BLASTP 2.0.10 [Aug-26-1999]
Query= XF-06A08-GL15
(346 letters)
Database: nr
449,381 sequences; 138,416,789 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|2983560 (AE000722) GDP-D-mannose dehydratase [Aquifex aeolicus] 421 e-117
gi|4071212 (AF047478) GDP-mannose dehydratase; Gmd [Brucella me... 374 e-103
gi|2498416|sp|Q51366|GM4D_PSEAE GDP-MANNOSE 4,6-DEHYDRATASE (GD... 372 e-102
gi|3290168|gb|AAC38668.1| (AF062345) putative GDP-mannose-4,6-d... 371 e-102
gi|6580724|emb|CAB63300.1| (AJ251712) GDP-mannose-4,6-dehydrata... 361 6e-99
gi|2498418|sp|Q56872|GM4D_YEREN PROBABLE GDP-MANNOSE 4,6-DEHYDR... 360 1e-98
gi|3347913|gb|AAC27750.1| (AF072888) nodulation protein NoeL [S... 359 2e-98
gi|2498658|sp|P55354|NOEL_RHISN GDP-MANNOSE 4,6-DEHYDRATASE (GD... 358 3e-98
gi|5678716|gb|AAD46729.1|AF078736_3 (AF078736) GDP-D-mannose de... 355 3e-97
gi|3877766|emb|CAB04494.1| (Z81553) similar to PROBABLE GDP-MAN... 355 3e-97
gi|4504031|ref|NP_001491.1|| GDP-mannose 4,6-dehydratase; GDPMD... 352 3e-96
gi|2506907|sp|P32054|GM4D_ECOLI GDP-MANNOSE 4,6-DEHYDRATASE (GD... 349 2e-95
gi|6573398|pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase 349 2e-95
gi|5478239|gb|AAD43839.1|AF076290_9 (AF076290) putative GDP-D-m... 349 3e-95
gi|3435177 (AF061251) GDP-D-mannose dehydratase Gmd [Escherichi... 349 3e-95
gi|5824413|emb|CAA92455.2| (Z68215) similar to GDP-D-mannose de... 347 6e-95
gi|1131462|gb|AAC96486.1| (U42580) similar to Yersinia GDP-D-ma... 346 1e-94
gi|1651657|dbj|BAA16585| (D90899) GDP-D-mannose dehydratase [Sy... 343 1e-93
gi|4097914 (U72147) putative GDP-D-mannose dehydratase [Anabaen... 342 2e-93
gi|2738478 (AF004385) RfbDO22-1 [Vibrio cholerae] >gi|3721676|d... 341 4e-93
gi|6016140|sp|Q56598|GM4D_VIBCH PROBABLE GDP-MANNOSE 4,6-DEHYDR... 340 8e-93
gi|2621389 (AE000818) GDP-D-mannose dehydratase [Methanobacteri... 337 7e-92
gi|1002384 (U24571) rfbD-like gene; putative GDP-D-mannose dehy... 336 1e-91
gi|3258631 (AF040260) GDP-D-mannose-4,6-dehydratase [Homo sapiens] 336 1e-91
gi|280159|pir||S28470 rfbD protein - Vibrio cholerae >gi|48385|... 335 3e-91
gi|3550478|emb|CAA11575| (AJ223833) gsbA [Mycobacterium avium s... 331 6e-90
gi|3550473|emb|CAA11571| (AJ223832) gsbA [Mycobacterium avium s... 330 1e-89
gi|4416473|gb|AAD20373| (AF125999) GDP-D-mannose-dehydratase md... 330 1e-89
gi|1524258|emb|CAB02025| (Z79701) gmdA [Mycobacterium tuberculo... 328 6e-89
gi|1107926|emb|CAA62143| (X90547) GDP-D-mannose 4,6-dehydratase... 327 1e-88
gi|4154547 (AE001443) GDP-D-mannose dehydratase [Helicobacter p... 322 2e-87
gi|2313119|gb|AAD07112.1| (AE000526) GDP-D-mannose dehydratase ... 320 1e-86
gi|6319186|gb|AAF07199.1|AF195140_1 (AF195140) GDP-D-mannose 4,... 312 2e-84
gi|1764100 (U81805) GDP-D-mannose-4,6-dehydratase [Arabidopsis ... 309 2e-83
gi|1073345|pir||C55239 cpsB 5'-region hypothetical protein 1 - ... 303 2e-81
gi|6562268|emb|CAB62638.1| (AL132980) GDP-D-mannose-4, 6-dehydr... 303 2e-81
gi|1651998|dbj|BAA16924| (D90901) GDP-D-mannose dehydratase [Sy... 260 1e-68
gi|4321414|gb|AAD15751.1| (AF049343) GDP-mannose dehydratase [E... 221 8e-57
gi|2909577|emb|CAA17306| (AL021926) gca [Mycobacterium tubercul... 96 6e-19
gi|3249547 (AF009955) oxidoreductase Rmd [Pseudomonas aeruginosa] 88 1e-16
gi|6458415|gb|AAF10287.1|AE001927_6 (AE001927) UDP-glucose 4-ep... 82 7e-15
gi|4234783|gb|AAD12951.1| (AF078135) unknown [Leptospira borgpe... 79 5e-14
gi|4972096|emb|CAB43892.1| (AL078468) UDPglucose 4-epimerase-li... 76 4e-13
gi|5814300|gb|AAD52168.1|AF144879_7 (AF144879) unknown [Leptosp... 74 2e-12
gi|2650312 (AE001082) dTDP-glucose 4,6-dehydratase (rfbB) [Arch... 73 5e-12
gi|1710104|sp|P55295|RFBB_XANCA DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 72 8e-12
gi|3258173|dbj|BAA30856.1| (AP000007) 306aa long hypothetical U... 71 2e-11
gi|5457737|emb|CAB49227.1| (AJ248284) UDP-glucose 4-epimerase (... 71 2e-11
gi|1944159|dbj|BAA19633| (AB002668) dTDP-D-glucose-4,6-dehydrat... 69 5e-11
gi|4981021|gb|AAD35594.1|AE001727_6 (AE001727) UDP-glucose 4-ep... 68 1e-10
gi|5739472|gb|AAD50494.1|AF172324_12 (AF172324) WbnF [Escherich... 68 2e-10
gi|3132254|dbj|BAA28131| (AB010415) dTDP-D-glucose-4,6-dehydrat... 67 3e-10
gi|3135674 (AF064070) putative dTDP-D-glucose 4,6-dehydratase [... 67 3e-10
gi|5545317|dbj|BAA82532.1| (AB030032) dTDP-D-glucose 4,6-dehydr... 67 3e-10
gi|5458599|emb|CAB50087.1| (AJ248286) dTDP-glucose 4,6-dehydrat... 66 4e-10
gi|2129578|pir||S58282 dTDP-glucose 4-6-dehydratases homolog - ... 66 6e-10
gi|4679656|emb|CAB41308.1| (AL033517) GMDS (GDP-mannose 4,6-deh... 66 6e-10
gi|729026|sp|P39858|CAPI_STAAU CAPI PROTEIN >gi|506705 (U10927)... 65 8e-10
gi|1223961 (U29691) CDP-tyvelose epimerase [Yersinia pseudotube... 65 8e-10
gi|4539370|emb|CAB40064.1| (AL049525) UDP-galactose 4-epimerase... 65 1e-09
gi|3738279|gb|AAC63621.1| (AC005309) putative nucleotide-sugar ... 64 1e-09
gi|6706608|emb|CAB65990.1| (AL035693) dJ33B19.1 (GDP-D-mannose-... 64 1e-09
gi|6522623|emb|CAB62035.1| (AL133298) dTDP-glucose 4-6-dehydrat... 64 2e-09
gi|3513739 (AF080118) Similar to uridine diphosphate glucose ep... 64 2e-09
gi|585828|sp|P37761|RFBB_NEIGO DTDP-GLUCOSE 4,6-DEHYDRATASE >gi... 64 2e-09
gi|96686|pir||B33604 rfbE protein - Salmonella sp 63 4e-09
gi|1350580|sp|P14169|RFBE_SALTI CDP-TYVELOSE-2-EPIMERASE >gi|86... 63 4e-09
gi|3256817|dbj|BAA29500| (AP000002) 336aa long hypothetical dTD... 63 4e-09
gi|4539118|emb|CAB39839.1| (AL049491) putative dTDP-(glucose or... 62 5e-09
gi|4574160|gb|AAD23919.1|AF083467_3 (AF083467) dTDP-D-glucose 4... 62 7e-09
gi|2621713 (AE000844) UDP-glucose 4-epimerase [Methanobacterium... 62 9e-09
gi|418374|sp|P33119|GALE_CORDI UDP-GLUCOSE 4-EPIMERASE (GALACTO... 62 9e-09
gi|3033515|gb|AAC12869.1| (AF044332) dTDP-D-glucose-4,6-dehydra... 61 1e-08
gi|3927825|gb|AAC79582.1| (AC005727) putative nucleotide-sugar ... 61 2e-08
gi|1710103|sp|P55294|RFBB_NEIME DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 61 2e-08
gi|421103|pir||S30682 hypothetical protein o355 - Escherichia c... 60 3e-08
gi|2072420 (U75690) GDP-D-mannose dehydratase [Anabaena PCC7120] 60 3e-08
gi|2506450|sp|P27830|RFFG_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 60 3e-08
gi|2708270 (U78089) UDP-glucose epimerase [Brucella abortus] 60 3e-08
gi|2104387|emb|CAB08730| (Z95390) rmlB [Mycobacterium tuberculo... 60 3e-08
gi|2738953 (AF021920) GDP-D-mannose dehydratase homolog [Brucel... 60 3e-08
gi|6015647|emb|CAB57474.1| (Y18930) dTDP-glucose 4,6-dehydratas... 59 5e-08
gi|604222 (U09349) UDP-glucose 4-epimerase [Azospirillum brasil... 59 6e-08
gi|1730193|sp|P55180|GALE_BACSU UDP-GLUCOSE 4-EPIMERASE (GALACT... 59 6e-08
gi|1653034|dbj|BAA17951| (D90910) UDP-glucose 4-epimerase [Syne... 59 6e-08
gi|2116765|dbj|BAA20116| (D86418) YfnG [Bacillus subtilis] >gi|... 59 6e-08
gi|3832507 (AF097519) dTDP-D-glucose 4,6 dehydratase [Klebsiell... 59 8e-08
gi|1143204 (U34305) ORF2; Method: conceptual translation suppl... 58 1e-07
gi|1173555 (U31544) UDP-galactose-4-epimerase [Pisum sativum] 58 1e-07
gi|1230585 (U47057) nucleotide sugar epimerase [Vibrio cholerae... 58 1e-07
gi|1890603|emb|CAB01951| (Z79692) ExpA9 [Sinorhizobium meliloti] 58 1e-07
gi|3721693|dbj|BAA33643.1| (AB012957) probable nucleotide sugar... 58 1e-07
gi|2688351 (AE001149) nucleotide sugar epimerase [Borrelia burg... 57 2e-07
gi|4234803|gb|AAD12971.1| (AF078135) RmlB [Leptospira borgpeter... 57 2e-07
gi|1172921|sp|P44914|RFFG_HAEIN DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 57 2e-07
gi|1314581 (U51197) dTDP-D-glucose-4,6-dehydratase [Sphingomona... 57 2e-07
gi|6009798|dbj|BAA85072.1| (AB028135) ORF2S [Shigella sonnei] 57 2e-07
gi|6009649|dbj|BAA85007.1| (AB025970) ORF2P [Plesiomonas shigel... 57 2e-07
gi|2494660|sp|Q45291|GALE_BRELA UDP-GLUCOSE 4-EPIMERASE (GALACT... 57 3e-07
gi|1098478 (L09189) dTDP-D-glucose 4,6-dehydratase [Neisseria m... 57 3e-07
gi|2622920 (AE000933) dTDP-glucose 4,6-dehydratase [Methanobac... 57 3e-07
gi|2983750 (AE000735) nucleotide sugar epimerase [Aquifex aeoli... 57 3e-07
gi|6469141|emb|CAB61752.1| (AJ275318) dTDP-glucose 4-6-dehydrat... 57 3e-07
gi|3135690 (AF064070) putative UDP-glucose 4-epimerase [Burkhol... 56 4e-07
gi|2804685 (AF030359) dTDP-glucose-4,6-dehydratase [Streptococc... 56 4e-07
gi|2804691 (AF030360) dTDP-glucose-4,6-dehydratase [Streptococc... 56 4e-07
gi|4406251|gb|AAD19915.1| (AF105113) dTDP-glucose-4,6-dehydrata... 56 4e-07
gi|5104852|dbj|BAA80166.1| (AP000061) 330aa long hypothetical d... 56 4e-07
gi|1001273|dbj|BAA10518| (D64003) dTDP-glucose 4,6-dehydratase ... 56 4e-07
gi|2959983|emb|CAA10917.1| (AJ222661) UDP-glucuronic acid epime... 56 4e-07
gi|2105060|emb|CAB08849| (Z95436) rmlB2 [Mycobacterium tubercul... 56 5e-07
gi|2583123|gb|AAB82632.1| (AC002387) putative nucleotide sugar ... 56 5e-07
gi|1881546 (U09239) dTDP-glucose-4,6-dehydratase [Streptococcus... 55 7e-07
gi|3907612|gb|AAC78676.1| (AF094575) dTDP-glucose-4,6-dehydrata... 55 7e-07
gi|2326949 (U43540) rhamnose biosynthesis protein [Mycobacteriu... 55 7e-07
gi|4240415 (AF080235) NDP-hexose 4,6-dehydratase homolog [Strep... 55 7e-07
gi|1169830|sp|P13226|GALE_STRLI UDP-GLUCOSE 4-EPIMERASE (GALACT... 55 9e-07
gi|132499|sp|P26391|RFBB_SALTY DTDP-GLUCOSE 4,6-DEHYDRATASE >gi... 55 9e-07
gi|2983546 (AE000721) UDP-glucose-4-epimerase [Aquifex aeolicus] 55 9e-07
gi|1651976|dbj|BAA16902| (D90901) CDP-glucose 4,6-dehydratase [... 55 9e-07
gi|4981151|gb|AAD35714.1|AE001737_7 (AE001737) nucleotide sugar... 55 1e-06
gi|1944622|emb|CAB05932| (Z83335) dTDP-glucose 4,6-dehydratase ... 54 2e-06
gi|549563|sp|P35675|YGAE_ERWAM HYPOTHETICAL PROTEIN IN GALE 3'R... 54 2e-06
gi|6460562|gb|AAF12268.1|AE001862_94 (AE001862) thymidine dipho... 54 2e-06
gi|2494672|sp|P95780|RMLB_STRMU DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 54 2e-06
gi|1870164|emb|CAB05928| (Z83335) unknown [Streptococcus pneumo... 54 2e-06
gi|3061300|dbj|BAA25656| (AB005901) deduced dNDP-hexose 4,6-deh... 54 2e-06
gi|4741795|gb|AAD28704.1|AF101047_5 (AF101047) putative dTDP-D-... 54 2e-06
gi|1552867|emb|CAB02463| (Z80343) epiB [Mycobacterium tuberculo... 53 3e-06
gi|2650268 (AE001079) UDP-glucose 4-epimerase (galE-1) [Archaeo... 53 3e-06
gi|3193316 (AF069299) contains similarity to nucleotide sugar e... 53 4e-06
gi|2121111|pir||I55054 dTDP-D-glucose 4,6-dehydratase - Escheri... 53 4e-06
gi|2494668|sp|Q57664|GALE_METJA PUTATIVE UDP-GLUCOSE 4-EPIMERAS... 53 4e-06
gi|2506451|sp|P37759|RBB1_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 53 4e-06
gi|3093975 (AF059755) nucleotide sugar epimerase [Vibrio vulnif... 52 6e-06
gi|6707010|gb|AAF25549.1|AF109295_4 (AF109295) GalE [Staphyloco... 52 6e-06
gi|68391|pir||XUSMUG UDPglucose 4-epimerase (EC 5.1.3.2) - Stre... 52 8e-06
gi|1752648|emb|CAA71250| (Y10168) glucose epimerase [Bacillus t... 52 8e-06
gi|3087757|emb|CAA66078| (X97448) galE [Brucella melitensis] 52 8e-06
gi|5281036|emb|CAB45972.1| (AL080318) nucleotide sugar epimeras... 52 8e-06
gi|1666507 (U61226) RfbB [Leptospira interrogans] >gi|5814320|g... 52 1e-05
gi|6015668|emb|CAB57495.1| (Y18930) dTDP-glucose 4,6-dehydratas... 52 1e-05
gi|2506452|sp|P37777|RFBB_SHIFL DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 51 1e-05
gi|3608396 (AF071085) putative dTDP-glucose-4,6-dehydratase [En... 51 1e-05
gi|2146021|pir||S49054 dTDPglucose 4,6-dehydratase (EC 4.2.1.46... 51 2e-05
gi|4836876|gb|AAD30579.1|AC007260_10 (AC007260) Similar to dTDP... 51 2e-05
gi|3021355|emb|CAA06338.1| (AJ005081) UDP-galactose 4-epimerase... 50 2e-05
gi|5459017|emb|CAB50503.1| (AJ248288) UDP-glucose 4-epimerase (... 50 2e-05
gi|6598832|gb|AAF18687.1|AC010795_2 (AC010795) putative UDP-glu... 50 2e-05
gi|1653195|dbj|BAA18111| (D90911) dTDP-glucose 4-6-dehydratase ... 50 3e-05
gi|2558973 (AF025396) DdhB [Vibrio anguillarum] 50 3e-05
gi|3256770|dbj|BAA29453| (AP000002) 318aa long hypothetical UDP... 50 3e-05
gi|119687|sp|P26503|EXOB_RHIME UDP-GLUCOSE 4-EPIMERASE (GALACTO... 50 4e-05
gi|2494667|sp|Q57301|GALE_YEREN UDP-GLUCOSE 4-EPIMERASE (GALACT... 49 5e-05
gi|4995692|emb|CAB44218.1| (AJ011653) UDP-galactose 4-epimerase... 49 7e-05
gi|2921560|gb|AAC04827.1| (AF039306) UDP-glucose 4'-epimerase [... 49 7e-05
gi|132502|sp|P26397|RFBG_SALTY CDP-GLUCOSE 4,6-DEHYDRATASE >gi|... 48 9e-05
gi|4128133|emb|CAA06840| (AJ006068) dTDP-D-glucose 4,6-dehydrat... 48 9e-05
gi|2842588|sp|Q58455|YA55_METJA HYPOTHETICAL PROTEIN MJ1055 >gi... 48 1e-04
gi|1710031|sp|P55293|RBB2_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE >g... 48 1e-04
gi|4581414|emb|CAB40159.1| (AL031295) dJ886K2.3(GALE (UDP-galac... 48 1e-04
gi|2129759|pir||S62783 UDPglucose 4-epimerase (EC 5.1.3.2) - Ar... 48 1e-04
gi|1197641 (U46859) DdhB [Yersinia enterocolitica (type 0:8)] 47 2e-04
gi|2621436 (AE000823) UDP-glucose 4-epimerase related protein [... 47 2e-04
gi|4008544|emb|CAA22513| (AL034492) putative nucleotide-sugar d... 47 2e-04
gi|4234785|gb|AAD12953.1| (AF078135) unknown [Leptospira borgpe... 47 2e-04
gi|3874971|emb|CAB16861.1| (Z99709) similar to NAD dependant ep... 47 3e-04
gi|581659|emb|CAA50767| (X71970) rfbB [Shigella flexneri] 47 3e-04
gi|541221|pir||S41534 rfbB protein - Shigella flexneri 47 3e-04
gi|4503891|ref|NP_000394.1|| galactose-4-epimerase, UDP- >gi|24... 46 3e-04
gi|633875|bbs|154466 (S72887) CDP-D-glucose 4,6-dehydratase, Eo... 46 6e-04
gi|544367|sp|P35673|GALE_ERWAM UDP-GLUCOSE 4-EPIMERASE (GALACTO... 46 6e-04
gi|730819|sp|P39630|SPSJ_BACSU SPORE COAT POLYSACCHARIDE BIOSYN... 45 0.001
gi|609642 (L33181) CDP-D-glucose-4,6-dehydratase [Yersinia pseu... 45 0.001
gi|5921157|dbj|BAA84593.1| (AB032523) dTDP-glucose 4,6-dehydrat... 45 0.001
gi|421277|pir||D47070 CDP-glucose-4,6-dehydratase - Yersinia ps... 45 0.001
gi|120930|sp|P09609|GALX_KLULA GAL10 BIFUNCTIONAL PROTEIN [INCL... 44 0.002
gi|3451497|emb|CAA07653.1| (AJ007747) putative nucleotide sugar... 44 0.002
gi|6319493|ref|NP_009575.1|GAL10| UDP-glucose 4-epimerase; Gal1... 44 0.002
gi|3703056 (AF082008) UDP-galactose-4-epimerase [Lactococcus la... 43 0.004
gi|4206182 (U60828) UDP-galactose-4-epimerase [Lactococcus lactis] 43 0.004
gi|1330395 (U58761) coded for by C. elegans cDNA yk62h9.5; code... 43 0.004
gi|2621441 (AE000823) UDP-glucose 4-epimerase homolog [Methanob... 43 0.004
gi|5051487|emb|CAB44766.1| (AL078627) UDP glucose NAD dependant... 42 0.009
gi|2983012 (AE000684) ADP-L-glycero-D-manno-heptose-6-epimerase... 42 0.009
gi|120922|sp|P18645|GALE_RAT UDP-GLUCOSE 4-EPIMERASE (GALACTOWA... 41 0.011
gi|2494663|sp|Q59678|GALE_PASHA UDP-GLUCOSE 4-EPIMERASE (GALACT... 40 0.025
gi|2494670|sp|Q59745|EXOB_RHILT UDP-GLUCOSE 4-EPIMERASE (UDP-GA... 40 0.033
gi|2496715|sp|P55579|Y4NG_RHISN HYPOTHETICAL 42.8 KD PROTEIN Y4... 39 0.057
gi|1174963|sp|Q04973|VIPB_SALTI VI POLYSACCHARIDE BIOSYNTHESIS ... 39 0.075
gi|6090551|emb|CAB58730.1| (AL122032) putative cinnamoyl-coa re... 39 0.075
gi|462155|sp|Q05026|GALE_NEIGO UDP-GLUCOSE 4-EPIMERASE (GALACTO... 36 0.49
gi|1765995 (U76617) UDP-glucose- 4-epimerase [Pasteurella multo... 35 1.1
gi|98916|pir||S18542 hypothetical protein 4 - Streptomyces coel... 34 1.5
gi|2058311|emb|CAA56103| (X79566) cinnamoyl-CoA reductase [Euca... 34 2.5
gi|2058313|emb|CAA66063| (X97433) cinnamoyl-CoA reductase [Euca... 34 2.5
gi|2239260|emb|CAA74071| (Y13734) cinnamoyl CoA reductase [Zea ... 34 2.5
gi|3242328|emb|CAA66707| (X98083) cinnamoyl-CoA reductase [Zea ... 34 2.5
gi|3341511|emb|CAA13176.1| (AJ231134) cinnamoyl-CoA reductase [... 34 2.5
gi|4490303|emb|CAB38794.1| (AL035678) putative protein [Arabido... 34 2.5
gi|2127363|pir||I40869 ORF4 - Clostridium perfringens (fragment... 33 3.3
gi|5924379|gb|AAD56579.1|AF184272_1 (AF184272) dihydroflavonol ... 33 4.3
gi|6503293|gb|AAF14669.1|AC011713_17 (AC011713) Similar to gb|X... 33 4.3
gi|6587801|gb|AAF18492.1|AC010924_5 (AC010924) Strong similarit... 33 4.3
gi|100395|pir||S07463 dihydroflavonol-4-reductase (EC 1.-.-.-) ... 32 9.6
gi|1175764|sp|P45200|YDFG_HAEIN HYPOTHETICAL OXIDOREDUCTASE HI1... 32 9.6
>gi|2983560 (AE000722) GDP-D-mannose dehydratase [Aquifex aeolicus]
Length = 345
Score = 421 bits (1072), Expect = e-117
Identities = 199/339 (58%), Positives = 252/339 (73%), Gaps = 2/339 (0%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 60
M K A+ITGI GQDGAYLA+LLLE GY VYG RRS WR+ ELGI K+ +
Sbjct: 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKI--IH 58
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
DL + S+ +R +E P EVYNLAAQSFVGVSF+QP+ T ++ +G + +LEA+R V P
Sbjct: 59 MDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKP 118
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
+FYQASTSEMFGKVQ+ PQ E+TPFYPRSPY +AKL+ HW+TVNYRE+Y +FA SGIL
Sbjct: 119 DTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGIL 178
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FNHESPLR +FVTRKIT+++A IK G D L LGNL+AKRDWG+A EYV+ MW M+Q
Sbjct: 179 FNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP 238
Query: 241 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 300
EPD +V+AT T TVR+FV AA +EW G+ E G+D +GK +V ++ +F+RP
Sbjct: 239 EPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRP 298
Query: 301 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRR 339
AEVD+L+GNP KA KLGW+P+TT +EL +MMEAD++R
Sbjct: 299 AEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR 337
>gi|4071212 (AF047478) GDP-mannose dehydratase; Gmd [Brucella
melitensis]
Length = 362
Score = 374 bits (949), Expect = e-103
Identities = 187/345 (54%), Positives = 247/345 (71%), Gaps = 5/345 (1%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPK---LHLVE 60
K A+ITGITGQDGAYLA+LLL+ GY V+G RR+S N RI+ L H + L L
Sbjct: 3 KVALITGITGQDGAYLAELLLQKGYAVHGIKRRTSQFNTARIDHLYHDPHEQGVDLTLHH 62
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN- 119
DLTD SS VR+++L P EVYNL AQS V VSF++P T + +GA+ LLEAIRI+
Sbjct: 63 GDLTDTSSLVRIMQLVRPDEVYNLGAQSHVAVSFEEPEYTANSDALGALRLLEAIRILGM 122
Query: 120 -PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 178
+ R+YQASTSE++G VQ+ PQ E TPFYPRSPY AKLYA+W+TVNYRE+YGI+A +G
Sbjct: 123 EKQTRYYQASTSELYGLVQEIPQKETTPFYPRSPYAAAKLYAYWITVNYREAYGIYACNG 182
Query: 179 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 238
ILFNHESPLR FVTRKIT A+A IK+G + L LGNLD+ RDWG A++YV+ W MLQ
Sbjct: 183 ILFNHESPLRGETFVTRKITRALARIKIGNQNRLYLGNLDSLRDWGHARDYVEMQWLMLQ 242
Query: 239 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 298
D+P+ FV+AT + +VR+FV+LAA + I++ W+G E E G D +G +V ++P+++
Sbjct: 243 QDQPEDFVIATGKQYSVREFVTLAAKDIGIEMRWEGSGEAEKGYDAKTGACIVEVDPRYF 302
Query: 299 RPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
RPAEV+ L+G+ KA KLGW+PK + E L M+ D+ + R+
Sbjct: 303 RPAEVETLLGDATKAHQKLGWKPKISFETLVSEMIAEDLAAAARE 347
>gi|2498416|sp|Q51366|GM4D_PSEAE GDP-MANNOSE 4,6-DEHYDRATASE
(GDP-D-MANNOSE DEHYDRATASE) >gi|755218 (U18320) GCA
[Pseudomonas aeruginosa]
Length = 323
Score = 372 bits (945), Expect = e-102
Identities = 190/340 (55%), Positives = 242/340 (70%), Gaps = 19/340 (5%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
+SA++TGITGQDGAYLA+LLLE GY V+G R SS WR+ ELGI + + D+
Sbjct: 3 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI--EGDIQYEDGDM 60
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
D S R + A P+EVYNLAAQSFVG S++QP+TT + G+G +LLEAIR +P+ R
Sbjct: 61 ADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR 120
Query: 124 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 183
FYQASTSEMFG +Q Q E TPFYPRSPYG+ KLY HW+TVNYRE++G+ A+SGILFNH
Sbjct: 121 FYQASTSEMFGLIQAERQDENTPFYPRSPYGVVKLYGHWITVNYRENFGLHASSGILFNH 180
Query: 184 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 243
ESPLR +FVTRK+T A+A IKLGK L+LGN+D KRDWGF +YV+ MW MLQ D+ D
Sbjct: 181 ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDVKRDWGFGGDYVEAMWLMLQQDKAD 240
Query: 244 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 303
+V+AT T TVRD +A V G+D + + I+P F+RPAEV
Sbjct: 241 DYVVATVVTTTVRDMCQIAFEHV--------------GLDY---RDFLKIDPAFFRPAEV 283
Query: 304 DLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
D+L+GNPAKA+ LGW+P+T+L+EL MM+EAD+RR R+
Sbjct: 284 DVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVSRE 323
>gi|3290168|gb|AAC38668.1| (AF062345) putative
GDP-mannose-4,6-dehydratase; LpsA [Caulobacter
crescentus]
Length = 325
Score = 371 bits (942), Expect = e-102
Identities = 189/342 (55%), Positives = 241/342 (70%), Gaps = 21/342 (6%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFW--RINELGIAQHPKLHLVEY 61
K+A+ITG+TGQDGAYLA+LLLE GY V+G RRS+S + R+ +G+ + L
Sbjct: 3 KTALITGVTGQDGAYLAKLLLEKGYTVHGMLRRSASADVIGDRLRWIGVYDDIQFELG-- 60
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
DL D RL+ P EVYNLAAQSFVG S+DQP T +TG+G N+LEA+R+ P+
Sbjct: 61 DLLDEGGLARLMRRLQPDEVYNLAAQSFVGASWDQPHLTGSVTGLGTTNMLEAVRLECPQ 120
Query: 122 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
RFYQAS+SEM+G VQ Q E TPFYPRSPY +AKLYAHWMTVNYRES+G+ A++GILF
Sbjct: 121 ARFYQASSSEMYGLVQHPIQSETTPFYPRSPYAVAKLYAHWMTVNYRESFGLHASAGILF 180
Query: 182 NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 241
NHESPLR +FVTRK+T A+A IKLG+ + LGNLDAKRDWG AK+YV+ MW MLQ +
Sbjct: 181 NHESPLRGIEFVTRKVTDAVAAIKLGQQKTVDLGNLDAKRDWGHAKDYVEAMWLMLQQET 240
Query: 242 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 301
PD +V+AT +T TVR +A + V + + VTINPKF RPA
Sbjct: 241 PDDYVVATGKTWTVRQMCEVAFAHVGLNYQ-----------------DHVTINPKFLRPA 283
Query: 302 EVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
EVDLL+G+PAKA+ KLGWEPKTT++++ M++AD+ R R+
Sbjct: 284 EVDLLLGDPAKAKAKLGWEPKTTMQQMIAEMVDADIARRSRN 325
>gi|6580724|emb|CAB63300.1| (AJ251712) GDP-mannose-4,6-dehydratase
[Yersinia pseudotuberculosis]
Length = 373
Score = 361 bits (916), Expect = 6e-99
Identities = 183/354 (51%), Positives = 246/354 (68%), Gaps = 15/354 (4%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVE 60
K A+ITGITGQDG+YLA+ LLE GY V+G RR+SS N RI+ + +H P+ L
Sbjct: 3 KIALITGITGQDGSYLAEFLLEKGYEVHGIKRRASSFNTSRIDHIYQDRHETNPRFFLHY 62
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI--V 118
DLTD S+ +RL++ P E+YNL AQS V VSF+ P T D+ +G + LLEAIRI +
Sbjct: 63 GDLTDTSNLIRLVQEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRINGL 122
Query: 119 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 178
K RFYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+TVNYRESYG++A +G
Sbjct: 123 EKKTRFYQASTSELYGLVQETPQRETTPFYPRSPYAVAKMYAYWITVNYRESYGMYACNG 182
Query: 179 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 238
ILFNHESP R FVTRKIT A+A I LG L LGN+D+ RDWG AK+YV W MLQ
Sbjct: 183 ILFNHESPRRGETFVTRKITRAVANIALGLEKCLYLGNIDSLRDWGHAKDYVRMQWMMLQ 242
Query: 239 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------SGK 288
D+P+ FV+AT + TVR+FV ++A I+LE+ G+ E VA G
Sbjct: 243 QDKPEDFVIATGKQITVREFVRMSAREAGIELEFSGEGVEEVATVVAINGNHISSVNIGD 302
Query: 289 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 342
+V ++P+++RPAEV+ L+G+P KA+ LGW P+ T+EE+C M+ +D+ ++++
Sbjct: 303 VIVRVDPRYFRPAEVETLLGDPTKAKKVLGWVPEITVEEMCAEMVASDLEQAKQ 356
>gi|2498418|sp|Q56872|GM4D_YEREN PROBABLE GDP-MANNOSE
4,6-DEHYDRATASE (GDP-D-MANNOSE DEHYDRATASE) (ORF13.7)
>gi|1197652 (U46859) Gmd [Yersinia enterocolitica (type
0:8)]
Length = 372
Score = 360 bits (914), Expect = 1e-98
Identities = 182/354 (51%), Positives = 245/354 (68%), Gaps = 15/354 (4%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVE 60
K A+ITGITGQDG+YLA+ LLE GY V+G RRSSS N RI+ + H P L
Sbjct: 2 KKALITGITGQDGSYLAEFLLEKGYQVHGIKRRSSSFNTSRIDHIYQDPHEVNPHFFLHY 61
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI--V 118
DLTD S+ +RL++ P E+YNL AQS V VSF+ P T D+ +G + LLEA+RI +
Sbjct: 62 GDLTDTSNLIRLVKEIQPDEIYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAVRINGL 121
Query: 119 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 178
K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AK+YA+W+TVNYRESYG++A +G
Sbjct: 122 EHKTRFYQASTSELYGLVQEIPQRETTPFYPRSPYAVAKMYAYWITVNYRESYGMYACNG 181
Query: 179 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 238
ILFNHESP R + FVTRKIT AIA I LG D L LGN+D+ RDWG AK+YV W MLQ
Sbjct: 182 ILFNHESPRRPQTFVTRKITRAIANIALGLEDCLYLGNMDSLRDWGHAKDYVRMQWMMLQ 241
Query: 239 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQA----------ERECGVDVASGK 288
D+P+ FV+AT + TVR+FV ++A I++E+ G+ E G
Sbjct: 242 QDQPEDFVIATGKQITVREFVRMSAKEAGIEIEFSGKGIDEIATISAISDEYATSAKVGD 301
Query: 289 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 342
+V ++P+++RPAEV+ L+G+P+KA+ KLGW P+ T+EE+C M+ D++++++
Sbjct: 302 IIVRVDPRYFRPAEVETLLGDPSKAKKKLGWVPEITVEEMCAEMVAGDLQQAKQ 355
>gi|3347913|gb|AAC27750.1| (AF072888) nodulation protein NoeL
[Sinorhizobium fredii]
Length = 351
Score = 359 bits (911), Expect = 2e-98
Identities = 180/337 (53%), Positives = 238/337 (70%), Gaps = 6/337 (1%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 60
K A+I+G+TGQDGAYLA+LLL+ GY+V+G RRSSS N RI + +H + L
Sbjct: 5 KVALISGVTGQDGAYLAELLLDEGYIVHGIKRRSSSFNTQRIEHIYQERHDPEARFFLHY 64
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN- 119
D+TD ++ +R+++ P E+YNLAAQS V VSF+ P T + +G + +LEAIRI+
Sbjct: 65 GDMTDSTNLLRIVQQTQPHEIYNLAAQSHVQVSFETPEYTANADAIGTLRMLEAIRILGL 124
Query: 120 -PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 178
+ RFYQASTSE++G Q+ PQ E+TPFYPRSPY AKLYA+W+ VNYRE+YG+ A++G
Sbjct: 125 IHRTRFYQASTSELYGLAQEIPQNEKTPFYPRSPYAAAKLYAYWIVVNYREAYGMHASNG 184
Query: 179 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 238
ILFNHESPLR FVTRKIT A A I LGK +VL LGNLDA+RDWG A+EYV GMW M Q
Sbjct: 185 ILFNHESPLRGETFVTRKITRAAAAISLGKQEVLYLGNLDAQRDWGHAREYVRGMWMMCQ 244
Query: 239 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 298
D P +VLAT T +VR FV A + +EW G+ E G+D A+GK +V ++P+++
Sbjct: 245 QDRPGDYVLATGVTTSVRTFVEWAFEETGMTIEWVGEGIEERGIDAATGKCVVAVDPRYF 304
Query: 299 RPAEVDLLIGNPAKARTKLGWEPKTTLEEL-CHMMME 334
RP EVDLL+G+ KAR LGW +T++ +L C M+ E
Sbjct: 305 RPTEVDLLLGDATKARQVLGWRHETSVRDLACEMVRE 341
>gi|2498658|sp|P55354|NOEL_RHISN GDP-MANNOSE 4,6-DEHYDRATASE
(GDP-D-MANNOSE DEHYDRATASE) >gi|2182295 (AE000064) NoeL
[Rhizobium sp. NGR234]
Length = 351
Score = 358 bits (910), Expect = 3e-98
Identities = 179/337 (53%), Positives = 239/337 (70%), Gaps = 6/337 (1%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 60
K A+I+G+TGQDGAYLA+LLL+ GY+V+G RRSSS N RI + +H + L
Sbjct: 5 KVALISGVTGQDGAYLAELLLDEGYIVHGIKRRSSSFNTQRIEHIYQERHDPEARFFLHY 64
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN- 119
D+TD ++ +R+++ P E+YNLAAQS V VSF+ P T + +G + +LEAIRI+
Sbjct: 65 GDMTDSTNLLRIVQQTQPHEIYNLAAQSHVQVSFETPEYTANADAIGTLRMLEAIRILGL 124
Query: 120 -PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 178
+ RFYQASTSE++G Q++PQ E+TPFYPRSPY AKLYA+W+ VNYRE+YG+ A++G
Sbjct: 125 TNRTRFYQASTSELYGLAQESPQNEKTPFYPRSPYAAAKLYAYWIVVNYREAYGMHASNG 184
Query: 179 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 238
ILFNHESPLR FVTRKIT A A I LGK +VL LGNLDA+RDWG A+EYV GMW M Q
Sbjct: 185 ILFNHESPLRGETFVTRKITRAAAAISLGKQEVLYLGNLDAQRDWGHAREYVRGMWMMCQ 244
Query: 239 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 298
D P +VLAT T +VR FV A + +EW G+ E G+D A+G+ +V ++P+++
Sbjct: 245 QDRPGDYVLATGVTTSVRTFVEWAFEETGMTIEWVGEGIEERGIDAATGRCVVAVDPRYF 304
Query: 299 RPAEVDLLIGNPAKARTKLGWEPKTTLEEL-CHMMME 334
RP EVDLL+G+ KAR LGW +T++ +L C M+ E
Sbjct: 305 RPTEVDLLLGDATKARQVLGWRHETSVRDLACEMVRE 341
>gi|5678716|gb|AAD46729.1|AF078736_3 (AF078736) GDP-D-mannose
dehydratase [Escherichia coli]
Length = 372
Score = 355 bits (901), Expect = 3e-97
Identities = 183/356 (51%), Positives = 243/356 (67%), Gaps = 15/356 (4%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLV 59
NK A+ITGITGQDG+YLA+LLLE GY V+G RR+SS N R++ + H PKL L
Sbjct: 2 NKVALITGITGQDGSYLAELLLEKGYEVHGIKRRASSFNTERVDHIYQDSHLANPKLFLH 61
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
DLTD S+ R+L+ P EVYNL A S V VSF+ P T D+ +G + LLEAIRI+
Sbjct: 62 YGDLTDTSNLTRILKEVQPDEVYNLGAMSHVAVSFESPEYTADVDAIGTLRLLEAIRILG 121
Query: 120 --PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 177
K +FYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYG+FA +
Sbjct: 122 LEKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMFACN 181
Query: 178 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
GILFNHESP R FVTRKIT IA I G L LGN+D+ RDWG AK+YV W ML
Sbjct: 182 GILFNHESPRRGETFVTRKITRGIANIAQGLDKCLYLGNMDSLRDWGHAKDYVKMQWMML 241
Query: 238 QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------SG 287
Q + P+ FV+AT +VR+FV++AA V I+L ++G+ E GV V+ G
Sbjct: 242 QQETPEDFVIATGIQYSVREFVTMAAEQVGIELAFEGEGVNEKGVVVSVNGTDAKAVNPG 301
Query: 288 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
+++++P+++RPAEV+ L+G+P A KLGW P+ TL E+ M+ +D+ ++++
Sbjct: 302 DVIISVDPRYFRPAEVETLLGDPTNAHKKLGWSPEITLREMVKEMVSSDLAIAKKN 357
>gi|3877766|emb|CAB04494.1| (Z81553) similar to PROBABLE GDP-MANNOSE
4,6-DEHYDRATASE (EC 4.2.1.47) (GDP-D-MANNOSE
DEHYDRATASE) (FRAGMENT) [Caenorhabditis elegans]
Length = 382
Score = 355 bits (901), Expect = 3e-97
Identities = 184/349 (52%), Positives = 238/349 (67%), Gaps = 12/349 (3%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLH------ 57
K A+ITGITGQDG+YLA+LLL GY V+G RRSSS N RI L +P H
Sbjct: 34 KVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHL--YGNPVTHNGSASF 91
Query: 58 -LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
L D+TD S ++L+ P E+Y+LAAQS V VSFD P T ++ VG + LL+AI
Sbjct: 92 SLHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIH 151
Query: 117 I--VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIF 174
+ K+RFYQASTSE++GKVQ+ PQ E TPFYPRSPY +AK+Y +W+ VNYRE+Y +F
Sbjct: 152 ACRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMYGYWIVVNYREAYKMF 211
Query: 175 AASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMW 234
A +GILFNHESP R FVTRKIT ++A I L + + ++LGNL A RDWG AKEYV+ MW
Sbjct: 212 ACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNLSALRDWGHAKEYVEAMW 271
Query: 235 RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTIN 294
R+LQ D PD FV+AT + +VR+F +LA + + QL W+G+ E G + G V ++
Sbjct: 272 RILQQDTPDDFVIATGKQFSVREFCNLAFAEIGEQLVWEGEGVDEVGKN-QDGVVRVKVS 330
Query: 295 PKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
PK+YRP EV+ L+GNPAKAR LGWEPK T+ EL M+ +D+ E D
Sbjct: 331 PKYYRPTEVETLLGNPAKARKTLGWEPKITVPELVKEMVASDIALMEAD 379
>gi|4504031|ref|NP_001491.1|| GDP-mannose 4,6-dehydratase; GDPMD
>gi|3005057 (AF042377) GDP-mannose 4,6 dehydratase;
GDPMD [Homo sapiens]
Length = 372
Score = 352 bits (893), Expect = 3e-96
Identities = 178/341 (52%), Positives = 238/341 (69%), Gaps = 12/341 (3%)
Query: 6 AVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHL-----VE 60
A+ITGITGQDG+YLA+ LLE GY V+G RRSSS N RI L ++P+ H+ +
Sbjct: 26 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHL--YKNPQAHIEGNMKLH 83
Query: 61 Y-DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR--- 116
Y DLTD + V+++ P E+YNL AQS V +SFD T D+ GVG + LL+A++
Sbjct: 84 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 143
Query: 117 IVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
++N ++FYQASTSE++GKVQ+ PQ E TPFYPRSPYG AKLYA+W+ VN+RE+Y +FA
Sbjct: 144 LIN-SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 202
Query: 177 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
+GILFNHESP R +FVTRKI+ ++A I LG+L+ LGNLDAKRDWG AK+YV+ MW M
Sbjct: 203 NGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM 262
Query: 237 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 296
LQ DEP+ FV+AT +VR+FV + + + W+G+ E E G +GK VT++ K
Sbjct: 263 LQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLK 322
Query: 297 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 337
+YRP EVD L G+ KA+ KL W+P+ +EL M+ ADV
Sbjct: 323 YYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV 363
>gi|2506907|sp|P32054|GM4D_ECOLI GDP-MANNOSE 4,6-DEHYDRATASE
(GDP-D-MANNOSE DEHYDRATASE) >gi|1407612 (U38473)
GDP-D-mannose dehydratase [Escherichia coli]
>gi|1736759|dbj|BAA15909| (D90843) dTDP-glucose
4,6-dehydratase (EC 4.2.1.46). [Escherichia coli]
>gi|1788366 (AE000295) GDP-D-mannose dehydratase
[Escherichia coli]
Length = 373
Score = 349 bits (887), Expect = 2e-95
Identities = 178/355 (50%), Positives = 238/355 (66%), Gaps = 15/355 (4%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLV 59
+K A+ITG+TGQDG+YLA+ LLE GY V+G RR+SS N R++ + H PK HL
Sbjct: 2 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 61
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
DL+D S+ R+L P EVYNL A S V VSF+ P T D+ +G + LLEAIR +
Sbjct: 62 YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 121
Query: 120 --PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 177
K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYG++A +
Sbjct: 122 LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACN 181
Query: 178 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
GILFNHESP R FVTRKIT AIA I G L LGN+D+ RDWG AK+YV W ML
Sbjct: 182 GILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 241
Query: 238 QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV----------DVASG 287
Q ++P+ FV+AT +VR FV +AA+ + I+L ++G E G+ V G
Sbjct: 242 QQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPG 301
Query: 288 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 342
++ ++P+++RPAEV+ L+G+P KA KLGW+P+ TL E+ M+ D+ +++
Sbjct: 302 DVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKK 356
>gi|6573398|pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase
Length = 372
Score = 349 bits (887), Expect = 2e-95
Identities = 178/355 (50%), Positives = 238/355 (66%), Gaps = 15/355 (4%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLV 59
+K A+ITG+TGQDG+YLA+ LLE GY V+G RR+SS N R++ + H PK HL
Sbjct: 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
DL+D S+ R+L P EVYNL A S V VSF+ P T D+ +G + LLEAIR +
