA 1-181) [Methanococcus vannielii]
Length = 181
Score = 76.9 bits (186), Expect = 1e-13
Identities = 48/133 (36%), Positives = 68/133 (51%)
Frame = +1
Query: 73 PMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGWP 252
PM PR+ K+T+N GVGEA + + + +GQ P+ T ++ + +F IR P
Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIETL---TGQAPVRTLAKQTNPAFGIRKKLP 67
Query: 253 IGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDFD 432
IG K TLR EFL+ N + + + SFD GNF+ GV E + FP +D
Sbjct: 68 IGLKVTLRGKNAEEFLE---NAFVAFKVSGKVLYASSFDKVGNFSFGVPEHIDFPGQKYD 124
Query: 433 AVDAIRGMDIAIT 471
I GMDI +T
Sbjct: 125 PTVGIYGMDICVT 137
>gi|3122747|sp|O26124|RL5_METTH 50S RIBOSOMAL PROTEIN L5P
>gi|2621044 (AE000795) ribosomal protein L11 (E.coli L5)
[Methanobacterium thermoautotrophicum]
Length = 168
Score = 74.9 bits (181), Expect = 4e-13
Identities = 45/134 (33%), Positives = 72/134 (53%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM R+ K+TLN+GVGE E + +M SGQ+P+ T S+++ F IR
Sbjct: 2 NPMEEVRIFKVTLNIGVGEGGEKLARAERLLEEM---SGQKPVRTHSKVTNPEFGIRKKQ 58
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
PI CK TLR E ++++ + L + + + FD GN +MG+ E + P + +
Sbjct: 59 PIACKVTLRG----ERAEKVLKMFLEGIGN--RLKASQFDEYGNVSMGIDEHIDIPGMKY 112
Query: 430 DAVDAIRGMDIAIT 471
D I GM++++T
Sbjct: 113 DPEIGIFGMNLSVT 126
>gi|3914744|sp|O28367|RL5_ARCFU 50S RIBOSOMAL PROTEIN L5P
>gi|2648645 (AE000971) LSU ribosomal protein L5P (rpl5P)
[Archaeoglobus fulgidus]
Length = 178
Score = 72.2 bits (174), Expect = 3e-12
Identities = 42/140 (30%), Positives = 70/140 (50%)
Frame = +1
Query: 52 KRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASF 231
K+ G NPM L K+ +N+GVGE+ K + + ++ + Q+P +T +++++ +F
Sbjct: 8 KKAGNENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVE---QKPAITYAKMTIKNF 64
Query: 232 KIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVV 411
IR G IG K TLR K +FL + + R G G F G+ E +
Sbjct: 65 GIRKGEAIGIKVTLRGEKALKFLKDALTVK-------ENRLSRKSIGEGYFAFGIAEHID 117
Query: 412 FPEIDFDAVDAIRGMDIAIT 471
P +D+D I GMD+ ++
Sbjct: 118 LPGVDYDPDVGIFGMDVCVS 137
>gi|2500239|sp|Q56231|RL5_THEAC 50S RIBOSOMAL PROTEIN L5P
>gi|1373336 (U57643) ribosomal protein L5 [Thermoplasma
acidophilum]
Length = 170
Score = 67.1 bits (161), Expect = 1e-10
Identities = 44/133 (33%), Positives = 66/133 (49%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM + K+ +N+GVG+A L A + ++G + T ++ S+ F IR
Sbjct: 2 NPMEEVIIDKVVVNIGVGQAGDR---LTKAAKVLEMLTGHKATNTLAKKSIRDFNIRKRL 58
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
PIG K TLR+ EFL + V+D++ I SFD GN G+ + F + +
Sbjct: 59 PIGVKVTLRKKDAMEFLQKAF-----YVKDYK-ITDYSFDKHGNAYFGISDYTDFKGMKY 112
Query: 430 DAVDAIRGMDIAI 468
D I GMD+AI
Sbjct: 113 DPDIGIFGMDVAI 125
>gi|1710494|sp|Q10157|RL11_SCHPO 60S RIBOSOMAL PROTEIN L11
>gi|1177354|emb|CAA93230.1| (Z69240) 60s ribosomal
protein L11 [Schizosaccharomyces pombe]
>gi|3299810|dbj|BAA31552| (AB016005) ribosomal protein
