BLASTP 2.0.10 [Aug-26-1999]
Query= XF-06C06-GL56
(164 letters)
Database: nr
455,460 sequences; 140,124,617 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|6118008|gb|AAF03956.1|AF157835_13 (AF157835) P13 [Bacterioph... 106 1e-22
gi|126602|sp|P11187|LYCV_BPPH2 LYSOZYME (LYSIS PROTEIN) (MURAMI... 100 7e-21
gi|126604|sp|P07540|LYCV_BPPZA LYSOZYME (LYSIS PROTEIN) (MURAMI... 100 1e-20
gi|6016519|sp|Q37896|LYCV_BPB03 LYSOZYME (LYSIS PROTEIN) (MURAM... 99 3e-20
gi|915372 (U28154) lysozyme [Haemophilus somnus] 96 1e-19
gi|3676086|emb|CAA09710| (AJ011581) gp19 [bacteriophage PS119] 89 2e-17
gi|138699|sp|P09963|LYCV_BPP22 LYSOZYME (LYSIS PROTEIN) >gi|674... 87 7e-17
gi|1143594|emb|CAA47617.1| (X67137) gp19 protein [Salmonella ty... 86 1e-16
gi|3676081|emb|CAA09706| (AJ011580) gp19 [bacteriophage PS34] 84 7e-16
gi|6010396|gb|AAF01099.1|AF083977_18 (AF083977) Lys [Bacterioph... 83 1e-15
gi|126600|sp|P27359|LYCV_BPP21 ENDOLYSIN (LYSIS PROTEIN) (LYSOZ... 81 6e-15
gi|2126182|pir||JC6047 regB protein - Serratia marcescens >gi|9... 79 2e-14
gi|2493335|sp|P78285|LYCV_ECOLI PROBABLE ENDOLYSIN (LYSIS PROTE... 78 6e-14
gi|126601|sp|P10439|LYCV_BPPA2 ENDOLYSIN (LYSIS PROTEIN) (LYSOZ... 76 2e-13
gi|2126180|pir||S63610 probable prophage lysozyme nucD - Serrat... 74 8e-13
gi|224285|prf||1101273F ORF 4 [Bacteriophage HP1] 59 2e-08
gi|1708889|sp|P51728|LYCV_BPHP1 LYSOZYME PRECURSOR (LYSIS PROTE... 59 2e-08
gi|1787836 (AE000252) putative lysozyme [Escherichia coli] 58 5e-08
gi|522266 (L33769) lysin [Bacteriophage bIL67] 57 9e-08
gi|1085997|pir||S49014 lysin - Lactococcus phage c2 >gi|506456|... 55 3e-07
gi|6016520|sp|P13003|LYCV_BPPHV LYSOZYME (BACTERIOPHAGE LYSIN) ... 55 3e-07
gi|4585422|gb|AAD25450.1|AF125520_45 (AF125520) endolysin [Bact... 52 3e-06
gi|3192716 (AF064539) gp54 [Bacteriophage N15] 51 7e-06
gi|227220|prf||1617096B lysozyme [Colitis phage] 50 9e-06
gi|4335686|gb|AAD17382| (AF034975) R protein [Bacteriophage H-19B] 49 2e-05
gi|6759968|gb|AAF28126.1|AF153317_22 (AF153317) endolysin [Shig... 49 2e-05
gi|974762|emb|CAA61013| (X87673) gp17 lysozyme [Bacteriophage P... 44 7e-04
gi|76366|pir||S05335 lysis protein - Lactococcus phage Phi-vML3 41 0.005
gi|1196687 (M14431) pre gene-16 ORF protein; putative [Bacterio... 32 2.9
>gi|6118008|gb|AAF03956.1|AF157835_13 (AF157835) P13 [Bacteriophage
APSE-1]
Length = 146
Score = 106 bits (262), Expect = 1e-22
Identities = 65/147 (44%), Positives = 87/147 (58%), Gaps = 7/147 (4%)
Query: 4 IGEEGIALIKFFEGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLRARLAK 63
I E+G+ LIK +EG +L Y C G T+GYG T D+ +++A+A LR +A
Sbjct: 3 ISEKGLVLIKRYEGLRLKAYQCRAGRWTLGYGHTHNLNIGDVI--TQEQAEAFLREDIA- 59
Query: 64 EFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKW 123
+ + ++VPL Q Q+DA+ SL FNIG AF STLLK+LN GD +GA +F W
Sbjct: 60 QVTALLNTQIKVPLTQNQYDAICSLVFNIGMTAFTTSTLLKKLNVGDYSGASAEFMKWSK 119
Query: 124 A---GGRMQ-SGLIIRRAAERALFEGS 146
A G R GLI RR AE+ALFE +