Sbjct: 61 YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 120
Query: 120 --PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 177
K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYG++A +
Sbjct: 121 LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACN 180
Query: 178 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
GILFNHESP R FVTRKIT AIA I G L LGN+D+ RDWG AK+YV W ML
Sbjct: 181 GILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240
Query: 238 QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV----------DVASG 287
Q ++P+ FV+AT +VR FV +AA+ + I+L ++G E G+ V G
Sbjct: 241 QQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPG 300
Query: 288 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 342
++ ++P+++RPAEV+ L+G+P KA KLGW+P+ TL E+ M+ D+ +++
Sbjct: 301 DVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKK 355
>gi|5478239|gb|AAD43839.1|AF076290_9 (AF076290) putative
GDP-D-mannose dehydratase [Brucella melitensis]
Length = 356
Score = 349 bits (885), Expect = 3e-95
Identities = 178/348 (51%), Positives = 237/348 (67%), Gaps = 5/348 (1%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLH 57
M +K+A+I G+TGQDGAYL++LLL GY V+G RRSSS N RI+ L H +
Sbjct: 1 MQDKTALIVGVTGQDGAYLSELLLGKGYRVHGLKRRSSSFNTARIDHLYQDPHEEDIRFR 60
Query: 58 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
L DLTD ++ R+++ P E+YNL AQS V VSF+ P T + +G + LLE++RI
Sbjct: 61 LHFGDLTDATNLCRVIQEVQPDEIYNLGAQSHVQVSFETPEYTANADALGTLRLLESMRI 120
Query: 118 VN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFA 175
+ RFYQASTSE+FG Q E+TPF PRSPY AKLYA+W TVNYR++YG A
Sbjct: 121 LGLGKSCRFYQASTSELFGNSSHHAQNEQTPFAPRSPYATAKLYAYWTTVNYRDAYGFHA 180
Query: 176 ASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 235
++GILFNHESPLR FVTRKIT A+A I+ G D L+LGNL+A+RDWG A++YV+GMWR
Sbjct: 181 SNGILFNHESPLRGETFVTRKITRAVAAIERGLQDRLRLGNLEARRDWGHARDYVEGMWR 240
Query: 236 MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 295
+LQ D PD +VLAT T TVR+F+ A AVD Q+ W G E G+D +G L+ I+P
Sbjct: 241 ILQEDTPDDYVLATGETHTVREFIEHAFKAVDKQIVWHGDGVDELGIDRKTGNCLIEIDP 300
Query: 296 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
+++RP EVD L+G+ +KA+ +LGW+ T E L M++ D+R R+
Sbjct: 301 RYFRPNEVDFLMGDASKAKDRLGWQHTTGFENLVAEMVDWDLRNIMRE 348
>gi|3435177 (AF061251) GDP-D-mannose dehydratase Gmd [Escherichia
coli] >gi|4867921|dbj|BAA77730.1| (AB008676) GDP-mannose
4,6-dehydratase [Escherichia coli]
Length = 372
Score = 349 bits (885), Expect = 3e-95
Identities = 179/354 (50%), Positives = 237/354 (66%), Gaps = 15/354 (4%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVE 60
K A+ITG+TGQDG+YLA+ LL+ GY V+G RR+SS N RI+ + H P HL
Sbjct: 3 KVALITGVTGQDGSYLAEFLLDKGYEVHGIKRRASSFNTERIDHIYQDPHGSNPNFHLHY 62
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN- 119
DLTD S+ R+L+ P EVYNLAA S V VSF+ P T D+ +G + LLEAIR +
Sbjct: 63 GDLTDSSNLTRILKEVQPDEVYNLAAMSHVAVSFESPEYTADVDAIGTLRLLEAIRFLGL 122
Query: 120 -PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 178
K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYGI+A +G
Sbjct: 123 ENKTRFYQASTSELYGLVQEIPQKESTPFYPRSPYAVAKLYAYWITVNYRESYGIYACNG 182
Query: 179 ILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 238
ILFNHESP R FVTRKIT +A I G L LGN+D+ RDWG AK+YV W MLQ
Sbjct: 183 ILFNHESPRRGETFVTRKITRGLANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQWLMLQ 242
Query: 239 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV----------DVASGK 288
++P+ FV+AT +VR FV +AA+ + I++ + G+ E G+ V G
Sbjct: 243 QEQPEDFVIATGVQYSVRQFVEMAAAQLGIKMSFVGKGIEEKGIVDSVEGQDAPGVKPGD 302
Query: 289 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 342
+V ++P+++RPAEVD L+G+P+KA KLGW P+ TL E+ M+ D+ +++
Sbjct: 303 VIVAVDPRYFRPAEVDTLLGDPSKANLKLGWRPEITLAEMISEMVAKDLEAAKK 356
>gi|5824413|emb|CAA92455.2| (Z68215) similar to GDP-D-mannose
dehydratase; cDNA EST EMBL:C11174 comes from this gene;
cDNA EST yk561a7.3 comes from this gene [Caenorhabditis
elegans]
Length = 368
Score = 347 bits (882), Expect = 6e-95
Identities = 177/341 (51%), Positives = 234/341 (67%), Gaps = 8/341 (2%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL---GIAQH--PKLHL 58
K A+ITGI+GQDG+YLA+LLL GY V+G RRSSS N RI L I H L
Sbjct: 20 KVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSL 79
Query: 59 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI- 117
D+TD S ++L+ P EVY+LAAQS V VSFD P T ++ VG + LL+AI
Sbjct: 80 HYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHAC 139
Query: 118 -VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
+ K+RFYQASTSE++GKVQ+ PQ E+TPFYPRSPY +AK+Y +W+ VNYRE+Y +FA
Sbjct: 140 RLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREAYNMFAC 199
Query: 177 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
+GILFNHESP R FVTRKIT ++A I LG+ + ++LGNL A RDWG A+EYV+ MWR+
Sbjct: 200 NGILFNHESPRRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMWRI 259
Query: 237 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 296
LQ D PD FV+AT + +VR+F +LA + + L+W+G+ E G + G V ++PK
Sbjct: 260 LQHDSPDDFVIATGKQFSVREFCNLAFAEIGEVLQWEGEGVEEVGKN-KDGVIRVKVSPK 318
Query: 297 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 337
+YRP EV+ L+GN KA+ LGWE K T+ EL M+ +D+
Sbjct: 319 YYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDI 359
>gi|1131462|gb|AAC96486.1| (U42580) similar to Yersinia
GDP-D-mannose dehydratase, corresponds to GenBank
Accession Number U46859 [Paramecium bursaria Chlorella
virus 1]
Length = 345
Score = 346 bits (879), Expect = 1e-94
Identities = 174/344 (50%), Positives = 233/344 (67%), Gaps = 12/344 (3%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 60
M +K A++TG TGQDG YL L++ GY VYG R +SS N R+ EL + + +V
Sbjct: 1 MLSKVALVTGATGQDGTYLCPFLVKKGYTVYGLVRHTSSENP-RVEEL---KSQGVEIVH 56
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
DLTD +S + ++ P E+YN+AAQSFVG SF Q T ++ +G + LL+A+RI
Sbjct: 57 GDLTDSASLINIITKIRPDEIYNMAAQSFVGDSFHQAEVTANVDALGVLRLLDAVRIAGL 116
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
R QASTSE++GKVQ+ PQ E TPFYPRSPYG+AKLYA+W+ NYRESYG+F + I
Sbjct: 117 NSRICQASTSELYGKVQEIPQTERTPFYPRSPYGVAKLYAYWICKNYRESYGMFVCNSIC 176
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FNHESP R FVTRKIT A+A I G + LGN+D+KRDWG+A++Y++ MW MLQ D
Sbjct: 177 FNHESPNRGHQFVTRKITKAVANIFNGVEKCMYLGNIDSKRDWGYAEDYIEAMWLMLQQD 236
Query: 241 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVAS--------GKTLVT 292
PD +V+AT +T +VR+FV +A +DI +E+ G+ E E V+S G ++
Sbjct: 237 TPDDYVIATGQTTSVREFVKIAFGVLDIVVEFSGENENEIAYVVSSPEASHVKVGDVVMR 296
Query: 293 INPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEAD 336
+N FYRPAEVDLL+G+ KA++ LGWEPKTTL EL MM+ +D
Sbjct: 297 VNKDFYRPAEVDLLVGDATKAKSVLGWEPKTTLNELVKMMVISD 340
>gi|1651657|dbj|BAA16585| (D90899) GDP-D-mannose dehydratase
[Synechocystis sp.]
Length = 362
Score = 343 bits (871), Expect = 1e-93
Identities = 180/342 (52%), Positives = 227/342 (65%), Gaps = 24/342 (7%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLV 59
+K ++TGITGQDG+YL++LLLE GY V+G RR+S+ N RI+ L + H KL L
Sbjct: 4 SKVVLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRLH 63
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
DLTD ++ R+LE P E+YNL AQS V VSFD P T D +G + LLEAIR
Sbjct: 64 YGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAIRDYQ 123
Query: 120 PK----IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFA 175
+ +RFYQA +SEMFGKVQ+ PQ E TPFYPRSPY AK+Y HW TVNYRESY +FA
Sbjct: 124 HRTGIQVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYGHWQTVNYRESYDLFA 183
Query: 176 ASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 235
+GILFNHESP R FVTRKIT AIA I G L LGN+D+KRDWG+AK+YV MW
Sbjct: 184 CNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNIDSKRDWGYAKDYVRAMWA 243
Query: 236 MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 295
MLQ ++PD +V+AT T V++F+ +A V+ L W + V +
Sbjct: 244 MLQQEQPDDYVVATGETHEVKEFLEIAFGYVN--LNW---------------QNYVAFDE 286
Query: 296 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 337
++ RPAEVDLLIG+PAK + +LGWEP T EL H+M+EAD+
Sbjct: 287 RYLRPAEVDLLIGDPAKTKAQLGWEPSVTFTELVHLMVEADL 328
>gi|4097914 (U72147) putative GDP-D-mannose dehydratase [Anabaena
sp. CA]
Length = 359
Score = 342 bits (869), Expect = 2e-93
Identities = 181/343 (52%), Positives = 229/343 (65%), Gaps = 24/343 (6%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLV 59
+K A+ITGITGQDG+YL++ LL GY V+G RR+S+ N RI+ + H +L L
Sbjct: 4 HKRALITGITGQDGSYLSEFLLGQGYEVHGIIRRTSTFNTDRIDHIYEDPHKEGVRLFLH 63
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
DLTD ++ R+LE P E+YNL AQS V VSFD P T D G+G + LLEAIR
Sbjct: 64 YGDLTDGTTLRRILEEVQPTEIYNLGAQSHVRVSFDSPEYTVDSVGMGTLRLLEAIRDYQ 123
Query: 120 PK----IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFA 175
+ +RFYQA +SEM+G VQ PQ E TPFYPRSPY AK+YAHW TVNYRESYG+FA
Sbjct: 124 HRTGIQVRFYQAGSSEMYGLVQAVPQSETTPFYPRSPYACAKVYAHWQTVNYRESYGLFA 183
Query: 176 ASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 235
+GILFNHESP R FVTRKIT A+A I GK L +GNLDAKRDWG+AK+YV MW
Sbjct: 184 CNGILFNHESPRRGETFVTRKITRAVARIVAGKQKTLYMGNLDAKRDWGYAKDYVRAMWL 243
Query: 236 MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 295
MLQ D+PD +V+AT T +VR+F+ LA S V+ L+W+ E +
Sbjct: 244 MLQQDQPDDYVIATGETHSVREFLELAFSHVN--LDWQDYVE---------------FDE 286
Query: 296 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVR 338
++ RPAEVDLLIG+ KA+ KLGW P T +EL +M++AD++
Sbjct: 287 RYLRPAEVDLLIGDSTKAQQKLGWRPSVTFKELVALMVDADLQ 329
>gi|2738478 (AF004385) RfbDO22-1 [Vibrio cholerae]
>gi|3721676|dbj|BAA33626.1| (AB012957) probable
O-antigen synthesis oxidoreductase [Vibrio cholerae]
Length = 372
Score = 341 bits (866), Expect = 4e-93
Identities = 175/356 (49%), Positives = 239/356 (66%), Gaps = 19/356 (5%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY-- 61
K A+ITG+TGQDG+YLA+ LL GY V+G RR+SS N R++ I Q P + +
Sbjct: 3 KKALITGVTGQDGSYLAEFLLAKGYEVHGIKRRASSFNTQRVDH--IYQDPHVDNASFIL 60
Query: 62 ---DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 118
DLTD S+ R+L+ P EVYNL AQS V VSF+ P T D+ +G + LLEAIR++
Sbjct: 61 HYGDLTDSSNLTRILQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRLL 120
Query: 119 NPK--IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
+ +FYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+ VNYRESYG++A
Sbjct: 121 GLEKTTKFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKMYAYWIVVNYRESYGMYAC 180
Query: 177 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
+GILFNHESP R FVTRKIT +A I G L +GN+DA RDWG AK+YV W M
Sbjct: 181 NGILFNHESPRRGETFVTRKITRGLANIAQGLEKCLYMGNMDALRDWGHAKDYVRMQWMM 240
Query: 237 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------S 286
LQ D+P+ FV+AT +VR F+ +A + + L ++GQ E G+ A
Sbjct: 241 LQQDQPEDFVIATGVQYSVRQFIEWSAKELGVTLTFEGQGVDEKGIVSAIEGDKAPALKV 300
Query: 287 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 342
G +V I+P+++RPAEV+ L+G+P+KA+ KLGW P+ T++E+C MM D++ ++R
Sbjct: 301 GDVVVQIDPRYFRPAEVETLLGDPSKAKQKLGWTPEITVQEMCAEMMMEDLKVAQR 356
>gi|6016140|sp|Q56598|GM4D_VIBCH PROBABLE GDP-MANNOSE
4,6-DEHYDRATASE (GDP-D-MANNOSE DEHYDRATASE)
>gi|2244681|emb|CAA69111| (Y07786) oxidoreductase
[Vibrio cholerae] >gi|3724306|dbj|BAA33595.1| (AB012956)
probable GDP-D-mannose dehydratase [Vibrio cholerae]
Length = 372
Score = 340 bits (864), Expect = 8e-93
Identities = 174/356 (48%), Positives = 239/356 (66%), Gaps = 19/356 (5%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY-- 61
K A+ITG+TGQDG+YLA+ LL GY V+G RR+SS N R++ I Q P + +
Sbjct: 3 KKALITGVTGQDGSYLAEFLLAKGYEVHGIKRRASSFNTQRVDH--IYQDPHVDNASFIL 60
Query: 62 ---DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 118
DLTD S+ R+L+ P EVYNL AQS V VSF+ P T D+ +G + LLEAIR++
Sbjct: 61 HYGDLTDSSNLTRILQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRLL 120
Query: 119 NPK--IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
+ +FYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+ VNYRESYG++A
Sbjct: 121 GLEKTTKFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKMYAYWIVVNYRESYGMYAC 180
Query: 177 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
+GILFNHESP R FVTRKIT +A I G L +GN+DA RDWG AK+YV W M
Sbjct: 181 NGILFNHESPRRGETFVTRKITRGLANIAQGLEKCLYMGNMDALRDWGHAKDYVRMQWMM 240
Query: 237 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------S 286
LQ D+P+ FV+AT +VR F+ +A + + L ++GQ E G+ A
Sbjct: 241 LQQDQPEDFVIATGVQYSVRQFIEWSAKELGVTLTFEGQGVDEKGIVTAIEGDKAPALKV 300
Query: 287 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 342
G +V I+P+++RPAEV+ L+G+P+KA+ KLGW P+ T++E+C M+ D++ ++R
Sbjct: 301 GDVVVQIDPRYFRPAEVETLLGDPSKAKQKLGWTPEITVQEMCAEMVMEDLKVAQR 356
>gi|2621389 (AE000818) GDP-D-mannose dehydratase [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 337 bits (856), Expect = 7e-92
Identities = 180/339 (53%), Positives = 227/339 (66%), Gaps = 19/339 (5%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
KSA+ITGITGQDGAYLA+ LLE GY VYG YRR S+ NFWR+ L I +++LV DL
Sbjct: 2 KSALITGITGQDGAYLAKFLLEKGYEVYGIYRRLSTPNFWRLQYLEIFD--RINLVPADL 59
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
TD S + L+++ EVY+LAAQSFVG SF+QP +T +TGV ++LEAIR NP IR
Sbjct: 60 TDEFSLLESLKISDADEVYHLAAQSFVGTSFEQPTSTAHVTGVAVTSMLEAIRHYNPHIR 119
Query: 124 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 183
FYQAS+SE++G T E +PF P SPY AKLY +WMT YRE Y IFA +GILFNH
Sbjct: 120 FYQASSSEIYGDGHTTILNENSPFKPSSPYAAAKLYGYWMTRIYREGYDIFACNGILFNH 179
Query: 184 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 243
ESPLR +FVTRKI++ A I LG D L LGNLDAKRDWG+A +YV+ M MLQ EPD
Sbjct: 180 ESPLRGLEFVTRKISNTAAKIALGLEDELLLGNLDAKRDWGYAPDYVEAMHMMLQHKEPD 239
Query: 244 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 303
FV+AT T TVR+F S ++ L+W + V ++ +F+RP +V
Sbjct: 240 DFVIATAETHTVREFCE--KSFEELGLDW---------------QDYVKVDKRFFRPLDV 282
Query: 304 DLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSER 342
+ L G+ +KAR LGW+PKT EEL +M+ D+ R ER
Sbjct: 283 NYLCGDYSKARENLGWQPKTKFEELVKIMVREDLERWER 321
>gi|1002384 (U24571) rfbD-like gene; putative GDP-D-mannose
dehydratase; similar to the GDP-D-mannose dehydratase
from E. coli, Swiss-Prot Accession Number P32054, and
the RfbD protein from Vibrio cholerae O1, PIR Accession
Number S28470 [Vibrio cholerae]
Length = 348
Score = 336 bits (853), Expect = 1e-91
Identities = 172/347 (49%), Positives = 233/347 (66%), Gaps = 19/347 (5%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY-- 61
K A+ITG+TGQDG+YLA+ LL GY V+G RR+SS N R++ I Q P + +
Sbjct: 3 KKALITGVTGQDGSYLAEFLLAKGYEVHGIKRRASSFNTQRVDH--IYQDPHVDNASFIL 60
Query: 62 ---DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 118
DLTD S+ R+L+ P EVYNL AQS V VSF+ P T D+ +G + LLEAIR++
Sbjct: 61 HYGDLTDSSNLTRILQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRLL 120
Query: 119 NPK--IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
+ +FYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+ VNYRESYG++A
Sbjct: 121 GLEKTTKFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKMYAYWIVVNYRESYGMYAC 180
Query: 177 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
+GILFNHESP R FVTRKIT +A I G L +GN+DA RDWG AK+YV W M
Sbjct: 181 NGILFNHESPRRGETFVTRKITRGLANIAQGLEKCLYMGNMDALRDWGHAKDYVRMQWMM 240
Query: 237 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------S 286
LQ D+P+ FV+AT +VR F+ +A + + L ++GQ E G+ A
Sbjct: 241 LQQDQPEDFVIATGVQYSVRQFIEWSAKELGVTLTFEGQGVDEKGIVTAIEGDKAPALKV 300
Query: 287 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMM 333
G +V I+P+++RPAEV+ L+G+P+KA+ KLGW P+ T++E+C M+
Sbjct: 301 GDVVVQIDPRYFRPAEVETLLGDPSKAKQKLGWTPEITVQEMCAEMV 347
>gi|3258631 (AF040260) GDP-D-mannose-4,6-dehydratase [Homo sapiens]
Length = 339
Score = 336 bits (853), Expect = 1e-91
Identities = 170/332 (51%), Positives = 229/332 (68%), Gaps = 12/332 (3%)
Query: 15 DGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHL-----VEY-DLTDLSS 68
DG+YLA+ LLE GY V+G RRSSS N RI L ++P+ H+ + Y DLTD +
Sbjct: 2 DGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHL--YKNPQAHIEGNMKLHYGDLTDSTC 59
Query: 69 SVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR---IVNPKIRFY 125
V+++ P E+YNL AQS V +SFD T D+ GVG + LL+A++ ++N ++FY
Sbjct: 60 LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLIN-SVKFY 118
Query: 126 QASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHES 185
QASTSE++GKVQ+ PQ E TPFYPRSPYG AKLYA+W+ VN+RE+Y +FA +GILFNHES
Sbjct: 119 QASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHES 178
Query: 186 PLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPDTF 245
P R +FVTRKI+ ++A I LG+L+ LGNLDAKRDWG AK+YV+ MW MLQ DEP+ F
Sbjct: 179 PRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDF 238
Query: 246 VLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEVDL 305
V+AT +VR+FV + + + W+G+ E E G +GK VT++ K+YRP EVD
Sbjct: 239 VIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDF 298
Query: 306 LIGNPAKARTKLGWEPKTTLEELCHMMMEADV 337
L G+ KA+ KL W+P+ +EL M+ ADV
Sbjct: 299 LQGDCTKAKQKLNWKPRVAFDELVREMVHADV 330
>gi|280159|pir||S28470 rfbD protein - Vibrio cholerae
>gi|48385|emb|CAA42136| (X59554) oxidoreductase?,has
homology to Salmonella typhimurium RfbB [Vibrio
cholerae] >gi|1586119|prf||2203285C rfbD gene [Vibrio
cholerae]
Length = 373
Score = 335 bits (851), Expect = 3e-91
Identities = 177/358 (49%), Positives = 235/358 (65%), Gaps = 19/358 (5%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP-----K 55
M K A+ITGITGQDG+YLA+ LLE GY V+G RRSS N R++ L H K
Sbjct: 1 MNKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFK 60
Query: 56 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
LH DLTD S+ R+L P EVYNL AQS V VSF P T D+ +G + LLEAI
Sbjct: 61 LHYG--DLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAI 118
Query: 116 RIVN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
R + K +FYQASTSE++G VQ+ PQ E TPFYPRSPY +AK+YA+W+T+NYRESYGI
Sbjct: 119 RFLGLTKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGI 178
Query: 174 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGM 233
+A +GILFNHESP R FVTRKIT +A I G L +GNLDA RDWG AK+YV
Sbjct: 179 YACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQ 238
Query: 234 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV----------D 283
W MLQ DEP FV+AT +VR+F+ ++A + I+LE+ G+ E V
Sbjct: 239 WMMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPA 298
Query: 284 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSE 341
+ G +V ++P ++RPAEV+ L+G+P+ A+ +LGW P+ TL+++ M+ +D+ +++
Sbjct: 299 IKVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEITLQQMVSEMVASDLEQAQ 356
>gi|3550478|emb|CAA11575| (AJ223833) gsbA [Mycobacterium avium
subsp. paratuberculosis]
Length = 343
Score = 331 bits (839), Expect = 6e-90
Identities = 178/343 (51%), Positives = 224/343 (64%), Gaps = 21/343 (6%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 60
K A+ITGITGQDG+YLA+LLL GY V+G RR+S+ N RI+ L + H +L L
Sbjct: 2 KRALITGITGQDGSYLAELLLSKGYEVHGLVRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
DLTD + V LL P EVYNLAAQS V VSFD+P+ T D TG+G++ LLEA+R+
Sbjct: 62 ADLTDGTRLVTLLSSIDPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSIRLLEAVRLSRV 121
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
RFYQAS+SEMFG PQ E TPFYPRSPYG AK++++W T NYRE+YG+FA +GIL
Sbjct: 122 DCRFYQASSSEMFG-ASPPPQNESTPFYPRSPYGAAKVFSYWTTRNYREAYGLFAVNGIL 180
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FNHESP R FVTRKIT A+A I+ G + +GNLDA RDWG+A EYV+GMWRMLQA
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIRAGVQSEVYMGNLDAIRDWGYAPEYVEGMWRMLQAP 240
Query: 241 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 300
EPD +VLAT R TVR+F A V L+W+ V + ++ RP
Sbjct: 241 EPDDYVLATGRGYTVREFAQAAFDHVG--LDWQKH---------------VKFDDRYLRP 283
Query: 301 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
EVD L+G+ +A LGW+ EL +M++AD+ SE D
Sbjct: 284 TEVDSLVGDADRAAQSLGWKASVHTGELARIMVDADIAASECD 326
>gi|3550473|emb|CAA11571| (AJ223832) gsbA [Mycobacterium avium
subsp. silvaticum]
Length = 343
Score = 330 bits (837), Expect = 1e-89
Identities = 178/343 (51%), Positives = 224/343 (64%), Gaps = 21/343 (6%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 60
K A+ITGITGQDG+YLA+LLL GY V+G RR+S+ N RI+ L + H +L L
Sbjct: 2 KRALITGITGQDGSYLAELLLSKGYEVHGLVRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
DLTD + V LL P EVYNLAAQS V VSFD+P+ T D TG+G++ LLEA+R+
Sbjct: 62 ADLTDGTRLVTLLSSIDPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSIRLLEAVRLSRV 121
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
RFYQAS+SEMFG PQ E TPFYPRSPYG AK++++W T NYRE+YG+FA +GIL
Sbjct: 122 DCRFYQASSSEMFG-ASPPPQNESTPFYPRSPYGAAKVFSYWTTRNYREAYGLFAVNGIL 180
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FNHESP R FVTRKIT A+A I+ G + +GNLDA RDWG+A EYV+GMWRMLQA
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIRAGVQSEVYMGNLDAIRDWGYAPEYVEGMWRMLQAP 240
Query: 241 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 300
EPD +VLAT R TVR+F A V L+W+ + V + ++ RP
Sbjct: 241 EPDDYVLATGRGYTVREFAQAAFDHVG--LDWQKR---------------VKFDDRYLRP 283
Query: 301 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
EVD L+G+ KA LGW+ EL +M++AD+ E D
Sbjct: 284 TEVDSLVGDADKAAQSLGWKASVHTGELARIMVDADIAALECD 326
>gi|4416473|gb|AAD20373| (AF125999) GDP-D-mannose-dehydratase mdhtA
[Mycobacterium avium]
>gi|5524326|gb|AAD44219.1|AF143772_25 (AF143772) mdhtA
[Mycobacterium avium]
Length = 343
Score = 330 bits (836), Expect = 1e-89
Identities = 178/343 (51%), Positives = 223/343 (64%), Gaps = 21/343 (6%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 60
K A+ITGITGQDG+YLA+LLL GY V+G RR+S+ N RI+ L + H +L L
Sbjct: 2 KRALITGITGQDGSYLAELLLSKGYEVHGLVRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
DLTD + V LL P EVYNLAAQS V VSFD+P+ T D TG+G++ LLEA+R+
Sbjct: 62 ADLTDGTRLVTLLSSIDPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSIRLLEAVRLSRV 121
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
RFYQAS+SEMFG PQ E TPFYPRSPYG AK++++W T NYRE+YG+FA +GIL
Sbjct: 122 DCRFYQASSSEMFG-ASPPPQNESTPFYPRSPYGAAKVFSYWTTRNYREAYGLFAVNGIL 180
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FNHESP R FVTRKIT A+A I+ G + +GNLDA RDWG+A EYV+GMWRMLQA
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIRAGVQSEVYMGNLDAIRDWGYAPEYVEGMWRMLQAP 240
Query: 241 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 300
EPD +VLAT R TVR+F A V L+W+ V + ++ RP
Sbjct: 241 EPDDYVLATGRGYTVREFAQAAFDHVG--LDWQKH---------------VKFDDRYLRP 283
Query: 301 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
EVD L+G+ KA LGW+ EL +M++AD+ E D
Sbjct: 284 TEVDSLVGDADKAAQSLGWKASVHTGELARIMVDADIAALECD 326
>gi|1524258|emb|CAB02025| (Z79701) gmdA [Mycobacterium tuberculosis]
Length = 340
Score = 328 bits (831), Expect = 6e-89
Identities = 179/341 (52%), Positives = 220/341 (64%), Gaps = 21/341 (6%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP---KLHLVE 60
K A+ITGITGQDG+YLA+LLL GY V+G RR+S+ N RI+ L + H +L L
Sbjct: 2 KRALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHY 61
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
DL D + V LL P EVYNLAAQS V VSFD+P+ T D TG+G++ LLEA+R+
Sbjct: 62 GDLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRV 121
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
RFYQAS+SEMFG PQ E TPFYPRSPYG AK+Y++W T NYRE+YG+FA +GIL
Sbjct: 122 HCRFYQASSSEMFG-ASPPPQNELTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVNGIL 180
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FNHESP R FVTRKIT A+A IK G + +GNLDA RDWG+A EYV+GMWRMLQ D
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGMWRMLQTD 240
Query: 241 EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP 300
EPD FVLAT R TVR+F A L+W + V + ++ RP
Sbjct: 241 EPDDFVLATGRGFTVREFARAAFEHAG--LDW---------------QQYVKFDQRYLRP 283
Query: 301 AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSE 341
EVD LIG+ KA LGW +EL +M++AD+ E
Sbjct: 284 TEVDSLIGDATKAAELLGWRASVHTDELARIMVDADMAALE 324
>gi|1107926|emb|CAA62143| (X90547) GDP-D-mannose 4,6-dehydratase
[Vibrio cholerae]
Length = 362
Score = 327 bits (829), Expect = 1e-88
Identities = 168/339 (49%), Positives = 226/339 (66%), Gaps = 19/339 (5%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY-- 61
K A+ITG+TGQDG+YLA+ LL GY V+G RR+SS N R++ I Q P + +
Sbjct: 3 KKALITGVTGQDGSYLAEFLLAKGYEVHGIKRRASSFNTQRVDH--IYQDPHVDNASFIL 60
Query: 62 ---DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 118
DLTD S+ R+L+ P EVYNL AQS V VSF+ P T D+ +G + LLEAIR++
Sbjct: 61 HYGDLTDSSNLTRILQEVKPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRLL 120
Query: 119 NPK--IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
+ +FYQASTSE++G VQ+TPQ E TPFYPRSPY +AK+YA+W+ VNYRESYG++A
Sbjct: 121 GLEKTTKFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKMYAYWIVVNYRESYGMYAC 180
Query: 177 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
+GILFNHESP R FVTRKIT +A I G L +GN+DA RDWG AK+YV W M
Sbjct: 181 NGILFNHESPRRGETFVTRKITRGLANIAQGLEKCLYMGNMDALRDWGHAKDYVRMQWMM 240
Query: 237 LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA----------S 286
Q D+P+ FV+AT +VR F+ +A + + L ++GQ E G+ A
Sbjct: 241 FQQDQPEDFVIATGVQYSVRQFIEWSAKELGVTLTFEGQGVDEKGIVTAIEGDKAPALKV 300
Query: 287 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTL 325
G +V I+P+++RPAEV+ L+G+P+KA+ KLGW P+ T+
Sbjct: 301 GDVVVQIDPRYFRPAEVETLLGDPSKAKQKLGWTPEITV 339
>gi|4154547 (AE001443) GDP-D-mannose dehydratase [Helicobacter
pylori J99]
Length = 381
Score = 322 bits (817), Expect = 2e-87
Identities = 172/366 (46%), Positives = 238/366 (64%), Gaps = 23/366 (6%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGI---AQHPKLH 57
M K A+ITG+TGQDG+YLA+ LL +GY V+G RRSSS+N RI+ L ++H +
Sbjct: 1 MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSEHKRRF 60
Query: 58 LVEY-DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
+ Y D+TD S+ + L+ P E+YNLAAQS V VSF+ P T + G+G + +LEA+R
Sbjct: 61 FLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMR 120
Query: 117 IVN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIF 174
I+ K RFYQASTSE++G+V +TPQ E TPF PRSPY +AK+YA ++T NYRE+Y +F
Sbjct: 121 ILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLF 180
Query: 175 AASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMW 234
A +GILFNHES +R FVTRKIT A + I D L LGNLDAKRDWG AK+YV M
Sbjct: 181 AVNGILFNHESRVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMH 240
Query: 235 RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV------------ 282
MLQA P +V+AT +T +VRDFV ++ + I LE++ +E G+
Sbjct: 241 LMLQAPTPQDYVIATGKTTSVRDFVKMSFEFIGIDLEFQNTGIKEIGLIKSVDEKRANAL 300
Query: 283 -----DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 337
+ +GK +V I+ ++RP EVDLL+G+P A +LGW + L+EL M+E D+
Sbjct: 301 QLNLSHLKTGKIVVRIDEHYFRPTEVDLLLGDPTGAEKELGWVREYDLKELVKDMLEYDL 360
Query: 338 RRSERD 343
+ +++
Sbjct: 361 KECQKN 366
>gi|2313119|gb|AAD07112.1| (AE000526) GDP-D-mannose dehydratase
(rfbD) [Helicobacter pylori 26695]
Length = 381
Score = 320 bits (811), Expect = 1e-86
Identities = 171/366 (46%), Positives = 237/366 (64%), Gaps = 23/366 (6%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGI---AQHPKLH 57
M K A+ITG+TGQDG+YLA+ LL +GY V+G RRSSS+N RI+ L + H +
Sbjct: 1 MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSDHKRRF 60
Query: 58 LVEY-DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
+ Y D+TD S+ + L+ P E+YNLAAQS V VSF+ P T + G+G + +LEA+R
Sbjct: 61 FLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMR 120
Query: 117 IVN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIF 174
I+ K RFYQASTSE++G+V +TPQ E TPF PRSPY +AK+YA ++T NYRE+Y +F
Sbjct: 121 ILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLF 180
Query: 175 AASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMW 234
A +GILFNHES +R FVTRKIT A + I D L LGNLDAKRDWG AK+YV M
Sbjct: 181 AVNGILFNHESRVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMH 240
Query: 235 RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV------------ 282
MLQA P +V+AT +T +VRDFV ++ + I LE++ +E G+
Sbjct: 241 LMLQAPIPQDYVIATGKTTSVRDFVKMSFEFIGINLEFQNTGIKEIGLIKSVDEKRANAL 300
Query: 283 -----DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 337
+ G+ +V I+ +++RP EVDLL+G+P KA +L W + L+EL M+E D+
Sbjct: 301 KLNLSHLKKGQIVVRIDERYFRPTEVDLLLGDPTKAEKELDWVREYDLKELVKDMLEYDL 360
Query: 338 RRSERD 343
+ +++
Sbjct: 361 KECQKN 366
>gi|6319186|gb|AAF07199.1|AF195140_1 (AF195140) GDP-D-mannose
4,6-dehydratase; GMD1 [Arabidopsis thaliana]
Length = 361
Score = 312 bits (792), Expect = 2e-84
Identities = 168/350 (48%), Positives = 224/350 (64%), Gaps = 30/350 (8%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP------KLH 57
K A++TGITGQDG+YL + LLE GY V+G RRSS+ N R+N + + H KLH
Sbjct: 17 KIALVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPHNVNKALMKLH 76
Query: 58 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
DL+D SS R L++ P EVYNLAAQS V VSF+ P T D+ GA+ LLEA+R
Sbjct: 77 YG--DLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 134
Query: 118 VN----PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
N I++YQA +SEMFG PQ E TPF+PRSPY +K AHW TVNYRE+YG+
Sbjct: 135 HNIDNGRAIKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGL 193
Query: 174 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGM 233
+A +GILFNHESP R +FVTRKIT A+ IK+G L LGN+ A RDWGFA +YV+ M
Sbjct: 194 YACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVEAM 253
Query: 234 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 293
W MLQ ++PD +V+AT + TV++F+ ++ V L WK E I
Sbjct: 254 WLMLQQEKPDDYVVATEESHTVKEFLDVSFGYVG--LNWKDHVE---------------I 296
Query: 294 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
+ +++RP EVD L G+ +KA+ LGW+PK E+L MM++ D+ ++R+
Sbjct: 297 DKRYFRPTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVDEDLELAKRE 346
>gi|1764100 (U81805) GDP-D-mannose-4,6-dehydratase [Arabidopsis
thaliana]
Length = 373
Score = 309 bits (783), Expect = 2e-83
Identities = 169/350 (48%), Positives = 221/350 (62%), Gaps = 30/350 (8%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP------KLH 57
K A+ITGITGQDG+YL + LL GY V+G RRSS+ N RIN + I H KLH
Sbjct: 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 88
Query: 58 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
DLTD SS R +++ P EVYNLAAQS V VSF+ P T D+ GA+ LLEA+R
Sbjct: 89 YA--DLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 146
Query: 118 ----VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
+++YQA +SEMFG PQ E TPF+PRSPY +K AHW TVNYRE+YG+
Sbjct: 147 HTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGL 205
Query: 174 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGM 233
FA +GILFNHESP R +FVTRKIT A+ IK+G L LGNL A RDWGFA +YV+ M
Sbjct: 206 FACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 265
Query: 234 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 293
W MLQ ++PD +V+AT TV +F+ ++ + L WK E I
Sbjct: 266 WLMLQQEKPDDYVVATEEGHTVEEFLDVSFGY--LGLNWKDYVE---------------I 308
Query: 294 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
+ +++RPAEVD L G+ +KA+ LGW+P+ E+L MM++ D+ ++R+
Sbjct: 309 DQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKRE 358
>gi|1073345|pir||C55239 cpsB 5'-region hypothetical protein 1 -
Escherichia coli (fragment)
Length = 324
Score = 303 bits (767), Expect = 2e-81
Identities = 151/302 (50%), Positives = 202/302 (66%), Gaps = 12/302 (3%)
Query: 53 HPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLL 112
+PK HL DL+D S+ R+L P EVYNL A S V VSF+ P T D+ +G + LL
Sbjct: 6 NPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLL 65
Query: 113 EAIRIVN--PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRES 170
EAIR + K RFYQASTSE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRES
Sbjct: 66 EAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRES 125
Query: 171 YGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYV 230
YG++A +GILFNHESP R FVTRKIT AIA I G L LGN+D+ RDWG AK+YV
Sbjct: 126 YGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYV 185
Query: 231 DGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV-------- 282
W MLQ ++P+ FV+AT +VR FV +AA+ + I+L ++G E G+
Sbjct: 186 KMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHD 245
Query: 283 --DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRS 340
V G ++ ++P+++RPAEV+ L+G+P KA KLGW+P+ TL E+ M+ D+ +
Sbjct: 246 APGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAA 305
Query: 341 ER 342
++
Sbjct: 306 KK 307
>gi|6562268|emb|CAB62638.1| (AL132980) GDP-D-mannose-4,
6-dehydratase (MUR1) [Arabidopsis thaliana]
Length = 373
Score = 303 bits (767), Expect = 2e-81
Identities = 167/350 (47%), Positives = 219/350 (61%), Gaps = 30/350 (8%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP------KLH 57
K A+ITGITGQDG+YL + LL GY V+G RRSS+ N RIN + I H KLH
Sbjct: 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 88
Query: 58 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
DLTD SS R +++ P EVYNLAAQS V VSF+ P T D+ GA+ LLEA+R
Sbjct: 89 YA--DLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 146
Query: 118 ----VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
+++YQA +SEMFG PQ E TP + RSPY +K AHW TVNYRE+YG+
Sbjct: 147 HTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPIHLRSPYAASKCAAHWYTVNYREAYGL 205
Query: 174 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGM 233
FA +GILFNHESP R +FVTRKIT A+ IK+G L LGNL A RDWGFA +YV+ M
Sbjct: 206 FACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 265
Query: 234 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 293
W MLQ ++PD +V+AT TV +F+ ++ + L WK E I
Sbjct: 266 WLMLQQEKPDDYVVATEEGHTVEEFLDVSFGY--LGLNWKDYVE---------------I 308
Query: 294 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERD 343
+ +++RPAEVD L G+ +KA+ LGW+P+ E+L MM++ D+ ++R+
Sbjct: 309 DQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKRE 358
>gi|1651998|dbj|BAA16924| (D90901) GDP-D-mannose dehydratase
[Synechocystis sp.]