L11 homolog [Schizosaccharomyces pombe]
>gi|5738531|emb|CAB52808.1| (AL109846) 60s ribosomal
protein L11 [Schizosaccharomyces pombe]
Length = 174
Score = 66.7 bits (160), Expect = 1e-10
Identities = 42/133 (31%), Positives = 68/133 (50%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM R+ K+ LN+ +GE+ L A + ++SGQ P+ +K+R ++ F IR
Sbjct: 7 NPMKELRISKLVLNISLGESGDR---LTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRNE 63
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
I C T+R K E L+R + V+++ + R+F GNF G++E + I +
Sbjct: 64 KIACHVTVRGPKAEEILERGLK-----VKEYE-LKKRNFSATGNFGFGIQEHIDL-GIKY 116
Query: 430 DAVDAIRGMDIAI 468
D I GMD +
Sbjct: 117 DPSIGIYGMDFYV 129
>gi|1173080|sp|P46749|RM05_PROWI MITOCHONDRIAL 60S RIBOSOMAL PROTEIN
L5 >gi|467861|gb|AAD12648.1| (U02970) ribosomal protein
L5 [Prototheca wickerhamii]
Length = 231
Score = 66.0 bits (158), Expect = 2e-10
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Frame = +1
Query: 4 TRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKIS 183
T L+ YK V L + Y N M L KI N A K+ + A + I+
Sbjct: 39 TTLQKYYKNIVCQDLCLKQDYKNIMECVSLNKIVCNTSSKHYAGEKESILPAFTALEMIT 98
Query: 184 GQRPIVTKSRISVASFKIRNGWPIGCKTTLRRSKMYEFLDRLINISLPCVRDF-----RG 348
GQ+P T ++ S+++FK+R +GCK +LR + MY FL++ I+I ++D+
Sbjct: 99 GQKPKYTCAKKSISTFKLRQNQILGCKNSLRGNTMYRFLEKYISIVSTRIKDWSENYSSS 158
Query: 349 IPPRSFDGRGNFNMGVKEQVVFPEID--FDAVDAIRGMDIAITTTANS 486
S N + V +FPE+ + + G++I+ +T +N+
Sbjct: 159 NKSNSLTTAYNKDYVVLNSNLFPELQQHDELFQNVTGIEISFSTLSNN 206
>gi|417681|sp|P26860|RM05_MARPO MITOCHONDRIAL 60S RIBOSOMAL PROTEIN
L5 >gi|282799|pir||S25979 ribosomal protein L5 -
liverwort (Marchantia polymorpha) mitochondrion
>gi|250832|bbs|107832 ribosomal protein L5 [Marchantia
polymorpha=liverwort, Peptide Mitochondrial, 188 aa]
>gi|786206 (M68929) rpl5 [Marchantia polymorpha]
Length = 188
Score = 63.6 bits (152), Expect = 1e-09
Identities = 56/171 (32%), Positives = 83/171 (47%), Gaps = 15/171 (8%)
Frame = +1
Query: 7 RLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISG 186
RLE Y + + P L+ + Y N M VPRL KI + V +A +N ++N M + G
Sbjct: 8 RLEFHYNQVIRPDLLLKINYENIMEVPRLCKIIV---VPKAPSN--FIKNVKLAMEIVCG 62
Query: 187 QRPIVTKSRISVASFKIRNGWPIG-------------CKTTLRRSKMYEFLDRLINISLP 327
Q+ I T+SR S N + + ++TLR MY FL++L+ I
Sbjct: 63 QKFIQTRSRGSTGKSFRFNKFVLNQESKRDTGYVTYLARSTLRGHIMYNFLEKLVTII-- 120
Query: 328 CVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID--FDAVDAIRGMDIAITTTANSDAEAK 501
F P + +M +FPEI F+ + IRG D+ I T+AN+ E
Sbjct: 121 ---SFYDYPVKIQKNSIQLSMATSLLRLFPEIQDHFEIFEHIRGFDVTIVTSANTQDETV 177
Query: 502 ALLDAF 519
L F
Sbjct: 178 ILWSGF 183
>gi|6325359|ref|NP_015427.1|RPL11A| Ribosomal protein L11A (L16A)
(rp39A) (YL22); Rpl11ap >gi|132951|sp|P06380|RL11_YEAST
60S RIBOSOMAL PROTEIN L11 (L16) (YL16) (39A) (RP39)
>gi|2119108|pir||S59767 ribosomal protein L11.e.A,
cytosolic - yeast (Saccharomyces cerevisiae) >gi|914973
(U32445) 60S ribosomal protein L16 (Swiss Prot.