Sbjct: 120 AKVNGKRTPLPGLIKRRQAEKALFESA 146
>gi|126602|sp|P11187|LYCV_BPPH2 LYSOZYME (LYSIS PROTEIN)
(MURAMIDASE) (MORPHOGENESIS PROTEIN 2)
>gi|67432|pir||WMBPP9 lysozyme (EC 3.2.1.17) - phage
phi-29 >gi|15679|emb|CAA28632| (X04962) gene 15 product
(AA 1-258); put. lysozyme [Bacteriophage phi-29]
>gi|215333 (M14782) morphogenesis protein [Bacteriophage
phi-29] >gi|225370|prf||1301270K gene 15 [Bacteriophage
phi-29]
Length = 258
Score = 100 bits (247), Expect = 7e-21
Identities = 62/142 (43%), Positives = 83/142 (57%), Gaps = 4/142 (2%)
Query: 4 IGEEGIALIKFFEGCKLNPYTCPGGV--LTIGYGETGKHVTPDMCLANEQEADAMLRARL 61
I + GI LIK FEG +L Y TIGYG G V+P + +Q D MLR +
Sbjct: 3 ISQAGINLIKSFEGLQLKAYKAVPTEKHYTIGYGHYGSDVSPRQVITAKQAED-MLRDDV 61
Query: 62 AKEFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVW 121
+ F V + ++V + Q QFDALVS ++N+G GAF S+LL+ LN G A A +F W
Sbjct: 62 -QAFVDGVNKALKVSVTQNQFDALVSFAYNVGLGAFRSSSLLEYLNEGRTALAAAEFPKW 120
Query: 122 KWAGGRMQSGLIIRRAAERALF 143
+GG++ GLI RRA E+ALF
Sbjct: 121 NKSGGKVYQGLINRRAQEQALF 142
>gi|126604|sp|P07540|LYCV_BPPZA LYSOZYME (LYSIS PROTEIN)
(MURAMIDASE) (LATE PROTEIN GP15) >gi|67433|pir||WMBP15
lysozyme (EC 3.2.1.17) - phage PZA >gi|216064 (M11813)
morphogenesis protein B [Bacteriophage PZA]
Length = 258
Score = 99.8 bits (245), Expect = 1e-20
Identities = 61/142 (42%), Positives = 83/142 (57%), Gaps = 4/142 (2%)
Query: 4 IGEEGIALIKFFEGCKLNPYTCPGGV--LTIGYGETGKHVTPDMCLANEQEADAMLRARL 61
I + GI LIK FEG +L Y TIGYG G V+P + +Q D MLR +
Sbjct: 3 ISQAGINLIKSFEGLQLKAYKAVPTEKHYTIGYGHYGSDVSPRQVITAKQAED-MLRDDV 61
Query: 62 AKEFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVW 121
+ F V + ++V + Q QFDALVS ++N+G GAF S+LL+ LN G A A +F W
Sbjct: 62 -QAFVDGVNKALKVSVTQNQFDALVSFAYNVGLGAFRSSSLLEYLNEGRTALAAAEFPRW 120
Query: 122 KWAGGRMQSGLIIRRAAERALF 143
+GG++ GL+ RRA E+ALF
Sbjct: 121 NKSGGKVYQGLVNRRAQEQALF 142
>gi|6016519|sp|Q37896|LYCV_BPB03 LYSOZYME (LYSIS PROTEIN)
(MURAMIDASE) (MORPHOGENESIS PROTEIN 2)
>gi|1429244|emb|CAA67646| (X99260) morphogenesis protein
[Bacteriophage B103]
Length = 263
Score = 98.7 bits (242), Expect = 3e-20
Identities = 59/142 (41%), Positives = 84/142 (58%), Gaps = 4/142 (2%)
Query: 4 IGEEGIALIKFFEGCKLNPYTC--PGGVLTIGYGETGKHVTPDMCLANEQEADAMLRARL 61
I + GI LIK FEG + Y TIGYG G V P ++ E++A+ +LR +
Sbjct: 3 ISQAGINLIKSFEGLRTKAYKAVPTEKYYTIGYGHYGSDVHPCQVIS-EEKAEKLLRDDV 61
Query: 62 AKEFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVW 121
+EF V + ++V + Q QFDALVS ++N+G GA STLL+ LNAG+ A +F W
Sbjct: 62 -QEFVDGVDKLLKVDVTQSQFDALVSFAYNVGLGALKSSTLLQYLNAGNFQKAANEFLKW 120
Query: 122 KWAGGRMQSGLIIRRAAERALF 143
+GG++ +GL+ RR ER LF
Sbjct: 121 NKSGGKVYNGLVKRREQERTLF 142
>gi|915372 (U28154) lysozyme [Haemophilus somnus]
Length = 178
Score = 96.3 bits (236), Expect = 1e-19
Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 4 IGEEGIALIKFFEGCKLNPYTCPGGVLTIGYGET---GKHVTPDMCLANEQEADAMLR-A 59
I ++G+ LI EGC+ +PY CP VLT+G G T GK++ P ++++ A