Length = 320
Score = 260 bits (658), Expect = 1e-68
Identities = 140/332 (42%), Positives = 197/332 (59%), Gaps = 19/332 (5%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
K A+I+GI+GQDGAYLAQLL+E Y V+GT R + NF + LGI + K+ V L
Sbjct: 2 KIALISGISGQDGAYLAQLLIEKSYAVWGTSRDAQISNFRNLKILGIRESIKV--VSMAL 59
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
TD S ++++ P E+YNLA QS VG+SF+QP+ T + +G +NLLE +R ++ I+
Sbjct: 60 TDFRSVLQVVSQVNPDEIYNLAGQSSVGLSFEQPVETLESITIGTLNLLEVVRFLDKPIK 119
Query: 124 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 183
Y AS+SE FG + E T F PRSPY +AK A W NYRE+Y ++A SGILFNH
Sbjct: 120 LYSASSSECFGDTGNSAADENTAFRPRSPYAVAKSAAFWQVANYREAYNLYACSGILFNH 179
Query: 184 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 243
ESPLR FVT+KI I G + L LGN RDWG+A EYV+ M+ MLQ +PD
Sbjct: 180 ESPLRPERFVTQKIIATACRIAQGSQEKLYLGNTSISRDWGWAPEYVEAMYLMLQQAKPD 239
Query: 244 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 303
+V+AT + ++DFV + S+ + L W+ V I+ +RP ++
Sbjct: 240 DYVIATGASYLLQDFVEITFSS--LGLNWREH---------------VIIDQSLFRPTDL 282
Query: 304 DLLIGNPAKARTKLGWEPKTTLEELCHMMMEA 335
+ NP KA+ +LGW+ + ++ MM+ A
Sbjct: 283 AMGKANPRKAQEQLGWKAEYKTPDVVKMMINA 314
>gi|4321414|gb|AAD15751.1| (AF049343) GDP-mannose dehydratase
[Escherichia coli]
Length = 199
Score = 221 bits (557), Expect = 8e-57
Identities = 108/180 (60%), Positives = 131/180 (72%), Gaps = 2/180 (1%)
Query: 72 LLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN--PKIRFYQAST 129
+L+ P EVYNLAA S V VSF+ P T D+ +G + LLEAIR + K RFYQAST
Sbjct: 1 ILKEVQPDEVYNLAAMSHVAVSFESPEYTADVDAIGTLRLLEAIRFLGLENKTRFYQAST 60
Query: 130 SEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHESPLRA 189
SE++G VQ+ PQ E TPFYPRSPY +AKLYA+W+TVNYRESYGI+A +GILFNHESP R
Sbjct: 61 SELYGLVQEIPQKESTPFYPRSPYAVAKLYAYWITVNYRESYGIYACNGILFNHESPRRG 120
Query: 190 RDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPDTFVLAT 249
FVTRKIT +A I G L LGN+D+ RDWG AK+YV W MLQ ++P+ FV+AT
Sbjct: 121 ETFVTRKITRGLANIAQGLESCLYLGNMDSLRDWGHAKDYVRMQWLMLQQEQPEDFVIAT 180
>gi|2909577|emb|CAA17306| (AL021926) gca [Mycobacterium
tuberculosis]
Length = 318
Score = 95.6 bits (234), Expect = 6e-19
Identities = 83/336 (24%), Positives = 138/336 (40%), Gaps = 42/336 (12%)
Query: 8 ITGITGQDGAYLAQLLLEMGYVVYGTYRRS----SSLNFWRINELGIAQHPKLHLVEYDL 63
ITG G G++LA++LL G+ VY TY R S L F + E D+
Sbjct: 5 ITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQF--------------NGAEVDI 50
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
TD S + P V++LAAQS+ VS+ +P+ T VG + EA+R V P +
Sbjct: 51 TDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAK 110
Query: 124 FYQASTSEMFGKV--QQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
A +S +G V + P E P PYG++K + Y +SYG+ +F
Sbjct: 111 IIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIF 170
Query: 182 NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 241
N P + D ++ + + + +++GNL KR ++ + ML E
Sbjct: 171 NCTGPRKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKGE 230
Query: 242 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 301
S+A D+ + +R+ + ++P RP
Sbjct: 231 AGADYNVGG---------SIAYEMGDVLKQVIAACKRD--------DIVPEVDPALLRPT 273
Query: 302 EVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 337
+ ++ G+ +K GW+ +E+C AD+
Sbjct: 274 DEKIIYGDCSKLAAITGWQ-----QEICLTQTIADM 304
>gi|3249547 (AF009955) oxidoreductase Rmd [Pseudomonas aeruginosa]
Length = 284
Score = 88.2 bits (215), Expect = 1e-16
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 24/271 (8%)
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
YDL + SV L P V +LA Q++V +F P T I +G +NLL+A++
Sbjct: 18 YDLLE-PDSVGDLWPELPDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGF 76
Query: 121 KIRFYQASTSEMFGKVQQT--PQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 178
F S+ +++G+V + P EE +PR+PY ++KL A + + + + G
Sbjct: 77 SGTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVA 136
Query: 179 ILFNHESPLRARDFVTRKITHAIAMIKLG-KLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
FNH P + FV IA +K G + + L++G++D RD+ ++ + R+L
Sbjct: 137 RPFNHIGPGQKDSFVIASAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLL 196
Query: 238 QADEPD-TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 296
E + + + + + +R+ + L A ++LE + +P
Sbjct: 197 SHGEAGAVYNVCSGQEQKIRELIELLADIAQVELE-------------------IVQDPA 237
Query: 297 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
R AE + G+ A+ GW+P+ T+++
Sbjct: 238 RMRRAEQRRVRGSHARLHDTTGWKPEITIKQ 268
>gi|6458415|gb|AAF10287.1|AE001927_6 (AE001927) UDP-glucose
4-epimerase, putative [Deinococcus radiodurans]
Length = 344
Score = 81.9 bits (199), Expect = 7e-15
Identities = 87/326 (26%), Positives = 145/326 (43%), Gaps = 33/326 (10%)
Query: 8 ITGITGQDGAYLAQLLLEMGYVV--YGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTD 65
+TG G G++L + L+ GY V Y S + + +H ++ L D+ D
Sbjct: 21 VTGADGFIGSHLTEDLVRAGYRVRAMAIYNSQGSYGWLDTVPGEVMEHVEVQLG--DVRD 78
Query: 66 LSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFY 125
+ SVR L + + VY+LAA + S+ P + + G +N+LEA R + R
Sbjct: 79 -AGSVRAL-MRDVQTVYHLAALIAIPYSYVAPRSYVETNITGTLNVLEAARDLGTG-RVI 135
Query: 126 QASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHES 185
STSE++G + P E P +SPY K+ A + +Y S+G+ + FN
Sbjct: 136 HTSTSEVYGTARSVPIHESHPLQGQSPYSATKIGADKLAESYFLSFGLPVVTLRPFNTYG 195
Query: 186 PLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD-- 243
P R I I+ + G+ ++ KLG+L RD+ + + +R + P+
Sbjct: 196 P---RQSARAVIPTIISQLAAGRTEI-KLGDLRPTRDFNYVADTARA-FRAVGEAGPEVL 250
Query: 244 --TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 301
T + R +V D V L A + +E K + ER + P+ +
Sbjct: 251 GRTLNAGSGREISVGDTVKLIAQVMGKDVEVKQEDER--------------LRPE---GS 293
Query: 302 EVDLLIGNPAKARTKLGWEPKTTLEE 327
EV L+ + + +T GW+P+ TLEE
Sbjct: 294 EVMRLLADHRELQTLTGWQPQVTLEE 319
>gi|4234783|gb|AAD12951.1| (AF078135) unknown [Leptospira
borgpetersenii]
Length = 332
Score = 79.2 bits (192), Expect = 5e-14
Identities = 84/322 (26%), Positives = 141/322 (43%), Gaps = 30/322 (9%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWR-INELGIAQHPKLHLVEYD 62
K ++TG G G++L + L+ +G+ V + +S N W ++ K + D
Sbjct: 2 KKILVTGADGFIGSHLTEALVRLGFEVKA-FVYYNSFNTWGWLDYCSSDVRGKFEIFTGD 60
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D + VR + V +LAA + S+ P T D G +N+L+A R +N
Sbjct: 61 VRD-PNGVRTA-MKGIDAVLHLAALIGIPYSYHSPDTYVDTNIKGTLNVLQAARDLNLS- 117
Query: 123 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 182
R STSE++G Q P EE P +SPY +K+ A + ++ S+ FN
Sbjct: 118 RVIHTSTSEVYGTAQFVPITEEHPLKGQSPYSASKIGADQLAYSFYSSFSTPVIIVRPFN 177
Query: 183 HESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 241
P + AR + IT ++ GK + +LG+ RD+ F + V+G L++ +
Sbjct: 178 TYGPRQSARAIIPTVITQLLS----GKTKI-QLGSTSPTRDFNFVTDTVNGFISALKSKQ 232
Query: 242 --PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYR 299
+ + +V D V L AS +D ++E R I P+
Sbjct: 233 GLGEVINIGNGFEISVGDTVKLIASILDKEVEIVSDVNR--------------IRPE--- 275
Query: 300 PAEVDLLIGNPAKARTKLGWEP 321
+EV+ L + KA+ GW+P
Sbjct: 276 KSEVERLWSSNQKAKDLFGWQP 297
>gi|4972096|emb|CAB43892.1| (AL078468) UDPglucose 4-epimerase-like
protein [Arabidopsis thaliana]
Length = 350
Score = 76.1 bits (184), Expect = 4e-13
Identities = 81/341 (23%), Positives = 145/341 (41%), Gaps = 31/341 (9%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY 61
KS ++TG G G++ LLE GY VV Y SS+ + R+ +L +L +
Sbjct: 3 KSVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQV 62
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
DL D + ++ V + A VG S ++PL + VG V LLE + K
Sbjct: 63 DLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCK 122
Query: 122 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
+ +S++ ++G ++ P EE+P +PYG KL+ + + S + IL
Sbjct: 123 NLVF-SSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKI--ILL 179
Query: 182 NHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLDAK-RDWGFAKEYVD 231
+ +P+ A V + + + +G+ L + D K +D ++Y+
Sbjct: 180 RYFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIH 239
Query: 232 GMWRMLQADEPDTFVLATNRTETVR---DFVSLAASAVDIQLEWKGQAERECGVDVASGK 288
M D D + A + + ++ + +L LE E+ ASGK
Sbjct: 240 VM------DLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEK------ASGK 287
Query: 289 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
+ + RP + +++ + KA +L W+ K +EE+C
Sbjct: 288 KIPLVMAG-RRPGDAEVVYASTEKAERELNWKAKNGIEEMC 327
>gi|5814300|gb|AAD52168.1|AF144879_7 (AF144879) unknown [Leptospira
interrogans]
Length = 332
Score = 74.1 bits (179), Expect = 2e-12
Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 30/322 (9%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWR-INELGIAQHPKLHLVEYD 62
K ++TG G G++L + L+ G+ V + +S N W ++ K + D
Sbjct: 2 KKILVTGADGFIGSHLTEALVRSGFEVKA-FVYYNSFNTWGWLDYCSDDVRGKFEIFTGD 60
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D + VR + V +LAA + S+ P T D G +N+L+A R +N
Sbjct: 61 VRD-PNGVRTA-MKGTDAVLHLAALIGIPYSYHSPDTYIDTNIKGTLNVLQAARDLNLS- 117
Query: 123 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 182
+ STSE++G Q P EE P +SPY +K+ A + ++ S+ FN
Sbjct: 118 KVIHTSTSEVYGTAQFVPITEEHPLKGQSPYSASKIGADQLAYSFYSSFSTPVIIVRPFN 177
Query: 183 HESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 241
P + AR + IT ++ GK V +LG+ RD+ F + V+G L++ +
Sbjct: 178 TYGPRQSARAIIPTVITQLLS----GKTKV-QLGSTSPTRDFNFVTDTVNGFISALKSKQ 232
Query: 242 --PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYR 299
+ + +V D V L A+ + ++E + R I P+
Sbjct: 233 GFGEVINIGNGFEISVGDTVKLIANIIGKEIEIVSDSNR--------------IRPE--- 275
Query: 300 PAEVDLLIGNPAKARTKLGWEP 321
+EV+ L + KA+ L W+P
Sbjct: 276 KSEVERLWASNQKAKDLLNWQP 297
>gi|2650312 (AE001082) dTDP-glucose 4,6-dehydratase (rfbB)
[Archaeoglobus fulgidus]
Length = 332
Score = 72.6 bits (175), Expect = 5e-12
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
+A+ + ++ D+ D L++ V N AA+S V S P + +G
Sbjct: 46 LAEDERYSFIKGDINDYELVSDLIKKV--DAVVNFAAESHVDRSISSPYAFIESNFLGVY 103
Query: 110 NLLEAIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRE 169
+LEA+R NP++R ST E++G +++ E+ P SPY +K A + + Y
Sbjct: 104 TILEAVRKCNPEVRLVHVSTDEVYGDIEKGSFTEKDGLMPSSPYSASKAAADMLVLGYAR 163
Query: 170 SYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEY 229
+Y + A+ N+ P + F + I I K+ L V G RDW + +++
Sbjct: 164 TYNLNASITRCTNNYGPYQ---FPEKLIPKTIIRAKM-NLSVPIYGTGMNVRDWIYVEDH 219
Query: 230 VDGMWRMLQADE 241
+W +++ E
Sbjct: 220 CRAVWEVMEKGE 231
>gi|1710104|sp|P55295|RFBB_XANCA DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1073090|pir||B49906 rfbB homolog - Xanthomonas
campestris pv. campestris >gi|398120 (L23941)
TDP-glucose oxireductase [Xanthomonas campestris]
Length = 351
Score = 71.8 bits (173), Expect = 8e-12
Identities = 73/279 (26%), Positives = 116/279 (41%), Gaps = 25/279 (8%)
Query: 59 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR-- 116
V+ D+ D + RLL+ P V N AA+S V S + P VG + LLEA+R
Sbjct: 55 VKGDIGDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDY 114
Query: 117 ------IVNPKIRFYQASTSEMFGKVQQTPQI-EETPFYPRSPYGIAKLYAHWMTVNYRE 169
RF ST E++G + +T + E TP+ P SPY +K + + +
Sbjct: 115 WKALPDTRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHH 174
Query: 170 SYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEY 229
+YG+ + N+ P F + I IA G+ + G+ RDW F ++
Sbjct: 175 TYGLPVLTTNCSNNYGPYH---FPEKLIPLVIAKALAGE-PLPVYGDGKQVRDWLFVSDH 230
Query: 230 VDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGK 288
+ + +L + +T+ + N + V + +D RE G S
Sbjct: 231 CEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLD------QHRPREDGKPRESQI 284
Query: 289 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
VT P R +D +K + +LGWEP T E+
Sbjct: 285 AYVTDRPGHDRRYAID-----ASKLKDELGWEPAYTFEQ 318
>gi|3258173|dbj|BAA30856.1| (AP000007) 306aa long hypothetical
UDP-glucose 4-epimerase [Pyrococcus horikoshii]
Length = 306
Score = 70.6 bits (170), Expect = 2e-11
Identities = 83/328 (25%), Positives = 144/328 (43%), Gaps = 37/328 (11%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 60
M NK VITG G G++LA+ L + V+ +L RI + + +
Sbjct: 1 MKNKLIVITGGAGFIGSHLAEALKDENDVII-----IDNLYSGRIENIPEG----VKFIR 51
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
D+ D S ++ A V++ AAQ V S + P+ T ++ +G +N+L A+ +
Sbjct: 52 ADVRDYESIAEVISEA--DYVFHEAAQISVKESIEDPVFTEEVNVIGTINVLRALSQGDG 109
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
K+ F AS++ ++G+ ++ P E+T P SPYGI KL A Y+ YGI
Sbjct: 110 KLIF--ASSAAVYGEPKELPITEDTLTNPISPYGITKLAAEHYCRVYQSLYGIPVVILRY 167
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FN P ++ + IK L + G+ RD+ + K+ V+
Sbjct: 168 FNVYGPRQSSAYAGVISIFLERAIKGEPLII--FGDGKQTRDFIYVKDVVEA-------- 217
Query: 241 EPDTFVLATNRTETVRDF-VSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYR 299
++A R+ R F V+ ++L K +D+ S + + P R
Sbjct: 218 ---NILVAKKRSANGRIFNVATGKETTILELAMK-------IIDMTSSSSSILFYPP--R 265
Query: 300 PAEVDLLIGNPAKARTKLGWEPKTTLEE 327
P ++ + + + KLG++P+ +LEE
Sbjct: 266 PGDIRRSVAKIERIK-KLGFKPRYSLEE 292
>gi|5457737|emb|CAB49227.1| (AJ248284) UDP-glucose 4-epimerase
(galE-1) [Pyrococcus abyssi]
Length = 307
Score = 70.6 bits (170), Expect = 2e-11
Identities = 79/331 (23%), Positives = 146/331 (43%), Gaps = 43/331 (12%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 60
M NK V+TG G G+++A+ L E VV N + + + K +E
Sbjct: 1 MRNKLIVVTGGAGFIGSHIAEALKEENDVVVID-------NLYSGKPENVPEGVKF--IE 51
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
D+ D S ++ A V++ AAQ V S P+ T ++ +G +N+L A+ N
Sbjct: 52 ADVRDYESIAEIVSSA--DYVFHEAAQISVEESVKDPVFTEEVNVIGTINILRALSEGNG 109
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
K+ F AS++ ++G+ P E+ P P SPYG++K+ + + YG+
Sbjct: 110 KLIF--ASSAAVYGEPTSLPIREDHPLNPISPYGVSKVSGEHYCKVFYQLYGVPTVILRY 167
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FN P ++ + + L ++ G+ RD+ + K+ V+ +L A+
Sbjct: 168 FNVYGPRQSSAYA--GVISIFMERALRGEPLVIFGDGKQSRDFVYVKDVVEA--NILVAE 223
Query: 241 ----EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 296
E +TF + T R T+ + LA +++ ++ ++ P
Sbjct: 224 KRRAEGETFNVGTGRETTI---IELAMKIIELS---------------STSSQILFSKP- 264
Query: 297 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
RP ++ + + K + KLG++P+ +LEE
Sbjct: 265 --RPGDIRRSVADIEKIK-KLGFKPRYSLEE 292
>gi|1944159|dbj|BAA19633| (AB002668) dTDP-D-glucose-4,6-dehydratase
[Actinobacillus actinomycetemcomitans]
Length = 355
Score = 69.1 bits (166), Expect = 5e-11
Identities = 75/341 (21%), Positives = 141/341 (40%), Gaps = 39/341 (11%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELG-------IAQHPKL 56
K+ ++TG G G+ + + ++E + S +N ++ G + +P+
Sbjct: 3 KTILVTGGAGFIGSAVVRYIIEN--------TQDSVVNVDKLTYAGNLESLEAVKNNPRY 54
Query: 57 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
+ D+ D + R+ E P V +LAA+S V S D P T + VG LLEA R
Sbjct: 55 IFEQVDICDAKALARIFEQHQPDAVMHLAAESHVDRSIDGPATFIETNIVGTYILLEAAR 114
Query: 117 -----IVNPK---IRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVN 166
+++ K RF+ ST E++G + T + E TP+ P SPY +K + +
Sbjct: 115 AYWSSLIDEKKAGFRFHHISTDEVYGDLDGTNNLFTETTPYSPSSPYSASKASSDHLVRA 174
Query: 167 YRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFA 226
+ +Y + N+ P K+ I + L + GN RDW F
Sbjct: 175 WLRTYSLPTIVTNCSNNYGP----KVFPEKLIPLIILNALDGKPLPVYGNGQQIRDWLFV 230
Query: 227 KEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA 285
+++ +++++ + +T+ + + + D V + ++ + + V
Sbjct: 231 EDHARALYKVVTEGKIGETYNIGGHNEKANIDVVRTICALLE-------ELVPDKPAGVT 283
Query: 286 SGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
+ L+T RP + K +LGW+P+ T E
Sbjct: 284 KYEDLITYVKD--RPGHDVRYAIDATKISRELGWKPQETFE 322
>gi|4981021|gb|AAD35594.1|AE001727_6 (AE001727) UDP-glucose
4-epimerase, putative [Thermotoga maritima]
Length = 309
Score = 67.9 bits (163), Expect = 1e-10
Identities = 78/337 (23%), Positives = 132/337 (39%), Gaps = 47/337 (13%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
++TG G G+++ L+E GY V SS ++ L + E + D
Sbjct: 4 LVTGGAGFIGSHVVDKLIENGYGVIVVDNLSSG----KVENL----NRNALFYEQSIEDE 55
Query: 67 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 126
R+ L P+ V++LAAQ+ V +S +P +G++ LLE K +
Sbjct: 56 EMMERIFSLHRPEYVFHLAAQASVAISVREPARDAKTNIIGSLVLLEKSIKYGVKKFIFS 115
Query: 127 ASTSEMFG---KVQQTPQIEETPFYPRSPYGIAK----LYAHWMTVNYRESYGIFAASGI 179
++ ++G KV TP+ E +P SPYGIAK +Y + Y Y + + +
Sbjct: 116 STGGAIYGENVKVFPTPETEIP--HPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANV 173
Query: 180 LFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQA 239
+ P + + L +V G+ + RD+ + + V ++
Sbjct: 174 YGPRQDP-----YGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAMEK 228
Query: 240 DEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYR 299
+ + F + T R TV L E P +
Sbjct: 229 GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKE-----------------------PVYKP 265
Query: 300 PAEVDL--LIGNPAKARTKLGWEPKTTLEELCHMMME 334
P + D+ I + KA+ KLGWEPK +LEE + +E
Sbjct: 266 PRKGDVRKSILDYTKAKEKLGWEPKVSLEEGLKLTVE 302
>gi|5739472|gb|AAD50494.1|AF172324_12 (AF172324) WbnF [Escherichia
coli]
Length = 334
Score = 67.5 bits (162), Expect = 2e-10
Identities = 63/236 (26%), Positives = 102/236 (42%), Gaps = 15/236 (6%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-FWRIN----ELGIAQHPKLHLVEY 61
++TG G G Y+++ LL G+ V G +LN ++ +N L + +H +
Sbjct: 4 LVTGAAGFIGFYVSKRLLAAGHQVVGI----DNLNDYYDVNLKQARLDLLKHDNFSFYKI 59
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
DL D L V NLAAQ+ V S + P D +G +N+LE R N +
Sbjct: 60 DLADREKMAALFADERFDRVINLAAQAGVRYSLENPNAYADANLIGFLNILEGCRHNNVQ 119
Query: 122 IRFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
Y AS+S ++G ++ P +++ +P S Y K M Y YG+
Sbjct: 120 HLLY-ASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPTTGLRF 178
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
F P D K T AM++ +DV G + KRD+ + + + + R+
Sbjct: 179 FTVYGPWGRPDMALFKFTK--AMLEGKSIDVYNFGKM--KRDFTYIDDIAEAIIRL 230
>gi|3132254|dbj|BAA28131| (AB010415) dTDP-D-glucose-4,6-dehydratase
[Actinobacillus actinomycetemcomitans]
Length = 355
Score = 66.7 bits (160), Expect = 3e-10
Identities = 77/344 (22%), Positives = 138/344 (39%), Gaps = 45/344 (13%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELG-------IAQHPKL 56
K+ ++TG G G+ + + ++E + S +N ++ G + +P+
Sbjct: 3 KTILVTGGAGFIGSAVVRYIIEN--------TQDSVVNVDKLTYAGNLESLETVKNNPRY 54
Query: 57 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
+ D+ D + R+ E P V +LAA+S V S D P + VG LLEA R
Sbjct: 55 IFEQVDICDAKALARIFEQHQPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYILLEAAR 114
Query: 117 IV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVN 166
RF+ ST E++G + T + E TP+ P SPY +K + +
Sbjct: 115 AYWSSLNDEKKAGFRFHHISTDEVYGDLDGTKNLFTETTPYSPSSPYSASKASSDHLVRA 174
Query: 167 YRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKL---GNLDAKRDW 223
+ +Y + N+ P + I +I L LD L GN RDW
Sbjct: 175 WLRTYSLPTIVTNCSNNYGPFHFPE-------KLIPLIILNALDGKPLPVYGNGQQIRDW 227
Query: 224 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 282
F +++ +++++ + +T+ + + + D V + ++ + K
Sbjct: 228 LFVEDHARALYKVVTEGKIGETYNIGGHNEKANIDVVRTICALLEELVPNK-------PA 280
Query: 283 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
V + L+T RP + K +LGW+P+ T E
Sbjct: 281 GVTKYEDLITYVKD--RPGHDVRYAIDATKISRELGWKPQETFE 322
>gi|3135674 (AF064070) putative dTDP-D-glucose 4,6-dehydratase
[Burkholderia pseudomallei]
Length = 353
Score = 66.7 bits (160), Expect = 3e-10
Identities = 70/285 (24%), Positives = 107/285 (36%), Gaps = 27/285 (9%)
Query: 53 HPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLL 112
+PK D+ D ++ LL P+ + + AA+S V S P VG LL
Sbjct: 48 NPKHVFARVDICDRAAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLL 107
Query: 113 EAIRI--------VNPKIRFYQASTSEMFGKVQQT-PQIEET-PFYPRSPYGIAKLYAHW 162
EA R RF ST E+FG + PQ ET P+ P SPY K +
Sbjct: 108 EAARQYWSALGPDAKAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDH 167
Query: 163 MTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRD 222
+ Y +YG+ + N+ P + K+ + LG + G+ RD
Sbjct: 168 LVRAYHHTYGLPVLTTNCSNNYGPYQ----FPEKLIPLMIANALGGKPLPVYGDGQNVRD 223
Query: 223 WGFAKEYVDGMWRMLQADEP-DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECG 281
W + ++ + +L P +T+ + + D V +D +A + G
Sbjct: 224 WLYVGDHCSAIREVLARGVPGETYNVGGWNEKKNLDVVHTLCDLLD-------EARPKAG 276
Query: 282 VDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
T VT P R +D K +LGW+P T E
Sbjct: 277 GSYRDQITYVTDRPGHDRRYAID-----ARKLERELGWKPAETFE 316
>gi|5545317|dbj|BAA82532.1| (AB030032) dTDP-D-glucose
4,6-dehydratase [Actinobacillus actinomycetemcomitans]
Length = 355
Score = 66.7 bits (160), Expect = 3e-10
Identities = 77/344 (22%), Positives = 138/344 (39%), Gaps = 45/344 (13%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELG-------IAQHPKL 56
K+ ++TG G G+ + + ++E + S +N ++ G + +P+
Sbjct: 3 KTILVTGGAGFIGSAVVRYIIEN--------TQDSVVNVDKLTYAGNLESLEAVKNNPRY 54
Query: 57 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
+ D+ D + R+ + P V +LAA+S V S D P + VG LLEA R
Sbjct: 55 TFEQVDICDAKALARIFQQHRPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYILLEAAR 114
Query: 117 IV--------NPKIRFYQASTSEMFGKVQQTPQ--IEETPFYPRSPYGIAKLYAHWMTVN 166
RF+ ST E++G + T IE TP+ P SPY +K + +
Sbjct: 115 AYWNSLNDEKKAVFRFHHISTDEVYGDLDGTNNLFIETTPYSPSSPYSASKASSDHLVRA 174
Query: 167 YRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKL---GNLDAKRDW 223
+ +Y + N+ P + I +I L LD L GN RDW
Sbjct: 175 WLRTYSLPTIVTNCSNNYGPFHFPE-------KLIPLIILNALDGKPLPVYGNGQQIRDW 227
Query: 224 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 282
F +++ +++++ + +T+ + + + D V + ++ + K
Sbjct: 228 LFVEDHARALYKVVAEGKIGETYNIGGHNEKANIDVVRTICALLEELVPNK-------PA 280
Query: 283 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
V + L+T RP + K +LGW+P+ T E
Sbjct: 281 GVTKYEDLITYVKD--RPGHDVRYAIDATKISRELGWKPQETFE 322
>gi|5458599|emb|CAB50087.1| (AJ248286) dTDP-glucose 4,6-dehydratase
(rfbB) [Pyrococcus abyssi]
Length = 333
Score = 66.3 bits (159), Expect = 4e-10
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
I P+ V+ D+ D L++ + + AA+S V S P +G
Sbjct: 47 IQDDPRYTFVKGDVADFELVRELIKKV--DAIVHFAAESHVDRSISSPDNFLHSNVIGTY 104
Query: 110 NLLEAIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRE 169
LLEAIR NP +R ST E++G + + EE P SPY K + + + +
Sbjct: 105 TLLEAIRKENPGVRLVHISTDEVYGDILKGSFTEEDRLMPSSPYSATKAASDMLVLGWAR 164
Query: 170 SYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEY 229
+YG+ A+ N+ P + F + I I K+G L V G RDW + +++
Sbjct: 165 TYGLNASITRCTNNYGPYQ---FPEKLIPKTIIRAKMG-LKVPIYGTGKNVRDWLYVEDH 220
Query: 230 VDGMWRMLQADE 241
V + +L E
Sbjct: 221 VRAIEAVLLKGE 232
>gi|2129578|pir||S58282 dTDP-glucose 4-6-dehydratases homolog -
Arabidopsis thaliana >gi|928932|emb|CAA89205| (Z49239)
homolog of dTDP-glucose 4-6-dehydratases [Arabidopsis
thaliana] >gi|1585435|prf||2124427B diamide resistance
gene [Arabidopsis thaliana]
Length = 445
Score = 65.6 bits (157), Expect = 6e-10
Identities = 81/339 (23%), Positives = 140/339 (40%), Gaps = 52/339 (15%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVEYDL 63
V+TG G G++L L+ G V NF+ + + H P ++ +D+
Sbjct: 122 VVTGGAGFVGSHLVDRLMARGDTVIVVD------NFFTGRKENVMHHFSNPNFEMIRHDV 175
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQ-SFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ LLE+ ++Y+LA S V F+ P+ T VG +N+L + V
Sbjct: 176 VEPI----LLEV---DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA-- 225
Query: 123 RFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 177
RF STSE++G Q PQ+E P RS Y K A +T++Y +
Sbjct: 226 RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGSNVEVRI 285
Query: 178 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
+FN P D R +++ +A L K + G+ R + F + V+G+ R++
Sbjct: 286 ARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 343
Query: 238 QADEPDTFVLATNRTETVRDFVSLAASAVD--IQLEWKGQAERECGVDVASGKTLVTINP 295
+ + F L T+ + + +D +E++ E + P
Sbjct: 344 EGEHVGPFNLGNPGEFTMLELAKVVQETIDPNANIEFRPNTEDD---------------P 388
Query: 296 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMME 334
+P + KA+ LGWEPK +L + +M++
Sbjct: 389 HKRKP--------DITKAKELLGWEPKVSLRQGLPLMVK 419
>gi|4679656|emb|CAB41308.1| (AL033517) GMDS (GDP-mannose
4,6-dehydratase) [Homo sapiens]
Length = 72
Score = 65.6 bits (157), Expect = 6e-10
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 233 MWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVT 292
MW MLQ DEP+ FV+AT +VR+FV + + + W+G+ E E G +GK VT
Sbjct: 2 MWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT 61
Query: 293 INPKFYRPAEV 303
++ K+YRP EV
Sbjct: 62 VDLKYYRPTEV 72
>gi|729026|sp|P39858|CAPI_STAAU CAPI PROTEIN >gi|506705 (U10927)
CapI [Staphylococcus aureus]
Length = 334
Score = 65.2 bits (156), Expect = 8e-10
Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 17/239 (7%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYR----RSSSLNFWRINELGIAQHP--KLHLVE 60
+ITG G G++LA+ L++ G+ V G S SL R+ +G K+ L
Sbjct: 4 LITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLEN 63
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
YD DLS ++ P+ V NLAAQ+ V S + P T D VG +N+LE R N
Sbjct: 64 YD--DLS---KVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNI 118
Query: 121 KIRFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 179
+ Y AS+S ++G P + +P S Y K M Y Y +
Sbjct: 119 QNLIY-ASSSSVYGANTSKPFSTSDNIDHPLSLYAATKKSNELMAHTYSHLYNLPTTGLR 177
Query: 180 LFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 238
F P D K T AI + +DV GN+ RD+ + + V+ + R+++
Sbjct: 178 FFTVYGPWGRPDMALFKFTKAI--VNDQAIDVYNHGNM--MRDFTYVDDIVEAISRLVK 232
>gi|1223961 (U29691) CDP-tyvelose epimerase [Yersinia
pseudotuberculosis]
Length = 338
Score = 65.2 bits (156), Expect = 8e-10
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVY---GTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
+ITG G G+ LA ++ G V R SS N + +G + V D+
Sbjct: 4 LITGGCGFLGSNLASHAIKSGMEVIVFDNLSRYGSSDNLKWLQSIGGFTY-----VHGDI 58
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
+ + RL++ P +++LA Q + S D P ++ G NLLEAIR+ NP+
Sbjct: 59 RNRNDITRLIQKFKPDSIFHLAGQVAMTTSIDNPQMDFEVNVGGTFNLLEAIRLFNPECG 118
Query: 124 FYQASTSEMFGKVQQTPQIEETPFYP----------------RSPYGIAKLYAHWMTVNY 167
+ST++++G ++Q E Y SPYG +K A ++Y
Sbjct: 119 IIYSSTNKVYGDLEQFTYRETDTRYECIEMPDGFDESTQLTFHSPYGCSKGAADQYMLDY 178
Query: 168 RESYGIFAASGILFNHESPLRARDFVT 194
YG+ ++F H S R F T
Sbjct: 179 ARIYGL---KTVVFRHSSMYGGRQFST 202
>gi|4539370|emb|CAB40064.1| (AL049525) UDP-galactose
4-epimerase-like protein [Arabidopsis thaliana]
Length = 351
Score = 64.8 bits (155), Expect = 1e-09
Identities = 77/345 (22%), Positives = 146/345 (42%), Gaps = 33/345 (9%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHL 58
M ++ +++G G G++ LL GY VV SS+++ R+ +L +L
Sbjct: 1 MMARNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSF 60
Query: 59 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 118
+ DL D S+ ++ V + A VG S ++PL + VG + LLE +
Sbjct: 61 HQVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQH 120
Query: 119 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA-S 177