accession number P06380) [Saccharomyces cerevisiae]
Length = 174
Score = 63.6 bits (152), Expect = 1e-09
Identities = 43/133 (32%), Positives = 66/133 (49%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM ++ K+ LN+ VGE+ L A + ++SGQ P+ +K+R +V +F IR
Sbjct: 7 NPMRDLKIEKLVLNISVGESGDR---LTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
I T+R K E L+R + + +RD R+F GNF G+ E + I +
Sbjct: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRD------RNFSATGNFGFGIDEHIDL-GIKY 116
Query: 430 DAVDAIRGMDIAI 468
D I GMD +
Sbjct: 117 DPSIGIFGMDFYV 129
>gi|6321522|ref|NP_011599.1|RPL11B| 60S ribosomal protein L11B
(L16B) (rp39B) (YL22); Rpl11bp >gi|71107|pir||R5BY16
ribosomal protein L11.e.B, cytosolic - yeast
(Saccharomyces cerevisiae) >gi|1323123|emb|CAA97087|
(Z72870) ORF YGR085c [Saccharomyces cerevisiae]
Length = 174
Score = 63.6 bits (152), Expect = 1e-09
Identities = 43/133 (32%), Positives = 66/133 (49%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM ++ K+ LN+ VGE+ L A + ++SGQ P+ +K+R +V +F IR
Sbjct: 7 NPMRDLKIEKLVLNISVGESGDR---LTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
I T+R K E L+R + + +RD R+F GNF G+ E + I +
Sbjct: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRD------RNFSATGNFGFGIDEHIDL-GIKY 116
Query: 430 DAVDAIRGMDIAI 468
D I GMD +
Sbjct: 117 DPSIGIFGMDFYV 129
>gi|1173055|sp|P46287|RL11_MEDSA 60S RIBOSOMAL PROTEIN L11 (L5)
>gi|541961|pir||S42497 ribosomal protein L11.e - alfalfa
>gi|1076504|pir||S51819 RL5 ribosomal protein - alfalfa
>gi|463252|emb|CAA55090| (X78284) RL5 ribosomal protein
[Medicago sativa]
Length = 181
Score = 62.8 bits (150), Expect = 2e-09
Identities = 42/134 (31%), Positives = 68/134 (50%)
Frame = +1
Query: 67 SNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNG 246
SNPM ++ K+ LN+ VGE+ L A + ++SGQ P+ +K+R +V SF IR
Sbjct: 8 SNPMREIKVQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
Query: 247 WPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID 426
I C T+R K + L+ + V+++ + R+F G F G++E + I
Sbjct: 65 EKIACYVTVRGDKAMQLLESGLK-----VKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIK 117
Query: 427 FDAVDAIRGMDIAI 468
+D I GMD +
Sbjct: 118 YDPSTGIYGMDFFV 131
>gi|4322|emb|CAA25515| (X01029) ribosomal protein L16 [Saccharomyces
pastorianus]
Length = 174
Score = 62.5 bits (149), Expect = 3e-09
Identities = 42/133 (31%), Positives = 66/133 (49%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM ++ K+ LN+ VG++ L A + ++SGQ P+ +K+R +V +F IR
Sbjct: 7 NPMRDLKIEKLVLNISVGQSGDR---LTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
I T+R K E L+R + + +RD R+F GNF G+ E + I +
Sbjct: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRD------RNFSATGNFGFGIDEHIDL-GIKY 116
Query: 430 DAVDAIRGMDIAI 468
