BLASTP 2.0.10 [Aug-26-1999] 

Query= XF-C04KB-GL05
         (405 letters)

Database: nr
           449,381 sequences; 138,416,789 total letters

                                                                Score     E
Sequences producing significant alignments:                     (bits)  Value

gi|116638|sp|P03624|COA2_BPPF3 MINOR COAT PROTEIN (ORF 483) >gi...    70    3e-11
gi|215383 (M19377) 50-kDa virion protein [Bacteriophage Pf3]          69    9e-11
gi|3402504|dbj|BAA32226| (AB015669) ORF C5 [Ralstonia solanacea...    34    1.8
gi|5901894|ref|NP_008816.1|| AT-binding transcription factor 1 ...    32    6.8
gi|976347 (L32832) zinc finger homeodomain protein [Homo sapien...    32    6.8
gi|3924672|gb|AAC79153.1| (AC004943) alpha-fetoprotein enhancer...    32    6.8

>gi|116638|sp|P03624|COA2_BPPF3 MINOR COAT PROTEIN (ORF 483)
           >gi|75720|pir||VCBPI3 minor coat protein - phage Pf3
           >gi|215374 (M11912) 50-kDa virion protein [Bacteriophage
           Pf3]
           Length = 483
           
 Score = 70.2 bits (169), Expect = 3e-11
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 5/102 (4%)

Query: 297 PSFCSWASVVCDFIDWVKSDEFLKKPLVPPDVPYVDKLPQAKTWSSGLGEGACPSPTTIP 356
           PSFCSWA+ VCD+ DW + +   ++P +   +  +D L + K  S   G  +CP+P  + 
Sbjct: 383 PSFCSWATAVCDWFDWTQ-EPIDEEPDLSGIISDIDDLERTKDIS--FGSKSCPAPIALD 439

Query: 357 IEFSGYKTSVEISYQPFCDFAALMRPVVIVIATILAAYIAGG 398
           IEF     SV++S++ FC+ A ++  +V+  A +LAAYI  G
Sbjct: 440 IEF--LDMSVDLSFEWFCELAGIIYFMVMASAYVLAAYITLG 479


>gi|215383 (M19377) 50-kDa virion protein [Bacteriophage Pf3]
           Length = 483
           
 Score = 68.7 bits (165), Expect = 9e-11
 Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 5/102 (4%)

Query: 297 PSFCSWASVVCDFIDWVKSDEFLKKPLVPPDVPYVDKLPQAKTWSSGLGEGACPSPTTIP 356
           PSFCSWA+ VCD+ DW + +   ++P +   +  +D   + K  S   G  +CP+P  + 
Sbjct: 383 PSFCSWATAVCDWFDWTQ-EPIDEEPDLSGIISDIDDFERTKDIS--FGSKSCPAPIALD 439

Query: 357 IEFSGYKTSVEISYQPFCDFAALMRPVVIVIATILAAYIAGG 398
           IEF     SV++S++ FC+ A ++  +V+  A +LAAYI  G
Sbjct: 440 IEF--LDMSVDLSFEWFCELAGIIYFMVMASAYVLAAYITLG 479


>gi|3402504|dbj|BAA32226| (AB015669) ORF C5 [Ralstonia solanacearum]
           Length = 180
           
 Score = 34.4 bits (77), Expect = 1.8
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 339 TWSSGLGEGACPSPTTIPIEFSGYKTSVEISYQPFCDFAALMRPVVIVIATILAAYIAGG 398
           T  SG G    P P+ +     G   S   S +P CD A + RPV+I  A + AA I  G
Sbjct: 116 TPDSGWGADTAPCPSDLTASIHGMPISW--SLKPVCDGADMFRPVIIACAWLGAALIVIG 173


>gi|5901894|ref|NP_008816.1|| AT-binding transcription factor 1
            >gi|283975|pir||A41948 alpha-fetoprotein enhancer-binding
            protein - human >gi|219430|dbj|BAA01095| (D10250)
            alpha-fetoprotein enhancer binding protein [Homo sapiens]
            Length = 2783
            
 Score = 32.5 bits (72), Expect = 6.8
 Identities = 22/72 (30%), Positives = 36/72 (49%), Gaps = 6/72 (8%)

Query: 207  QSVPDYSSGLPPSVILDTDLGQLVRSDPSTVNAVLTDSQTGAVLLTPEIVSALNKLRRSL 266
            + + D+ S    SV L+ D  +L   D S+VN  +TD+ TG      +  +A N     +
Sbjct: 1894 EGIEDFESPSMSSVNLNFDQTKLDNDDCSSVNTAITDTTTG------DEGNADNDSATGI 1947

Query: 267  EDELKASHAPDQ 278
              E K+S AP++
Sbjct: 1948 ATETKSSSAPNE 1959


>gi|976347 (L32832) zinc finger homeodomain protein [Homo sapiens]
            >gi|1585921|prf||2202255A AT motif-binding factor 1 [Homo
            sapiens]
            Length = 3703
            
 Score = 32.5 bits (72), Expect = 6.8
 Identities = 22/72 (30%), Positives = 36/72 (49%), Gaps = 6/72 (8%)

Query: 207  QSVPDYSSGLPPSVILDTDLGQLVRSDPSTVNAVLTDSQTGAVLLTPEIVSALNKLRRSL 266
            + + D+ S    SV L+ D  +L   D S+VN  +TD+ TG      +  +A N     +
Sbjct: 2808 EGIEDFESPSMSSVNLNFDQTKLDNDDCSSVNTAITDTTTG------DEGNADNDSATGI 2861

Query: 267  EDELKASHAPDQ 278
              E K+S AP++
Sbjct: 2862 ATETKSSSAPNE 2873


>gi|3924672|gb|AAC79153.1| (AC004943) alpha-fetoprotein
            enhancer-binding protein; 99% identical to A41948
            (PID:g283975) [Homo sapiens]
            Length = 2553
            
 Score = 32.5 bits (72), Expect = 6.8
 Identities = 22/72 (30%), Positives = 36/72 (49%), Gaps = 6/72 (8%)

Query: 207  QSVPDYSSGLPPSVILDTDLGQLVRSDPSTVNAVLTDSQTGAVLLTPEIVSALNKLRRSL 266
            + + D+ S    SV L+ D  +L   D S+VN  +TD+ TG      +  +A N     +
Sbjct: 1658 EGIEDFESPSMSSVNLNFDQTKLDNDDCSSVNTAITDTTTG------DEGNADNDSATGI 1711

Query: 267  EDELKASHAPDQ 278
              E K+S AP++
Sbjct: 1712 ATETKSSSAPNE 1723


  Database: nr
    Posted date:  Jan 29, 2000 11:59 PM
  Number of letters in database: 138,416,789
  Number of sequences in database:  449,381
  
Lambda     K      H
   0.319    0.136    0.418 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106011023
Number of Sequences: 449381
Number of extensions: 4300578
Number of successful extensions: 9365
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9354
Number of HSP's gapped (non-prelim): 11
length of query: 405
length of database: 138,416,789
effective HSP length: 53
effective length of query: 352
effective length of database: 114,599,596
effective search space: 40339057792
effective search space used: 40339057792
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 71 (32.1 bits)