BLASTP 2.0.10 [Aug-26-1999]
Query= XF-00P00-GL61
(100 letters)
Database: nr
457,798 sequences; 140,871,481 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|4063812|dbj|BAA36266.1| (AB008550) orf38 [Pseudomonas aerugi... 36 0.067
gi|1175363|sp|P44094|YA14_HAEIN HYPOTHETICAL PROTEIN HI1014 >gi... 34 0.45
gi|1899262 (U91858) v-bcl-2 [Murine herpesvirus 68] >gi|2317965... 30 5.1
>gi|4063812|dbj|BAA36266.1| (AB008550) orf38 [Pseudomonas
aeruginosa phage phi CTX]
Length = 117
Score = 36.4 bits (82), Expect = 0.067
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 14 ALERLILIAKNDTNQSRHVANFLLAWWNADSCGGFNLTALWGLDEAI 60
AL+RL+ IA+ D+ QS + FLL +N + F+LT L GLD A+
Sbjct: 29 ALKRLLPIAQRDSGQSGVIGRFLLGLYNGQA-HRFDLTELRGLDPAL 74
>gi|1175363|sp|P44094|YA14_HAEIN HYPOTHETICAL PROTEIN HI1014
>gi|1074605|pir||D64018 hypothetical protein HI1014 -
Haemophilus influenzae (strain Rd KW20) >gi|1574046
(U32782) conserved hypothetical protein [Haemophilus
influenzae Rd]
Length = 315
Score = 33.6 bits (75), Expect = 0.45
Identities = 21/48 (43%), Positives = 26/48 (53%), Gaps = 3/48 (6%)
Query: 45 CGGFNLTALWGLDEAITVDMTAVFTLVAGVSKYPD---SLGYEEDFKA 89
C NL GLDE IT + A+F L A VS + + LGYE +F A
Sbjct: 50 CYEMNLRYPTGLDELITEETDAIFHLAAIVSSHAEQDPDLGYETNFLA 97
>gi|1899262 (U91858) v-bcl-2 [Murine herpesvirus 68] >gi|2317965
(U97553) bcl-2 homolog (gene 16?) [murine herpesvirus
68] >gi|6625635|gb|AAF19336.1|AF105037_68 (AF105037)
M11 [murid herpesvirus 4]
Length = 171
Score = 30.1 bits (66), Expect = 5.1
Identities = 13/44 (29%), Positives = 26/44 (58%), Gaps = 1/44 (2%)
Query: 56 LDEAITVDMTAVFTLVAGVSKYPDSLGYEEDFKAILRQWRPELA 99
+D A+ VD++ + TL ++ DS+ Y D+ L+ W+ +L+
Sbjct: 30 VDSAVLVDVSKIITLTQEFRRHYDSV-YRADYGPALKNWKRDLS 72
Database: nr
Posted date: Feb 20, 2000 12:20 AM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.320 0.132 0.410
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27180572
Number of Sequences: 457798
Number of extensions: 922131
Number of successful extensions: 1800
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1800
Number of HSP's gapped (non-prelim): 3
length of query: 100
length of database: 140,871,481
effective HSP length: 50
effective length of query: 50
effective length of database: 117,981,581
effective search space: 5899079050
effective search space used: 5899079050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)