D I GMD +
Sbjct: 117 DPSIGIFGMDFYV 129
>gi|6470325|gb|AAF13719.1|AF201080_1 (AF201080) ribosomal protein
L11 [Schizosaccharomyces pombe]
Length = 166
Score = 62.1 bits (148), Expect = 3e-09
Identities = 39/127 (30%), Positives = 65/127 (50%)
Frame = +1
Query: 88 RLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGWPIGCKT 267
R+ K+ LN+ +GE+ L A + ++SGQ P+ +K+R ++ F IR I C
Sbjct: 5 RISKLVLNISLGESGDR---LTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRNEKIACHV 61
Query: 268 TLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDFDAVDAI 447
T+R K E L+R + V+++ + R+F GNF G++E + I +D I
Sbjct: 62 TVRGPKAEEILERGLK-----VKEYE-LKKRNFSATGNFGFGIQEHIDL-GIKYDPSIGI 114
Query: 448 RGMDIAI 468
GMD +
Sbjct: 115 YGMDFYV 121
>gi|1172817|sp|P42796|R112_ARATH 60S RIBOSOMAL PROTEIN L11B (L16B)
>gi|550547|emb|CAA57396| (X81800) ribosomal protein L16
[Arabidopsis thaliana] >gi|4539392|emb|CAB37458.1|
(AL035526) ribosomal protein L11, cytosolic [Arabidopsis
thaliana]
Length = 184
Score = 61.7 bits (147), Expect = 4e-09
Identities = 42/134 (31%), Positives = 68/134 (50%)
Frame = +1
Query: 67 SNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNG 246
SNPM ++ K+ LN+ VGE+ L A + ++SGQ P+ +K+R +V SF IR
Sbjct: 10 SNPMRDIKVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRN 66
Query: 247 WPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID 426
I C T+R K + L+ + V+++ + R+F G F G++E + I
Sbjct: 67 EKIACYVTVRGEKAMQLLESGLK-----VKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIK 119
Query: 427 FDAVDAIRGMDIAI 468
+D I GMD +
Sbjct: 120 YDPSTGIYGMDFYV 133
>gi|4586222|emb|CAB40967.1| (AJ238271) ribosomal protein L11
[Oryzias latipes]
Length = 177
Score = 61.3 bits (146), Expect = 6e-09
Identities = 47/155 (30%), Positives = 76/155 (48%), Gaps = 2/155 (1%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM R+ K+ LN+ VGE+ L A + +++GQ P+ +K+R +V SF IR
Sbjct: 9 NPMKELRIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNE 65
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
I T+R +K E L++ + VR++ + +F GNF G++E + I +
Sbjct: 66 KIAVHCTVRGAKAEEILEKGLK-----VREYE-LRKNNFSDTGNFGFGIQEHIDL-GIKY 118
Query: 430 DAVDAIRGMD--IAITTTANSDAEAKALLDAFNFPFR 534
D I G+D + + T S A+ K F R
Sbjct: 119 DPSIGIYGLDFYVVLGRTGFSIADKKRQKSRIGFRLR 155
>gi|1172816|sp|P42795|R111_ARATH 60S RIBOSOMAL PROTEIN L11A (L16A)
>gi|624938|emb|CAA57395| (X81799) ribosomal protein L16
[Arabidopsis thaliana]
Length = 182
Score = 61.3 bits (146), Expect = 6e-09
Identities = 42/134 (31%), Positives = 68/134 (50%)
Frame = +1
Query: 67 SNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNG 246
SNPM ++ K+ LN+ VGE+ L A + ++SGQ P+ +K+R +V SF IR
Sbjct: 8 SNPMRDIKVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