Sbjct: 31 ISQQGLDLIGNVEGCRRDPYHCPADVLTVGIGSTEANGKNIDPKKRYSDKEIAQRWAYDL 90
Query: 60 RLAKEFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFH 119
RLA++ +P Q FDA VS++FN+G G +STL K+ N G QF
Sbjct: 91 RLAEQCVNRYGNGKNLP--QGAFDAFVSITFNVGCGKMQKSTLFKQANQGFTPQLCHQFE 148
Query: 120 VWKWAGGRMQSGLIIRRAAERALFEG 145
W +AGG+ +GL+ RRA E+AL G
Sbjct: 149 RWIYAGGKKLNGLVARRAKEKALCLG 174
>gi|3676086|emb|CAA09710| (AJ011581) gp19 [bacteriophage PS119]
Length = 167
Score = 88.9 bits (217), Expect = 2e-17
Identities = 50/128 (39%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 16 EGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLRARL---AKEFEPAVRRD 72
EG + PY GVLT+ YG TGK + P E E A+L L A++ P ++ D
Sbjct: 37 EGVRYKPYKDVVGVLTVCYGHTGKDIMPGKTYT-EAECKALLNKDLITVARQINPYIKVD 95
Query: 73 VRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGGRMQSGL 132
+ + AL S +N+GAG F STLL+++N GD+ GA +Q W +AGG+ GL
Sbjct: 96 IPETTR----GALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGL 151
Query: 133 IIRRAAER 140
+ RR ER
Sbjct: 152 MTRREVER 159
>gi|138699|sp|P09963|LYCV_BPP22 LYSOZYME (LYSIS PROTEIN)
>gi|67434|pir||LZBP22 lysozyme (EC 3.2.1.17) - phage P22
>gi|215264 (M10997) gene 19 protein [Bacteriophage P22]
Length = 146
Score = 87.4 bits (213), Expect = 7e-17
Identities = 61/147 (41%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 1 MQTIGEEGIALIKFFEGCKLNPYTCPGGVLTIGYGETGK----HVTPDMCLANEQEADAM 56
M I GI +K EG +L Y+ G+ TIG G TGK V M + E+ ++ +
Sbjct: 1 MMQISSNGITRLKREEGERLKAYSDSRGIPTIGVGHTGKVDGNSVASGMTITAEKSSE-L 59
Query: 57 LRARLAKEFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALE 116
L+ L + E A+ VRVPL Q Q+DAL SL FNIG AF ST+L++LN + A +
Sbjct: 60 LKEDL-QWVEDAISSLVRVPLNQNQYDALCSLIFNIGKSAFAGSTVLRQLNLKNYQAAAD 118
Query: 117 QFHVWKWAGGRMQSGLIIRRAAERALF 143
F +WK A G+ L+ RR ERALF
Sbjct: 119 AFLLWKKA-GKDPDILLPRRRRERALF 144
>gi|1143594|emb|CAA47617.1| (X67137) gp19 protein [Salmonella
typhimurium bacteriophage ES18]
Length = 146
Score = 86.2 bits (210), Expect = 1e-16
Identities = 61/147 (41%), Positives = 81/147 (54%), Gaps = 7/147 (4%)
Query: 1 MQTIGEEGIALIKFFEGCKLNPYTCPGGVLTIGYGETGK----HVTPDMCLANEQEADAM 56
M I GI +K EG +L Y G+ TIG G TGK V M + E+ ++ +
Sbjct: 1 MMQISSNGITRLKREEGERLKAYPDSRGIPTIGVGHTGKVDGKPVVSGMTITAEKSSE-L 59
Query: 57 LRARLAKEFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALE 116
L+ L + E A+ VRVPL Q Q+DAL SL FNIG AF ST+L++LN + A +
Sbjct: 60 LKEDL-QWVEDAISSLVRVPLNQNQYDALCSLIFNIGKSAFAGSTVLRQLNLKNYQAAAD 118
Query: 117 QFHVWKWAGGRMQSGLIIRRAAERALF 143
F +WK A G+ L+ RR ERALF
Sbjct: 119 AFLLWKKA-GKDPDILLPRRRRERALF 144
>gi|3676081|emb|CAA09706| (AJ011580) gp19 [bacteriophage PS34]
Length = 167
Score = 83.9 bits (204), Expect = 7e-16
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 16 EGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLR---ARLAKEFEPAVRRD 72
EG + PY GVLT+ YG TGK + P E E A+L A +A++ P ++ D
Sbjct: 37 EGVRYKPYKDVVGVLTVCYGHTGKDIMPGKTYT-EAECKALLNKDLATVARQINPYIKVD 95