K + +S++ ++G ++ P EE P +PYG KL+ + R+ YG
Sbjct: 121 GCKNLVF-SSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEIC---RDVYGSDPEWK 176
Query: 178 GILFNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAK 227
IL + +P+ A + + + + +G+ L + GN +D +
Sbjct: 177 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVR 236
Query: 228 EYVDGMWRMLQADEPDTFVLATNRTETVR---DFVSLAASAVDIQLEWKGQAERECGVDV 284
+Y+ + D D + A + E + + +L LE E+
Sbjct: 237 DYIHVI------DLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEK------ 284
Query: 285 ASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
ASGK + + RP + +++ + +A ++L W+ K +EE+C
Sbjct: 285 ASGKKIPLVIAG-RRPGDAEVVYASTERAESELNWKAKYGIEEMC 328
>gi|3738279|gb|AAC63621.1| (AC005309) putative nucleotide-sugar
dehydratase [Arabidopsis thaliana]
Length = 443
Score = 64.4 bits (154), Expect = 1e-09
Identities = 81/339 (23%), Positives = 140/339 (40%), Gaps = 52/339 (15%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLVEYDL 63
V+TG G G++L L+ G V NF+ + + H P ++ +D+
Sbjct: 124 VVTGGAGFVGSHLVDRLMARGDNVIVVD------NFFTGRKENVMHHFNNPNFEMIRHDV 177
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQ-SFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ LLE+ ++Y+LA S V F+ P+ T VG +N+L + V
Sbjct: 178 VEPI----LLEV---DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA-- 227
Query: 123 RFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 177
RF STSE++G Q PQ+E P RS Y K A +T++Y +
Sbjct: 228 RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRI 287
Query: 178 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
+FN P D R +++ +A L K + G+ R + F + V+G+ R++
Sbjct: 288 ARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 345
Query: 238 QADEPDTFVLATNRTETVRDFVSLAASAVD--IQLEWKGQAERECGVDVASGKTLVTINP 295
+ + F L T+ + + +D ++E++ E + P
Sbjct: 346 EGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDD---------------P 390
Query: 296 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMME 334
+P + KA+ LGWEPK L + +M++
Sbjct: 391 HKRKP--------DITKAKELLGWEPKVALRQGLPLMVK 421
>gi|6706608|emb|CAB65990.1| (AL035693) dJ33B19.1
(GDP-D-mannose-4,6-dehydratase) [Homo sapiens]
Length = 81
Score = 64.4 bits (154), Expect = 1e-09
Identities = 38/82 (46%), Positives = 51/82 (61%), Gaps = 8/82 (9%)
Query: 15 DGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHL-----VEY-DLTDLSS 68
DG+YLA+ LLE GY V+G RRSSS N RI L ++P+ H+ + Y DLTD +
Sbjct: 1 DGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHL--YKNPQAHIEGNMKLHYGDLTDSTC 58
Query: 69 SVRLLELAAPKEVYNLAAQSFV 90
V+++ P E+YNL AQS V
Sbjct: 59 LVKIINEVKPTEIYNLGAQSHV 80
>gi|6522623|emb|CAB62035.1| (AL133298) dTDP-glucose
4-6-dehydratases-like protein [Arabidopsis thaliana]
Length = 341
Score = 64.0 bits (153), Expect = 2e-09
Identities = 83/341 (24%), Positives = 136/341 (39%), Gaps = 47/341 (13%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMG---YVVYGTYRRSSSLNFWRINELGIAQHPKLHLV 59
N +I+G G G++L L+E +V Y S N + HP+ L+
Sbjct: 28 NMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKW-----IGHPRFELI 82
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
+D+T+ L+E+ ++Y+LA + P+ T +G +N+L + V
Sbjct: 83 RHDVTE----PLLIEV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 135
Query: 120 PKIRFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIF 174
+I STSE++G PQ E P RS Y K A + +Y +GI
Sbjct: 136 ARILL--TSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 193
Query: 175 AASGILFNHESPLRARDFVTRKITHAIAMIKLGK-LDVLKLGNLDAKRDWGFAKEYVDGM 233
+FN P D R +++ IA G+ L V K G R + + + VDG+
Sbjct: 194 IRIARIFNTYGPRMNIDD-GRVVSNFIAQALRGEALTVQKPGT--QTRSFCYVSDMVDGL 250
Query: 234 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 293
R+++ D+ + T+ + ++ +E K +V
Sbjct: 251 MRLMEGDDTGPINIGNPGEFTMVELAETVKELINPSIEIK----------------MVEN 294
Query: 294 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMME 334
P R + D+ KA+ LGWEPK L E +M E
Sbjct: 295 TPDDPRQRKPDI-----TKAKEVLGWEPKVKLREGLPLMEE 330
>gi|3513739 (AF080118) Similar to uridine diphosphate glucose
epimerase; F8M12.10 [Arabidopsis thaliana]
Length = 350
Score = 64.0 bits (153), Expect = 2e-09
Identities = 76/342 (22%), Positives = 145/342 (42%), Gaps = 33/342 (9%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY 61
++ +++G G G++ LL GY VV SS+++ R+ +L +L +
Sbjct: 3 RNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQV 62
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
DL D S+ ++ V + A VG S ++PL + VG + LLE + K
Sbjct: 63 DLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCK 122
Query: 122 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA-SGIL 180
+ +S++ ++G ++ P EE P +PYG KL+ + R+ YG IL
Sbjct: 123 NLVF-SSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEIC---RDVYGSDPEWKIIL 178
Query: 181 FNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAKEYV 230
+ +P+ A + + + + +G+ L + GN +D ++Y+
Sbjct: 179 LRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYI 238
Query: 231 DGMWRMLQADEPDTFVLATNRTETVR---DFVSLAASAVDIQLEWKGQAERECGVDVASG 287
+ D D + A + E + + +L LE E+ ASG
Sbjct: 239 HVI------DLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEK------ASG 286
Query: 288 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
K + + RP + +++ + +A ++L W+ K +EE+C
Sbjct: 287 KKIPLVIAG-RRPGDAEVVYASTERAESELNWKAKYGIEEMC 327
>gi|585828|sp|P37761|RFBB_NEIGO DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|628590|pir||S47045 dTDP-D-glucose 4,6-dehydratase -
Neisseria gonorrhoeae >gi|520896|emb|CAA83652| (Z32742)
dTDP-D-glucose 4,6-dehydratase [Neisseria gonorrhoeae]
>gi|1333793|emb|CAA79718| (Z21508) dTDP-D-glucose
4,6-dehydratase [Neisseria gonorrhoeae]
Length = 346
Score = 63.6 bits (152), Expect = 2e-09
Identities = 79/341 (23%), Positives = 140/341 (40%), Gaps = 39/341 (11%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELG-------IAQHPKL 56
K+ ++TG G G+ + + +++ T R S +N ++ G IA +P+
Sbjct: 7 KNILVTGGAGFIGSAVVR------HIIQNT--RDSVVNLDKLTYAGNLESLTDIADNPRY 58
Query: 57 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
+ D+ D + R+ P V +LAA+S V + VG +LLEA R
Sbjct: 59 AFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAAR 118
Query: 117 IV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVN 166
RF+ ST E++G + T + E TP+ P SPY +K A +
Sbjct: 119 AYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRA 178
Query: 167 YRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFA 226
++ +Y + I+ N + R F + I I GK + G+ RDW F
Sbjct: 179 WQRTYRL---PSIVSNCSNNYGPRQFPEKLIPLMILNALSGK-PLPVYGDGAQIRDWLFV 234
Query: 227 KEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA 285
+++ +++++ + +T+ + + +T + V + ++ + E VA
Sbjct: 235 EDHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLE-------ELAPEKPAGVA 287
Query: 286 SGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
+ L+T RP + AK R LGW P T E
Sbjct: 288 RYEDLITFVQD--RPGHDARYAVDAAKIRRDLGWLPLETFE 326
>gi|96686|pir||B33604 rfbE protein - Salmonella sp
Length = 348
Score = 62.8 bits (150), Expect = 4e-09
Identities = 55/207 (26%), Positives = 85/207 (40%), Gaps = 27/207 (13%)
Query: 7 VITGITGQDGAYLAQLLLEMGY---VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
+ITG G G+ LA L G V R+ ++ N ++ LG V D+
Sbjct: 4 LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG-----NFEFVHGDI 58
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
+ + RL+ P ++LA Q + S D P +I G +NLLEA+R N
Sbjct: 59 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 118
Query: 124 FYQASTSEMFGKVQQTPQIEETPFYP----------------RSPYGIAKLYAHWMTVNY 167
+ST++++G ++Q E Y SPYG +K A ++Y
Sbjct: 119 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 178
Query: 168 RESYGIFAASGILFNHESPLRARDFVT 194
IF + ++F H S R F T
Sbjct: 179 AR---IFGLNTVVFRHSSMYGGRQFAT 202
>gi|1350580|sp|P14169|RFBE_SALTI CDP-TYVELOSE-2-EPIMERASE >gi|861175
(M29682) CDP-tyvelose epimerase [Salmonella enterica]
Length = 338
Score = 62.8 bits (150), Expect = 4e-09
Identities = 55/207 (26%), Positives = 85/207 (40%), Gaps = 27/207 (13%)
Query: 7 VITGITGQDGAYLAQLLLEMGY---VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
+ITG G G+ LA L G V R+ ++ N ++ LG V D+
Sbjct: 4 LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG-----NFEFVHGDI 58
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
+ + RL+ P ++LA Q + S D P +I G +NLLEA+R N
Sbjct: 59 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 118
Query: 124 FYQASTSEMFGKVQQTPQIEETPFYP----------------RSPYGIAKLYAHWMTVNY 167
+ST++++G ++Q E Y SPYG +K A ++Y
Sbjct: 119 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 178
Query: 168 RESYGIFAASGILFNHESPLRARDFVT 194
IF + ++F H S R F T
Sbjct: 179 AR---IFGLNTVVFRHSSMYGGRQFAT 202
>gi|3256817|dbj|BAA29500| (AP000002) 336aa long hypothetical
dTDP-glucose 4,6-dehydratase [Pyrococcus horikoshii]
Length = 336
Score = 62.8 bits (150), Expect = 4e-09
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
Query: 54 PKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLE 113
P+ V+ D+ D L+ V +LAA+S V S P +G LLE
Sbjct: 54 PRYTFVKGDVADYELVKELVRKV--DGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLE 111
Query: 114 AIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
+IR NP++RF ST E++G + + E P SPY K + + + + +Y +
Sbjct: 112 SIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNL 171
Query: 174 FAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYV 230
A+ N+ P + F + I I LG L + G RDW + +++V
Sbjct: 172 NASITRCTNNYGPYQ---FPEKLIPKTIIRASLG-LKIPIYGTGKNVRDWLYVEDHV 224
>gi|4539118|emb|CAB39839.1| (AL049491) putative dTDP-(glucose or
rhamnose)-4,6-dehydratase [Mycobacterium leprae]
Length = 331
Score = 62.5 bits (149), Expect = 5e-09
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 56 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
+ LV+ ++TD RL+ A V + AA++ V + D P +G +LEA+
Sbjct: 51 VRLVQGNITDTKLVFRLV--AESDVVVHFAAETHVDNALDDPEPFLRTNVIGTFTILEAV 108
Query: 116 RIVNPKIRFYQASTSEMFGKVQ---QTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYG 172
R + +R + ST E++G ++ T E TP+ P SPY K + + SYG
Sbjct: 109 R--HHSVRLHHISTDEVYGDLELDEPTRFTESTPYNPSSPYSATKAAGDMLVRAWVRSYG 166
Query: 173 IFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVD 231
+ A N+ P + F+ R+IT+ + G+ L G RDW ++
Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVLT----GRRPKL-YGTGVNVRDWIHVDDHNS 221
Query: 232 GMWRMLQ 238
+W++L+
Sbjct: 222 AVWQILE 228
>gi|4574160|gb|AAD23919.1|AF083467_3 (AF083467) dTDP-D-glucose
4,6-dehydratase [Neisseria meningitidis]
Length = 341
Score = 62.1 bits (148), Expect = 7e-09
Identities = 68/291 (23%), Positives = 118/291 (40%), Gaps = 30/291 (10%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
IA +P+ + D+ D + R+ P V +LAA+S V S VG
Sbjct: 47 IADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTF 106
Query: 110 NLLEAIRIVNPKI--------RFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 159
NLLEA R ++ RF+ ST E++G + T + E P+ P SPY +K
Sbjct: 107 NLLEAARAYRQQMPSEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKAS 166
Query: 160 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKL---GN 216
+ + + +YG+ N+ P + I ++ L LD L G+
Sbjct: 167 SDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-------KLIPLMILNALDGKPLPVYGD 219
Query: 217 LDAKRDWGFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQ 275
RDW F +++ +++++ + +T+ + + + + V + ++ +
Sbjct: 220 GMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLE-------E 272
Query: 276 AERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
E VA + L+T RP + AK R LGW+P T E
Sbjct: 273 LAPEKPAGVARYEDLITFVQD--RPGHDARYAVDTAKIRRDLGWQPLETFE 321
>gi|2621713 (AE000844) UDP-glucose 4-epimerase [Methanobacterium
thermoautotrophicum]
Length = 325
Score = 61.7 bits (147), Expect = 9e-09
Identities = 82/342 (23%), Positives = 133/342 (37%), Gaps = 55/342 (16%)
Query: 7 VITGITGQDGAYLAQLLLEMGY---VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
+I G G G+++ + L E GY ++ R W +E +L
Sbjct: 3 LIVGGAGYIGSHVNKFLSERGYETLILDNLTRGHRDFVKWG------------EFIEGNL 50
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
D R E V + AA + VG S +P V +NLL+++ V+ +R
Sbjct: 51 GDRRLLDRTFETHDVDAVMHFAAFTDVGESVLKPGRYYHNNVVNTINLLDSM--VDHGVR 108
Query: 124 -FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 182
F +ST ++G + P EE P P SPYG +KL + +YR++YG+ S FN
Sbjct: 109 DFIFSSTCAVYGNPMEIPISEEHPLNPISPYGRSKLMVEEILGDYRDAYGLNYVSLRYFN 168
Query: 183 --HESPLRARDFVTRKITHAIAM---IKLGKLDVLKLGNLD-------AKRDWGFAKEYV 230
P + TH I + + LG D +++ D RD+ +
Sbjct: 169 AAGADPEGEVGELHNPETHLIPIVLDVALGLRDAVRIFGTDYPTPDGTCVRDYIHVMDLA 228
Query: 231 DGMW---RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASG 287
D W R L+ E F L +V + + +G
Sbjct: 229 DAHWRALRYLEGGESGVFNLGNGNGFSVMEVIETCRE--------------------VTG 268
Query: 288 KTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPK-TTLEEL 328
++ + RP + L+G+ +AR LGW P+ T LE++
Sbjct: 269 ASINAVEDD-RRPGDPPELVGSAGRARRVLGWRPEFTELEDI 309
>gi|418374|sp|P33119|GALE_CORDI UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|144973 (M34239) ORF3 [Corynebacterium diphtheriae]
>gi|144977 (M80338) open reading frame [Corynebacterium
diphtheriae]
Length = 328
Score = 61.7 bits (147), Expect = 9e-09
Identities = 79/323 (24%), Positives = 144/323 (44%), Gaps = 29/323 (8%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
++TG G G+ + +LLE G+ V T + + LG VE D+ D+
Sbjct: 4 LVTGGAGYVGSVCSTVLLEQGHEV--TIVDNLTTGNRDAVPLGAT------FVEGDIKDV 55
Query: 67 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 126
+ +V L + V + AA+S VG S ++P V + LL+A++ N + +
Sbjct: 56 AENV--LSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVRNIVF- 112
Query: 127 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHESP 186
+ST+ +G+ + P E+ P +P +PYG KL + +Y +YG FAA+ + + + +
Sbjct: 113 SSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYG-FAATSLRYFNVAG 171
Query: 187 LRARDFVTRKI-THAIAM---IKLGKLD-VLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 241
R+I TH I + + LG D + G+ D ++Y+ + +
Sbjct: 172 AYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYI----HIRDLAD 227
Query: 242 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 301
L +N + R F + ++ Q C +V + P+ R
Sbjct: 228 AHILALQSNVEGSHRIFNLGSGEGYSVK-----QVIDTCR-EVTGHPIPAEVAPR--RAG 279
Query: 302 EVDLLIGNPAKARTKLGWEPKTT 324
+ +LI + AKA+++LGW+P+ T
Sbjct: 280 DPAVLIASSAKAQSELGWKPQRT 302
>gi|3033515|gb|AAC12869.1| (AF044332)
dTDP-D-glucose-4,6-dehydratase; RffG [Erwinia carotovora
subsp. atroseptica]
Length = 357
Score = 61.3 bits (146), Expect = 1e-08
Identities = 77/340 (22%), Positives = 134/340 (38%), Gaps = 31/340 (9%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLL---EMGYVVYGTYRRSSSLNFWRINELGIAQHPKLH 57
M K +ITG G G+ L + +L + VV + +L+ + +A +
Sbjct: 1 MALKRILITGGAGFIGSALVRYILAETQDSVVVVDKLTYAGNLS----SLAPVADSSRFA 56
Query: 58 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR- 116
+ D+ D + R+ P V +LAA+S V S D P + VG +LEA R
Sbjct: 57 FEQVDICDRAELDRVFTAYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARH 116
Query: 117 -------IVNPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVNY 167
RF+ ST E+FG + T + E TP+ P SPY +K + + +
Sbjct: 117 YWQNLADADKNAFRFHHISTDEVFGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAW 176
Query: 168 RESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAK 227
+YG N+ P F + I I GK + G+ RDW F +
Sbjct: 177 LRTYGFPTVITNCSNNYGPYH---FPEKLIPLVILNAVAGK-PLPVYGDGAQIRDWLFVE 232
Query: 228 EYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVAS 286
++ +++++ + + +T+ + + + V + ++ + VA
Sbjct: 233 DHARALYKVVTEGEVGETYNIGGHNERKNIEVVQTICALLE-------ELAPNKPAGVAH 285
Query: 287 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
+ L+T RP + K +LGW P+ T E
Sbjct: 286 YRDLITYVKD--RPGHDMRYAIDAGKIERELGWRPEETFE 323
>gi|3927825|gb|AAC79582.1| (AC005727) putative nucleotide-sugar
dehydratase [Arabidopsis thaliana]
Length = 343
Score = 60.9 bits (145), Expect = 2e-08
Identities = 79/341 (23%), Positives = 132/341 (38%), Gaps = 47/341 (13%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMG---YVVYGTYRRSSSLNFWRINELGIAQHPKLHLV 59
N ++TG G G++L L++ +V Y S N + HP+ L+
Sbjct: 30 NMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKW-----IGHPRFELI 84
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
+D+T+ ++Y+LA + P+ T +G +N+L + V
Sbjct: 85 RHDVTEPL-------FVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 137
Query: 120 PKIRFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIF 174
+I STSE++G PQ E P RS Y K A + +Y +GI
Sbjct: 138 ARILL--TSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 195
Query: 175 AASGILFNHESPLRARDFVTRKITHAIAMIKLGK-LDVLKLGNLDAKRDWGFAKEYVDGM 233
+FN P D R +++ IA G+ L V K G R + + + V+G+
Sbjct: 196 IRIARIFNTYGPRMNIDD-GRVVSNFIAQALRGEALTVQKPGT--QTRSFCYVSDMVEGL 252
Query: 234 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 293
R+++ D+ + T+ + + +E K +V
Sbjct: 253 MRLMEGDQTGPINIGNPGEFTMVELAETVKELIKPDVEIK----------------MVEN 296
Query: 294 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMME 334
P R + D+ +KA+ LGWEPK L E +M E
Sbjct: 297 TPDDPRQRKPDI-----SKAKEVLGWEPKVKLREGLPLMEE 332
>gi|1710103|sp|P55294|RFBB_NEIME DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|388933 (L09188) TDP-glucose-dehydratase [Neisseria
meningitidis]
Length = 360
Score = 60.5 bits (144), Expect = 2e-08
Identities = 69/291 (23%), Positives = 117/291 (39%), Gaps = 30/291 (10%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
IA +P+ + D+ D + R+ P V +LAA+S V S VG
Sbjct: 52 IADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTF 111
Query: 110 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 159
NLLEA R + RF+ ST E++G + T + E TP+ P SPY +K
Sbjct: 112 NLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAS 171
Query: 160 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKL---GN 216
+ + + +YG+ N+ P + I ++ L LD L G+
Sbjct: 172 SDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-------KLIPLMILNALDGKPLPVYGD 224
Query: 217 LDAKRDWGFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQ 275
RDW F +++ +++++ + +T+ + + + + V + ++ +
Sbjct: 225 GMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICTLLE-------E 277
Query: 276 AERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
E VA + L+T RP + AK R LGW P T E
Sbjct: 278 LVPEKPAGVARYEDLITFVQD--RPGHDVRYAVDAAKIRRDLGWLPLETFE 326
>gi|421103|pir||S30682 hypothetical protein o355 - Escherichia coli
>gi|148191 (M87049) possibly rffE;
(UDP-GlcNAc-2-epimerase) [Escherichia coli]
Length = 355
Score = 60.1 bits (143), Expect = 3e-08
Identities = 48/195 (24%), Positives = 79/195 (39%), Gaps = 14/195 (7%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
+AQ + + D+ D + R+ P V +LAA+S V S D P + VG
Sbjct: 47 VAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTY 106
Query: 110 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 159
LLEA R RF+ ST E++G + T E TP+ P SPY +K
Sbjct: 107 TLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKAS 166
Query: 160 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 219
+ + + +YG+ N+ P K+ + + L + GN
Sbjct: 167 SDHLVRAWLRTYGLPTLITNCSNNYGPYH----FPEKLIPLMILNALAGKSLPVYGNGQQ 222
Query: 220 KRDWGFAKEYVDGMW 234
RDW + +++ ++
Sbjct: 223 IRDWLYVEDHARALY 237
>gi|2072420 (U75690) GDP-D-mannose dehydratase [Anabaena PCC7120]
Length = 76
Score = 60.1 bits (143), Expect = 3e-08
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH---PKLHLV 59
NK A+ITGITGQDG+YL++ L+E GY V+G RR+S+ N RI+ + H +L L
Sbjct: 4 NKRALITGITGQDGSYLSEFLIEQGYEVHGIIRRTSTFNTDRIDHIYEDPHQEGARLFLH 63
Query: 60 EYDLTD 65
DLTD
Sbjct: 64 YGDLTD 69
>gi|2506450|sp|P27830|RFFG_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|6729762|pdb|1BXK|A Chain A, Dtdp-Glucose
4,6-Dehydratase From E. Coli >gi|6729763|pdb|1BXK|B
Chain B, Dtdp-Glucose 4,6-Dehydratase From E. Coli
>gi|1790223 (AE000455) dTDP-glucose 4,6-dehydratase
[Escherichia coli]
Length = 355
Score = 60.1 bits (143), Expect = 3e-08
Identities = 48/195 (24%), Positives = 79/195 (39%), Gaps = 14/195 (7%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
+AQ + + D+ D + R+ P V +LAA+S V S D P + VG
Sbjct: 47 VAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTY 106
Query: 110 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 159
LLEA R RF+ ST E++G + T E TP+ P SPY +K
Sbjct: 107 TLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKAS 166
Query: 160 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 219
+ + + +YG+ N+ P K+ + + L + GN
Sbjct: 167 SDHLVRAWLRTYGLPTLITNCSNNYGPYH----FPEKLIPLMILNALAGKSLPVYGNGQQ 222
Query: 220 KRDWGFAKEYVDGMW 234
RDW + +++ ++
Sbjct: 223 IRDWLYVEDHARALY 237
>gi|2708270 (U78089) UDP-glucose epimerase [Brucella abortus]
Length = 335
Score = 60.1 bits (143), Expect = 3e-08
Identities = 78/343 (22%), Positives = 141/343 (40%), Gaps = 40/343 (11%)
Query: 7 VITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 64
++TG G G++ L+E G+ VV + S RI ++ + P+ D+
Sbjct: 4 LVTGGAGYIGSHTCVQLIEAGHEVVVVDNFDNSHPEALHRIEKI-TGRAPRRE--PGDIR 60
Query: 65 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 124
D + ++++ V + A VG S ++PL D +G + LL+A+ K +
Sbjct: 61 DRALMEQVIKRHKCTAVIHFAGLKAVGESSEKPLLYYDCNVLGTLRLLQAMEATGVK-KL 119
Query: 125 YQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LFN- 182
+S++ ++G + P E+ P +PYG KL M + S +A + + FN
Sbjct: 120 VFSSSATVYGDPDKLPITEDQPLSATNPYGRTKLVIEDMLRDLYNSDNSWAIAILRYFNP 179
Query: 183 ---HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLD-------AKRDWGFAKEYV 230
HES L D + + IA + G+ + L + D RD+ +
Sbjct: 180 VGAHESGLIGEDPKGIPNNLMPIIAQVATGRREKLNIWGNDYPTPDGTGVRDYIHVNDLA 239
Query: 231 DGMWRMLQA-DEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKT 289
G + L+ D+P F + + S +D+ ++ + RE ++A
Sbjct: 240 AGHLKALKKLDKPKCFAVNLGTGQ--------GYSVLDVIKAFEHVSNREIKYEIA---- 287
Query: 290 LVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMM 332
P+ RP +V +P A+ LGW + L E+C M
Sbjct: 288 -----PR--RPGDVAECYADPGFAKKFLGWSAEKNLREMCQDM 323
>gi|2104387|emb|CAB08730| (Z95390) rmlB [Mycobacterium tuberculosis]
Length = 331
Score = 59.7 bits (142), Expect = 3e-08
Identities = 43/150 (28%), Positives = 71/150 (46%), Gaps = 8/150 (5%)
Query: 56 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
+ LV+ D+TD +L+ A V + AA+S V + D P +G +LEA+
Sbjct: 51 IRLVQGDITDAELVSQLV--AESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAV 108
Query: 116 RIVNPKIRFYQASTSEMFGKVQQTPQI---EETPFYPRSPYGIAKLYAHWMTVNYRESYG 172
R +R + ST E++G ++ + E TP+ P SPY K A + + SYG
Sbjct: 109 R--RHGVRLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYG 166
Query: 173 IFAASGILFNHESPLR-ARDFVTRKITHAI 201
+ A N+ P + F+ R+IT+ +
Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNVL 196
>gi|2738953 (AF021920) GDP-D-mannose dehydratase homolog [Brucella
abortus] >gi|2827432 (AF043475) GDP-D-mannose
dehydratase [Brucella melitensis]
Length = 53
Score = 59.7 bits (142), Expect = 3e-08
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
LTD SS VR+++L P EVYNL AQS V VSF++P T + +GA+ LLEAI
Sbjct: 1 LTDTSSLVRIMQLVRPDEVYNLGAQSHVAVSFEEPEYTANSDALGALRLLEAI 53
>gi|6015647|emb|CAB57474.1| (Y18930) dTDP-glucose 4,6-dehydratase
(rfbB) [Sulfolobus solfataricus]
Length = 317
Score = 59.3 bits (141), Expect = 5e-08
Identities = 52/180 (28%), Positives = 82/180 (44%), Gaps = 15/180 (8%)
Query: 55 KLHLVEYDLTDLSSSVR------LLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGA 108
K +L+ D + + VR +++ +P V N AA++ V S +P +G
Sbjct: 39 KENLIGTDYDFVQADVRSEKMHDIIKEYSPDIVINFAAETHVDRSIYKPQDFVTTNVLGT 98
Query: 109 VNLLEAIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYR 168
VNLLEA R N ++ ST E++G + E +P P SPY +K A Y
Sbjct: 99 VNLLEASRKFN--FKYVHISTDEVYG---EECGDENSPLKPSSPYSASKASADLFVKAYV 153
Query: 169 ESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKE 228
+YGI S ++ + R F + I AI LG + + G+ A+RDW F ++
Sbjct: 154 RTYGI---SAVIVRPSNNYGPRQFPEKLIPKAIIRTLLG-IHIPVYGDGKAERDWIFVED 209
>gi|604222 (U09349) UDP-glucose 4-epimerase [Azospirillum
brasilense]
Length = 338
Score = 58.9 bits (140), Expect = 6e-08
Identities = 81/339 (23%), Positives = 133/339 (38%), Gaps = 59/339 (17%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
+ ++TG G G++ LL+ G+ VV R+ +A VE D
Sbjct: 6 TVLVTGGAGYVGSHCVAELLDRGFRVVVLDNLRQGHR----------VAVPSDAAFVEAD 55
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
L D+ + R+ V++ AA S VG S P V ++NL+ A +
Sbjct: 56 LADMDALTRVFAEWRFDAVFHFAALSLVGESMRDPHLYLHGNTVNSLNLIRAATTAGVRK 115
Query: 123 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLY----AHWMTVNYRESYGIFAASG 178
+ +ST+ +FG ++ P EET P SPYG +K + HW +G+ +A
Sbjct: 116 MVF-SSTANLFGTPERLPIDEETTIDPGSPYGESKFFIERALHWAD----RCHGLRSACL 170
Query: 179 ILFN----HESPLRARDFVTRKITHAIAMI----KLGKLDVLKLGNLDAKRDWGFAKEYV 230
FN H + D TH I ++ G+ + G+ D ++Y+
Sbjct: 171 RYFNAAGAHPNGTLGEDHAPE--THLIPLVLDAPAAGRSHIEIFGDDYPTADGTCVRDYI 228
Query: 231 ------DGMWRMLQADEP-DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 283
D R+L A E F L +VR+ ++ ER G+
Sbjct: 229 HVCDLADAHLRVLPALETRSRFNLGNGTGYSVREVIA--------------ATERVTGLT 274
Query: 284 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPK 322
V V + P+ R + +LI + + R +LGW P+
Sbjct: 275 VP-----VRVGPR--RAGDPAVLIASSERIRGELGWSPR 306
>gi|1730193|sp|P55180|GALE_BACSU UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1429254|emb|CAA67713| (X99339) UDP-glucose
4-epimerase [Bacillus subtilis]
>gi|1783241|dbj|BAA11718| (D83026) highly homologous to
UDP-glucose 4-epimerases (SwissProt:GALE_HAEIN and
GALE_ECOLI); hypothetical [Bacillus subtilis]
>gi|2636421|emb|CAB15912| (Z99123) UDP-glucose
4-epimerase [Bacillus subtilis]
Length = 339
Score = 58.9 bits (140), Expect = 6e-08
Identities = 79/337 (23%), Positives = 133/337 (39%), Gaps = 33/337 (9%)
Query: 7 VITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 64
++TG G G++ LL GY VV SS+ R+ E+ L E DL
Sbjct: 4 LVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEI---TGKDLTFYEADLL 60
Query: 65 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 124
D + + + V + A VG S PL G L EA+ K +
Sbjct: 61 DREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGVK-KI 119
Query: 125 YQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHE 184
+S++ ++G + +P E+ P +PYG KL + + + ++ + L +
Sbjct: 120 VFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLHTADNEWSVA--LLRYF 177
Query: 185 SPLRAR---------DFVTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAKEYVDGMW 234
+P A + + + +A + +GKL+ L + GN +D ++Y+
Sbjct: 178 NPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGVRDYI---- 233
Query: 235 RMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTIN 294
++ E L T D +L LE E+ G +V
Sbjct: 234 HVVDLAEGHVKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPY-------- 285
Query: 295 PKFY--RPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
+F RP ++ +PAKA+ +LGWE K LEE+C
Sbjct: 286 -RFADRRPGDIATCFADPAKAKRELGWEAKRGLEEMC 321
>gi|1653034|dbj|BAA17951| (D90910) UDP-glucose 4-epimerase
[Synechocystis sp.]