Query: 247 WPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID 426
I C T+R K + L+ + V+++ + R+F G F G++E + I
Sbjct: 65 EKIACYVTVRGEKAMQLLESGLK-----VKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIR 117
Query: 427 FDAVDAIRGMDIAI 468
+D I GMD +
Sbjct: 118 YDPSTGIYGMDFYV 131
>gi|1172969|sp|P42794|RL11_ARATH 60S RIBOSOMAL PROTEIN L11 (L16)
>gi|629552|pir||S49033 ribosomal protein L11.e -
Arabidopsis thaliana >gi|550544|emb|CAA57394| (X81798)
ribosomal protein L16 [Arabidopsis thaliana]
Length = 182
Score = 60.1 bits (143), Expect = 1e-08
Identities = 41/134 (30%), Positives = 68/134 (50%)
Frame = +1
Query: 67 SNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNG 246
SNPM ++ K+ LN+ VGE+ L A + ++SGQ P+ +K+R +V SF IR
Sbjct: 8 SNPMRDIKVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
Query: 247 WPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID 426
I C T+R K + L+ + V+++ + R+F G F G++E + I
Sbjct: 65 EKIACYVTVRGEKAMQLLESGLK-----VKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIK 117
Query: 427 FDAVDAIRGMDIAI 468
+D I GM+ +
Sbjct: 118 YDPSTGIYGMEFYV 131
>gi|6226544|sp|P39026|RL11_HUMAN 60S RIBOSOMAL PROTEIN L11
>gi|71106|pir||R5RT11 ribosomal protein L11 precursor -
rat >gi|57678|emb|CAA44072| (X62146) ribosomal protein
L11 [Rattus rattus] >gi|3115334 (L05092) ribosomal
protein L11 [Homo sapiens]
Length = 178
Score = 59.7 bits (142), Expect = 2e-08
Identities = 41/133 (30%), Positives = 68/133 (50%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM R+ K+ LN+ VGE+ L A + +++GQ P+ +K+R +V SF IR
Sbjct: 10 NPMRELRIRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNE 66
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
I T+R +K E L++ + VR++ + +F GNF G++E + I +
Sbjct: 67 KIAVHCTVRGAKAEEILEKGLK-----VREYE-LRKNNFSDTGNFGFGIQEHIDL-GIKY 119
Query: 430 DAVDAIRGMDIAI 468
D I G+D +
Sbjct: 120 DPSIGIYGLDFYV 132
>gi|4506595|ref|NP_000966.1|| ribosomal protein L11
>gi|631361|pir||S45049 ribosomal protein L11 - human
>gi|495126|emb|CAA55816| (X79234) ribosomal protein L11
[Homo sapiens]
Length = 178
Score = 57.4 bits (136), Expect = 8e-08
Identities = 40/133 (30%), Positives = 67/133 (50%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM R+ K+ LN+ VGE+ L A + +++GQ P+ +K+R +V SF IR
Sbjct: 10 NPMRELRIRKLCLNICVGESGGR---LTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNE 66
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
I +R +K E L++ + VR+ + +F GNF G++E + I++
Sbjct: 67 KIAVHCAVRGAKAEEILEKGLK-----VRELE-LRKNNFSDTGNFGFGIQEHIDL-GIEY 119
Query: 430 DAVDAIRGMDIAI 468
D I G+D +
Sbjct: 120 DPSIGIYGLDFYV 132
>gi|3914659|sp|Q29205|RL11_PIG 60S RIBOSOMAL PROTEIN L11
Length = 166
Score = 55.8 bits (132), Expect = 2e-07