Query: 73 VRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGGRMQSGL 132
+ + + S +N+GAG F STLL+++N D+ GA +Q W +AGG+ GL
Sbjct: 96 IPETTR----GGIYSFVYNVGAGNFETSTLLRKINQVDIKGACDQLRRWTYAGGKQWKGL 151
Query: 133 IIRRAAER 140
+ RR ER
Sbjct: 152 MTRREIER 159
>gi|6010396|gb|AAF01099.1|AF083977_18 (AF083977) Lys [Bacteriophage
Mu]
Length = 171
Score = 83.5 bits (203), Expect = 1e-15
Identities = 54/125 (43%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 22 PYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLRARLAKEFEP---AVRRDVRVPLK 78
PY GVLT+ G TG PD+ + A+ M A L + +P A+ R VRVPL
Sbjct: 43 PYRDIAGVLTVCVGHTG----PDIEMRRYSHAECM--ALLDSDLKPVYAAIDRLVRVPLT 96
Query: 79 QQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGGRMQSGLIIRRAA 138
Q AL + FN G AF +STLLK+LNAGD AGA +Q W +A G GL+ RR
Sbjct: 97 PYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREV 156
Query: 139 ERALF 143
E A++
Sbjct: 157 EMAIW 161
>gi|126600|sp|P27359|LYCV_BPP21 ENDOLYSIN (LYSIS PROTEIN) (LYSOZYME)
>gi|67436|pir||LZBP21 lysozyme (EC 3.2.1.17) - phage 21
>gi|215468 (M65239) R [Bacteriophage 21]
Length = 165
Score = 80.8 bits (196), Expect = 6e-15
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 16 EGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLR---ARLAKEFEPAVRRD 72
EG PY GV T+ +G TGK + + E A+L A +A++ P ++ D
Sbjct: 35 EGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYT-KAECKALLNKDLATVARQINPYIKVD 93
Query: 73 VRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGGRMQSGL 132
+ ++ AL SL +N+GAG F STLL+++N GD+ GA +Q W +AGG+ GL
Sbjct: 94 IPETMR----GALYSLLYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGL 149
Query: 133 IIRRAAERAL 142
+ RR ER +
Sbjct: 150 MTRREIEREI 159
>gi|2126182|pir||JC6047 regB protein - Serratia marcescens
>gi|965070 (U31763) phage lysozyme [Serratia marcescens]
Length = 179
Score = 78.8 bits (191), Expect = 2e-14
Identities = 50/137 (36%), Positives = 69/137 (49%), Gaps = 3/137 (2%)
Query: 6 EEGIALIKFFEGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLRARLAKEF 65
E G+ LI EGC+L+PY C GV T G G T V PD + ++ AM +
Sbjct: 39 EAGLRLIADLEGCRLSPYQCSAGVWTQGIGHTAG-VIPDKAI--DERKAAMDLVDDVRRT 95
Query: 66 EPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAG 125
E + + L QQ +DA+++ +FN+G A RSTL+ L A +Q W +
Sbjct: 96 ERGMATCLPDTLSQQTYDAVIAFAFNVGVSAACRSTLVALLQQRQWRQACDQVPRWVYVN 155
Query: 126 GRMQSGLIIRRAAERAL 142
G+ GL RRA ERAL
Sbjct: 156 GKKNKGLEQRRAMERAL 172
>gi|2493335|sp|P78285|LYCV_ECOLI PROBABLE ENDOLYSIN (LYSIS PROTEIN)
(LYSOZYME) >gi|1778468 (U82598) hypothetical protein
[Escherichia coli] >gi|1786768 (AE000161) bacteriophage
lambda lysozyme homolog [Escherichia coli]
Length = 165
Score = 77.6 bits (188), Expect = 6e-14
Identities = 46/128 (35%), Positives = 68/128 (52%), Gaps = 8/128 (6%)
Query: 16 EGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLR---ARLAKEFEPAVRRD 72
EG PY GV T+ +G TGK + + E A+L A +A++ P ++ D
Sbjct: 35 EGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYT-KAECKALLNKDLATVARQINPYIKVD 93