Length = 338
Score = 58.9 bits (140), Expect = 6e-08
Identities = 64/258 (24%), Positives = 104/258 (39%), Gaps = 38/258 (14%)
Query: 81 VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQASTSEMFGKVQQTP 140
V + AA VG S +P VG + LLEA+ K +F +ST ++G ++ P
Sbjct: 75 VMHFAAFIAVGESVQKPDIYYQNNVVGTLTLLEAMLAAGIK-KFVFSSTCAVYGMPKEIP 133
Query: 141 QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHE--SPLRARDFVTRKIT 198
E P P SPY +K + ++ ++YG + FN P T
Sbjct: 134 MTESHPIDPLSPYAASKRMVEQILADFDQAYGFKSVIFRYFNASGADPQGRLGEDHNPET 193
Query: 199 HAIAMIKLGKL---DVLKLGNLD-------AKRDW----GFAKEYVDGMWRMLQADEPDT 244
H I + L L L + D A RD+ A +V G+ +L+ E +
Sbjct: 194 HLIPLALLTALKQRPQLSVFGTDYDTLDGTALRDYIHVCDLAIAHVLGLQYLLEGGESNI 253
Query: 245 FVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEVD 304
F L +VR + +A + + + ++ + P+ RP +
Sbjct: 254 FNLGNGNGFSVRQVIEVAKAVTGLDIPYQ-------------------LCPR--RPGDAP 292
Query: 305 LLIGNPAKARTKLGWEPK 322
+L+G+ AKAR LGW P+
Sbjct: 293 ILVGSSAKAREILGWNPQ 310
>gi|2116765|dbj|BAA20116| (D86418) YfnG [Bacillus subtilis]
>gi|2633041|emb|CAB12547| (Z99107) similar to
CDP-glucose 4,6-dehydratase [Bacillus subtilis]
Length = 301
Score = 58.9 bits (140), Expect = 6e-08
Identities = 39/120 (32%), Positives = 64/120 (52%), Gaps = 2/120 (1%)
Query: 55 KLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEA 114
K+++V L DL+ R L V++LAAQ+ VGV+ P++T + +G N+LEA
Sbjct: 33 KMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEA 92
Query: 115 IRIVNPKI-RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
R +P I R AS+ + +G + P E P + PY ++K A ++ Y +YG+
Sbjct: 93 CR-KHPLIKRVIVASSDKAYGDQENLPYDENMPLQGKHPYDVSKSCADLISHTYFHTYGL 151
>gi|3832507 (AF097519) dTDP-D-glucose 4,6 dehydratase [Klebsiella
pneumoniae]
Length = 354
Score = 58.6 bits (139), Expect = 8e-08
Identities = 69/290 (23%), Positives = 117/290 (39%), Gaps = 27/290 (9%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
+A + + D+TD ++ P V +LAA+S V S D P +G
Sbjct: 46 VAGSERYSFSQTDITDAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIHTNVIGTF 105
Query: 110 NLLEAIR-----IVNPK---IRFYQASTSEMFG---KVQQTPQIEETPFYPRSPYGIAKL 158
LLEA R +V + RF+ ST E++G + Q T ++T + P SPY +K
Sbjct: 106 TLLEAARHYWSGLVEEQKQAFRFHHISTDEVYGDLHRSQSTCPPKKTSYAPSSPYSASKA 165
Query: 159 YAHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLD 218
+ + + +YG+ N+ P F + I I GK + GN +
Sbjct: 166 GSDHLVRAWNRTYGLPLVVTNCSNNYGPYH---FPEKLIPLTILNALAGK-PLPVYGNGE 221
Query: 219 AKRDWGFAKEYVDGMWRM-LQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAE 277
RDW + +E+ ++++ + +T+ + + D V + +D K A+
Sbjct: 222 QIRDWLYVEEHARALYKVATEGKSGETYNIGGHNERKNIDVVRTICTILD-----KVVAQ 276
Query: 278 RECGV-DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
+ + A T VT P +D K + LGW P+ T E
Sbjct: 277 KPGNITHFADLITFVTDRPGHDLRYAID-----ATKIQRDLGWVPQETFE 321
>gi|1143204 (U34305) ORF2; Method: conceptual translation supplied
by author. [Shigella sonnei]
Length = 341
Score = 58.2 bits (138), Expect = 1e-07
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 20/241 (8%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINEL-GIAQHPKLHLVE 60
K+ +ITG+ G G+ L + LL++ VV G + N + L Q + +E
Sbjct: 16 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE 75
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
D+ DL++ ++++ V + AA V S P+TT G +N+L A + N
Sbjct: 76 GDIRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK--NA 131
Query: 121 KIR-FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 179
+++ F A++S +G P++EE P SPY + K Y +YG+
Sbjct: 132 QVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGVKTIGLR 191
Query: 180 LFN----HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 235
FN + P A V K T A+ L DV G+ + RD+ Y+D + +
Sbjct: 192 YFNVFGRRQDPNGAYAAVIPKWTAAM----LKGDDVYINGDGETSRDFC----YIDNVIQ 243
Query: 236 M 236
M
Sbjct: 244 M 244
>gi|1173555 (U31544) UDP-galactose-4-epimerase [Pisum sativum]
Length = 350
Score = 57.8 bits (137), Expect = 1e-07
Identities = 74/342 (21%), Positives = 141/342 (40%), Gaps = 29/342 (8%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVV--YGTYRRSSSLNFWRINEL-GIAQHPKLHLV 59
++ ++TG G G + LL G+ V + S R+ E+ G L
Sbjct: 5 SQKILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFT 64
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
DL + +L + V + A VG S + P D VG +NL E + N
Sbjct: 65 LGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHN 124
Query: 120 PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 179
K + +S + ++G+ ++ P +E+ +PYG KL+ + + +++ + +
Sbjct: 125 CKKMVFSSSAT-VYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRI--V 181
Query: 180 LFNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLD-AKRDWGFAKEY 229
L + +P+ A + + + I + +G+L L + D RD ++Y
Sbjct: 182 LLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDY 241
Query: 230 VDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQL-EWKGQAERECGVDVASGK 288
+ M D D + A + T + + +A ++ E + ASGK
Sbjct: 242 IHVM------DLADGHIAALRKLFTSEN---IGCTAYNLGTGRGSSVLEMVAAFEKASGK 292
Query: 289 TL-VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
+ + + P+ RP + + + AKA +LGW+ K +EE+C
Sbjct: 293 KIALKLCPR--RPGDATEVYASTAKAEKELGWKAKYGVEEMC 332
>gi|1230585 (U47057) nucleotide sugar epimerase [Vibrio cholerae
O139] >gi|3724324|dbj|BAA33613.1| (AB012956) probable
nucleotide sugar epimerase [Vibrio cholerae]
>gi|1588979|prf||2209416J nucleotide sugar epimerase
[Vibrio cholerae]
Length = 334
Score = 57.8 bits (137), Expect = 1e-07
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 23/240 (9%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRIN----ELGIAQHPKLHLVEYD 62
++TG G G+ + L E G+ V G + +++ +N L +HP H ++ D
Sbjct: 4 LVTGAAGFIGSATVKKLTEQGHHVVGI---DNINDYYDVNLKHARLARIEHPLFHFLKVD 60
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D ++ +L E + V +LAAQ+ V S + P D VG +N+LE R N
Sbjct: 61 IADRAAMAQLFEQEKFERVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR-QNKVG 119
Query: 123 RFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
AS+S ++G + P ++ +P S Y K M +Y Y I +G+ F
Sbjct: 120 HLVYASSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLYDI-PTTGLRF 178
Query: 182 -----NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
+ P A T+KI A +D+ G D RD+ + V+G+ R+
Sbjct: 179 FTVYGSWGRPDMAPFIFTKKILAGEA------IDINNHG--DMWRDFTHVDDIVEGVVRI 230
>gi|1890603|emb|CAB01951| (Z79692) ExpA9 [Sinorhizobium meliloti]
Length = 356
Score = 57.8 bits (137), Expect = 1e-07
Identities = 61/288 (21%), Positives = 110/288 (38%), Gaps = 26/288 (9%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
+ P D+ D ++++ + +LAA+S V S + P + +G V
Sbjct: 46 VESDPHYAFYRADIRDEQVLLQIMRRERIDAIMHLAAESHVDRSIESPDPFMETNVLGTV 105
Query: 110 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 159
LL A + RF+ ST E+FG + I EET + P SPY +K
Sbjct: 106 RLLNAALAYWSGLGTEERGRFRFHHVSTDEVFGDLPFNRGIFSEETRYAPSSPYAASKAA 165
Query: 160 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 219
A + +YG+ N+ P + K+ + + + + G+
Sbjct: 166 ADHFARAWYHTYGLPVVVSNCSNNYGPFHFPE----KLIPLTIINAIEEKPLPLYGSGAN 221
Query: 220 KRDWGFAKEYVDGMWRMLQADEP-DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAER 278
RDW ++ + ++ P +++ + + +D++L KG
Sbjct: 222 VRDWLHVADHATALELVVSRGRPGESYNIGARAERNNLSVMECICDLLDVRLPRKGGD-- 279
Query: 279 ECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
S + L+T+ P RP +P+KA +LGW PK + E
Sbjct: 280 -------SYRDLITLVPD--RPGHDRRYAIDPSKAERELGWRPKRSFE 318
>gi|3721693|dbj|BAA33643.1| (AB012957) probable nucleotide sugar
epimerase [Vibrio cholerae]
Length = 334
Score = 57.8 bits (137), Expect = 1e-07
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 23/240 (9%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRIN----ELGIAQHPKLHLVEYD 62
++TG G G+ + L E G+ V G + +++ +N L +HP H ++ D
Sbjct: 4 LVTGAAGFIGSATVKKLTEQGHHVVGI---DNINDYYDVNLKHSRLARIEHPLFHFLKVD 60
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D ++ +L E + V +LAAQ+ V S + P D VG +N+LE R N
Sbjct: 61 IADRAAMAQLFEQEKFERVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR-QNKVG 119
Query: 123 RFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
AS+S ++G + P ++ +P S Y K M +Y Y I +G+ F
Sbjct: 120 HLVYASSSSVYGLNAKVPFATSDSVDHPVSLYAATKKSNELMAHSYSHLYDI-PTTGLRF 178
Query: 182 -----NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
+ P A T+KI A +D+ G D RD+ + V+G+ R+
Sbjct: 179 FTVYGSWGRPDMAPFIFTKKILAGEA------IDINNHG--DMWRDFTHVDDIVEGVVRI 230
>gi|2688351 (AE001149) nucleotide sugar epimerase [Borrelia
burgdorferi]
Length = 355
Score = 57.4 bits (136), Expect = 2e-07
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 25/251 (9%)
Query: 8 ITGITGQDGAYLAQLLLEMGYVVYGT------------YRRSSSLNFWR--INELGIAQH 53
+TGI G G ++A+ L+E G+ V G + R +L F + I +
Sbjct: 5 LTGIAGFIGFHVAKKLVEKGHEVLGIDVLNDYYELKFKHERLEALGFCSKDVKTHKIIKS 64
Query: 54 PKLHLVEYDLTDLSSSVRLLELAAPKE---VYNLAAQSFVGVSFDQPLTTTDITGVGAVN 110
K + + + D+ + +LLEL + V +LAAQ+ + S + P + I VG N
Sbjct: 65 EKYNNLSFAYLDILNKDKLLELFKDHKFTHVCHLAAQAGIRDSLENPDSYVSINIVGFFN 124
Query: 111 LLEAIRIVNPKI-RFYQASTSEMFGKVQQTPQIEET-PFYPRSPYGIAKLYAHWMTVNYR 168
+L+ R+ I F ASTS ++G + P E++ +P + Y +K M Y
Sbjct: 125 VLDVCRVYKENIEHFVYASTSSVYGINENMPSSEDSITDHPLNLYAASKKSNEMMAHAYS 184
Query: 169 ESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGK-LDVLKLGNLDAKRDWGFAK 227
S+ I F D + IK GK +++ GN+ RD+ +
Sbjct: 185 ASFNIPTTGLRFFTVYGTYGRPDMALYLFSDG---IKNGKAINIFNNGNM--ARDFTYVG 239
Query: 228 EYVDGMWRMLQ 238
+ DG++++L+
Sbjct: 240 DIADGVYKVLK 250
>gi|4234803|gb|AAD12971.1| (AF078135) RmlB [Leptospira
borgpetersenii]
Length = 349
Score = 57.4 bits (136), Expect = 2e-07
Identities = 78/336 (23%), Positives = 135/336 (39%), Gaps = 37/336 (11%)
Query: 4 KSAVITGITGQDGAYLAQLLL----EMGYVVYG--TYRRS-SSLNFWRINELGIAQHPKL 56
K ++TG G G+ L+L E +V+ TY + SL +W+ + P+
Sbjct: 2 KKILVTGGAGFIGSNFVNLILNENEEYQIIVFDKLTYAGNLKSLEYWK-------KDPRF 54
Query: 57 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
++ D+ + + + + V + AA+S V S P +G LL+A R
Sbjct: 55 IFIKADIANKENVFSIFQEHNFDYVAHFAAESHVDRSILGPEEFIKTNVLGTFYLLDAAR 114
Query: 117 IV----NPKIRFYQASTSEMFGKVQQTPQI-EETPFYPRSPYGIAKLYAHWMTVNYRESY 171
+ +F ST E+FG + T EETP+ P SPY +K + + +Y +Y
Sbjct: 115 LQWNGSYEGKKFLHVSTDEVFGTLGDTGYFTEETPYAPNSPYSASKAGSDHIVRSYYHTY 174
Query: 172 GIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVD 231
+ + N+ P F + I I GK + G+ RDW + K++ +
Sbjct: 175 HMPVVTTNCSNNYGPYH---FPEKLIPLTILNCLQGK-PLPVYGDGKNIRDWLYVKDHCE 230
Query: 232 GM-WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTL 290
+ + Q +T+ + T + D V+ S +D + G V K +
Sbjct: 231 ALRLALFQGLPGETYNIGTRNEKKNIDIVNSICSIMD-EFHPSG---------VPHSKLI 280
Query: 291 VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
+ RP +P+K +LGW+PK E
Sbjct: 281 QYVKD---RPGHDFRYAIDPSKIEKELGWKPKFVFE 313
>gi|1172921|sp|P44914|RFFG_HAEIN DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1075419|pir||C64099 UDP-N-acetylglucosamine
epimerase (rffE) homolog - Haemophilus influenzae
(strain Rd KW20) >gi|1573891 (U32769) DTDP-glucose
4,6-dehydratase (rffG) [Haemophilus influenzae Rd]
Length = 338
Score = 57.0 bits (135), Expect = 2e-07
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 14/198 (7%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
+ +P+ + D+ DL+ + E P V +LAA+S V S VG
Sbjct: 47 VENNPRYVFEKVDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTY 106
Query: 110 NLLEAIR--------IVNPKIRFYQASTSEMFG--KVQQTPQIEETPFYPRSPYGIAKLY 159
LLE + RF+ ST E++G + + E++P++P SPY +K
Sbjct: 107 TLLEVAKNYWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAA 166
Query: 160 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 219
++ + + +YG+ I+ N + A + I I+ +GK + G+
Sbjct: 167 SNHLVQAWHRTYGL---PVIITNSSNNYGAYQHAEKLIPLMISNAVMGK-PLPIYGDGQQ 222
Query: 220 KRDWGFAKEYVDGMWRML 237
RDW F +++V + +L
Sbjct: 223 IRDWLFVEDHVQASYLVL 240
>gi|1314581 (U51197) dTDP-D-glucose-4,6-dehydratase [Sphingomonas
S88]
Length = 353
Score = 57.0 bits (135), Expect = 2e-07
Identities = 80/332 (24%), Positives = 128/332 (38%), Gaps = 30/332 (9%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
++TG G G+ + + L+ G V + + + N + I P V D+ D
Sbjct: 6 LVTGGAGFIGSAVVRHLVRQGARVINLDKLTYAGNPASLT--AIENAPNYRFVHADIADT 63
Query: 67 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI-----RIVNPK 121
++ + LL V +LAA+S V S D P + VG LL+A + K
Sbjct: 64 ATILPLLREEQVDVVMHLAAESHVDRSIDGPGEFIETNVVGTFKLLQAALQYWRELEGEK 123
Query: 122 ---IRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
RF+ ST E+FG + I EETP+ P SPY +K + + + +YG+
Sbjct: 124 REAFRFHHISTDEVFGDLPFDSGIFTEETPYDPSSPYSASKAASDHLVRAWGHTYGLPVV 183
Query: 177 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
N+ P F + I I GK + G + RDW + ++ + +
Sbjct: 184 LSNCSNNYGPFH---FPEKLIPLTILNALEGK-PLPVYGKGENIRDWLYVDDHAKALATI 239
Query: 237 LQADEPDTFVLATNRTE-TVRDFVSLAASAVDIQLEWK-GQAERECGVDVASGKTLVTIN 294
+ R E T V +D ++ K G+ RE T VT
Sbjct: 240 ATTGKVGQSYNVGGRNERTNLQVVETICDLLDQRIPLKDGKKRREL-------ITFVTDR 292
Query: 295 PKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
P R +D K T+LGW+ + +
Sbjct: 293 PGHDRRYAID-----ATKLETELGWKAEENFD 319
>gi|6009798|dbj|BAA85072.1| (AB028135) ORF2S [Shigella sonnei]
Length = 345
Score = 57.0 bits (135), Expect = 2e-07
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 20/241 (8%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINEL-GIAQHPKLHLVE 60
K+ +ITG+ G G+ L + LL++ VV G + N + L Q + +E
Sbjct: 20 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE 79
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
D+ DL++ ++++ V + AA V S P+TT G +N+L A + N
Sbjct: 80 GDIRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK--NA 135
Query: 121 KIR-FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 179
+++ F A++S +G P++EE P SPY + K Y +YG
Sbjct: 136 QVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLR 195
Query: 180 LFN----HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 235
FN + P A V K T A+ L DV G+ + RD+ Y+D + +
Sbjct: 196 YFNVFGRRQDPNGAYAAVIPKWTAAM----LKGDDVYINGDGETSRDFC----YIDNVIQ 247
Query: 236 M 236
M
Sbjct: 248 M 248
>gi|6009649|dbj|BAA85007.1| (AB025970) ORF2P [Plesiomonas
shigelloides]
Length = 345
Score = 57.0 bits (135), Expect = 2e-07
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 20/241 (8%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINEL-GIAQHPKLHLVE 60
K+ +ITG+ G G+ L + LL++ VV G + N + L Q + +E
Sbjct: 20 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE 79
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
D+ DL++ ++++ V + AA V S P+TT G +N+L A + N
Sbjct: 80 GDIRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK--NA 135
Query: 121 KIR-FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 179
+++ F A++S +G P++EE P SPY + K Y +YG
Sbjct: 136 QVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLR 195
Query: 180 LFN----HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 235
FN + P A V K T A+ L DV G+ + RD+ Y+D + +
Sbjct: 196 YFNVFGRRQDPNGAYAAVIPKWTAAM----LKGDDVYINGDGETSRDFC----YIDNVIQ 247
Query: 236 M 236
M
Sbjct: 248 M 248
>gi|2494660|sp|Q45291|GALE_BRELA UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|2144276|pir||JC5168 UDPglucose 4-epimerase (EC
5.1.3.2) - Brevibacterium lactofermentum
>gi|1161517|emb|CAA89986| (Z49823) UDP-galactose
4-epimease [Corynebacterium glutamicum]
Length = 329
Score = 56.6 bits (134), Expect = 3e-07
Identities = 77/322 (23%), Positives = 133/322 (40%), Gaps = 27/322 (8%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
++TG G G+ A +LLE G+ V + NF N + +L +E D+ D+
Sbjct: 4 LVTGGAGYVGSVRAAVLLEHGHDV------TIIDNFSTGNREAVPADARL--IEGDVNDV 55
Query: 67 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 126
V LLE + V + AA+S VG S ++P V A+ LL+A+R +
Sbjct: 56 VEEV-LLE-GGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVF- 112
Query: 127 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN---- 182
+ST+ +G+ P E+ P P + YG KL + +Y ++G+ A S FN
Sbjct: 113 SSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGA 172
Query: 183 HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEP 242
+ + R+ T I + + + + G+ D ++Y+ +L +
Sbjct: 173 YGNIGENREVETHLIPLVLQVATGHREKIFMFGDDWPTPDGTAVRDYI----HILDLAKA 228
Query: 243 DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAE 302
L +N R F + ++ Q C +V + P+ R +
Sbjct: 229 HVLALESNEAGKHRIFNLGSGDGYSVK-----QVVEMCR-EVTGHPIPAEVAPR--RAGD 280
Query: 303 VDLLIGNPAKARTKLGWEPKTT 324
LI + KA+ +LGW P+ T
Sbjct: 281 PATLIASSEKAKQELGWTPEHT 302
>gi|1098478 (L09189) dTDP-D-glucose 4,6-dehydratase [Neisseria
meningitidis]
Length = 355
Score = 56.6 bits (134), Expect = 3e-07
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 24/288 (8%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
IA +P+ + D+ D + R+ P V +LAA+S V S VG
Sbjct: 47 IADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTF 106
Query: 110 NLLEAIRIVNPKI--------RFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAKLY 159
NLLEA R ++ RF+ ST E++G + T + E P+ P SPY +K
Sbjct: 107 NLLEAARAYWQQMPSEQYEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKAS 166
Query: 160 AHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDA 219
+ + + +YG+ I+ N + F + I I GK + G+
Sbjct: 167 SDHLVRAWLRTYGL---PTIVTNCSNNYGLYHFPEKLIPLMILNALDGK-PLPVYGDGMQ 222
Query: 220 KRDWGFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAER 278
RDW F +++ +++++ + +T+ + + + + V + ++ +
Sbjct: 223 IRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLE-------ELAP 275
Query: 279 ECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
E VA + L+T RP + AK R LGW P T E
Sbjct: 276 EKPAGVARYEDLITFVQD--RPGHDVRYAVDAAKIRRDLGWLPLETFE 321
>gi|2622920 (AE000933) dTDP-glucose 4,6-dehydratase
[Methanobacterium thermoautotrophicum]
Length = 336
Score = 56.6 bits (134), Expect = 3e-07
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 46 NELGIAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITG 105
N G+ P+ V +TD +++ V N AA+S V S + P
Sbjct: 43 NLRGVEDEPRYTFVRGSITDRKLVDGIIKDV--DAVINFAAESHVDRSIEDPEIFIRTNI 100
Query: 106 VGAVNLLEAIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTV 165
+G LLEA R + RF Q ST E++G ++ EETP P SPY +K A M
Sbjct: 101 LGTQTLLEASRKHGVE-RFIQISTDEVYGSAEKGYFTEETPLAPNSPYSASKASADLMVR 159
Query: 166 NYRESYGI 173
Y +YG+
Sbjct: 160 AYHRTYGL 167
>gi|2983750 (AE000735) nucleotide sugar epimerase [Aquifex aeolicus]
Length = 321
Score = 56.6 bits (134), Expect = 3e-07
Identities = 76/325 (23%), Positives = 128/325 (39%), Gaps = 32/325 (9%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
++TG G G +++ LLE G+ V G +S + R+ E + Q K ++ ++
Sbjct: 4 LVTGCAGLIGWKVSEKLLEHGHRVIGVDNLNSYYDP-RLKEYRLEQLKKFENFKFYKVNI 62
Query: 67 SSSVRLLELAAPKE---VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
+ L L E V N AA++ V S P +G +NLLE ++ K +
Sbjct: 63 ENREALRILFQEFEFDAVINEAARAGVRYSIQNPHIYFTTNTLGNLNLLELMKEFGVK-K 121
Query: 124 FYQASTSEMFGKVQQTPQIEETPFY-PRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 182
ASTS ++ Q P EE P P SPY +K A Y YGI F
Sbjct: 122 LILASTSSLYAG-QPMPFKEELPVNTPISPYAASKKAAEVTAYTYHYLYGIDVVILRYFT 180
Query: 183 HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEP 242
D + L + + G+ KRD+ + + + + L
Sbjct: 181 VYGLAGRPDMAVFNFIYKT----LKGIPIKVYGDGSQKRDFTYVDDVAEATVKALNLKGY 236
Query: 243 DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAE 302
+ + N+ +++ + L ++ +GK + F++ A+
Sbjct: 237 EIINVGNNKPRALKELIEL--------------------IEKYTGKEVKVEYGDFHK-AD 275
Query: 303 VDLLIGNPAKARTKLGWEPKTTLEE 327
+ + KA+ LGWEPKT+LEE
Sbjct: 276 MRDTWADITKAKRLLGWEPKTSLEE 300
>gi|6469141|emb|CAB61752.1| (AJ275318) dTDP-glucose 4-6-dehydratase
[Cicer arietinum]
Length = 346
Score = 56.6 bits (134), Expect = 3e-07
Identities = 81/345 (23%), Positives = 135/345 (38%), Gaps = 48/345 (13%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMG---YVVYGTYRRSSSLNFWRINELGIAQHPKLHLV 59
N ++TG G G++L L+E +V Y S N + HP+ L+
Sbjct: 32 NMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKW-----IGHPRFELI 86
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
+D+T+ ++E+ ++Y+LA + P+ T +G +N+L + V
Sbjct: 87 RHDVTE----PLMIEV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
Query: 120 PKIRFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIF 174
+I STSE++G + PQ E P R+ Y K A + +Y +GI
Sbjct: 140 ARILL--TSTSEVYGDPLEHPQTESYWGNVNPNGVRNCYDEGKRVAETLMFDYHRQHGIE 197
Query: 175 AASGILFNHESPLRARDFVTRKITHAIAMIKLGK-LDVLKLGNLDAKRDWGFAKEYVDGM 233
+FN P D R +++ IA G+ L V G R + + + VDG+
Sbjct: 198 IRVARIFNTYGPRMNIDD-GRVVSNFIAQALRGESLTVQSPGT--QTRSFCYVSDLVDGL 254
Query: 234 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 293
R++ + L T+ + ++ +E K V
Sbjct: 255 IRLMGGSDTGPINLGNPGEFTMLELAETVKELINPNVEIK----------------TVEN 298
Query: 294 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVR 338
P R + D+ KA+ LGWEPK L + +ME D R
Sbjct: 299 TPDDPRQRKPDI-----TKAKELLGWEPKVKLRDGL-PLMEGDFR 337
>gi|3135690 (AF064070) putative UDP-glucose 4-epimerase
[Burkholderia pseudomallei]
Length = 340
Score = 56.2 bits (133), Expect = 4e-07
Identities = 80/349 (22%), Positives = 140/349 (39%), Gaps = 57/349 (16%)
Query: 7 VITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 64
++TG G G++ A LL GY V+ S RI ++ + P H E D++
Sbjct: 8 LVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI-TGKTPAFH--ETDVS 64
Query: 65 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI-- 122
D + R+ + + AA VG S +P+ + +LL +R++ +
Sbjct: 65 DERALARIFDAHPITAAIHFAALKAVGESVAKPI---EYYRNNLDSLLSLLRVMRERAVK 121
Query: 123 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LF 181
R +S++ ++G +++P E P +PYG KL A + + + + + + F
Sbjct: 122 RIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYF 181
Query: 182 N----HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLD-------AKRDW----G 224
N HES L D + + +A + +GKL+ L++ D RD+
Sbjct: 182 NPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVD 241
Query: 225 FAKEYVDGMWRMLQADEPDTFVLATNR----TETVRDFVSLAASAVDIQLEWKGQAEREC 280
A+ ++ + + + D T L T R E VR F + AV +L +
Sbjct: 242 LARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVAR------- 294
Query: 281 GVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
RP +V NPA A +GW+ + LE +C
Sbjct: 295 ------------------RPGDVAECYANPAAAAETIGWKAERDLERMC 325
>gi|2804685 (AF030359) dTDP-glucose-4,6-dehydratase [Streptococcus
pneumoniae] >gi|2804710 (AF030363)
dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae]
>gi|2804723 (AF030365) dTDP-glucose-4,6-dehydratase
[Streptococcus pneumoniae] >gi|2804729 (AF030366)
dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae]
>gi|3320401 (AF030373) dTDP-glucose-4,6-dehydratase
[Streptococcus pneumoniae] >gi|3818498 (AF057294)
Cps23fQ [Streptococcus pneumoniae]
>gi|4200435|gb|AAD10183.1| (AF026471) Cps2N
[Streptococcus pneumoniae]
Length = 349
Score = 56.2 bits (133), Expect = 4e-07
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 42/281 (14%)
Query: 59 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 118 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 165
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 166 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 224
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 225 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 283
++ G+W +L + +T+++ + + ++ + L L+ GQA
Sbjct: 229 HTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELI-------LKEMGQA------- 274
Query: 284 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 324
A VT +D +K R +LGW+P+ T
Sbjct: 275 -ADAYDHVTDRAGHDLRYAID-----ASKLRDELGWKPEFT 309
>gi|2804691 (AF030360) dTDP-glucose-4,6-dehydratase [Streptococcus
pneumoniae] >gi|2804697 (AF030361)
dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae]
>gi|2804704 (AF030362) dTDP-glucose-4,6-dehydratase
[Streptococcus pneumoniae] >gi|2804716 (AF030364)
dTDP-glucose-4,6-dehydratase [Streptococcus pneumoniae]
Length = 349
Score = 56.2 bits (133), Expect = 4e-07
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 42/281 (14%)
Query: 59 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 118 VNPKIRFYQASTSEMFGKVQQTPQI------------EETPFYPRSPYGIAKLYAHWMTV 165
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLLGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 166 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 224
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 225 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 283
++ G+W +L + +T+++ + + ++ + L L+ GQA
Sbjct: 229 HTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELI-------LKEMGQA------- 274
Query: 284 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 324
A VT +D +K R +LGW+P+ T
Sbjct: 275 -ADAYDHVTDRAGHDLRYAID-----ASKLRDELGWKPEFT 309
>gi|4406251|gb|AAD19915.1| (AF105113) dTDP-glucose-4,6-dehydratase
[Streptococcus pneumoniae]
Length = 348
Score = 56.2 bits (133), Expect = 4e-07
Identities = 62/281 (22%), Positives = 115/281 (40%), Gaps = 42/281 (14%)
Query: 59 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAALVDKLAAEADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 118 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 165
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGLGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 166 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 224
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 225 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 283
++ G+W +L + +T+++ + + ++ + L + + G D
Sbjct: 229 HTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADAYDHVTDRAGHD 288
Query: 284 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 324
+ + +K R +LGW+P+ T
Sbjct: 289 LRYAI--------------------DASKLRDELGWKPEFT 309
>gi|5104852|dbj|BAA80166.1| (AP000061) 330aa long hypothetical
dTDP-glucose 4,6-dehydratase [Aeropyrum pernix]
Length = 330
Score = 56.2 bits (133), Expect = 4e-07
Identities = 70/269 (26%), Positives = 108/269 (40%), Gaps = 28/269 (10%)
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
D+ D R+L P V N AA++ V S ++P +G +LEAIR +
Sbjct: 56 DIADEEQFGRVLTEFEPDVVVNFAAETHVDRSINEPAPFMRTNIIGVFTILEAIRKRIDQ 115
Query: 122 IRFYQASTSEMFGKVQQTPQ--IEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 179
I ST E++G + T + E P P SPY +K + Y +YG+
Sbjct: 116 IVLLHVSTDEVYGDLWNTGKEATESDPLNPSSPYSASKASGDLLIKAYGRTYGLKYRIVR 175
Query: 180 LFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQA 239
N+ P + V + I I I GK V+ G+ RDW + ++ + +L+
Sbjct: 176 PCNNYGPYQ---HVEKLIPRTIIRILHGKPPVI-YGDGSQIRDWLYVEDTARAIHVVLEK 231
Query: 240 D-EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 298
+ + + + TV+D V V+I LE G+ + GK+
Sbjct: 232 GVDGEIYNVCGGMASTVKDIV------VNI-LESMGKPRDY----LVYGKS--------- 271
Query: 299 RPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
RP E D LGW P TL+E
Sbjct: 272 RPGE-DRRYAMKCDKIRNLGWAPHVTLKE 299
>gi|1001273|dbj|BAA10518| (D64003) dTDP-glucose 4,6-dehydratase
[Synechocystis sp.]
Length = 342
Score = 56.2 bits (133), Expect = 4e-07
Identities = 70/284 (24%), Positives = 114/284 (39%), Gaps = 28/284 (9%)
Query: 54 PKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLE 113
P V+ D+ D +LL + + + AA+S V S P VG LLE
Sbjct: 54 PNFRFVQGDIGDRHLVDQLLREEQIETIAHFAAESHVDRSILGPGAFVQTNVVGTFTLLE 113
Query: 114 AIRIV-----NP-KIRFYQASTSEMFGKVQQTPQ----IEETPFYPRSPYGIAKLYAHWM 163
A R NP + RF ST E++G + TP E TP+ P SPY +K + +
Sbjct: 114 AFREHWQRRGNPAQFRFLHVSTDEVYGSL--TPNEPGFSETTPYSPNSPYSASKAGSDHL 171
Query: 164 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 223
Y +YG+ N+ P + + + + + +++ KL V G+ RDW
Sbjct: 172 VRAYFHTYGLPTLITNCSNNYGPYQFPEKLIPLM--CLNILRGEKLPV--YGDGQNVRDW 227
Query: 224 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 282
+ ++ + +L QA T+ + N + V + +D E
Sbjct: 228 LYVTDHCQALDLVLHQALPGATYNIGGNNEVKNIELVEILCDLMD-----------ELAP 276
Query: 283 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
D+ I+ RP + +K + +LGWEPK T+E
Sbjct: 277 DLPVKPARQLISYVTDRPGHDRRYAIDASKIKRELGWEPKVTVE 320
>gi|2959983|emb|CAA10917.1| (AJ222661) UDP-glucuronic acid epimerase
[Sinorhizobium meliloti]
Length = 341
Score = 56.2 bits (133), Expect = 4e-07
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 8/233 (3%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFW-RINELGIAQHPK-LHLVEYDLT 64
+ITG G G ++A+ L++ G+ V G + + + I Q V L
Sbjct: 4 LITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLE 63
Query: 65 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 124
D ++ R ELA P+ + +LAAQ+ V S + P D VG+ N+LE + + PK
Sbjct: 64 DRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPK-HL 122
Query: 125 YQASTSEMFGKVQQTPQIE-ETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 183
ASTS ++G ++ P E + P + Y K M +Y Y + + F
Sbjct: 123 MLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAHLYKVPTTAFRFFTV 182
Query: 184 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
P D K AI + +D+ G + RD+ + + V+ + R+
Sbjct: 183 YGPWGRPDMALFKFVDAIHNGR--PIDIYGEGRM--SRDFTYIDDLVESIVRL 231
>gi|2105060|emb|CAB08849| (Z95436) rmlB2 [Mycobacterium
tuberculosis]
Length = 314
Score = 55.8 bits (132), Expect = 5e-07
Identities = 66/265 (24%), Positives = 101/265 (37%), Gaps = 12/265 (4%)
Query: 6 AVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
A++TG G G+ L LL G+ V G + + N + + + +V DL
Sbjct: 3 ALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTADL 62
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
+LE P+ V++LAAQ V S P + +G V L EA R +
Sbjct: 63 H------AILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKI 116
Query: 124 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNH 183
+ +S ++G + P E P P SPY K+ +R YG+ + N
Sbjct: 117 VHTSSGGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANV 176
Query: 184 ESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 243
P R + A L G+ RD+ F + VD R + AD
Sbjct: 177 YGP-RQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVR-VSADVGG 234
Query: 244 --TFVLATNRTETVRDFVSLAASAV 266
F + T + + R S A+AV
Sbjct: 235 GLRFNIGTGKETSDRQLHSAVAAAV 259
>gi|2583123|gb|AAB82632.1| (AC002387) putative nucleotide sugar
epimerase [Arabidopsis thaliana]
Length = 437
Score = 55.8 bits (132), Expect = 5e-07
Identities = 73/325 (22%), Positives = 128/325 (38%), Gaps = 11/325 (3%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-FWRINELGIAQHPKLHLVEYDL 63
+ ++TG G G +++ L G V G + + + + + + +VE D+
Sbjct: 98 TVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDI 157
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
D+ +L ++ + V +LAAQ+ V + + P + G VNLLE + VNP+
Sbjct: 158 NDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPA 217
Query: 124 FYQASTSEMFGKVQQTPQIE-ETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 182
AS+S ++G + P E + P S Y K + Y YG+ F
Sbjct: 218 IVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 277
Query: 183 HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNL-DAKRDWGFAKEYVDGMWRMLQADE 241
P D T I +K + + + N RD+ + + V G L E
Sbjct: 278 VYGPWGRPDMAYFFFTKDI--LKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAE 335
Query: 242 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 301
T R +L ++ + ER+ + V + K L+ K R
Sbjct: 336 KSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQ--LKVKAKKNLI----KMPRNG 389
Query: 302 EVDLLIGNPAKARTKLGWEPKTTLE 326
+V N + A+ +LG++P T L+
Sbjct: 390 DVPFTHANISLAQRELGYKPTTDLQ 414
>gi|1881546 (U09239) dTDP-glucose-4,6-dehydratase [Streptococcus
pneumoniae]
Length = 349
Score = 55.4 bits (131), Expect = 7e-07
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 42/281 (14%)
Query: 59 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 118 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 165
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 166 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 224
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 225 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 283
++ G+W +L + +T+++ + + ++ + L L+ GQA
Sbjct: 229 HTNDHSSGVWIILTKGQIGETYLIGADGEKNNKEVLELI-------LKEMGQA------- 274
Query: 284 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 324
A VT +D +K R +LGW+P+ T
Sbjct: 275 -ADAYDHVTDRAGHDLRYAID-----ASKLRDELGWKPEFT 309
>gi|3907612|gb|AAC78676.1| (AF094575) dTDP-glucose-4,6-dehydratase
Cps19aN [Streptococcus pneumoniae]
Length = 349
Score = 55.4 bits (131), Expect = 7e-07
Identities = 62/281 (22%), Positives = 115/281 (40%), Gaps = 42/281 (14%)
Query: 59 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
VE + D++ + + +LAA + + + AA+S S + P +G LLEA R
Sbjct: 56 VELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 115
Query: 118 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 165
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 166 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 224
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 225 FAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 283
++ G+W +L + +T+++ + + ++ + L + + G D
Sbjct: 229 HTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQATDAYDHVTDRAGHD 288
Query: 284 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 324
+ + +K R +LGW+P+ T
Sbjct: 289 LRYAI--------------------DASKLREELGWKPEFT 309
>gi|2326949 (U43540) rhamnose biosynthesis protein [Mycobacterium
tuberculosis] >gi|2326950 (U43540) rfbA gene product
[Mycobacterium tuberculosis]
Length = 329
Score = 55.4 bits (131), Expect = 7e-07
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 56 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
+ LV+ D+TD +L+ A V + AA+S V + D P +G +LEA+
Sbjct: 51 IRLVQGDITDAELVSQLV--AESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAV 108
Query: 116 RIVNPKIRFYQASTSEMFGKVQQTPQ---IEETPFYPRSPYGIAKLYAHWMTVNYRESYG 172
R +R + ST E++G ++ + E TP+ P SPY K A + + S
Sbjct: 109 R--RHGVRLHHISTDEVYGDLELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSLC 166
Query: 173 IFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAKEYV 230
+ A N+ P + F+ R+IT+ + +LKL G+ RDW ++
Sbjct: 167 VRATISNCSNNYGPYQHVEKFIPRQITNCLT-------GLLKLYGDGGNVRDWIHVDDHN 219
Query: 231 DGMWRML 237
+ R+L
Sbjct: 220 SAVRRIL 226
>gi|4240415 (AF080235) NDP-hexose 4,6-dehydratase homolog
[Streptomyces cyanogenus]
Length = 326
Score = 55.4 bits (131), Expect = 7e-07
Identities = 46/172 (26%), Positives = 75/172 (42%), Gaps = 5/172 (2%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVY-GTYRRSSSLNFWRINELGIAQ-HPKLHLVEY 61
K +ITG G G++ + LL GY + G + + N + + HP+L V+
Sbjct: 2 KKILITGGAGFIGSHYVRTLLNDGYEDWKGAHVTVLDKLTYAGNRDNLPEAHPRLTFVQG 61
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
D+ D + LL V + AA+S V S + G LL+A+ K
Sbjct: 62 DICDFELLLELLP--GHDAVVHFAAESHVDRSLESAEEFVHTNVTGTQRLLDAVLATRVK 119
Query: 122 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
R ST E++G + + EE P P SPY +K + + +Y ++G+
Sbjct: 120 -RVVHVSTDEVYGSIDEGSWTEEWPLAPNSPYSASKAASDLLARSYWRTHGL 170
>gi|1169830|sp|P13226|GALE_STRLI UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
Length = 329
Score = 55.0 bits (130), Expect = 9e-07
Identities = 74/318 (23%), Positives = 123/318 (38%), Gaps = 23/318 (7%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
++TG G G+ +AQ L+E G V + S+ G+ + + D
Sbjct: 6 LVTGGAGYVGSVVAQHLVEAGNEVVVLHNLSTGFR------AGVPAGASFYRGDIRDQDF 59
Query: 67 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 126
V L+ V + AA S VG S +P D G + LLEA+R + R
Sbjct: 60 MRKVFRGRLSFDG-VLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAGVR-RLVF 117
Query: 127 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHESP 186
+ST+ +G+ +Q P +E P P +PYG +KL M ++G+ A S FN
Sbjct: 118 SSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSVPYFNVAGA 177
Query: 187 LRARDFVTRKITHAIAM---IKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 243
R V +H I + + G+ + + + D ++Y+ AD +
Sbjct: 178 NRGVRLVHDPESHLIPLVLQVAQGRREAISVYGDDYPTPDTCVRDYIH------VADLAE 231
Query: 244 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 303
+LA R + + + + R +G + I R +
Sbjct: 232 AHLLAVRRRPGNEHLICNLGNGNGFSVREVVETVRR-----VTGHPIPEIMAP-RRGRDP 285
Query: 304 DLLIGNPAKARTKLGWEP 321
+L+ + AR KLGW P
Sbjct: 286 AVLVASAGTAREKLGWNP 303
>gi|132499|sp|P26391|RFBB_SALTY DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|96840|pir||S15299 rfbB protein - Salmonella
typhimurium >gi|581654|emb|CAA40115| (X56793)
dTDP-glucose 4,6-dehydratase [Salmonella enterica]
Length = 361
Score = 55.0 bits (130), Expect = 9e-07
Identities = 64/296 (21%), Positives = 112/296 (37%), Gaps = 36/296 (12%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
I++ + + D+ D + R+ E P V +LAA+S V S P + VG
Sbjct: 46 ISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTY 105
Query: 110 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQIEE----------TPFYPRS 151
LLE R RF+ ST E++G + ++E T + P S
Sbjct: 106 ALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSS 165
Query: 152 PYGIAKLYAHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDV 211
PY +K + + +R +YG+ N+ P K+ + + L +
Sbjct: 166 PYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH----FPEKLIPLVILNALEGKPL 221
Query: 212 LKLGNLDAKRDWGFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQL 270
G D RDW + +++ + ++ + +T+ + + + D V +D ++
Sbjct: 222 PIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLD-EI 280
Query: 271 EWKGQAERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
K + RE T V P R +D K +LGW+P T E
Sbjct: 281 VPKATSYRE-------QITYVADRPGHDRRYAID-----AGKISRELGWKPLETFE 324
>gi|2983546 (AE000721) UDP-glucose-4-epimerase [Aquifex aeolicus]
Length = 327
Score = 55.0 bits (130), Expect = 9e-07
Identities = 46/154 (29%), Positives = 72/154 (45%), Gaps = 10/154 (6%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
K ++TG G G+++ + L E GY V Y S+ N W + + KL V+ DL
Sbjct: 2 KKVLVTGGAGYIGSHVVKALGEKGYEVL-IYDNLSTGNEWAV------LYGKL--VKADL 52
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
D + R+ E P V + AA V S +PL V +NLLE ++ +
Sbjct: 53 ADKETLRRVFEEFKPDAVMHFAAYIVVPESVKEPLKYYRNNVVNTINLLEVMQEFGVN-K 111
Query: 124 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAK 157
F +S++ ++G + P E+ P P +PYG K
Sbjct: 112 FVFSSSAAVYGIPESIPVKEDAPLNPINPYGETK 145
>gi|1651976|dbj|BAA16902| (D90901) CDP-glucose 4,6-dehydratase
[Synechocystis sp.]