Identities = 35/113 (30%), Positives = 59/113 (51%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
NPM R+ K+ LN+ VGE+ L + +++GQ P+ +K+R +V SF IR
Sbjct: 10 NPMRELRIRKLCLNICVGESGDR---LTRXAKVLEQLTGQTPVFSKARYTVRSFGIRRNE 66
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQV 408
I T+R +K E L++ + VR++ + +F GNF G++E +
Sbjct: 67 KIAVHCTVRGAKAEEILEKGLK-----VREYE-LRKNNFSDTGNFGFGIQEHI 113
>gi|132999|sp|P20031|RL5_PROVU 50S RIBOSOMAL PROTEIN L5 >gi|551923
(M36264) r-protein L5 [Proteus vulgaris]
Length = 43
Score = 54.7 bits (129), Expect = 6e-07
Identities = 26/43 (60%), Positives = 32/43 (73%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEA 129
M +L + YK EVV L+ +FGY + M VPR+ KITLNMGVGEA
Sbjct: 1 MAKLHDYYKDEVVQKLMSQFGYHSVMQVPRVEKITLNMGVGEA 43
>gi|6093997|sp|O22540|RL11_ORYSA 60S RIBOSOMAL PROTEIN L11
>gi|2570507 (AF022736) ribosomal protein [Oryza sativa]
Length = 182
Score = 53.1 bits (125), Expect = 2e-06
Identities = 40/134 (29%), Positives = 62/134 (45%)
Frame = +1
Query: 67 SNPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNG 246
SNPM ++ K+ LN+ VGE+ L A + ++ GQ P+ +K+R +V SF IR
Sbjct: 8 SNPMRDIKVQKLVLNISVGESGDR---LTRASKVLEQLIGQSPVFSKARYTVRSFGIRRN 64
Query: 247 WPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID 426
I C T+R K + L+ + + C + RS G F G++E + I
Sbjct: 65 EKIACYVTVRGEKAMQLLESGLKVK-EC-----ELLRRSCSETGCFGFGIQEHIDL-GIQ 117
Query: 427 FDAVDAIRGMDIAI 468
D GMD +
Sbjct: 118 CDPSTGFYGMDFYV 131
>gi|1350760|sp|P49623|RL5_SERMA 50S RIBOSOMAL PROTEIN L5 >gi|551982
(M36265) r-protein L5 [Serratia marcescens]
Length = 43
Score = 52.7 bits (124), Expect = 2e-06
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEA 129
M +L + YK EVV L+ +F Y++ M VPR+ KITLNMGVGEA
Sbjct: 1 MAKLHDYYKDEVVKQLMSQFDYNSVMQVPRVEKITLNMGVGEA 43
>gi|132777|sp|P24119|RL11_TETTH 60S RIBOSOMAL PROTEIN L11 (L21)
>gi|84358|pir||JU0456 ribosomal protein L11.e -
Tetrahymena thermophila (SGC5) >gi|1333641 (M37892)
ribosomal protein L21 [Tetrahymena thermophila]
Length = 172
Score = 52.3 bits (123), Expect = 3e-06
Identities = 34/133 (25%), Positives = 62/133 (46%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
N M ++ K+ +N VGE+ L A + +SGQ P+ +++R ++ SF I+
Sbjct: 7 NKMREVKIAKLVINCCVGESGDK---LTKAAKVLKDLSGQEPVFSRARYTIRSFGIKRNE 63
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDF 429
+ T+R K + L R + + +R ++F GNF G++E + + +
Sbjct: 64 KMAVHVTIRGDKARDILTRGLKVKEMELR------KKNFSNTGNFGFGIQEHIDL-GMKY 116
Query: 430 DAVDAIRGMDIAI 468
D I GMD +
Sbjct: 117 DPSTGIFGMDFYV 129
>gi|585888|sp|P37436|RL5_SALTY 50S RIBOSOMAL PROTEIN L5 >gi|552023
(M36266) r-protein L5 [Salmonella typhimurium]
Length = 43
Score = 51.9 bits (122), Expect = 4e-06
Identities = 25/43 (58%), Positives = 31/43 (71%)