Query: 73 VRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGGRMQSGL 132
+ + AL S +N+GAG F STLL+++N GD+ GA +Q W +AGG+ GL
Sbjct: 94 IPETTR----GALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGL 149
Query: 133 IIRRAAER 140
+ RR ER
Sbjct: 150 MTRREIER 157
>gi|126601|sp|P10439|LYCV_BPPA2 ENDOLYSIN (LYSIS PROTEIN) (LYSOZYME)
>gi|67435|pir||WMBPP2 lysozyme (EC 3.2.1.17) - phage PA2
>gi|215368 (J02580) ORF2 [Bacteriophage PA-2]
Length = 165
Score = 75.7 bits (183), Expect = 2e-13
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 16 EGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLR---ARLAKEFEPAVRRD 72
EG PY GV T+ +G TGK + + E A+L A +A++ P ++ D
Sbjct: 35 EGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYT-KAECKALLNKDLATVARQINPYIKVD 93
Query: 73 VRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGGRMQSGL 132
+ + L S +N+GAG F STLL+++N GD+ GA +Q W +AGG+ GL
Sbjct: 94 IPETTR----GPLYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGL 149
Query: 133 IIRRAAER 140
+ RR ER
Sbjct: 150 MTRREIER 157
>gi|2126180|pir||S63610 probable prophage lysozyme nucD - Serratia
marcescens >gi|509552 (U11698) putative phage lysozyme
[Serratia marcescens]
Length = 179
Score = 73.7 bits (178), Expect = 8e-13
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 6 EEGIALIKFFEGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLRARLAKEF 65
E G+ LI EGC+L+PY C GV T G G T + ++ D + R +
Sbjct: 39 EAGLRLIADLEGCRLSPYQCSAGVWTQGIGHTAGVIPGKAIDEHKAAMDLVDDVRRTERG 98
Query: 66 EPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAG 125
A D L QQ +DA ++ +FN+G A STL+ L A +Q W +
Sbjct: 99 MAACLPDT---LSQQTYDAAIAFAFNVGVSAACHSTLVALLQQRQWRQACDQLPRWVYVN 155
Query: 126 GRMQSGLIIRRAAERAL 142
G+ GL RRA ERAL
Sbjct: 156 GKKNKGLEQRRAMERAL 172
>gi|224285|prf||1101273F ORF 4 [Bacteriophage HP1]
Length = 176
Score = 58.9 bits (140), Expect = 2e-08
Identities = 47/154 (30%), Positives = 68/154 (43%), Gaps = 15/154 (9%)
Query: 4 IGEEGIALIKFFEGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLRARLAK 63
+ + +++I EGC NPY CP V T G G T + +E D R K
Sbjct: 25 VSPKAVSMIVNLEGCVRNPYKCPADVWTNGVGNTHNVDKTKILTIDEVRTDL---RRNIK 81
Query: 64 EFEPAVRRDVR-VPLKQQQFDALVSLSFNIGAG---AFHRSTLLKRLNAGDVAGA----- 114
E E + + Q Q+DA+VSL+FN+G G ++ T KR+ A
Sbjct: 82 EAENCINTYFNGEKMNQGQYDAMVSLAFNVGCGNIKTYYSKTQGKRVATTIYRAAQAENW 141
Query: 115 ---LEQFHVWKWAGGRMQSGLIIRRAAERALFEG 145
+ + +GGR+ GL RRA E+AL G
Sbjct: 142 ILMCNRIEDFNKSGGRVLKGLQNRRAKEKALCLG 175
>gi|1708889|sp|P51728|LYCV_BPHP1 LYSOZYME PRECURSOR (LYSIS PROTEIN)
(ENDOLYSIN) >gi|2120235|pir||S69532 lysozyme (EC
3.2.1.17) - phage HP1 >gi|1046253 (U24159) lysozyme
[Bacteriophage HP1]
Length = 186
Score = 58.9 bits (140), Expect = 2e-08
Identities = 49/154 (31%), Positives = 69/154 (43%), Gaps = 15/154 (9%)
Query: 4 IGEEGIALIKFFEGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQEADAMLRARLAK 63
+ + +++I EGC NPY CP V T G G T H + E LR R K