Length = 360
Score = 55.0 bits (130), Expect = 9e-07
Identities = 81/338 (23%), Positives = 135/338 (38%), Gaps = 30/338 (8%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYG-TYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
KS +TG TG G++L L ++G V G + ++ N + E+ D
Sbjct: 10 KSVFLTGHTGFKGSWLTLWLSQLGAKVSGYSLDPLTNPNLCELAEIAKCLRSDTRA---D 66
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ DL++ + + A P+ V++LAAQ V S+ P+ T +G +LLEA+R +
Sbjct: 67 VNDLANLQKAIAEARPEIVFHLAAQPLVRRSYRDPVGTFATNVMGTAHLLEALRASDSVR 126
Query: 123 RFYQASTSEMFGKVQQT-PQIEETPFYPRSPYGIAKLYAHWMTVNYRESY----GIFAAS 177
+T +++ V+ P E+ PY +K + +YR+++ G+ AS
Sbjct: 127 VVVIVTTDKVYRNVEWCWPYREDDQLGGHDPYSASKAACEIVVASYRDAFLREQGVAVAS 186
Query: 178 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
N + D+ ++ + K V+ + A R W E + G +
Sbjct: 187 ARAGN---VIGGGDWSEDRLIPDVVRALDAKTMVI-IRRPQAIRPWQHVLEPLAGYLLLA 242
Query: 238 QA--DEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 295
Q P+ A N +D A+ V LE+ + E V+ G
Sbjct: 243 QKLWHSPE-LAGAYNLGPETKD-----AATVRQILEFASRIEPGLQVEYGDGNE------ 290
Query: 296 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMM 333
P E L AKART LG+ P +EE M
Sbjct: 291 ---GPHEAGWLSLEIAKARTLLGYRPSWGVEEAVRRTM 325
>gi|4981151|gb|AAD35714.1|AE001737_7 (AE001737) nucleotide sugar
epimerase, putative [Thermotoga maritima]
Length = 346
Score = 54.7 bits (129), Expect = 1e-06
Identities = 67/258 (25%), Positives = 103/258 (38%), Gaps = 12/258 (4%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
K ++TG G G+ L + LL++G V SS W + + P L +E D+
Sbjct: 14 KRVLVTGGAGAVGSNLVRRLLDLGAFVIVIDNLSSGYT-WLLPQ----DAPNLLFIEGDI 68
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
T+ R+ P+ +++LAA S D P + G G + LLE RI R
Sbjct: 69 TNDVDLKRVFN-EEPEIIFHLAAFFANQNSVDYPEKDLWVNGFGTLKLLEYTRIYGKVER 127
Query: 124 F-YQASTSEMFGKVQQTPQIEETPF--YPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
F Y +S ++ P E+ P + +PY I K + + Y I
Sbjct: 128 FVYASSGCSIYPSDAPMPFKEDLPISSWMSTPYQITKALGELYCNYFYKMYDIPITKARF 187
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FN P I + I LGK + G + RD+ + + VDG+ RM
Sbjct: 188 FNSFGPGEVPGQYRNVIPNFIYWAMLGK-PLPITGTGEETRDFTYVGDIVDGLLRMGYYR 246
Query: 241 EP--DTFVLATNRTETVR 256
E + F LA R ++
Sbjct: 247 EAIGEAFNLAAGREVKIK 264
>gi|1944622|emb|CAB05932| (Z83335) dTDP-glucose 4,6-dehydratase
[Streptococcus pneumoniae]
Length = 349
Score = 54.3 bits (128), Expect = 2e-06
Identities = 62/284 (21%), Positives = 113/284 (38%), Gaps = 43/284 (15%)
Query: 55 KLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEA 114
++ LV D+ D +L+ A + + AA+S S + P +G LLEA
Sbjct: 55 RVELVVGDIADAELVDKLV--AQADAIVHYAAESHNDNSLNDPSPFIHTNFIGIYTLLEA 112
Query: 115 IRIVNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHW 162
R + IRF+ ST E++G + + ET + P SPY K +
Sbjct: 113 ARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDL 170
Query: 163 MTVNYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKR 221
+ + S+G+ A N+ P + F+ R+IT+ ++ IK KL G R
Sbjct: 171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVR 225
Query: 222 DWGFAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAEREC 280
DW ++ G+W +L + +T+++ + + ++ + L + +
Sbjct: 226 DWIHTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQATDAYDHVTDRA 285
Query: 281 GVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 324
G D+ + +K R +LGW+P+ T
Sbjct: 286 GHDLRYAI--------------------DASKLRDELGWKPEFT 309
>gi|549563|sp|P35675|YGAE_ERWAM HYPOTHETICAL PROTEIN IN GALE
3'REGION >gi|1073272|pir||B36951 hypothetical protein
(galE 3' region) - Erwinia amylovora (fragment)
>gi|429079|emb|CAA53768| (X76172) unidentified ORF
[Erwinia amylovora]
Length = 164
Score = 54.3 bits (128), Expect = 2e-06
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
I+ +P+ H + D+ D S R P V +LAA+S V S D P + +G
Sbjct: 46 ISDNPRDHFSKTDICDSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNMIGTY 105
Query: 110 NLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQI--EETPFYPRSPYGIAK 157
LLEA R+ R + ST E+FG + T + E+T + P SPY +K
Sbjct: 106 VLLEAARMYWLGLPVERKEAFRLHHISTDEVFGDLHGTEDLFTEQTAYAPSSPYSASK 163
>gi|6460562|gb|AAF12268.1|AE001862_94 (AE001862) thymidine
diphosphoglucose 4,6-dehydratase [Deinococcus
radiodurans]
Length = 364
Score = 54.3 bits (128), Expect = 2e-06
Identities = 54/179 (30%), Positives = 79/179 (43%), Gaps = 19/179 (10%)
Query: 4 KSAVITGITGQDGAYLAQLLL----EMGYVVYG--TY--RRSSSLNFWRINELGIAQHPK 55
KS ++TG G G+ + L E VVY TY R+ + + W +P
Sbjct: 14 KSLLVTGGCGFIGSNFVRYWLGQHPESKVVVYDKLTYAGRKENLHDLW--------DNPA 65
Query: 56 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
L LV D+ D+ R + + N AA++ V S PL T+ G LLE
Sbjct: 66 LSLVVGDIGDMDLVRRTCQENDVDLIVNFAAETHVDQSILGPLVFTETNVRGTHVLLEVA 125
Query: 116 RIVNPKIRFYQASTSEMFGKVQQTPQ-IEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
R + IR + ST E++G ++ Q +E PRSPY +K A + Y +YGI
Sbjct: 126 RELG--IRLHHISTDEVYGHIKDGHQSVETDELAPRSPYAASKAAADQLVQAYAITYGI 182
>gi|2494672|sp|P95780|RMLB_STRMU DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1813347|dbj|BAA11249| (D78182)
dTDP-glucose-4,6-dehydratase [Streptococcus mutans]
Length = 348
Score = 53.9 bits (127), Expect = 2e-06
Identities = 53/193 (27%), Positives = 85/193 (43%), Gaps = 21/193 (10%)
Query: 59 VEYDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
VE + D++ S + +LAA + + + AA+S S P VG LLEA R
Sbjct: 56 VELVVGDIADSELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYTLLEAARK 115
Query: 118 VNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHWMTV 165
+ IRF+ ST E++G + + ET + P SPY K + +
Sbjct: 116 YD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVK 173
Query: 166 NYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 224
+ S+G+ A N+ P + F+ R+IT+ ++ IK KL G RDW
Sbjct: 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIK-PKL----YGEGKNVRDWI 228
Query: 225 FAKEYVDGMWRML 237
++ G+W +L
Sbjct: 229 HTNDHSTGVWAIL 241
>gi|1870164|emb|CAB05928| (Z83335) unknown [Streptococcus
pneumoniae]
Length = 356
Score = 53.9 bits (127), Expect = 2e-06
Identities = 84/351 (23%), Positives = 148/351 (41%), Gaps = 34/351 (9%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMG--YVVYGTYRRSS----SLNFWRINELG--IAQ 52
M K+ +ITG+ G G+ L + LLE+ + G + +L +R+ +L I
Sbjct: 1 MRGKTILITGVAGFIGSNLVRKLLELEGTMTIIGLDNLNDYYDIALKDYRLLQLNKLIQD 60
Query: 53 HPKLH--LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVN 110
+P+ + ++ D+ D ++ + P+ V NLAAQ+ V S P + VG N
Sbjct: 61 YPEKNWIFIKGDIADKMLINKIFKSYHPQIVVNLAAQAGVRYSITNPDVYIESNIVGFHN 120
Query: 111 LLEAIR----IVNPKI-RFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMT 164
+LEA R I + + AS+S ++G ++ P E+ P S Y K
Sbjct: 121 VLEACRHSYEIYDGGVEHLVYASSSSVYGGNKKIPFATEDKVDNPISLYAATKKTNELQA 180
Query: 165 VNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 224
Y + Y I + F P D T + +++ GN KRD+
Sbjct: 181 YAYSKIYNIPSTGLRFFTVYGPAGRPDMAYFGFTDKLR--SGSDIEIYNHGN--CKRDFT 236
Query: 225 FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERE---CG 281
+ + V+G+ R++Q+ P V + N ++ S + L++ ++E G
Sbjct: 237 YIDDIVEGIVRVMQS-APKKLVGSDNLPLAPYKVYNIGNSKPENLLDFVDVLQQELIKAG 295
Query: 282 V-----DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
V D S K LV + +P +V + + + G++PKT+L E
Sbjct: 296 VLPENYDFDSHKKLVPM-----QPGDVPVTYADTSDLERDFGFKPKTSLRE 341
>gi|3061300|dbj|BAA25656| (AB005901) deduced dNDP-hexose
4,6-dehydratase [Streptomyces kasugaensis]
Length = 329
Score = 53.9 bits (127), Expect = 2e-06
Identities = 78/324 (24%), Positives = 126/324 (38%), Gaps = 30/324 (9%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFW-RINELGIAQHPKLH-LVEY 61
+ ++TG G G++L + L+ G V RR S+ R+ L A L +V
Sbjct: 11 RQVLVTGADGFIGSHLTETLVSRGARVTAVVRRVSAAQVTHRLRNLSAATVDALERVVHV 70
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
DL S+V +L ++LAA ++V S DQP + +++L A + P
Sbjct: 71 DLAG-PSAVDVLGRLEADTWFHLAADAYVPASLDQPADVVRTNVMSTLHVLLAAQQRQPA 129
Query: 122 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
S+SE++G Q E P P +PY +K+ + ++ +YG+ F
Sbjct: 130 -HLLVTSSSEVYGS-QPDAITERHPLEPATPYAASKVACDRLAWSWHHTYGLPLTIVRPF 187
Query: 182 NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 241
N P D V + A+ G+ + G+ + RD F + V G + A+
Sbjct: 188 NSYGPRHVYDAVPLFLARALR----GEPITIN-GSGEQTRDLTFVADTVAGF--LALAEL 240
Query: 242 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 301
P T T T + +A + V + S +V P R
Sbjct: 241 PATGETYNIGTGTDHRIIDVARAIVAL---------------TGSQSEIVHGPP---RSG 282
Query: 302 EVDLLIGNPAKARTKLGWEPKTTL 325
EV L +PAK GW + L
Sbjct: 283 EVLKLQADPAKLTEATGWRAEYDL 306
>gi|4741795|gb|AAD28704.1|AF101047_5 (AF101047) putative
dTDP-D-glucose 4,6-dehydratase [Haemophilus ducreyi]
Length = 346
Score = 53.9 bits (127), Expect = 2e-06
Identities = 48/201 (23%), Positives = 86/201 (41%), Gaps = 18/201 (8%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFD--QPLTTTDITGVG 107
++QH + + D+ D + P +V +LAA+S V S + P T+I +G
Sbjct: 46 VSQHKRYTFEQVDINDSGRIAEIFYHYQPDKVMHLAAESHVDRSIEGSAPFIQTNI--IG 103
Query: 108 AVNLLEAIRIV--------NPKIRFYQASTSEMFGKVQQTPQ--IEETPFYPRSPYGIAK 157
LLE R + F+ ST E+FG + PQ E++ + P SPY +K
Sbjct: 104 TYTLLETARSYWQSLDQQKKAQFLFHHISTDEVFGDLAHQPQRFTEQSAYMPSSPYSASK 163
Query: 158 LYAHWMTVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNL 217
+ + + +YG+ N+ P F + I I GK + G+
Sbjct: 164 AASDHLVQAWYRTYGLPTVISHCSNNYGPYH---FPEKLIPLTILNALSGK-PLPVYGDG 219
Query: 218 DAKRDWGFAKEYVDGMWRMLQ 238
RDW F +++ ++++++
Sbjct: 220 LQVRDWLFVEDHARALYKVIK 240
>gi|1552867|emb|CAB02463| (Z80343) epiB [Mycobacterium tuberculosis]
Length = 326
Score = 53.1 bits (125), Expect = 3e-06
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
++TG G G++L + LL G+ V T SS N R N G H + + +TD
Sbjct: 4 LVTGGAGFQGSHLTESLLANGHWV--TVLDKSSRNAVR-NMQGFRSHDRAAFISGSVTDG 60
Query: 67 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 126
+ R + V++LAA V S P + + +G +LEA+R + R
Sbjct: 61 QTIDRAVR--DHHVVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVR--RYRNRLIY 116
Query: 127 ASTSEMFG---KVQQTPQIEE-TPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
ST E++G +++ +++E P SPYG +K A + +Y SYG+
Sbjct: 117 VSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGL 167
>gi|2650268 (AE001079) UDP-glucose 4-epimerase (galE-1)
[Archaeoglobus fulgidus]
Length = 305
Score = 53.1 bits (125), Expect = 3e-06
Identities = 77/330 (23%), Positives = 136/330 (40%), Gaps = 45/330 (13%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
V+TG G G+++ L E +V S + F +NE A+ K L D+ D
Sbjct: 3 VVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF--VNEA--ARLVKADLAADDIKDY 58
Query: 67 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 126
L +EV+++AA V + + P + LLEA+R R
Sbjct: 59 --------LKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVS-RIVF 109
Query: 127 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHESP 186
STS ++G+ + P E+ P +P S YG +KL + +Y ++ + A
Sbjct: 110 TSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWI--------- 160
Query: 187 LRARDFVTRKITHA-----IAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 241
R + + R+ TH I +K ++ LGN + + + + + VD M L+ DE
Sbjct: 161 YRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDE 220
Query: 242 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 301
V++ + Q++ K AE C S + T + ++
Sbjct: 221 R----------------VNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWK-G 263
Query: 302 EVDLLIGNPAKARTKLGWEPKTTLEELCHM 331
+V +++ + K + +LGW+P+ EE M
Sbjct: 264 DVPVMLLSIEKLK-RLGWKPRYNSEEAVRM 292
>gi|3193316 (AF069299) contains similarity to nucleotide sugar
epimerases [Arabidopsis thaliana]
Length = 430
Score = 52.7 bits (124), Expect = 4e-06
Identities = 78/343 (22%), Positives = 128/343 (36%), Gaps = 47/343 (13%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
S ++TG G G +++ L G V G + + R + + + + +VE D
Sbjct: 92 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQ-ALLERSGVFVVEGD 150
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D + +L E+ V +LAAQ+ V + + P + G VNLLE + NP+
Sbjct: 151 INDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQP 210
Query: 123 RFYQASTSEMFGKVQQTPQIE-ETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
AS+S ++G + P E + P S Y K + Y YG+ F
Sbjct: 211 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 270
Query: 182 NHESPLRARD----FVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
P D F TR I A + + + G + RD+ + + V G L
Sbjct: 271 TVYGPWGRPDMAYFFFTRDILKGKA---ISIFEGVNHGTV--ARDFTYIDDIVKGCLGAL 325
Query: 238 QADEPDT--------------FVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVD 283
E T F L V D V++ ++ K +A+R
Sbjct: 326 DTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTI------LERLLKVKAKRNI--- 376
Query: 284 VASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
K R +V N + A+ +LG++P T L+
Sbjct: 377 -----------MKLPRNGDVQFTHANISSAQRELGYKPTTDLQ 408
>gi|2121111|pir||I55054 dTDP-D-glucose 4,6-dehydratase - Escherichia
coli
Length = 361
Score = 52.7 bits (124), Expect = 4e-06
Identities = 65/284 (22%), Positives = 110/284 (37%), Gaps = 36/284 (12%)
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 118
D+ D + R+ P V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 119 -----NPKIRFYQASTSEMFGKVQQTPQI----------EETPFYPRSPYGIAKLYAHWM 163
RF+ ST E++G + ++ E T + P SPY +K + +
Sbjct: 118 LDSDKENSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHL 177
Query: 164 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 223
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 224 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 282
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEVKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 283 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
T V P R +D K LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----AEKIGRALGWKPQETFE 324
>gi|2494668|sp|Q57664|GALE_METJA PUTATIVE UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|2129343|pir||D64326 UDPglucose 4-epimerase (EC
5.1.3.2) - Methanococcus jannaschii >gi|1590951 (U67477)
UDP-glucose 4-epimerase (galE) [Methanococcus
jannaschii]
Length = 305
Score = 52.7 bits (124), Expect = 4e-06
Identities = 44/167 (26%), Positives = 72/167 (42%), Gaps = 9/167 (5%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
++TG G G+++ L+E Y V +L N + +PK V D+ D
Sbjct: 3 LVTGGAGFIGSHIVDKLIENNYDVIIL----DNLTTGNKNNI----NPKAEFVNADIRDK 54
Query: 67 SSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFYQ 126
++ + V + AAQ V S + P+ DI +G +N+LE +R + +
Sbjct: 55 DLDEKI-NFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFA 113
Query: 127 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
+S ++G+ P E P P SPYG++K Y YGI
Sbjct: 114 SSGGAVYGEPNYLPVDENHPINPLSPYGLSKYVGEEYIKLYNRLYGI 160
>gi|2506451|sp|P37759|RBB1_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1736731|dbj|BAA15883| (D90841) dTDP-glucose
4,6-dehydratase (EC 4.2.1.46). [Escherichia coli]
>gi|1736744|dbj|BAA15895| (D90842) dTDP-glucose
4,6-dehydratase (EC 4.2.1.46). [Escherichia coli]
>gi|1788353 (AE000294) dTDP-glucose 4,6 dehydratase
[Escherichia coli] >gi|2665489 (U09876) dTDP-D-glucose
4,6-dehydratase [Escherichia coli]
Length = 361
Score = 52.7 bits (124), Expect = 4e-06
Identities = 65/284 (22%), Positives = 110/284 (37%), Gaps = 36/284 (12%)
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 118
D+ D + R+ P V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 119 -----NPKIRFYQASTSEMFGKVQQTPQI----------EETPFYPRSPYGIAKLYAHWM 163
RF+ ST E++G + ++ E T + P SPY +K + +
Sbjct: 118 LDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHL 177
Query: 164 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 223
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 224 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 282
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 283 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
T V P R +D K LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----AEKIGRALGWKPQETFE 324
>gi|3093975 (AF059755) nucleotide sugar epimerase [Vibrio
vulnificus]
Length = 334
Score = 52.3 bits (123), Expect = 6e-06
Identities = 81/337 (24%), Positives = 135/337 (40%), Gaps = 37/337 (10%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-FWRIN----ELGIAQHPKLHLVEY 61
++TG G G+ A+ L G+ V G +LN ++ +N L ++P V
Sbjct: 4 LVTGAAGFIGSATAEKLNAAGHEVVGI----DNLNDYYDVNLKHARLARIENPLFKFVSV 59
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
D++D + +L V +LAAQ+ V S + P D VG +N+LE R N
Sbjct: 60 DISDRGAMEQLFATEKFDRVIHLAAQAGVRYSLENPHAYADSNLVGHLNILEGCR-QNKV 118
Query: 122 IRFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
AS+S ++G + P ++ +P S Y K M +Y Y I +G+
Sbjct: 119 SHLVYASSSSVYGLNAKVPFSTSDSVDHPVSLYAPTKKSNELMAHSYSHLYDI-PTTGLR 177
Query: 181 F-----NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWR 235
F + P A T+KI A +D+ G D RD+ + V+G+ R
Sbjct: 178 FFTVYGSWGRPDMAPFIFTKKILDGDA------IDINNNG--DMWRDFTHVDDIVEGVVR 229
Query: 236 MLQA----DEPDTFVLATNRTETVRDFVSLAASAVDIQL-EWKGQAERECGVDVASGKTL 290
+ +E T T T + V I L ++ E E G++
Sbjct: 230 IADVIPTRNESWTVEAGTPATSSAPYSVYNIGHGSPINLMDFVKAIENELGIEAKK---- 285
Query: 291 VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
N + +P +V + T G++P+ T++E
Sbjct: 286 ---NFREMQPGDVYQTYADTEDLFTATGYKPRVTVKE 319
>gi|6707010|gb|AAF25549.1|AF109295_4 (AF109295) GalE [Staphylococcus
carnosus]
Length = 329
Score = 52.3 bits (123), Expect = 6e-06
Identities = 78/342 (22%), Positives = 133/342 (38%), Gaps = 62/342 (18%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKL----HLVE 60
S ++ G G G++ A L+E GY V ++ LG + E
Sbjct: 2 SVLVLGGAGYIGSHAADQLIEQGYDVAV------------VDNLGTGHRQAVPETARFYE 49
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
D+ D + + E + V++ A S VG S ++PL + G LLE ++ +
Sbjct: 50 GDIRDKAFLNHVFEQENVEGVFHFCAYSLVGESVEKPLEYFNNNVYGMQVLLEVMKAHDV 109
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
+ +ST+ ++G+ + P E+ P P +PYG +KL M +YG+ A+
Sbjct: 110 NEIIF-SSTAAVYGEPEIIPIQEDAPKAPTNPYGESKLMMEKMMHWCHNAYGVNYAALRY 168
Query: 181 FN----HESPLRARDFVTRKITHAIAMI---KLGKLDVLKLGNLDAK-RDWGFAKEYVD- 231
FN E D TH I ++ LG+ D + + D D ++Y+
Sbjct: 169 FNVAGAKEDGSIGEDHNPE--THLIPIVLQAALGQRDAITIFGTDYDTEDGSCVRDYLHV 226
Query: 232 ---------GMWRMLQADEPDTFVLATNRTETVRDFVSLA--ASAVDIQLEWKGQAEREC 280
+ E F L +++ +V + V A A+ +DI+ E ER
Sbjct: 227 TDLIAAHILAYQYLKDGGESGAFNLGSSQGYSVIEIVEAARKATGIDIKAEI---GERRA 283
Query: 281 GVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPK 322
G + L+ + KA+ LGW+PK
Sbjct: 284 G--------------------DPSKLVASSDKAQRVLGWKPK 305
>gi|68391|pir||XUSMUG UDPglucose 4-epimerase (EC 5.1.3.2) -
Streptomyces sp >gi|153261 (M18953) UDP galactose
4-epimerase (EC 1.7.7.12) [Streptomyces lividans]
Length = 319
Score = 51.9 bits (122), Expect = 8e-06
Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-FWRINELGIAQHPKLHLVEYDLTD 65
++TG G G+ +AQ L+E G V + S+ R +HP V L+
Sbjct: 6 LVTGGAGYVGSVVAQHLVEAGNEVVVLHNLSTGFREVCRRVPRSSRRHPGRRQVRGRLSF 65
Query: 66 LSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFY 125
V + AA S VG S +P D G + LLEA+R + R
Sbjct: 66 -------------DGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAGVR-RLV 111
Query: 126 QASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 182
+ST+ +G+ +Q P +E P P +PYG +KL M ++G+ A S FN
Sbjct: 112 FSSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSVPYFN 168
>gi|1752648|emb|CAA71250| (Y10168) glucose epimerase [Bacillus
thuringiensis]
Length = 322
Score = 51.9 bits (122), Expect = 8e-06
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 21/241 (8%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE------ 60
++TG G G +L + LL + V G S+N + ++ + +H +L ++E
Sbjct: 7 LVTGAAGFIGFHLTKRLLAQNFHVIGV----DSINDYY--DVSLKKH-RLKILEKKSNFK 59
Query: 61 YDLTDLSSSVRLLELAAPKEVY---NLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
+ D+S+ L ++ + V+ NLAAQ+ V S + P + + VG VN+LEA R
Sbjct: 60 FYKIDISNKENLNQIFKEQIVHIVINLAAQAGVRYSIENPDSYVNSNLVGFVNILEACRQ 119
Query: 118 VNPKIRFYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
N + Y AS+S ++G P +++ +P S Y K M Y + I
Sbjct: 120 YNVEHLIY-ASSSSVYGANTSIPFSTKDSVDHPVSLYAATKKSNELMAHTYSHLFNIPTT 178
Query: 177 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
F P D T I +I+ + V G D +RD+ + + ++G+ R+
Sbjct: 179 GLRFFTVYGPWGRPDMAYYSFTRNI-IIENNTIRVFNNG--DMRRDFTYIDDIIEGIIRL 235
Query: 237 L 237
+
Sbjct: 236 I 236
>gi|3087757|emb|CAA66078| (X97448) galE [Brucella melitensis]
Length = 328
Score = 51.9 bits (122), Expect = 8e-06
Identities = 78/346 (22%), Positives = 139/346 (39%), Gaps = 53/346 (15%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPK-LHLVEY---- 61
++TG G G++ L+E G+ V +S HP+ LH +E
Sbjct: 4 LVTGGAGYIGSHTCVQLIEAGHEVVVVDNFDNS-------------HPEALHRIEKITGP 50
Query: 62 -DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
D+ ++ ++++ V + A VG S ++PL D +G + LL+A+ +
Sbjct: 51 GDIAIVALMEQMIKRHKCTAVIHFAGLKAVGESSEKPLLYYDCNVLGTLRLLQAMEVTGV 110
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI- 179
K + +S++ ++G + P E+ P +PYG KL M + S +A + +
Sbjct: 111 K-KLVFSSSATVYGVPGKLPITEDQPLSATNPYGRTKLVIEDMLRDLYNSDNSWAVAILR 169
Query: 180 LFN----HESPLRARDFVTRKITHAI-AMIKLGKLDVLKLGNLD-------AKRDWGFAK 227
FN HES L D + + AI A + G+ L + D RD+
Sbjct: 170 YFNPVGAHESGLIGEDPNDSQQSDAIIAQVATGQTVKLNIWGNDYPTPDGTGVRDYIHVN 229
Query: 228 EYVDGMWRMLQA-DEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVAS 286
+ G + L+ D+P +V S +D+ ++ + RE ++A
Sbjct: 230 DLAAGHLKALKKLDKPSA--------SSVNLGTGQGYSVLDVIKAFEHVSNREIKYEIA- 280
Query: 287 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMM 332
P+ RP + +P A+ LGW + L E+C M
Sbjct: 281 --------PR--RPGMLPECYADPGFAKKFLGWSAEKNLREMCQDM 316
>gi|5281036|emb|CAB45972.1| (AL080318) nucleotide sugar
epimerase-like protein [Arabidopsis thaliana]
Length = 436
Score = 51.9 bits (122), Expect = 8e-06
Identities = 46/180 (25%), Positives = 80/180 (43%), Gaps = 5/180 (2%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGYVVYG--TYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
+ ++TG +G G +++ L G V G + R R + G+ + + +VE D
Sbjct: 97 TVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQ-GLLERSGVFVVEGD 155
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D +L ++ V +LAAQ+ V + P + + G VNLLE + NP+
Sbjct: 156 INDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQP 215
Query: 123 RFYQASTSEMFGKVQQTPQIE-ETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
AS+S ++G + P E + P S Y K + Y YG+ + +G+ F
Sbjct: 216 AIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEGIAHTYNHIYGL-SLTGLRF 274
>gi|1666507 (U61226) RfbB [Leptospira interrogans]
>gi|5814320|gb|AAD52188.1|AF144879_27 (AF144879) unknown
[Leptospira interrogans]
Length = 349
Score = 51.5 bits (121), Expect = 1e-05
Identities = 77/336 (22%), Positives = 130/336 (37%), Gaps = 37/336 (11%)
Query: 4 KSAVITGITGQDGAYLAQLLL----EMGYVVYG--TYRRS-SSLNFWRINELGIAQHPKL 56
K ++TG G G+ L+L E VV+ TY + SL W+ + +
Sbjct: 2 KKILVTGGAGFIGSNFVNLILNDTKEYQVVVFDKLTYAGNLRSLESWK-------KDSRF 54
Query: 57 HLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
V+ D+ + + + + + AA+S V S P +G LL+A R
Sbjct: 55 IFVKADIANKEEVSSIFQEHKFNYIAHFAAESHVDRSISGPEEFIKTNVLGTFYLLDAAR 114
Query: 117 IV----NPKIRFYQASTSEMFGKVQQTPQI-EETPFYPRSPYGIAKLYAHWMTVNYRESY 171
+ +F ST E+FG + + EETP+ P SPY +K + + +Y +Y
Sbjct: 115 LQWNGSYEGKKFLHVSTDEVFGTLGDSGYFTEETPYAPNSPYSASKASSDHIVRSYYHTY 174
Query: 172 GIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVD 231
+ + N+ P F + I I GK + G+ RDW + K++ +
Sbjct: 175 HMPVVTTNCSNNYGPYH---FPEKLIPLMILNCLQGK-PLPVYGDGKNIRDWLYVKDHCE 230
Query: 232 GM-WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTL 290
+ + Q +T+ + T + D V S +D +L G + V
Sbjct: 231 ALRVALFQGLPGETYNIGTRNEKKNIDIVDSICSIMD-ELHPSGAPHSKLIQYVKD---- 285
Query: 291 VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
RP +P+K +LGW+PK E
Sbjct: 286 --------RPGHDFRYAIDPSKIEKELGWKPKFAFE 313
>gi|6015668|emb|CAB57495.1| (Y18930) dTDP-glucose 4,6-dehydratase
[Sulfolobus solfataricus]
Length = 310
Score = 51.5 bits (121), Expect = 1e-05
Identities = 70/329 (21%), Positives = 126/329 (38%), Gaps = 46/329 (13%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLTDL 66
+I+G G G++L + LLE G + +++L A K + D+ +
Sbjct: 6 LISGGAGFLGSHLTEALLEKGEEIT------------IVDDLSTA---KYFNIRKDVEFI 50
Query: 67 SSSVRLLELAAPKEVY-NLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRFY 125
V E +V +LAA+ + P+ T +G +LE R N RF
Sbjct: 51 KKKVEEFETEKKYDVVIHLAARPSPEDYIEHPVDTALSNSLGTYKMLEIARKSNA--RFI 108
Query: 126 QASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
S+SE++G P E P RS Y +K ++ + + Y Y +
Sbjct: 109 YTSSSEVYGSASIIPTPETYWGYVNPIGIRSCYDESKRFSEALIMAYHRQYKLDTRIQRP 168
Query: 181 FNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQAD 240
FN P D ++ L DV G+ + R + + ++VD +++ D
Sbjct: 169 FNVYGPGLREDGTYGRVVSRFIYQALKGEDVTVFGDGNQTRAFLYISDWVDATIKLIYKD 228
Query: 241 --EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 298
E + F + +++ + + ++ + + K+ + P
Sbjct: 229 GLEGEVFNIGSDKEIKIIELANMI-------------------IKLTGSKSRIKYLPP-- 267
Query: 299 RPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
RP + + KA+ KLGW PK +LEE
Sbjct: 268 RPDDPPRRAADITKAKEKLGWYPKISLEE 296
>gi|2506452|sp|P37777|RFBB_SHIFL DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|1073703|pir||B55213 rfbB protein - Shigella flexneri
(strain 2a) >gi|294896 (L14842) dTDP-D-glucose
4,6-dehydratase [Shigella flexneri]
Length = 361
Score = 51.2 bits (120), Expect = 1e-05
Identities = 65/284 (22%), Positives = 110/284 (37%), Gaps = 36/284 (12%)
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 118
D+ D + R+ P V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 119 -----NPKIRFYQASTSEMFGKVQQTPQ----------IEETPFYPRSPYGIAKLYAHWM 163
RF+ ST E++G + + E T + P SPY +K + +
Sbjct: 118 LNDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHL 177
Query: 164 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 223
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 224 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 282
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 283 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
T V P R +D K +LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----ADKISRELGWKPQETFE 324
>gi|3608396 (AF071085) putative dTDP-glucose-4,6-dehydratase
[Enterococcus faecalis]
Length = 342
Score = 51.2 bits (120), Expect = 1e-05
Identities = 64/284 (22%), Positives = 115/284 (39%), Gaps = 43/284 (15%)
Query: 55 KLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEA 114
++ LV D+ D RL+ A V + A +S S + P +G L+EA
Sbjct: 52 RVELVVGDIVDAELVNRLV--AETDAVVHYAXESHNDNSLNDPFPFVQTNLIGTYTLIEA 109
Query: 115 IRIVNPKIRFYQASTSEMFGKVQQTPQIE------------ETPFYPRSPYGIAKLYAHW 162
R N +R++ ST E++G + + ETP+ P SPY K +
Sbjct: 110 CRKNN--VRYHHVSTDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDL 167
Query: 163 MTVNYRESYGIFAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKR 221
+ + S+ + A N+ P + F+ R+IT+ ++ I KL G R
Sbjct: 168 LVKAWVRSFNLQATISNCSNNYGPYQHIEKFIPRQITNVLSGIT-PKL----YGAGKNVR 222
Query: 222 DWGFAKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAEREC 280
DW ++ +W +L + +T+++ + E + + +++ LE GQ
Sbjct: 223 DWIHTNDHSSAVWAILTKGQIGETYLIGADGEEDNK-------TVMELILELMGQP---- 271
Query: 281 GVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTT 324
VD +N + + + + R +LGWEP+ T
Sbjct: 272 -VDAYEH-----VNDRVGHDLRYAI---DSTRLREELGWEPEFT 306
>gi|2146021|pir||S49054 dTDPglucose 4,6-dehydratase (EC 4.2.1.46) -
Streptomyces fradiae (strain T59235) >gi|473600 (U08223)
dTDP-glucose dehydratase [Streptomyces fradiae]
Length = 333
Score = 50.8 bits (119), Expect = 2e-05
Identities = 70/279 (25%), Positives = 103/279 (36%), Gaps = 28/279 (10%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
+A HP L V D+ D RL+E V + AA+S V S + G
Sbjct: 51 VAGHPDLEFVRGDIADHGWWRRLMEGVGL--VVHFAAESHVDRSIESSEAFVRTNVEGTR 108
Query: 110 NLLEAIRIVNPKI-RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYR 168
LL+A V+ + RF ST E++G + + E+ P P SPY K + + + Y
Sbjct: 109 VLLQAA--VDAGVGRFVHISTDEVYGSIAEGSWPEDHPVAPNSPYAATKAASDLLALAYH 166
Query: 169 ESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKE 228
+YG+ N+ P + + T + L L V G+ R+W +
Sbjct: 167 RTYGLDVRVTRCSNNYGPRQYPEKAVPLFTTNL----LDGLPVPLYGDGGNTREWLHVDD 222
Query: 229 YVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGK 288
+ G+ + P TE A D LE CG D S
Sbjct: 223 HCRGVALVGAGGRPGVIYNIGGGTELTN------AELTDRILEL-------CGAD-RSAL 268
Query: 289 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
V P R VD K R +LG+ P+T + E
Sbjct: 269 RRVADRPGHDRRYSVD-----TTKIREELGYAPRTGITE 302
>gi|4836876|gb|AAD30579.1|AC007260_10 (AC007260) Similar to
dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana]
Length = 669
Score = 50.8 bits (119), Expect = 2e-05
Identities = 44/174 (25%), Positives = 70/174 (39%), Gaps = 5/174 (2%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQH-PKLHLVEYD 62
K+ +ITG G +++A L+ Y Y + L ++H P V+ D
Sbjct: 7 KNILITGAAGFIASHVANRLIR-SYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGD 65
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ LL + + AAQ+ V SF T G LLEA ++
Sbjct: 66 IASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 123 RFYQASTSEMFGKVQQTPQI---EETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
RF ST E++G+ + + E + P +PY K A + + Y SYG+
Sbjct: 126 RFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
>gi|3021355|emb|CAA06338.1| (AJ005081) UDP-galactose 4-epimerase
[Cyamopsis tetragonoloba]
Length = 354
Score = 50.4 bits (118), Expect = 2e-05
Identities = 72/341 (21%), Positives = 142/341 (41%), Gaps = 29/341 (8%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL--NFWRINEL-GIAQHPKLHLVE 60
++ ++TG G G++ LL+ G+ V +S+ R+ L G LH
Sbjct: 10 ETILVTGGAGFIGSHTVVQLLKQGFHVSIIDNLYNSVIDAVHRVRLLVGPLLSSNLHFHH 69
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
DL ++ L V + A VG S P D V +NL + + N
Sbjct: 70 GDLRNIHDLDILFSKTKFDAVIHFAGLKGVGESVLNPSNYYDNNLVATINLFQVMSKFNC 129
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
K + +S++ ++G+ Q P +E++ + +PYG +KL+ + + + + + IL
Sbjct: 130 K-KLVISSSATVYGQPDQIPCVEDSNLHAMNPYGRSKLFVEEVARDIQRAEAEWRI--IL 186
Query: 181 FNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWGFAKEYV 230
+ +P+ A + + + I + + +L L + G+ +D ++Y+
Sbjct: 187 LRYFNPVGAHESGQIGEDPRGLPNNLMPYIQQVAVARLPELNIYGHDYPTKDGTAIRDYI 246
Query: 231 DGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQL-EWKGQAERECGVDVASGKT 289
M D D + A + T ++ +A ++ E + ASGK
Sbjct: 247 HVM------DLADGHIAALRKLFTTD---NIGCTAYNLGTGRGTSVLEMVAAFEKASGKK 297
Query: 290 L-VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
+ + + P+ RP + + + KA +LGW+ K +EE+C
Sbjct: 298 IPIKMCPR--RPGDATAVYASTEKAEKELGWKAKYGVEEMC 336
>gi|5459017|emb|CAB50503.1| (AJ248288) UDP-glucose 4-epimerase
(galE-2) [Pyrococcus abyssi]
Length = 317
Score = 50.4 bits (118), Expect = 2e-05
Identities = 75/330 (22%), Positives = 132/330 (39%), Gaps = 48/330 (14%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSS----SLNFWRINELGIAQHPKLHLVEYD 62
++TG G G++L L+E GY V S+ +LN W NE + D
Sbjct: 4 LVTGGAGFIGSHLVDRLMEDGYEVRVLDDLSAGSLENLNRWLENE-------NFEFIRGD 56
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D ++ + V++LAA V +S P + + NLL+AIR N K
Sbjct: 57 MRDYKIVKEAVDDV--EVVFHLAANPEVRISSQSPELLYETNVLITYNLLQAIRESNVKF 114
Query: 123 RFYQASTSEMFGKVQQTPQIEE-TPFYPRSPYGIAKLYAHWMTVNYRESYG----IFAAS 177
+ S+S ++G P E P P S YG AKL A + Y +G IF +
Sbjct: 115 LVF-TSSSTVYGDANVLPTPESYGPLEPISVYGGAKLAAEALISGYAHIFGFRALIFRLA 173
Query: 178 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
I+ + DF+ + +K ++ LG+ ++ + + ++G+ +
Sbjct: 174 NIIGKRSNHGVIYDFINK--------LKRNPNELEILGDGKQRKSYLHVSDTINGILHIF 225
Query: 238 QADEP-----DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVT 292
+ + D + L TV++ + + + + ++K GVD G
Sbjct: 226 EYFKRQNKIFDVYNLGNEDWITVKEIAEIVSEEMGLSPKFKFTG----GVDGGRG----- 276
Query: 293 INPKFYRPAEVDLLIGNPAKARTKLGWEPK 322
+V ++ + KA+ K GW PK
Sbjct: 277 ------WKGDVKFMLLSIEKAK-KTGWRPK 299
>gi|6598832|gb|AAF18687.1|AC010795_2 (AC010795) putative UDP-glucose
4-epimerase [Arabidopsis thaliana]
Length = 351
Score = 50.4 bits (118), Expect = 2e-05
Identities = 74/341 (21%), Positives = 137/341 (39%), Gaps = 29/341 (8%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL--NFWRINEL-GIAQHPKLHLVE 60
++ ++TG G G + LL G+ V +S+ R+ EL G KL
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNL 66
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
DL + +L V + A VG S P D VG +NL E + N
Sbjct: 67 GDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNC 126
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
K+ + +S + ++G+ + P +E+ +PYG KL+ + + + + IL
Sbjct: 127 KMMVFSSSAT-VYGQPEIVPCVEDFELQAMNPYGRTKLFLEEIARDIHAAEPEWKI--IL 183
Query: 181 FNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLD-AKRDWGFAKEYV 230
+ +P+ A + + + I + +G+L L + D D ++Y+
Sbjct: 184 LRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDYI 243
Query: 231 DGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQL-EWKGQAERECGVDVASGKT 289
M D D V A N+ + + +A ++ + E + ASGK
Sbjct: 244 HVM------DLADGHVAALNKLFSDS---KIGCTAYNLGTGQGTSVLEMVSSFEKASGKK 294
Query: 290 L-VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
+ + + P+ R + + + KA +LGW+ K ++E+C
Sbjct: 295 IPIKLCPR--RAGDATAVYASTQKAEKELGWKAKYGVDEMC 333
>gi|1653195|dbj|BAA18111| (D90911) dTDP-glucose 4-6-dehydratase
[Synechocystis sp.]