Frame = +1
Query: 1 MTRLENMYKKEVVPALIKRFGYSNPMAVPRLVKITLNMGVGEA 129
M +L + YK EVV L+ F Y++ M VPR+ KITLNMGVGEA
Sbjct: 1 MAKLHDYYKDEVVNKLMTEFNYNSVMQVPRVEKITLNMGVGEA 43
>gi|4512679|gb|AAD21733.1| (AC006931) 60S ribosomal protein L11B
[Arabidopsis thaliana]
Length = 182
Score = 50.8 bits (119), Expect = 8e-06
Identities = 38/127 (29%), Positives = 64/127 (49%), Gaps = 7/127 (5%)
Frame = +1
Query: 88 RLVKITLNMGVGE-------AATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNG 246
++ K+ LN+ VGE A+ V + ++SGQ P+ +K+R +V SF IR
Sbjct: 5 KVQKLVLNISVGESGDRLTRASKVPPVFYPFSVVLEQLSGQTPVFSKARYTVRSFGIRRN 64
Query: 247 WPIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEID 426
I C T+R K + L+ + V+++ + R+F G F G++E + I
Sbjct: 65 EKIACYVTVRGEKAMQLLESGLK-----VKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIK 117
Query: 427 FDAVDAIRGMDIAI 468
+D I GMD +
Sbjct: 118 YDPSTGIYGMDFYV 131
>gi|2500241|sp|Q94793|RL11_TOXCA 60S RIBOSOMAL PROTEIN L11
>gi|1498473 (U63521) 60S ribosomal protein [Toxocara
canis]
Length = 125
Score = 49.6 bits (116), Expect = 2e-05
Identities = 33/113 (29%), Positives = 58/113 (51%)
Frame = +1
Query: 70 NPMAVPRLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGW 249
N M ++ K+ LN+ VGE L A + +++GQ P+ +K+R +V +F IR
Sbjct: 17 NVMRELKIQKLCLNICVGEFGDR---LTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRNE 73
Query: 250 PIGCKTTLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQV 408
I T+R K E L++ + V+++ + +F GNF +GV+E +
Sbjct: 74 KIAVHCTVRGPKAEEILEKGLK-----VKEYE-LYKENFSDTGNFGLGVQEHI 120
>gi|1246369|dbj|BAA12249.1| (D84173) ribosomal protein L11
[Paramecium caudatum]
Length = 166
Score = 48.4 bits (113), Expect = 4e-05
Identities = 37/139 (26%), Positives = 67/139 (47%), Gaps = 2/139 (1%)
Frame = +1
Query: 88 RLVKITLNMGVGEAATNKKVLENAVADMAKISGQRPIVTKSRISVASFKIRNGWPIGCKT 267
R+ K+ +++ GE+ L A + ++GQ+P+ K+R +V SF IR I
Sbjct: 5 RIEKLMVHICAGESGDK---LTKAAKVLEDLTGQKPVFGKARYTVRSFGIRRNEKISVYC 61
Query: 268 TLRRSKMYEFLDRLINISLPCVRDFRGIPPRSFDGRGNFNMGVKEQVVFPEIDFDAVDAI 447
T+R + + L R + + + R+F GNF +G++E + + +D I
Sbjct: 62 TIRGDQARDILVRGLRVK------EMELKKRNFSDSGNFGLGIQEHIDL-GLKYDPYTGI 114
Query: 448 RGMD--IAITTTANSDAEAKA 504
GMD +A++ AE K+
Sbjct: 115 FGMDFYVALSRPGLRVAERKS 135
>gi|4504489|ref|NP_000403.1|| histidine-rich glycoprotein
>gi|123523|sp|P04196|HRG_HUMAN HISTIDINE-RICH
GLYCOPROTEIN PRECURSOR (HISTIDINE-PROLINE RICH
GLYCOPROTEIN) (HPRG) >gi|68793|pir||KGHUGH
histidine-rich glycoprotein precursor - human >gi|306888
(M13149) histidine-rich glycoprotein precursor [Homo
sapiens] >gi|2280514|dbj|BAA21613.1| (AB005803)
histidine-rich glycoprotein [Homo sapiens]
Length = 525
Score = 33.6 bits (75), Expect = 1.2