Sbjct: 35 VSPKAVSMIVNLEGCVRNPYKCPADVWTNGVGNT--HNVDKTKILTIDEVATDLR-RNIK 91
Query: 64 EFEPAVRRDVR-VPLKQQQFDALVSLSFNIGAG---AFHRSTLLKRLNAGDVAGA----- 114
E E + + Q Q+DA+VSL+FN+G G ++ T KR+ A
Sbjct: 92 EAENCINTYFNGEKMNQGQYDAMVSLAFNVGCGNIKTYYSKTQGKRVATTIYRAAQAENW 151
Query: 115 ---LEQFHVWKWAGGRMQSGLIIRRAAERALFEG 145
+ + +GGR+ GL RRA E+AL G
Sbjct: 152 ILMCNRIEDFNKSGGRVLKGLQNRRAKEKALCLG 185
>gi|1787836 (AE000252) putative lysozyme [Escherichia coli]
Length = 177
Score = 57.8 bits (137), Expect = 5e-08
Identities = 52/140 (37%), Positives = 69/140 (49%), Gaps = 17/140 (12%)
Query: 16 EGCKLNPYTCPGGVLTIGYGET---GKHVTPDMCLANEQ--EADAMLRARLAKEFEPAVR 70
EG Y G+ TI G T GK V P+M L+ E+ + +A+ R + E
Sbjct: 35 EGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVE---- 90
Query: 71 RDVRVPLKQQQFDALVSLS-FNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGG--- 126
R+++VPL + Q + S +NIG G ST KRLNAGD GA E W GG
Sbjct: 91 RNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDC 150
Query: 127 RMQS----GLIIRRAAERAL 142
R++S G +IRR E AL
Sbjct: 151 RIRSNNCYGQVIRRDQESAL 170
>gi|522266 (L33769) lysin [Bacteriophage bIL67]
Length = 227
Score = 57.0 bits (135), Expect = 9e-08
Identities = 50/150 (33%), Positives = 68/150 (45%), Gaps = 26/150 (17%)
Query: 4 IGEEGIALIKFFEGCKLNPYTCPGG--VLTIGYGETGKHVTPDMCLANEQEADAMLRARL 61
I + G+ LIK FEGC+L Y + TIG+G G VT Q AD+ L +
Sbjct: 3 ISQNGLNLIKEFEGCRLTAYKPVPWEKMYTIGWGHYG--VTAGTTWTQAQ-ADSQLEIDI 59
Query: 62 AKEFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHV- 120
++ P V V+ Q +FDALVSL++N G N G E H
Sbjct: 60 NNKYAPMVDAYVKGKANQNEFDALVSLAYNCG-------------NVFVADGWAEFSHAY 106
Query: 121 -------WKWAGGRMQSGLIIRRAAERALF 143
++ AGG++ GL+ RR AE LF
Sbjct: 107 CASMIPKYRNAGGQVLQGLVRRRQAELDLF 136
>gi|1085997|pir||S49014 lysin - Lactococcus phage c2
>gi|506456|emb|CAA84289| (Z34528) lysin [Lactococcus
bacteriophage c2]
Length = 241
Score = 55.4 bits (131), Expect = 3e-07
Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 4 IGEEGIALIKFFEGCKLNPYTCPGG--VLTIGYGETGKHVTPDMCLANEQEADAMLRARL 61
+ + G+ LIK FEGC+L Y + TIG+G G VT Q AD+ L +
Sbjct: 18 VSQNGLNLIKEFEGCRLTAYKPVPWEQMYTIGWGHYG--VTAGTTWTQAQ-ADSQLEIDI 74
Query: 62 AKEFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVW 121
++ P V V+ Q +FDALVSL++N G + A +
Sbjct: 75 NNKYAPMVDAYVKGKANQNEFDALVSLAYNCG-----NVFVADGWAPFSHAYCASMIPKY 129
Query: 122 KWAGGRMQSGLIIRRAAERALF 143
+ AGG++ GL+ RR AE LF
Sbjct: 130 RNAGGQVLQGLVRRRQAELNLF 151
>gi|6016520|sp|P13003|LYCV_BPPHV LYSOZYME (BACTERIOPHAGE LYSIN)
>gi|1146301 (L48605) lysin [Lactococcus bacteriophage
c2] >gi|2689214|emb|CAA34300| (X16178) lysin (AA 1-226)
[Bacteriophage phi-vml3]
Length = 226
Score = 55.4 bits (131), Expect = 3e-07
Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 4 IGEEGIALIKFFEGCKLNPYTCPGG--VLTIGYGETGKHVTPDMCLANEQEADAMLRARL 61
+ + G+ LIK FEGC+L Y + TIG+G G VT Q AD+ L +
Sbjct: 3 VSQNGLNLIKEFEGCRLTAYKPVPWEQMYTIGWGHYG--VTAGTTWTQAQ-ADSQLEIDI 59