Length = 328
Score = 50.0 bits (117), Expect = 3e-05
Identities = 81/344 (23%), Positives = 136/344 (38%), Gaps = 48/344 (13%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQ---HPKLHLVEYDL 63
++TG G G++L L+ G+ V NF+ + I Q +P L+ +D+
Sbjct: 23 LVTGGAGFIGSHLIDRLMAQGHEVLCLD------NFYTGTKRNIVQWLDNPNFELIRHDV 76
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQ-SFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
T+ +RL +VY+LA S V F+ P+ T +G + +L + V
Sbjct: 77 TE---PIRL----EVDQVYHLACPASPVHYQFN-PVKTIKTNVMGTLYMLGLAKRVGA-- 126
Query: 123 RFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 177
RF ASTSE++G PQ E PR+ Y K A + Y + +
Sbjct: 127 RFLLASTSEVYGDPDVHPQPESYRGNVNTIGPRACYDEGKRVAETLAFEYYREHKVDIRV 186
Query: 178 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
+FN P R + R +++ I GK + G+ R + + + V+G+ R++
Sbjct: 187 ARIFNTYGP-RMLENDGRVVSNFIVQALQGK-PLTVFGDGSQTRSFCYVSDLVEGLMRLM 244
Query: 238 QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKF 297
D L T+ +A++ E Q L +PK
Sbjct: 245 NGDYVGPVNLGNPGEYTILQLAEKIQNAINPDAELIYQP-------------LPEDDPKQ 291
Query: 298 YRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSE 341
+P D+ + A+T L W+P L++ M +E R E
Sbjct: 292 RQP---DITL-----AKTYLDWQPTIPLDQGLAMTIEDFKSRHE 327
>gi|2558973 (AF025396) DdhB [Vibrio anguillarum]
Length = 360
Score = 50.0 bits (117), Expect = 3e-05
Identities = 42/170 (24%), Positives = 79/170 (45%), Gaps = 6/170 (3%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYG-TYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
K ITG TG G +L+ L EMG +V G + ++ + + ++ + E D
Sbjct: 9 KKVFITGHTGFKGGWLSLWLQEMGAIVKGYSLPAPTTPSLFEQGKVWAGMRTE----EGD 64
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D + + + P+ V+++AAQ V +S+ +P+ T +G V LLEA++ V
Sbjct: 65 IRDFTHMRQSMYEFKPEIVFHMAAQPLVRLSYHEPIETYSTNVMGTVYLLEAVKQVGGVK 124
Query: 123 RFYQASTSEMFGKVQQT-PQIEETPFYPRSPYGIAKLYAHWMTVNYRESY 171
++ + + + E+ P PY +K A + +YR+S+
Sbjct: 125 AVVNITSDKCYENREWVWGYREDEPMGGYDPYSNSKGCAELVASSYRQSF 174
>gi|3256770|dbj|BAA29453| (AP000002) 318aa long hypothetical
UDP-glucose 4-epimerase [Pyrococcus horikoshii]
Length = 318
Score = 50.0 bits (117), Expect = 3e-05
Identities = 69/331 (20%), Positives = 138/331 (40%), Gaps = 50/331 (15%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL-GIAQHPKLHLVEYDLTD 65
++TG G G++L L+E GY V R L+ + + G + ++ D+ D
Sbjct: 4 LVTGGAGFIGSHLVDRLMEEGYKV----RVLDDLSAGSLKNIEGWLGNENFEFIKGDMRD 59
Query: 66 ---LSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+S +V+ ++ V++LAA V + P + + NLL A+R K
Sbjct: 60 VEIVSKAVKDVD-----AVFHLAANPEVRIGSQSPELLYETNVLITYNLLNAVRNSGVKY 114
Query: 123 RFYQASTSEMFGKVQQTPQIEE-TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
+ S+S ++G + P E+ P P S YG AKL A + Y ++ A
Sbjct: 115 LVF-TSSSTVYGDAKVIPTPEDYAPLEPISVYGAAKLAAEALISGYAHTFDFRALI---- 169
Query: 182 NHESPLRARDFVTRKITHAIAMIKLGKL-----DVLKLGNLDAKRDWGFAKEYVDGMWRM 236
+R + + ++ H + + KL ++ LG+ ++ + + +DG+ ++
Sbjct: 170 -----IRLANIIGKRSNHGVIYDFINKLKANPNELEILGDGTQRKSYLHISDTIDGIMKL 224
Query: 237 LQ-----ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLV 291
+ + D + L TV++ + + +++ +K GVD G
Sbjct: 225 FEHFLNGEERVDFYNLGNEDWITVKEIAEIVSEEMNLNPRFKFTG----GVDGGRG---- 276
Query: 292 TINPKFYRPAEVDLLIGNPAKARTKLGWEPK 322
+V L++ + KA+ + GW+P+
Sbjct: 277 -------WKGDVKLMLLSIEKAK-RTGWKPR 299
>gi|119687|sp|P26503|EXOB_RHIME UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) >gi|95226|pir||S16300 UDPglucose
4-epimerase (EC 5.1.3.2) - Rhizobium meliloti
>gi|581518|emb|CAA41127| (X58126) UDP-glucose
4-epimerase [Sinorhizobium meliloti]
Length = 328
Score = 49.6 bits (116), Expect = 4e-05
Identities = 83/364 (22%), Positives = 122/364 (32%), Gaps = 61/364 (16%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRS-SSLNFWRINELGIAQHPKLH 57
M N + ++ G G G++ L GY VVY W + E G
Sbjct: 1 MQNNNILVVGGAGYIGSHTCLQLAAKGYQPVVYDNLSNGHEEFVKWGVLEKG-------- 52
Query: 58 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
D+ D +L P+ + + AA VG S P D +G + LL A
Sbjct: 53 ----DIRDRQRLDEVLARHKPRAILHFAAMIEVGESVKDPAAFYDNNVIGTLTLLSAALA 108
Query: 118 VNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 177
F +ST +G P E P +PYG K W+ + YG++
Sbjct: 109 AGIDA-FVFSSTCATYGLPDSVPMDESHKQAPINPYGRTK----WICEQALKDYGLYKGL 163
Query: 178 GILFNHESPLRARDFVTR------KITHAIAMI---KLGKLDVLKLGNLDAK-RDWGFAK 227
+ DF R THAI + LG+ + K+ D RD +
Sbjct: 164 RSVILRYFNAAGADFEGRIGEWHEPETHAIPLAIDAALGRREGFKVFGTDYDTRDGTCVR 223
Query: 228 EYV------DGMWR----MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAE 277
+Y+ D R +L+ E L T TV++ + G AE
Sbjct: 224 DYIHVLDLADAHVRAVDYLLEGGESVALNLGTGTGTTVKELLDAIEKVAKRPFNI-GYAE 282
Query: 278 RECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADV 337
R R + L+ N KAR LGWEP+ L +
Sbjct: 283 R--------------------REGDSTTLVANNDKARQVLGWEPQYDLAAITESAWNWHS 322
Query: 338 RRSE 341
RR++
Sbjct: 323 RRNQ 326
>gi|2494667|sp|Q57301|GALE_YEREN UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1163935 (U43708) Description: homolog of galE; UDP
galactose epimerase homolog; Method: conceptual
translation supplied by author [Yersinia enterocolitica]
>gi|1197656 (U46859) GalE [Yersinia enterocolitica (type
0:8)] >gi|1588475|prf||2208415E UDP-galactose
4-epimerase [Yersinia enterocolitica]
Length = 336
Score = 49.2 bits (115), Expect = 5e-05
Identities = 73/335 (21%), Positives = 137/335 (40%), Gaps = 28/335 (8%)
Query: 5 SAVITGITGQDGAYLAQLLLEMG--YVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
S +ITG G G++ LLE G VV SS+ + R++++ + P + D
Sbjct: 2 SILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINSSAESLARVSKI-CGRKPNFY--HGD 58
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D S + V + A VG S ++P+ VG++ LLE + + N K
Sbjct: 59 ILDRSCLKLIFSSHKIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVK- 117
Query: 123 RFYQASTSEMFGKVQQTPQIEETPF-YPRSPYGIAKLYAHWMTVNYRESYGIFAASGI-L 180
+ +S++ ++G+ + P E+ +PYG +K+ + ++ ++ ++ + +
Sbjct: 118 KLIFSSSATVYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKDFSLAHPDYSITALRY 177
Query: 181 FN----HESPLRARD--FVTRKITHAIAMIKLGKLD-VLKLGNLDAKRDWGFAKEYVDGM 233
FN H S L D + I + +GKL +L GN D ++Y+ M
Sbjct: 178 FNPVGAHPSGLIGEDPNGKPNNLLPFITQVAIGKLSKLLVYGNDYDTPDGSGIRDYIHVM 237
Query: 234 WRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTI 293
L T + T+ + S + + E++ + D+ S
Sbjct: 238 --DLAEGHLSTLINLTSGFRIYNLGTGVGYSVLHMIKEFERITGKNIPFDIVS------- 288
Query: 294 NPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 328
RP ++ +P A +LGW K TL ++
Sbjct: 289 ----RRPGDIAECWASPELAHLELGWYAKRTLVDM 319
>gi|4995692|emb|CAB44218.1| (AJ011653) UDP-galactose 4-epimerase
[Lactococcus lactis]
Length = 326
Score = 48.8 bits (114), Expect = 7e-05
Identities = 77/333 (23%), Positives = 136/333 (40%), Gaps = 32/333 (9%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 64
+ ++ G G G++ +L+ GY V + N + +++ K+ E D+
Sbjct: 2 TVLVLGGAGYVGSHAVDMLVNRGYDV------AVVDNLVTGHREAVSE--KVRFYEGDVR 53
Query: 65 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 124
D + + E + + + A S VG S +PL + GA +LE + K
Sbjct: 54 DHAFLASVFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEFGVKHIV 113
Query: 125 YQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHE 184
+ +ST+ FG +++P E+TP P +PYG +KL M ++ + + FN
Sbjct: 114 F-SSTAATFGIPEESPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVALRYFNVA 172
Query: 185 SPLRARD-----FVTRKITHAIAMI---KLGKLDVLKLGNLDAKR-DWGFAKEYVDGMWR 235
A+D + TH I +I LG+ + + + D + D ++Y+D
Sbjct: 173 G---AKDDGSIGEAHKNETHLIPIILQTALGQREFITIYGDDYQTPDGTCIRDYID---- 225
Query: 236 MLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 295
M E L ++ D +L +S LE A + G ++ S
Sbjct: 226 MEDLIEAHIKALEYLKSGGKSDQFNLGSSKGYSNLEVLETARKVTGKEIPS-------QM 278
Query: 296 KFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 328
RP + D L+ + KA LGW+ K LE +
Sbjct: 279 GERRPGDPDELVADSTKAGEILGWKVKNDLEHI 311
>gi|2921560|gb|AAC04827.1| (AF039306) UDP-glucose 4'-epimerase
[Bradyrhizobium japonicum]
Length = 330
Score = 48.8 bits (114), Expect = 7e-05
Identities = 81/336 (24%), Positives = 126/336 (37%), Gaps = 53/336 (15%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
+ ++TG G G++ + L GY VVY G LV D
Sbjct: 6 TVLVTGGAGYIGSHACRALSAAGYQPVVYDNL------------STGHRSFVAGPLVIGD 53
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
L D ++ R V + AA S VG S P G ++LL+A+R
Sbjct: 54 LLDDAALARAFADHKVTAVMHFAAASLVGESMTDPQKYYINNVQGTLSLLQAMRNAGCH- 112
Query: 123 RFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 182
R +ST ++G E+ P P +PYG +K M +YR +YG A FN
Sbjct: 113 RIVFSSTGAVYGNADSKELPEDFPCAPINPYGASKWMIERMLADYRAAYGFGAFCLRYFN 172
Query: 183 HESPLRA------RDFVTRKITHAIAMIKLGKLDVLKLG------NLDAKRDW----GFA 226
A RD T I A+ ++ G +D G + A RD+ A
Sbjct: 173 ASGADPAGGIGELRDNETHLIPRAMMALQ-GHVDFAVFGDDYDTPDGTAIRDYIHVTDLA 231
Query: 227 KEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVAS 286
+V + + Q +F L T +VR+ ++ +E G +V
Sbjct: 232 AAHVAALKLLEQGHAGGSFNLGTGSGFSVREILN--------------AIRQETGREVPH 277
Query: 287 GKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPK 322
T+ P+ R + L+ +P+ AR L + P+
Sbjct: 278 -----TVKPR--RAGDPTYLVADPSAARKVLNFVPR 306
>gi|132502|sp|P26397|RFBG_SALTY CDP-GLUCOSE 4,6-DEHYDRATASE
>gi|96842|pir||S15305 rfbG protein - Salmonella
typhimurium >gi|47895|emb|CAA40121| (X56793) CDP-glucose
4,6-dehydratase [Salmonella enterica]
Length = 359
Score = 48.4 bits (113), Expect = 9e-05
Identities = 37/122 (30%), Positives = 61/122 (49%), Gaps = 17/122 (13%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRS----SSLNFWRINELGIAQHPKLHLV 59
K +TG TG G++L+ L EMG +V G + S R+N+L +
Sbjct: 10 KRVFVTGHTGFKGSWLSLWLTEMGAIVKGYALDAPTVPSLFEIVRLNDL----------M 59
Query: 60 EYDLTDLSSSVRLLELAA---PKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
E + D+ +L A P+ V+++AAQ V +S++QP+ T +G V+LLE ++
Sbjct: 60 ESHIGDIRDFEKLRNSIAEFKPEIVFHMAAQPLVRLSYEQPIETYSTNVMGTVHLLETVK 119
Query: 117 IV 118
V
Sbjct: 120 QV 121
>gi|4128133|emb|CAA06840| (AJ006068) dTDP-D-glucose 4,6-dehydratase
[Homo sapiens] >gi|5737699|gb|AAD50061.1|AF048686_1
(AF048686) dTDP-glucose 4,6-dehydratase like protein
[Homo sapiens]
Length = 350
Score = 48.4 bits (113), Expect = 9e-05
Identities = 72/331 (21%), Positives = 134/331 (39%), Gaps = 33/331 (9%)
Query: 4 KSAVITGITGQDGAYLAQLLLE--MGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEY 61
K ++TG G +++ L+E Y++ + + + + Q+ K ++
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKF--IQG 75
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
D+ D L E V + AAQ+ V +SF + T + G L+ A +
Sbjct: 76 DICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVE 135
Query: 122 IRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYG----IFAAS 177
+F ST E++G E +P P +PY +K A +Y E Y I +S
Sbjct: 136 -KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 178 GILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML 237
+ H+ P + I I++++ + + L R++ +A + V+ +L
Sbjct: 195 NVYGPHQYP-------EKVIPKFISLLQHNRKCCIHGSGLQT-RNFLYATDVVEAFLTVL 246
Query: 238 QADEP-DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPK 296
+ +P + + + TN +V V LA + + E ++E E VD + + N
Sbjct: 247 KKGKPGEIYNIGTNFEMSV---VQLAKELIQLIKETNSESEMENWVDYVNDR---PTNDM 300
Query: 297 FYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
Y P + + + G LGW PK +E
Sbjct: 301 RY-PMKSEKIHG--------LGWRPKVPWKE 322
>gi|2842588|sp|Q58455|YA55_METJA HYPOTHETICAL PROTEIN MJ1055
>gi|2127791|pir||F64431 capsular polysaccharide
biosynthesis protein I homolog - Methanococcus
jannaschii >gi|1591707 (U67548) capsular polysaccharide
biosynthesis protein I [Methanococcus jannaschii]
Length = 326
Score = 48.0 bits (112), Expect = 1e-04
Identities = 76/345 (22%), Positives = 140/345 (40%), Gaps = 44/345 (12%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFW------RINELGIAQHPKLH 57
K+ ++TG G G +L++ L++ Y + N++ + NE+ + +
Sbjct: 4 KNILVTGSAGFIGFHLSKYLMD-NYEDLKVIGIDNLNNYYNPVLKEKRNEI-LKNYENYT 61
Query: 58 LVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRI 117
++ D +D V L+ + +L AQ+ V S P +G +N+ E R
Sbjct: 62 FIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARR 121
Query: 118 VNPKIRFYQASTSEMFGKVQQTPQIEETPF-YPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
+ + Y AS+S ++G ++ P E+ P S Y K M Y YGI
Sbjct: 122 FDIEKVVY-ASSSSVYGGNRKIPFSEDDRVDKPISLYASTKRSNELMAHVYHHLYGIKMI 180
Query: 177 SGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRM 236
F D K I + K +++V GN++ RD+ + + VDG+ R
Sbjct: 181 GLRFFTVYGEYGRPDMAYFKFAKNILLGK--EIEVYNYGNME--RDFTYISDVVDGILRA 236
Query: 237 LQAD-EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINP 295
++ D + + F L ++ + F+ L ++ L K +
Sbjct: 237 IKKDFDYEIFNLGNSKPVKLMYFIEL----IEKYLNKKAK-------------------K 273
Query: 296 KFYRPAEVDLL--IGNPAKARTKLGWEPKTTLEE----LCHMMME 334
KF + D+L + +K+ LG++PK T+EE C+ +E
Sbjct: 274 KFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNWFLE 318
>gi|1710031|sp|P55293|RBB2_ECOLI DTDP-GLUCOSE 4,6-DEHYDRATASE
>gi|799232|gb|AAC63612.1| (AF125322) RmlB [Escherichia
coli]
Length = 361
Score = 48.0 bits (112), Expect = 1e-04
Identities = 61/265 (23%), Positives = 104/265 (39%), Gaps = 36/265 (13%)
Query: 81 VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--------NPKIRFYQASTSEM 132
V +LAA+S V S P + VG LLEA R RF+ ST E+
Sbjct: 77 VMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHISTDEV 136
Query: 133 FGKVQQTPQI----------EETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 182
+G + ++ E T + P SPY +K + + ++ +YG+ N
Sbjct: 137 YGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVSNCSN 196
Query: 183 HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML-QADE 241
+ P F + I I GK + G D RDW + +++ ++ ++ +
Sbjct: 197 NYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDWLYVEDHARALYTVVTEGKA 252
Query: 242 PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPA 301
+T+ + + + D V +D ++ K ++ RE T V P R
Sbjct: 253 GETYNIGGHNEKKNIDVVFTICDLLD-EIVPKEKSYRE-------QITYVADRPGHDRRY 304
Query: 302 EVDLLIGNPAKARTKLGWEPKTTLE 326
+D K +LGW+P+ T E
Sbjct: 305 AID-----ADKISRELGWKPQETFE 324
>gi|4581414|emb|CAB40159.1| (AL031295) dJ886K2.3(GALE
(UDP-galactose-4-epimerase)) [Homo sapiens]
Length = 348
Score = 48.0 bits (112), Expect = 1e-04
Identities = 71/355 (20%), Positives = 135/355 (38%), Gaps = 56/355 (15%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYV------VYGTYRRSSSL--NFWRINELGIAQHPK 55
+ ++TG G G++ LLE GY+ + +R SL + R+ EL
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL---TGRS 59
Query: 56 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
+ E D+ D + RL + + V + A VG S +PL + G + LLE +
Sbjct: 60 VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 116 RIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYP-RSPYGIAKLYAHWMTVNYRESYGIF 174
+ K + +S++ ++G Q P E P +PYG +K + M + ++ +
Sbjct: 120 KAHGVKNLVF-SSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 175 AASGILFNHESPLRAR---------DFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG- 224
A +L + +P A + + ++ + +G+ + L + D + G
Sbjct: 179 NA--VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 225 ----------FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKG 274
AK ++ + ++ + + L T +V V A ++ +K
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
Query: 275 QAERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
A RE +V NP+ A+ +LGW L+ +C
Sbjct: 297 VARRE---------------------GDVAACYANPSLAQEELGWTAALGLDRMC 330
>gi|2129759|pir||S62783 UDPglucose 4-epimerase (EC 5.1.3.2) -
Arabidopsis thaliana >gi|1143392|emb|CAA90941| (Z54214)
uridine diphosphate glucose epimerase [Arabidopsis
thaliana]
Length = 351
Score = 47.6 bits (111), Expect = 1e-04
Identities = 76/352 (21%), Positives = 141/352 (39%), Gaps = 51/352 (14%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVV--YGTYRRSSSLNFWRINEL-GIAQHPKLHLVE 60
++ ++TG G G + LL+ G+ V + S R+ EL G KL
Sbjct: 7 QNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL 66
Query: 61 YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP 120
DL + +L V + A VG S ++ D VG +NL E + N
Sbjct: 67 GDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVEKGRRYFDNNLVGTINLYETMAKYNC 126
Query: 121 KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL 180
K+ + +S + ++G+ ++ P +E+ +PYG KL+ + + +++ + IL
Sbjct: 127 KMMVFSSSAT-VYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRI--IL 183
Query: 181 FNHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLD-------AKRDWG 224
+ +P+ A + + + I + +G+L L + D A RD+
Sbjct: 184 LRYFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYI 243
Query: 225 FAKEYVDG---MWRMLQADEP---DTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAER 278
+ DG R L AD + L T + +V + V+
Sbjct: 244 HVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVA------------------ 285
Query: 279 ECGVDVASGKTL-VTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
+ ASGK + + + P+ R + + + KA +LGW+ K ++E+C
Sbjct: 286 --AFEKASGKKIPIKLCPR--RSGDATAVYASTEKAEKELGWKAKYGVDEMC 333
>gi|1197641 (U46859) DdhB [Yersinia enterocolitica (type 0:8)]
Length = 358
Score = 47.3 bits (110), Expect = 2e-04
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYG---------TYRRSSSLNFWRINELGIAQH 53
+K ITG TG G++L+ L MG V G + ++++ I+E+G
Sbjct: 9 DKRVFITGHTGFKGSWLSLWLQNMGAKVKGYALDAPTKPSLFEAANVADGMISEVG---- 64
Query: 54 PKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLE 113
D+ + + ++ + P+ V+++AAQS V +S+ +P+ T +G V LLE
Sbjct: 65 --------DIRNYAQLLKSINDFKPEIVFHMAAQSLVRLSYLEPVETYSTNVMGTVYLLE 116
Query: 114 AIRIVNPKIRFYQASTSEMF-GKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESY 171
A+R V ++ + + K E+ PY +K A +T +YR S+
Sbjct: 117 ALRHVGGAKAIVNVTSDKCYENKEWVWGYREDESMGGYDPYSNSKGCAELVTSSYRNSF 175
>gi|2621436 (AE000823) UDP-glucose 4-epimerase related protein
[Methanobacterium thermoautotrophicum]
Length = 332
Score = 47.3 bits (110), Expect = 2e-04
Identities = 72/329 (21%), Positives = 127/329 (37%), Gaps = 35/329 (10%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
K ++TG G G+ L L + G V SSS E I ++ + V+ D+
Sbjct: 12 KCVLVTGGAGCVGSNLTGNLAKAGANVIILDNLSSSY------EWNIPEYENIEFVKGDI 65
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
D R+ + P V++LAA S D P + G+G + +LE ++V +
Sbjct: 66 LDDEVLKRVFK-ERPDYVFHLAAHFANQNSVDNPEKDLLVNGLGILKVLEYAQLVGVERF 124
Query: 124 FYQASTSEMFGKVQQTP-QIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFN 182
Y +S ++G + P + + +PY + KL T + Y + + FN
Sbjct: 125 VYSSSGCGVYGLDSKIPFEEHDISISLHTPYQVTKLLGELYTNYFHNLYEMPIVNARFFN 184
Query: 183 ----HESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQ 238
E P + R+ + A + + + G+ RDW F ++ V G+ M
Sbjct: 185 VFGPGEVPGKYRNVIPNFFYWA-----MNQQPLPITGDGSETRDWTFVEDIVRGLMAM-- 237
Query: 239 ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFY 298
R E + + ++L + +E G ++ V P+
Sbjct: 238 ----------GVRREAIGEAINLGSGTEHQVIEMAGIIN-----ELTENPAGVVYRPRRD 282
Query: 299 RPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
A+ LL + KAR L +EP+ + E
Sbjct: 283 WDAKTRLL-SSIDKARRLLDYEPQVSFRE 310
>gi|4008544|emb|CAA22513| (AL034492) putative nucleotide-sugar
dehydratase [Streptomyces coelicolor]
Length = 330
Score = 47.3 bits (110), Expect = 2e-04
Identities = 53/189 (28%), Positives = 79/189 (41%), Gaps = 14/189 (7%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
+ A++TG G G++L LL+ G V ++ R N + + V D
Sbjct: 17 RRALVTGGAGFVGSHLCGRLLDAGTEVVCLDNLATGS---RANVADLERRRGFRFVRGDA 73
Query: 64 TDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
TD ++ L L + V + A + PL T D+ G N LE R
Sbjct: 74 TDPAA---LRGLPGRFDLVLHFACPASPADYLRLPLETLDVGSTGTRNALE--RAHADGA 128
Query: 123 RFYQASTSEMFGKVQQTPQIEE-----TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAAS 177
RF ASTSE++G + PQ E P PRS Y +K +A + +R+ +G A
Sbjct: 129 RFLLASTSEVYGDPLEHPQRETYWGNVNPIGPRSVYDESKRFAEALVTAHRQVHGTDTAI 188
Query: 178 GILFNHESP 186
+FN P
Sbjct: 189 VRIFNTYGP 197
>gi|4234785|gb|AAD12953.1| (AF078135) unknown [Leptospira
borgpetersenii]
Length = 281
Score = 47.3 bits (110), Expect = 2e-04
Identities = 54/258 (20%), Positives = 105/258 (39%), Gaps = 29/258 (11%)
Query: 65 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 124
D+S + +L K V +LA Q++V S+ + + +G N L+ + + F
Sbjct: 37 DVSDPLTWSKLPETKSVIHLAGQTYVPDSWKDSRSFINSNVMGTQNALDYALKYDAQFVF 96
Query: 125 YQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILFNHE 184
A ++GK ++ P E P +PY ++K A + Y + + LFN
Sbjct: 97 ISAY---LYGKPEKLPISETHRIAPNNPYALSKHLAEQVCEFYSKFKNMNIIVLRLFNVY 153
Query: 185 SPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRML-QADEPD 243
P + DF+ I + K +++ +L KRD+ + ++ ++ + L
Sbjct: 154 GPGQRGDFLIPTILKQVKTKK-----EIRVLDLSPKRDYIYLEDILNSISSALFPITGFH 208
Query: 244 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRPAEV 303
TF + + + +V + +S+A L + + R E+
Sbjct: 209 TFNIGSGVSYSVEEVISIAQEIAHTSLPVLSECKE--------------------RKEEI 248
Query: 304 DLLIGNPAKARTKLGWEP 321
++ N +KA+ LGWEP
Sbjct: 249 FDVVANISKAKEVLGWEP 266
>gi|3874971|emb|CAB16861.1| (Z99709) similar to NAD dependant
epimerase/dehydratase family; cDNA EST EMBL:C10103 comes
from this gene; cDNA EST EMBL:D66400 comes from this
gene; cDNA EST EMBL:D70143 comes from this gene; cDNA
EST yk493h11.3 comes from t...