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -3
Query: 436 PHRNRSQEKQPAP*HPY*NY-HDHQRNEEGYHGNHGH 329
PH++ S E+ P HP+ ++ H+H + + HG+H H
Sbjct: 351 PHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPH 387
>gi|123530|sp|P04929|HRPX_PLALO HISTIDINE-RICH GLYCOPROTEIN
PRECURSOR >gi|72400|pir||KGZQHL histidine-rich
glycoprotein precursor - Plasmodium lophurae
>gi|9999|emb|CAA25698| (X01469) histidine-rich protein
[Plasmodium lophurae] >gi|224316|prf||1101401A
protein,His rich [Plasmodium sp.]
Length = 351
Score = 32.8 bits (73), Expect = 2.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 442 HQPHRNRSQEKQPAP*HPY*NYHDHQRNEEGYHGNHGHKA 323
H+PH P P H + ++ H + G+H +H H A
Sbjct: 86 HEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAA 125
Score = 30.9 bits (68), Expect = 7.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Frame = -3
Query: 451 HV*HQPHRNRSQEKQP--------AP*HPY*NYHDHQRNEEGYHGNHGH 329
H H PH + P AP H + ++H H + +HG+H H
Sbjct: 189 HHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHH 237
>gi|3024322|sp|Q91994|OTX1_BRARE HOMEOBOX PROTEIN OTX1 (ZOTX1)
>gi|2133849|pir||I51751 homeotic protein otx1 - zebra
fish >gi|2133891|pir||I50509 orthodenticle-related
protein 1 - zebra fish >gi|540242 (U14591)
orthodenticle-related protein 1 [Danio rerio]
>gi|633131|dbj|BAA05158| (D26172) otx homeoprotein
[Danio rerio]
Length = 323
Score = 32.5 bits (72), Expect = 2.7
Identities = 15/45 (33%), Positives = 19/45 (41%)
Frame = -3
Query: 457 PFHV*HQPHRNRSQEKQPAP*HPY*NYHDHQRNEEGYHGNHGHKA 323
P H H PH+ P HP H H G+H +H H+A
Sbjct: 236 PMHSHHHPHQLSPMTASSMPTHP----HHHISQSSGHHHHHHHQA 276
>gi|1839437|bbs|177742 otx1=orthodenticle homeobox homolog
{C-terminal} [zebrafish, Peptide Partial, 240 aa]
Length = 240
Score = 32.5 bits (72), Expect = 2.7
Identities = 15/45 (33%), Positives = 19/45 (41%)
Frame = -3
Query: 457 PFHV*HQPHRNRSQEKQPAP*HPY*NYHDHQRNEEGYHGNHGHKA 323
P H H PH+ P HP H H G+H +H H+A
Sbjct: 153 PMHSHHHPHQLSPMTASSMPTHP----HHHISQSSGHHHHHHHQA 193
Database: nr
Posted date: Jan 18, 2000 12:56 PM
Number of letters in database: 136,619,797
Number of sequences in database: 443,958
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114878423
Number of Sequences: 443958
Number of extensions: 2127075
Number of successful extensions: 6299
Number of sequences better than 10.0: 178
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 6128
Number of HSP's gapped (non-prelim): 127
length of query: 180
length of database: 136,619,797
effective HSP length: 53
effective length of query: 126
effective length of database: 113,090,023
effective search space: 14249342898
effective search space used: 14249342898
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)