Query: 62 AKEFEPAVRRDVRVPLKQQQFDALVSLSFNIGAGAFHRSTLLKRLNAGDVAGALEQFHVW 121
++ P V V+ Q +FDALVSL++N G + A +
Sbjct: 60 NNKYAPMVDAYVKGKANQNEFDALVSLAYNCG-----NVFVADGWAPFSHAYCASMIPKY 114
Query: 122 KWAGGRMQSGLIIRRAAERALF 143
+ AGG++ GL+ RR AE LF
Sbjct: 115 RNAGGQVLQGLVRRRQAELNLF 136
>gi|4585422|gb|AAD25450.1|AF125520_45 (AF125520) endolysin
[Bacteriophage 933W] >gi|5881637|dbj|BAA84328.1|
(AP000363) R [Bacteriophage VT2-Sa]
Length = 177
Score = 51.9 bits (122), Expect = 3e-06
Identities = 48/140 (34%), Positives = 66/140 (46%), Gaps = 17/140 (12%)
Query: 16 EGCKLNPYTCPGGVLTIGYGET---GKHVTPDMCLANEQ--EADAMLRARLAKEFEPAVR 70
EG Y G+ TI G T GK V P M L+ E+ +A+ R + E
Sbjct: 35 EGNHTTAYRDGAGIWTICRGATRVDGKPVIPGMKLSKEKCDRVNAIERDKALAWVE---- 90
Query: 71 RDVRVPLKQQQFDALVSLS-FNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGG--- 126
++++VPL + Q + S +NIG G ST +R+NAGD GA E W GG
Sbjct: 91 KNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYRRINAGDRKGACEAIRWWIKDGGRDC 150
Query: 127 RMQS----GLIIRRAAERAL 142
R++S G + RR E AL
Sbjct: 151 RIRSNNCYGQVSRRDQESAL 170
>gi|3192716 (AF064539) gp54 [Bacteriophage N15]
Length = 178
Score = 50.8 bits (119), Expect = 7e-06
Identities = 43/118 (36%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 16 EGCKLNPYTCPGGVLTIGYGET---GKHVTPDMCLANEQ--EADAMLRARLAKEFEPAVR 70
EG L Y G+ TI G T GK V M L + + +A+ R + V
Sbjct: 33 EGNSLTAYKDGSGIWTICRGATMVDGKPVMQGMKLTQAKCNQVNAIERNKALAW----VD 88
Query: 71 RDVRVPLKQQQFDALVSLS-FNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGGR 127
R+++VPL + Q + S +NIG G ST KRLNAGD GA E W GGR
Sbjct: 89 RNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRHGACEAIRWWIKDGGR 146
>gi|227220|prf||1617096B lysozyme [Colitis phage]
Length = 163
Score = 50.4 bits (118), Expect = 9e-06
Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 28 GVLTIGYGETGKHVTPDMCLANEQEADAMLRARLAKEFEPAVRRDVRVPLKQQQFDALVS 87
G+ T GYG TG + + A EA +L+ +A E V + + Q QFDALV
Sbjct: 32 GLYTWGYGHTGTNPPRSITRA---EALELLKRDVAYA-EDCVNKYAHPSINQAQFDALVD 87
Query: 88 LSFNIGAGAFHRSTLLK----RLNAGDVAGALEQFHVWKWAGGRMQSGLIIRRAAERALF 143
L N G G + + GD A ++ GG + GL+ R +ALF
Sbjct: 88 LVINAGPGPIVPDDVANDFDDAVRLGDWAKVRAILPQFRKQGGSVLLGLVRRAIGRQALF 147
Query: 144 EGSDWRAEEKQRRAA 158
+G W EK R A
Sbjct: 148 DGKQWDVAEKIGRNA 162
>gi|4335686|gb|AAD17382| (AF034975) R protein [Bacteriophage H-19B]
Length = 177
Score = 49.2 bits (115), Expect = 2e-05
Identities = 47/140 (33%), Positives = 65/140 (45%), Gaps = 17/140 (12%)
Query: 16 EGCKLNPYTCPGGVLTIGYGET---GKHVTPDMCLANEQ--EADAMLRARLAKEFEPAVR 70
EG Y G+ TI G GK V P M L+ E+ + +A+ R + E
Sbjct: 35 EGNHTTAYRDGTGIWTICRGAILVDGKPVVPGMKLSKEKCDQVNAIERDKALAWVE---- 90
Query: 71 RDVRVPLKQQQFDALVSLS-FNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGG--- 126
++++VPL Q + S +NIG G ST +R+NAGD GA E W GG
Sbjct: 91 KNIKVPLTDPQKAGIASFCPYNIGPGKCFPSTFYRRINAGDRRGACEAIRWWIKDGGRDC 150
Query: 127 RMQS----GLIIRRAAERAL 142
R++S G + RR E AL
Sbjct: 151 RIRSNNCYGQVSRRDQESAL 170