Length = 347
Score = 46.9 bits (109), Expect = 3e-04
Identities = 78/348 (22%), Positives = 143/348 (40%), Gaps = 45/348 (12%)
Query: 7 VITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKL--HLVEYDLT 64
++TG G G++ LL GY V +++++ N + + + +L V +
Sbjct: 4 LVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISDEHGNAISLKRVAQLTGKDVPFQNV 63
Query: 65 DLSSSVRLLELAAPKE---VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPK 121
D+ L ++ + + + +LAA VG S +PL V ++NL++ N K
Sbjct: 64 DVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKYNVK 123
Query: 122 IRFYQASTSEMFGKVQQTPQIE--ETPFYPRSPYG------------IAKLYAHWMTVNY 167
F +S++ ++G + P E +T +PYG + K W V
Sbjct: 124 -NFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNVVLL 182
Query: 168 RESYGIFAASGILFNHESPLRARD--FVTRKITHAIAMIKLGKLDVLKL-GNLDAKRDWG 224
R + A H+S L D V + ++ + +GKL VL + G+ D
Sbjct: 183 RYFNPVGA-------HKSGLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGT 235
Query: 225 FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDF---VSLAASAVDIQLEWKGQAERECG 281
++Y+ D V A +R +TV + + + V + A ++
Sbjct: 236 GVRDYIH------VVDLAKGHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKK-- 287
Query: 282 VDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
SG+ + + RP +V + +P+ A+ KLGW +T LEE+C
Sbjct: 288 ---VSGRD-IPVKIGVPRPGDVASVYCDPSLAQEKLGWRAETGLEEMC 331
>gi|581659|emb|CAA50767| (X71970) rfbB [Shigella flexneri]
Length = 361
Score = 46.9 bits (109), Expect = 3e-04
Identities = 63/284 (22%), Positives = 107/284 (37%), Gaps = 36/284 (12%)
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 118
D+ D + R+ A + V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAVAMSRIFRTAPARRVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 119 -----NPKIRFYQASTSEMFGKVQQTPQIEETPFYP----------RSPYGIAKLYAHWM 163
RF+ ST E++G + + P SPY +K +
Sbjct: 118 LNDEKKKSFRFHHISTDEVYGDLPHPDEANNNETLPLFTETTTKRQNSPYSASKASNDHL 177
Query: 164 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 223
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 224 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 282
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 283 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
T V P R +D K +LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----ADKISRELGWKPQETFE 324
>gi|541221|pir||S41534 rfbB protein - Shigella flexneri
Length = 361
Score = 46.9 bits (109), Expect = 3e-04
Identities = 63/284 (22%), Positives = 107/284 (37%), Gaps = 36/284 (12%)
Query: 62 DLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV--- 118
D+ D + R+ A + V +LAA+S V S P + VG LLEA R
Sbjct: 58 DICDAVAMSRIFRTAPARRVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 119 -----NPKIRFYQASTSEMFGKVQQTPQIEETPFYP----------RSPYGIAKLYAHWM 163
RF+ ST E++G + + P SPY +K +
Sbjct: 118 LNDEKKKSFRFHHISTDEVYGDLPHPDEANNNETLPLFTETTTKRQNSPYSASKASNDHL 177
Query: 164 TVNYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDW 223
++ +YG+ N+ P F + I I GK + G D RDW
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYH---FPEKLIPLVILNALEGKALPI-YGKGDQIRDW 233
Query: 224 GFAKEYVDGMWRML-QADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGV 282
+ +++ ++ ++ + +T+ + + + D V +D ++ K ++ RE
Sbjct: 234 LYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLD-EIVPKEKSYRE--- 289
Query: 283 DVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLE 326
T V P R +D K +LGW+P+ T E
Sbjct: 290 ----QITYVADRPGHDRRYAID-----ADKISRELGWKPQETFE 324
>gi|4503891|ref|NP_000394.1|| galactose-4-epimerase, UDP-
>gi|2494659|sp|Q14376|GALE_HUMAN UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1119217 (L41668) UDP-galactose-4-epimerase [Homo
sapiens] >gi|2947219 (AF022382) UDP-galactose 4'
epimerase [Homo sapiens] >gi|1585500|prf||2201313A UDP
galactose 4'-epimerase [Homo sapiens]
Length = 348
Score = 46.5 bits (108), Expect = 3e-04
Identities = 70/355 (19%), Positives = 135/355 (37%), Gaps = 56/355 (15%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYV------VYGTYRRSSSL--NFWRINELGIAQHPK 55
+ ++TG G G++ LLE GY+ + +R SL + R+ EL
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL---TGRS 59
Query: 56 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
+ E D+ D + RL + + V + A VG S +PL + G + LLE +
Sbjct: 60 VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 116 RIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYP-RSPYGIAKLYAHWMTVNYRESYGIF 174
+ K + +S++ ++G Q P E P +PYG +K + M + ++ +
Sbjct: 120 KAHGVKNLVF-SSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 175 AASGILFNHESPLRAR---------DFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG- 224
+ +L + +P A + + ++ + +G+ + L + D + G
Sbjct: 179 --NVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 225 ----------FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKG 274
AK ++ + ++ + + L T +V V A ++ +K
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
Query: 275 QAERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
A RE +V NP+ A+ +LGW L+ +C
Sbjct: 297 VARRE---------------------GDVAACYANPSLAQEELGWTAALGLDRMC 330
>gi|633875|bbs|154466 (S72887) CDP-D-glucose 4,6-dehydratase, Eod
[Yersinia pseudotuberculosis, serogroup VA, Peptide, 357
aa] [Yersinia pseudotuberculosis]
Length = 357
Score = 45.7 bits (106), Expect = 6e-04
Identities = 79/351 (22%), Positives = 132/351 (37%), Gaps = 61/351 (17%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL-NFWRINELGIAQHPKLHLVEYD 62
K +TG TG G +L+ L MG V G + ++ + + + ++ D
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIG----D 65
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D + + + P+ V+++AAQ V +S+ +P+ T +G V LLEAIR V
Sbjct: 66 IRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVK 125
Query: 123 RFYQASTSEMF-GKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
++ + + K E PY +K A +T +YR S+ A G
Sbjct: 126 AVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYG--- 182
Query: 182 NHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADE 241
H A+ ++ GN+ DW + D +L+A E
Sbjct: 183 ----------------QHGTAVA------TVRAGNVIGGGDWALDRIVPD----ILRAFE 216
Query: 242 PDTFVLATNR---------TETVRDFVSLAASAVDIQLEW-KGQAERECGVDVASGKTLV 291
V+ N E + ++ LA E+ +G D K +V
Sbjct: 217 QSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIV 276
Query: 292 TINPKFY------------RPAEVDLLIGNPAKARTKLGWEPK----TTLE 326
N K++ P E L + +KA+ +LGW P+ TTLE
Sbjct: 277 EQNVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLE 327
>gi|544367|sp|P35673|GALE_ERWAM UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1073276|pir||A36951 UDPglucose 4-epimerase (EC
5.1.3.2) - Erwinia amylovora >gi|429078|emb|CAA53767|
(X76172) UDP-glucose 4-epimerase [Erwinia amylovora]
Length = 337
Score = 45.7 bits (106), Expect = 6e-04
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 14/218 (6%)
Query: 5 SAVITGITGQDGAYLAQLLLEMG--YVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
S ++TG G G++ LL+ G V+ +S + R+ +L E D
Sbjct: 2 SILVTGGAGYIGSHTVLSLLQRGDDVVILDNLSNASRESINRVEKL---TGKTATFFEGD 58
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
L D S + V + A VG S +PL G + LLE +R
Sbjct: 59 LLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVN- 117
Query: 123 RFYQASTSEMFGKVQQTPQIEETPF-YPRSPYGIAKLYAHWMTVNYRESYGIFAASGI-L 180
+F +S++ ++G P +E TP SPYG +KL + +Y ++ F +
Sbjct: 118 QFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEFKTIALRY 177
Query: 181 FN----HESPLRARD--FVTRKITHAIAMIKLGKLDVL 212
FN HES D + + IA + +G+L+ L
Sbjct: 178 FNPVGAHESGQMGEDPNGIPNNLLPYIAQVAIGRLEKL 215
>gi|730819|sp|P39630|SPSJ_BACSU SPORE COAT POLYSACCHARIDE
BIOSYNTHESIS PROTEIN SPSJ >gi|629079|pir||S39727
hypothetical protein - Bacillus subtilis
>gi|413996|emb|CAA51628| (X73124) ipa-72d [Bacillus
subtilis] >gi|2636318|emb|CAB15809| (Z99123) alternate
gene name: ipa-72d [Bacillus subtilis]
Length = 315
Score = 44.9 bits (104), Expect = 0.001
Identities = 77/339 (22%), Positives = 134/339 (38%), Gaps = 55/339 (16%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHP--------- 54
KS +ITG G G +L+L R + +++L A HP
Sbjct: 3 KSYLITGGAGFIGLTFTKLML-----------RETDARITVLDKLTYASHPEEMEKLKQN 51
Query: 55 -KLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQ--PLTTTDITGVGAVNL 111
+ V+ D++ R + V + AA+S V S Q P TT++ +G L
Sbjct: 52 SRFRFVKGDISVQEDIDRAFD-ETYDGVIHFAAESHVDRSISQAEPFITTNV--MGTYRL 108
Query: 112 LEAIRIVNPKIRFYQASTSEMFG--KVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRE 169
EA+ K + ST E++G K E TP P +PY +K + + ++Y +
Sbjct: 109 AEAVLKGKAK-KLIHISTDEVYGDLKADDPAFTETTPLSPNNPYSASKASSDLLVLSYVK 167
Query: 170 SYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEY 229
++ + A N+ P + + + I I K G L V G+ RDW FA+++
Sbjct: 168 THKLPAIITRCSNNYGPYQHSE---KMIPTIIRHAKQG-LPVPLYGDGLQIRDWLFAEDH 223
Query: 230 VDGMWRMLQ-ADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGK 288
+ +L+ + + + + T ++ S + L+ G E V+ G
Sbjct: 224 CRAIKLILEKGTDGEVYNIGGGNERTNKELAS-------VILKHLGCEELFAHVEDRKG- 275
Query: 289 TLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
+ + Y N +K + +LGW + T EE
Sbjct: 276 -----HDRRYAI--------NASKLKNELGWRQEVTFEE 301
>gi|609642 (L33181) CDP-D-glucose-4,6-dehydratase [Yersinia
pseudotuberculosis] >gi|6580715|emb|CAB63291.1|
(AJ251712) CDP-glucose-4,6-dehydratase [Yersinia
pseudotuberculosis]
Length = 357
Score = 44.9 bits (104), Expect = 0.001
Identities = 42/170 (24%), Positives = 74/170 (42%), Gaps = 6/170 (3%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL-NFWRINELGIAQHPKLHLVEYD 62
K +TG TG G +L+ L MG V G + ++ + + + ++ D
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIG----D 65
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D + + + P+ V+++AAQ V +S+ +P+ T +G V LLEAIR V
Sbjct: 66 IRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVK 125
Query: 123 RFYQASTSEMF-GKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESY 171
++ + + K E PY +K A +T +YR S+
Sbjct: 126 AVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSF 175
>gi|5921157|dbj|BAA84593.1| (AB032523) dTDP-glucose 4,6-dehydratase
[Streptomyces avermitilis]
Length = 355
Score = 44.9 bits (104), Expect = 0.001
Identities = 64/284 (22%), Positives = 106/284 (36%), Gaps = 20/284 (7%)
Query: 54 PKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLE 113
P L V D+ D L++ V + AA+S V S +G LL
Sbjct: 51 PSLIFVHGDICDGPLVADLMD--GSDMVVHFAAESHVDRSVADAAEFVRTNVLGTHTLLR 108
Query: 114 AIRIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGI 173
A RF ST E++G + E+ P P SPY +K + + ++ ++G+
Sbjct: 109 AATDAAVD-RFVYISTDEVYGSIDSGSWTEDAPLEPNSPYSASKASSDLLARSFHRTHGL 167
Query: 174 FAASGILFNHESPLR-ARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDG 232
N+ P + + R +TH + K V G+ + RDW ++ G
Sbjct: 168 PVIITRCSNNYGPHQFPEKLIPRFVTHLLNGTK-----VPLYGDGENVRDWLHVDDHCRG 222
Query: 233 MWRMLQADEPDTF------VLATNRTETVR--DFVSLAASAVDIQLEWKGQAERECGVDV 284
+ + + P +NR T R D + + S V+ + KG +R +D+
Sbjct: 223 IALVAERGRPGEIYHIGGGTELSNRELTARLLDLLGVDWSMVEPVTDRKGH-DRRYSLDI 281
Query: 285 ASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 328
+ + P+ P E L + WEP T EL
Sbjct: 282 SKISAELGYAPRV--PFEEGLAQTVQWYVENRTLWEPLTARPEL 323
>gi|421277|pir||D47070 CDP-glucose-4,6-dehydratase - Yersinia
pseudotuberculosis >gi|155497|gb|AAB49400.1| (L01777)
CDP-glucose 4,6-dehydratase [Yersinia
pseudotuberculosis]
Length = 357
Score = 44.5 bits (103), Expect = 0.001
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL-NFWRINELGIAQHPKLHLVEYD 62
K +TG TG G +L+ L MG V G ++ + + + ++ D
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLAPPTVPSLFETARVADGMQSEIG----D 65
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D + + + P+ V+++AAQ V +S+ +P+ T +G V LLEAIR V
Sbjct: 66 IRDQNKLLEAIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVK 125
Query: 123 RFYQASTSEMF-GKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESY 171
++ + + K E PY +K A +T +YR S+
Sbjct: 126 AVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSF 175
>gi|120930|sp|P09609|GALX_KLULA GAL10 BIFUNCTIONAL PROTEIN
[INCLUDES: UDP-GLUCOSE 4-EPIMERASE (GALACTOWALDENASE);
ALDOSE 1-EPIMERASE (MUTAROTASE)] >gi|68389|pir||XUVKG
UDPglucose 4-epimerase (EC 5.1.3.2) - yeast
(Kluyveromyces marxianus var. lactis)
>gi|2819|emb|CAA30090| (X07039) transferase (GAL10) (AA
1 - 687) [Kluyveromyces lactis]
Length = 687
Score = 44.1 bits (102), Expect = 0.002
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
+K ++TG G G++ L E GY S+S ++ + + + ++ + D
Sbjct: 4 DKYCLVTGGAGYIGSHTVVELCEAGYKCIVVDNLSNS-SYESVARMELLTGQEIKFAKID 62
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
L +L +L + V + A VG S PLT VG +NLLE ++ + K
Sbjct: 63 LCELEPLNKLFDDYKIDSVLHFAGLKAVGESTQIPLTYYFNNIVGTINLLECMKSHDVK- 121
Query: 123 RFYQASTSEMFGKV----QQTPQIEETPFYPRSPYGIAKL 158
+ +S++ ++G P E P P +PYG KL
Sbjct: 122 KLVFSSSATVYGDATRFENMIPIPETCPTGPTNPYGKTKL 161
>gi|3451497|emb|CAA07653.1| (AJ007747) putative nucleotide sugar
epimerase/ dehydratase [Bordetella bronchiseptica]
Length = 313
Score = 44.1 bits (102), Expect = 0.002
Identities = 47/159 (29%), Positives = 69/159 (42%), Gaps = 18/159 (11%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
K ITGI GQ G+++A+LLLE G V G NF + HP L VE +
Sbjct: 2 KKVFITGICGQIGSHIAELLLERGDKVVGID------NFATGRREHLKDHPNLTFVEGSI 55
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQP---LTTTDITGVGAVNLLEAIRIVNP 120
D + +L+ P V + AA S+ P T VG N+++A + N
Sbjct: 56 ADHALVNQLIGDLQPDAVVHTAA------SYKDPDDWYNDTLTNCVGGSNVVQAAK-KNN 108
Query: 121 KIRFYQASTSEMFG--KVQQTPQIEETPFYPRSPYGIAK 157
RF T+ +G +QQ +++ S Y I+K
Sbjct: 109 VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISK 147
>gi|6319493|ref|NP_009575.1|GAL10| UDP-glucose 4-epimerase; Gal10p
>gi|585169|sp|P04397|GALX_YEAST GAL10 BIFUNCTIONAL
PROTEIN [INCLUDES: UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE); ALDOSE 1-EPIMERASE (MUTAROTASE)]
>gi|625246|pir||XEBYUG UDPglucose 4-epimerase (EC
5.1.3.2) - yeast (Saccharomyces cerevisiae)
>gi|536222|emb|CAA84961| (Z35888) ORF YBR019c
[Saccharomyces cerevisiae]
Length = 699
Score = 43.8 bits (101), Expect = 0.002
Identities = 41/159 (25%), Positives = 68/159 (41%), Gaps = 6/159 (3%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
+K ++TG G G++ L+E GY S+S + + L + + E D
Sbjct: 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNS-TYDSVARLEVLTKHHIPFYEVD 69
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
L D ++ + V + A VG S PL +G V LLE ++ N
Sbjct: 70 LCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS- 128
Query: 123 RFYQASTSEMFGKVQQTPQI----EETPFYPRSPYGIAK 157
+F +S++ ++G + P + EE P P +PYG K
Sbjct: 129 KFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTK 167
>gi|3703056 (AF082008) UDP-galactose-4-epimerase [Lactococcus
lactis]
Length = 326
Score = 43.0 bits (99), Expect = 0.004
Identities = 77/339 (22%), Positives = 132/339 (38%), Gaps = 44/339 (12%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGYVVYGT------YRRSSSLNFWRINELGIAQHPKLHL 58
+ ++ G G G++ +LL+ GY V +R S N +
Sbjct: 2 TVLVLGGAGYVGSHAVDMLLKRGYDVAVVDNLVTGHRESVPAN--------------VRF 47
Query: 59 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 118
E D+ D + + E + + + A S VG S +PL + GA +LE +
Sbjct: 48 YEGDVRDHAFLASVFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEF 107
Query: 119 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 178
K + +ST+ FG +++P E+TP P +PYG +KL M ++ + +
Sbjct: 108 GVKHIVF-SSTAATFGIPEKSPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVAL 166
Query: 179 ILFNHESPLRARD-----FVTRKITHAIAMI---KLGKLDVLKL-GNLDAKRDWGFAKEY 229
FN A+D + TH I +I LG+ + + + G+ D ++Y
Sbjct: 167 RYFNVAG---AKDDGSIGEAHKNETHLIPIILQTALGQREFITIYGDDYHTPDGTCIRDY 223
Query: 230 VDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKT 289
+D M E L + D +L +S LE A + G ++ S
Sbjct: 224 ID----MEDLIEAHIKALEYLKAGGQSDQFNLGSSKGYSNLEVLETARKVTGKEIPS--- 276
Query: 290 LVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 328
R + D L+ + KA LGW+ + LE +
Sbjct: 277 ----QMGERRAGDPDELVADSTKAGEILGWKAQNDLEHI 311
>gi|4206182 (U60828) UDP-galactose-4-epimerase [Lactococcus lactis]
Length = 330
Score = 43.0 bits (99), Expect = 0.004
Identities = 77/339 (22%), Positives = 132/339 (38%), Gaps = 44/339 (12%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGYVVYGT------YRRSSSLNFWRINELGIAQHPKLHL 58
+ ++ G G G++ +LL+ GY V +R S N +
Sbjct: 6 TVLVLGGAGYVGSHAVDMLLKRGYDVAVVDNLVTGHRESVPAN--------------VRF 51
Query: 59 VEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIV 118
E D+ D + + E + + + A S VG S +PL + GA +LE +
Sbjct: 52 YEGDVRDHAFLASVFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEF 111
Query: 119 NPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASG 178
K + +ST+ FG +++P E+TP P +PYG +KL M ++ + +
Sbjct: 112 GVKHIVF-SSTAATFGIPEKSPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVAL 170
Query: 179 ILFNHESPLRARD-----FVTRKITHAIAMI---KLGKLDVLKL-GNLDAKRDWGFAKEY 229
FN A+D + TH I +I LG+ + + + G+ D ++Y
Sbjct: 171 RYFNVAG---AKDDGSIGEAHKNETHLIPIILQTALGQREFITIYGDDYHTPDGTCIRDY 227
Query: 230 VDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKT 289
+D M E L + D +L +S LE A + G ++ S
Sbjct: 228 ID----MEDLIEAHIKALEYLKAGGQSDQFNLGSSKGYSNLEVLETARKVTGKEIPS--- 280
Query: 290 LVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 328
R + D L+ + KA LGW+ + LE +
Sbjct: 281 ----QMGERRAGDPDELVADSTKAGEILGWKAQNDLEHI 315
>gi|1330395 (U58761) coded for by C. elegans cDNA yk62h9.5; coded
for by C. elegans cDNA yk62h9.3; similarity to
DTDP-glucose 4,6-Dehydratases [Caenorhabditis elegans]
Length = 631
Score = 43.0 bits (99), Expect = 0.004
Identities = 56/287 (19%), Positives = 107/287 (36%), Gaps = 31/287 (10%)
Query: 50 IAQHPKLHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAV 109
+ P+ LV D+ + ++ + + E V + AA +++ + +
Sbjct: 53 VRNSPRYKLVLTDIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFI 112
Query: 110 NLLEAIRIVNPKIRFYQASTSEMFG----KVQQTPQIEETPFYPRSPYGIAKLYAHWMTV 165
LE +R RF ST E++G + ++E + P +PY K+
Sbjct: 113 QFLETVRTYGKIKRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVR 172
Query: 166 NYRESYGIFAASGILFNHESPLRARDFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGF 225
Y+ Y + + + N P + + + I + K+ ++ G+ R W F
Sbjct: 173 AYQTQYNLPIVTARMNNIYGP---NQWDVKVVPRFIEIAKVRGEYTIQ-GSGKQLRSWLF 228
Query: 226 AKEYVDGMWRMLQADE-PDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDV 284
+ G+ + + E + + L T + V D VD+QL G+A
Sbjct: 229 VDDASAGLKAVCEKGELHEIYNLGTYYEKNVADLAKTIQEEVDLQL---GRAHEP----- 280
Query: 285 ASGKTLVTINPKFY----RPAEVDLLIGNPAKARTKLGWEPKTTLEE 327
PK+ RP + + KA+ LGWEP T+ ++
Sbjct: 281 ----------PKYKSIPDRPYNDLRYLISIEKAKNDLGWEPTTSFDD 317
>gi|2621441 (AE000823) UDP-glucose 4-epimerase homolog
[Methanobacterium thermoautotrophicum]
Length = 316
Score = 43.0 bits (99), Expect = 0.004
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 11/192 (5%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 60
M + +TG G G++L LLE G V L+ + L H L ++E
Sbjct: 1 MRDMDVAVTGGLGFIGSHLTDELLERGNRVTVI----DDLSTGSPDNLRDPHHEDLEIIE 56
Query: 61 YDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
+ DL L ++ K+ V++ AA + V S PL + G + +L A
Sbjct: 57 GSINDLD----LEKVFQGKDYVFHQAALASVPESVRDPLRCHRVNATGTLRVLMASSRAG 112
Query: 120 PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 179
+ + ASTS ++G + P E+ P SPY ++K+ + + E G+ S
Sbjct: 113 VR-KVVNASTSAVYGNNPEIPLREDARPMPLSPYAVSKVTGEYYCQVF-EDQGLETVSLR 170
Query: 180 LFNHESPLRARD 191
FN P + D
Sbjct: 171 YFNVYGPRQRPD 182
>gi|5051487|emb|CAB44766.1| (AL078627) UDP glucose NAD dependant
epimerase/dehydratase [Schizosaccharomyces pombe]
Length = 355
Score = 41.8 bits (96), Expect = 0.009
Identities = 81/374 (21%), Positives = 142/374 (37%), Gaps = 69/374 (18%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
+ ++TG G G++ +LLE GY V+ S RI +L K+ + D
Sbjct: 8 TVLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKL---TGKKVIFHQVD 64
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
L D + ++ V + A VG S PL+ G +NL+E ++ N +
Sbjct: 65 LLDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVR- 123
Query: 123 RFYQASTSEMFGKVQQ----TPQIEETPFYPRSPYGIAKLY-AHWMTVNYRESYGIFAAS 177
F +S++ ++G + P E P SPYG KL+ + + + + + AA
Sbjct: 124 DFVFSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETKVNKSLNAAL 183
Query: 178 GILFN----HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVD 231
FN H S D + + IA + +G+LD L + F +Y
Sbjct: 184 LRYFNPGGAHPSGELGEDPLGIPNNLLPYIAQVAVGRLDHLNV----------FGDDY-- 231
Query: 232 GMWRMLQADEPDTFVLATNRTETVRDFVSLA--ASAVDIQLEWKGQAEREC---GVDVAS 286
T+ +RD++ + A A L++ Q C + +
Sbjct: 232 ----------------PTSDGTPIRDYIHVCDLAEAHVAALDYLRQHFVSCRPWNLGSGT 275
Query: 287 GKTLVTINPKFYRPAEVDL--------------LIGNPAKARTKLGWEPKTTLEELCHMM 332
G T+ + F + DL L NP +A +L W+ ++ E+C
Sbjct: 276 GSTVFQVLNAFSKAVGRDLPYKVTPRRAGDVVNLTANPTRANEELKWKTSRSIYEIC--- 332
Query: 333 MEADVRRSERDFPF 346
D R ++ +P+
Sbjct: 333 --VDTWRWQQKYPY 344
>gi|2983012 (AE000684) ADP-L-glycero-D-manno-heptose-6-epimerase
[Aquifex aeolicus]
Length = 310
Score = 41.8 bits (96), Expect = 0.009
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 28/205 (13%)
Query: 127 ASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LFNHES 185
AS++ ++G P E+ P + YG +KL + ++Y E Y G+ FN
Sbjct: 115 ASSAGVYGN-SPPPMREDKGLEPENIYGFSKLMMDHIAMDYMERYPEMNIVGLRYFNVYG 173
Query: 186 PLRARDFVTRKITH--AIAMIKLGKLDVLKLGNLDAKRDWGFAKEYVDGMWRMLQADEPD 243
P T + + A+ MIK + + K G + +RD+ + K+ + L+ +
Sbjct: 174 PREDYKGKTASMIYQLAVKMIKGERPRLFKWG--EQRRDFVYIKDVIKANLLALEKNVSG 231
Query: 244 TFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP-AE 302
F + T R + + VS+ + E + +C D FY+ E
Sbjct: 232 IFNVGTGRARSFNEIVSILNKELGTNYEIE---YFDCPYD-------------FYQKFTE 275
Query: 303 VDLLIGNPAKARTKLGWEPKTTLEE 327
DL K R LG+EP+ +LEE
Sbjct: 276 ADL-----TKIREALGYEPEYSLEE 295
>gi|120922|sp|P18645|GALE_RAT UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|112468|pir||S11223 UDPglucose 4-epimerase (EC
5.1.3.2) - rat >gi|57792|emb|CAA37897| (X53949)
UDP-galactose 4-epimerase (AA 1-347) [Rattus sp.]
Length = 347
Score = 41.4 bits (95), Expect = 0.011
Identities = 70/356 (19%), Positives = 132/356 (36%), Gaps = 59/356 (16%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYV------VYGTYRRSSSL--NFWRINELGIAQHPK 55
+ ++TG G G++ LLE GY + + R S+ + R+ EL
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQEL---TGRS 59
Query: 56 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
+ E D+ D ++ L + K V + A VG S +PL + G + LLE +
Sbjct: 60 VEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 116 RIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYP--RSPYGIAKLYAHWMTVNYRESYGI 173
R + K + +S++ ++GK P P + PYG +K + M + +
Sbjct: 120 RAMGVKSLVF-SSSATVYGK--PVPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRA--D 174
Query: 174 FAASGILFNHESPLRAR---------DFVTRKITHAIAMIKLGKLDVLKLGNLDAKRDWG 224
A + +L + P+ A + + ++ + +G+ + L + D + G
Sbjct: 175 TAWNAVLLRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDG 234
Query: 225 -----------FAKEYVDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWK 273
AK ++ + ++ + + L T +V V A ++ +K
Sbjct: 235 TGVRDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK 294
Query: 274 GQAERECGVDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEELC 329
A RE +V NP+ A +LGW L+ +C
Sbjct: 295 VVARRE---------------------GDVAACYANPSLAHEELGWTAALGLDRMC 329
>gi|2494663|sp|Q59678|GALE_PASHA UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|1304491 (U39043) uridine diphosphogalactose
4-epimerase [Pasteurella haemolytica]
Length = 338
Score = 40.2 bits (92), Expect = 0.025
Identities = 74/343 (21%), Positives = 134/343 (38%), Gaps = 46/343 (13%)
Query: 7 VITGITGQDGAY-LAQLLLE-MGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 64
++TG G G++ L +LL E VV SS ++ R+ ++ + + D+
Sbjct: 4 LVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQI---TGKSVKFYQGDIL 60
Query: 65 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 124
D ++ + V + A VG + + T G++ L+E + N
Sbjct: 61 DRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKANVNTIV 120
Query: 125 YQASTSEMFGKVQQTPQIEETPFY-PRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LFN 182
+ +S + ++G Q P +E P +PYG +K + + +++ +A + FN
Sbjct: 121 FSSSAT-VYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILEDTVKAFPQLSAVVLRYFN 179
Query: 183 ----HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLDAK-------RDWGFAKEY 229
HES L D + + I+ + +GKL L + D RD+ +
Sbjct: 180 RVGAHESGLIGEDPNGIPNNLMPFISQVAVGKLPQLSVFGGDYNTHDGTGVRDYIHVVDL 239
Query: 230 VDGMWRMLQADEPDT----FVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA 285
G + L + D + L T +V D V +A I + +K VD
Sbjct: 240 ALGHLKALDKHQNDAGFHVYNLGTGTGYSVLDMVKAFEAANGITIPYKV-------VD-- 290
Query: 286 SGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 328
RP ++ + P KA +LGWE + LE++
Sbjct: 291 ------------RRPGDIAVCYSAPQKALEQLGWETERGLEQM 321
>gi|2494670|sp|Q59745|EXOB_RHILT UDP-GLUCOSE 4-EPIMERASE
(UDP-GALACTOSE 4-EPIMERASE) (GALACTOWALDENASE)
>gi|1360122|emb|CAA65359| (X96507) UDP-glucose
4-epimerase [Rhizobium leguminosarum]
Length = 327
Score = 39.9 bits (91), Expect = 0.033
Identities = 68/284 (23%), Positives = 106/284 (36%), Gaps = 36/284 (12%)
Query: 60 EYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
E D+ D + +L P + + AA VG S P++ + +G + LL A +
Sbjct: 51 EGDIRDRARLDEVLAKHKPAAILHFAALIEVGESVKDPVSFYENNVIGTLTLLSAAQAAG 110
Query: 120 PKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGI 179
F +ST +G Q P E P +PYG K +Y + YG + +
Sbjct: 111 INA-FVFSSTCATYGLPQSVPLDETHRQVPINPYGRTKYIVEQALADY-DQYGSLRSVVL 168
Query: 180 LFNHESPLRARDFVTR------KITHAIAM---IKLGKLDVLKLGNLDAK-RDWGFAKEY 229
+ + + DF R THAI + LG+ K+ D + RD ++Y
Sbjct: 169 RYFNAA---GADFEGRIGEWHQPETHAIPLAIDAALGRRQGFKVFGSDYETRDGTCVRDY 225
Query: 230 VDGMWRMLQADEPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAEREC--GVDVASG 287
+ + D D V A D V+L G +E ++ S
Sbjct: 226 IHVL------DLADAHVRAVEYLLKGGDSVALNLGT------GTGTTVKELLGAIEEVSN 273
Query: 288 KTLVTINPKFY---RPAEVDLLIGNPAKARTKLGWEPKTTLEEL 328
+ P Y R + L+ N KAR LGW P+ L E+
Sbjct: 274 RPF----PVEYIGRREGDSHTLVANNDKARDVLGWVPQYDLSEI 313
>gi|2496715|sp|P55579|Y4NG_RHISN HYPOTHETICAL 42.8 KD PROTEIN Y4NG
>gi|2182542 (AE000087) Y4nG [Rhizobium sp. NGR234]
Length = 396
Score = 39.1 bits (89), Expect = 0.057
Identities = 43/155 (27%), Positives = 69/155 (43%), Gaps = 17/155 (10%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
K+A++TG +G G L++ LL G TY R LN G + HP L ++ +
Sbjct: 50 KTALVTGGSGYFGELLSKQLLRQG-----TYVRVFDLN-----PPGFS-HPNLEFLKGTI 98
Query: 64 TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIR 123
D ++VR K +N+A V ++ ++ L + G ++ + +
Sbjct: 99 LD-RNAVRQALSGIDKVFHNVAQ---VPLAKEKDLFWS--VNCGGTQIIVDESVATGIEK 152
Query: 124 FYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKL 158
F S+S +FG + P EET P YG AKL
Sbjct: 153 FVYTSSSAVFGAPKSNPVTEETEPNPAEDYGRAKL 187
>gi|1174963|sp|Q04973|VIPB_SALTI VI POLYSACCHARIDE BIOSYNTHESIS
PROTEIN VIPB/TVIC >gi|1361288|pir||C36892 Vi
polysaccharide biosynthetic protein vipB - Salmonella
typhi >gi|47961|emb|CAA47992| (X67785) wcdB; ORF3 in
citation [1] [Salmonella typhi] >gi|426446|dbj|BAA03193|
(D14156) WcdB protein [Salmonella typhi]
Length = 348
Score = 38.7 bits (88), Expect = 0.075
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 14/186 (7%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIA----QHPKLHLV 59
K +ITG+ G G+ L + LL + V G S+ ++++ + Q + +
Sbjct: 16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQH-NLDDVRTSVSEEQWSRFIFI 74
Query: 60 EYDL---TDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIR 116
+ D+ TD + + ++ V + AA V S P+ T G +N+L A R
Sbjct: 75 QGDIRKFTDCQKACKNVDY-----VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAAR 129
Query: 117 IVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAA 176
+ Y AS+S +G P+IEE P SPY + K + SY A
Sbjct: 130 DAHVSSFTYAASSST-YGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAI 188
Query: 177 SGILFN 182
FN
Sbjct: 189 GLRYFN 194
>gi|6090551|emb|CAB58730.1| (AL122032) putative cinnamoyl-coa
reductase [Schizosaccharomyces pombe]
Length = 336
Score = 38.7 bits (88), Expect = 0.075
Identities = 39/141 (27%), Positives = 61/141 (42%), Gaps = 5/141 (3%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE 60
M K ++TG+TG GA++A+ LL+ GY V GT R + + L K+ V
Sbjct: 1 MSGKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKAD--ELIRLNPGLKDKIEFV- 57
Query: 61 YDLTDLSSSVRLLELAAPKE-VYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVN 119
+ D+S+S + E + ++A+ FV D D G + +LEA + V
Sbjct: 58 -IVKDVSASNAFDGVLKDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVK 116
Query: 120 PKIRFYQASTSEMFGKVQQTP 140
R S+ G Q P
Sbjct: 117 SIKRIVITSSFAAVGNFQIDP 137
>gi|462155|sp|Q05026|GALE_NEIGO UDP-GLUCOSE 4-EPIMERASE
(GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE)
>gi|486715|pir||S34984 UDPglucose 4-epimerase (EC
5.1.3.2) - Neisseria gonorrhoeae
>gi|1051296|emb|CAA79721| (Z21508) UDP-glucose
4-epimerase [Neisseria gonorrhoeae]
Length = 338
Score = 36.0 bits (81), Expect = 0.49
Identities = 65/347 (18%), Positives = 135/347 (38%), Gaps = 50/347 (14%)
Query: 5 SAVITGITGQDGAYLAQLLLEMGY--VVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
+ +ITG TG G++ A L++ GY V+ SS+ R+ ++ P + D
Sbjct: 2 TVLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRLRQITGRNIP---FYQGD 58
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKI 122
+ D ++ + V + A VG S +P G++ L E + +
Sbjct: 59 IRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYGSLVLAEEMARAG-VL 117
Query: 123 RFYQASTSEMFGKVQQTPQIEE-TPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGILF 181
+ +S++ ++G ++ P E+ P +PYG +K M + +++ + S IL
Sbjct: 118 KIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPRW--SVILL 175
Query: 182 NHESPLRARDF---------VTRKITHAIAMIKLGKLDVLKLGNLD-------AKRDWGF 225
+ +P+ A + V + I + G+L L + D RD+
Sbjct: 176 RYFNPIGAHESGLIGEQPNGVPNNLLPYICQVASGRLPQLSVFGGDYPTPDGTGMRDYIH 235
Query: 226 AKEYVDGMWRMLQAD----EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECG 281
+ +G ++A F L + R +V + + +A + + ++
Sbjct: 236 VMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAFEAASGLHIPYR-------- 287
Query: 282 VDVASGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 328
I P+ R ++ +P+ + + GWE K L+++
Sbjct: 288 -----------IQPR--RAGDLACSYADPSHTKQQTGWETKRGLQQM 321
>gi|1765995 (U76617) UDP-glucose- 4-epimerase [Pasteurella
multocida]
Length = 338
Score = 34.8 bits (78), Expect = 1.1
Identities = 70/343 (20%), Positives = 131/343 (37%), Gaps = 46/343 (13%)
Query: 7 VITGITGQDGAYLAQLLLEMG--YVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDLT 64
++TG G G++ LL VV SS + R+ ++ Q + + D+
Sbjct: 4 LVTGGAGYIGSHTVVELLNANKDVVVLDNLCNSSPKSLERVAQITGKQ---VKFYQGDIL 60
Query: 65 DLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNPKIRF 124
D + ++ + V + A VG S +P G++ L++ ++ F
Sbjct: 61 DTALLQKIFAENQIQSVMHFAGLKAVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVW-NF 119
Query: 125 YQASTSEMFGKVQQTPQIEETPFY-PRSPYGIAKLYAHWMTVNYRESYGIFAASGI-LFN 182
+S++ ++G + P E +PYG +K + + ++ F+ + + FN
Sbjct: 120 VFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEFSITILRYFN 179
Query: 183 ----HESPLRARD--FVTRKITHAIAMIKLGKLDVLKLGNLDAK-------RDWGFAKEY 229
HES L D + + I+ + +GKL L + D + RD+ +
Sbjct: 180 PVGAHESGLIGEDPNGIPNNLLPYISQVAIGKLPQLSVFGSDYETHDGTGVRDYIHVVDL 239
Query: 230 VDGMWRMLQADEPDT----FVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVA 285
G + L E D + L T +V D V DI++ +K
Sbjct: 240 AIGQLKALDRHEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIPYK------------ 287
Query: 286 SGKTLVTINPKFYRPAEVDLLIGNPAKARTKLGWEPKTTLEEL 328
LV RP ++ +P+ A+T+L W LE++
Sbjct: 288 ----LVD-----RRPGDIATCYSDPSLAKTELNWTAARGLEQM 321
>gi|98916|pir||S18542 hypothetical protein 4 - Streptomyces
coelicolor >gi|46816|emb|CAA41640| (X58833) actVA 4
[Streptomyces coelicolor]
Length = 294
Score = 34.4 bits (77), Expect = 1.5
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
NK ++ G TG+ G A+ LLE G+ V R + + ELG + H D
Sbjct: 5 NKPVLVLGATGKQGGSAARYLLERGWTVRAFVRDPGAPKAKELRELGASLHTG------D 58
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITG 105
L D + SVR AA K Y + S P+T + G
Sbjct: 59 LED-AGSVR----AAMKGAYGV-------FSIQTPMTPAGVEG 89
>gi|2058311|emb|CAA56103| (X79566) cinnamoyl-CoA reductase
[Eucalyptus gunnii]
Length = 336
Score = 33.6 bits (75), Expect = 2.5
Identities = 22/65 (33%), Positives = 32/65 (48%), Gaps = 1/65 (1%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
++ +TG G +++ +LLLE GY V GT R + EL A +L L + DL
Sbjct: 11 QTVCVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDPKNGHLRELEGASE-RLTLYKGDL 69
Query: 64 TDLSS 68
D S
Sbjct: 70 MDYGS 74
>gi|2058313|emb|CAA66063| (X97433) cinnamoyl-CoA reductase
[Eucalyptus gunnii]
Length = 317
Score = 33.6 bits (75), Expect = 2.5
Identities = 22/65 (33%), Positives = 32/65 (48%), Gaps = 1/65 (1%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
++ +TG G +++ +LLLE GY V GT R + EL A +L L + DL
Sbjct: 11 QTVCVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDPKNGHLRELEGASE-RLTLYKGDL 69
Query: 64 TDLSS 68
D S
Sbjct: 70 MDYGS 74
>gi|2239260|emb|CAA74071| (Y13734) cinnamoyl CoA reductase [Zea
mays]
Length = 371
Score = 33.6 bits (75), Expect = 2.5
Identities = 23/72 (31%), Positives = 36/72 (49%), Gaps = 3/72 (4%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL-GIAQHPKLHLVEYD 62
++ +TG G ++L +LLLE GY V GT R + L G A+ +L L + D
Sbjct: 29 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAE--RLILCKAD 86
Query: 63 LTDLSSSVRLLE 74
L D + R ++
Sbjct: 87 LLDYDAICRAVQ 98
>gi|3242328|emb|CAA66707| (X98083) cinnamoyl-CoA reductase [Zea
mays]
Length = 371
Score = 33.6 bits (75), Expect = 2.5
Identities = 23/72 (31%), Positives = 36/72 (49%), Gaps = 3/72 (4%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL-GIAQHPKLHLVEYD 62
++ +TG G ++L +LLLE GY V GT R + L G A+ +L L + D
Sbjct: 29 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLRALDGAAE--RLILCKAD 86
Query: 63 LTDLSSSVRLLE 74
L D + R ++
Sbjct: 87 LLDYDAICRAVQ 98
>gi|3341511|emb|CAA13176.1| (AJ231134) cinnamoyl-CoA reductase
[Saccharum officinarum]
Length = 372
Score = 33.6 bits (75), Expect = 2.5
Identities = 23/72 (31%), Positives = 36/72 (49%), Gaps = 3/72 (4%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINEL-GIAQHPKLHLVEYD 62
++ +TG G ++L +LLLE GY V GT R + L G A+ +L L + D
Sbjct: 29 QTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAE--RLILCKAD 86
Query: 63 LTDLSSSVRLLE 74
L D + R ++
Sbjct: 87 LLDYDAICRAVQ 98
>gi|4490303|emb|CAB38794.1| (AL035678) putative protein [Arabidopsis
thaliana]
Length = 344
Score = 33.6 bits (75), Expect = 2.5
Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 24/171 (14%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYD 62
N ++TG TG GA L +LL G+ V RR+S L+ P++ L D
Sbjct: 12 NMKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLS---------DLPPEVELAYGD 62
Query: 63 LTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI------- 115
+TD S L + + ++ AA + V P + G N+LEA+
Sbjct: 63 VTDYRS---LTDACSGCDIVFHAA-ALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQ 118
Query: 116 RIVNPKIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVN 166
+I+ F ST G V Q+ F+ + Y +K A M +N
Sbjct: 119 KIIYTSSFFALGSTD---GSVANENQVHNERFF-CTEYERSKAVADKMALN 165
>gi|2127363|pir||I40869 ORF4 - Clostridium perfringens (fragment)
>gi|853810|emb|CAA60799| (X87369) ORF4 [Clostridium
perfringens]
Length = 190
Score = 33.2 bits (74), Expect = 3.3
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLN-----FWRINELGIAQHPK 55
M K +ITG + G A+LLLE G++VY T RR ++ +I L +
Sbjct: 1 MNKKVILITGASSGIGYSTAKLLLEEGHIVYCTARRVENMRELQRLGGKIIFLDVKDERA 60
Query: 56 LHLVEYDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAI 115
+ V + + S + ++ Y A + V+ D D+ G +++A+
Sbjct: 61 VQKVVNTIIRMESRI---DVVFANSXY-ACAGALETVNIDDAKEEFDVNLFGVARVIKAV 116
Query: 116 RIVNPKIRF-YQASTSEMFGKVQQTPQIEETPFYPRSPYGI 155
K ++ Y TS + G + TP + FYP S + +
Sbjct: 117 MPQMRKQKYGYIIVTSSLVG-IVSTPMMS---FYPASKHAL 153
>gi|5924379|gb|AAD56579.1|AF184272_1 (AF184272) dihydroflavonol
4-reductase like [Daucus carota]
Length = 332
Score = 32.8 bits (73), Expect = 4.3
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 3 NKSAVITGITGQDGAYLAQLLLEMGYVVYGTYR 35
NK+ +TG +G G++L + LLE GY V T R
Sbjct: 2 NKTVCVTGASGYIGSWLVKTLLERGYHVRATVR 34
>gi|6503293|gb|AAF14669.1|AC011713_17 (AC011713) Similar to
gb|X98083 cinnamoyl-CoA reductase from Zea mays. ESTs
gb|Z24528 and gb|AI996461 come from this gene.
[Arabidopsis thaliana]
Length = 332
Score = 32.8 bits (73), Expect = 4.3
Identities = 22/62 (35%), Positives = 31/62 (49%), Gaps = 1/62 (1%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
K +TG G +++ +LLLE GY V GT R + + EL A+ +L L DL
Sbjct: 6 KLVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKE-RLTLHSADL 64
Query: 64 TD 65
D
Sbjct: 65 LD 66
>gi|6587801|gb|AAF18492.1|AC010924_5 (AC010924) Strong similarity
to cinnamoyl CoA reductase gi|2960364 from Populus
balsamifera. ESTs gb|N95902, gb|AI992693, gb|AI995837
come from this gene. [Arabidopsis thaliana]
Length = 344
Score = 32.8 bits (73), Expect = 4.3
Identities = 20/62 (32%), Positives = 31/62 (49%), Gaps = 1/62 (1%)
Query: 4 KSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVEYDL 63
K+ +TG G +++ ++LLE GY V GT R + EL + +L L + DL
Sbjct: 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKE-RLILCKADL 69
Query: 64 TD 65
D
Sbjct: 70 QD 71
>gi|100395|pir||S07463 dihydroflavonol-4-reductase (EC 1.-.-.-) -
garden petunia >gi|20544|emb|CAA33544| (X15537)
dihydroflavonol-4-reductase protein (AA 1-373) [Petunia
x hybrida]
Length = 373
Score = 31.7 bits (70), Expect = 9.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 2 CNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYR 35
C+ + +TG G G++L LLE GY V+ T R
Sbjct: 7 CSATVCVTGAAGFIGSWLVMRLLERGYNVHATVR 40
>gi|1175764|sp|P45200|YDFG_HAEIN HYPOTHETICAL OXIDOREDUCTASE
HI1430 >gi|1075305|pir||H64122 short chain alcohol
dehydrogenase homolog - Haemophilus influenzae (strain
Rd KW20) >gi|1574268 (U32822) short chain
dehydrogenase/reductase [Haemophilus influenzae Rd]
Length = 252
Score = 31.7 bits (70), Expect = 9.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 MCNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSL 40
M +A++TG T G + + L+E GY V GT RR+ L
Sbjct: 1 MKTTTALVTGATAGFGLAICKKLIEAGYKVIGTGRRADRL 40
Database: nr
Posted date: Jan 29, 2000 11:59 PM
Number of letters in database: 138,416,789
Number of sequences in database: 449,381
Lambda K H
0.320 0.136 0.403
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89387459
Number of Sequences: 449381
Number of extensions: 3519778
Number of successful extensions: 7846
Number of sequences better than 10.0: 286
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 7408
Number of HSP's gapped (non-prelim): 334
length of query: 346
length of database: 138,416,789
effective HSP length: 55
effective length of query: 291
effective length of database: 113,700,834
effective search space: 33086942694
effective search space used: 33086942694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 70 (31.7 bits)