>gi|6759968|gb|AAF28126.1|AF153317_22 (AF153317) endolysin [Shigella
dysenteriae]
Length = 177
Score = 49.2 bits (115), Expect = 2e-05
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 16 EGCKLNPYTCPGGVLTIGYGET---GKHVTPDMCLANEQ--EADAMLRARLAKEFEPAVR 70
EG Y G+ TI G GK V P M L+ E+ +A+ R + E
Sbjct: 35 EGNHTTAYRDGAGIWTICRGAILVDGKPVVPGMKLSKEKCDRVNAIERDKALAWVE---- 90
Query: 71 RDVRVPLKQQQFDALVSLS-FNIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGGR 127
+++RVPL + Q + S +NIG ST ++LNAGD GA + W + GGR
Sbjct: 91 KNIRVPLTEPQKAGIASFCPYNIGPSKCFTSTFYRKLNAGDRKGACAEIRRWIYDGGR 148
>gi|974762|emb|CAA61013| (X87673) gp17 lysozyme [Bacteriophage P1]
>gi|4426958|gb|AAD20630.1| (AF125376) lysozyme lysA
[Bacteriophage P1]
Length = 185
Score = 44.1 bits (102), Expect = 7e-04
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 17/150 (11%)
Query: 6 EEGIALIKFFEGCKLNPYTCPGGVLTIGYGETGKHVTPDMCLANEQ-EADAMLRARLAKE 64
+ G+ LI EGC+ +PY CP GV T G G T VTP + ++Q AD +A
Sbjct: 32 QAGLELIGNAEGCRRDPYMCPAGVWTDGIGNT-HGVTPGVRKTDQQIAADWEKNILIA-- 88
Query: 65 FEPAVRRDVR-VPLKQQQFDALVSLSFNIGAGAFH-----------RSTLLKRLNAGDVA 112
E + + R + F A+ S +FN+G + +++ K G+
Sbjct: 89 -ERCINQHFRGKDMPDNAFSAMTSAAFNMGCNSLRTYYSKARGMRVETSIHKWAQKGEWV 147
Query: 113 GALEQFHVWKWAGGRMQSGLIIRRAAERAL 142
+ + G GL IRR ER L
Sbjct: 148 NMCNHLPDFVNSNGVPLRGLKIRREKERQL 177
>gi|76366|pir||S05335 lysis protein - Lactococcus phage Phi-vML3
Length = 187
Score = 41.4 bits (95), Expect = 0.005
Identities = 36/113 (31%), Positives = 51/113 (44%), Gaps = 8/113 (7%)
Query: 31 TIGYGETGKHVTPDMCLANEQEADAMLRARLAKEFEPAVRRDVRVPLKQQQFDALVSLSF 90
TIG+G G VT Q AD+ L + ++ P V V+ Q +FDALVSL++
Sbjct: 3 TIGWGHYG--VTAGTTWTQAQ-ADSQLEIDINNKYAPMVDAYVKGKANQNEFDALVSLAY 59
Query: 91 NIGAGAFHRSTLLKRLNAGDVAGALEQFHVWKWAGGRMQSGLIIRRAAERALF 143
N G + A ++ AGG++ GL+ RR AE LF
Sbjct: 60 NCG-----NVFVADGWAPFSHAYCASMIPKYRNAGGQVLQGLVRRRQAELNLF 107
>gi|1196687 (M14431) pre gene-16 ORF protein; putative
[Bacteriophage phi-29] >gi|224950|prf||1204208B ORF,gene
16 associated [Bacteriophage phi-29]
Length = 143
Score = 32.1 bits (71), Expect = 2.9
Identities = 14/27 (51%), Positives = 19/27 (69%)
Query: 117 QFHVWKWAGGRMQSGLIIRRAAERALF 143
+F W +GG++ GLI RRA E+ALF
Sbjct: 1 EFPKWNKSGGKVYQGLINRRAQEQALF 27
Database: nr
Posted date: Feb 13, 2000 1:18 AM
Number of letters in database: 140,124,617
Number of sequences in database: 455,460
Lambda K H
0.322 0.138 0.415
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44371357
Number of Sequences: 455460
Number of extensions: 1676042
Number of successful extensions: 3349
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3290
Number of HSP's gapped (non-prelim): 29
length of query: 164
length of database: 140,124,617
effective HSP length: 51
effective length of query: 113
effective length of database: 116,896,157
effective search space: 13209265741
effective search space used: 13209265741
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 67 (30.5 bits)