BLASTP 2.0.10 [Aug-26-1999]
Query= XF-C13KB-GL09
(102 letters)
Database: nr
457,798 sequences; 140,871,481 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|3892703|emb|CAA22153.1| (AL033545) putative glycine-rich pro... 44 4e-04
gi|1176754|sp|P45931|YQBO_BACSU HYPOTHETICAL 171.0 KD PROTEIN I... 43 6e-04
gi|3892705|emb|CAA22155.1| (AL033545) putative protein [Arabido... 43 0.001
gi|2772914 (AF029249) precollagen D [Mytilus edulis] 41 0.004
gi|121627|sp|P09789|GRP1_PETHY GLYCINE-RICH CELL WALL STRUCTURA... 39 0.008
gi|4972048|emb|CAB43916.1| (AL078470) glycine-rich protein like... 39 0.014
gi|2494114 (AC002376) Contains similarity to Daucus glycine-ric... 39 0.014
gi|3875801|emb|CAB02926.1| (Z81059) F11F1.4 [Caenorhabditis ele... 38 0.019
gi|121640|sp|P27483|GRP_ARATH GLYCINE-RICH CELL WALL STRUCTURAL... 38 0.019
gi|3875808|emb|CAB07573.1| (Z93377) cDNA EST EMBL:C11010 comes ... 38 0.019
gi|4504915|ref|NP_002266.1|| keratin 15 >gi|125081|sp|P19012|K1... 38 0.025
gi|3550539|emb|CAA06944| (AJ006277) K15 intermediate filament t... 38 0.025
gi|6706437|emb|CAB66004.1| (AJ271041) Gly-rich protein [Drosoph... 38 0.025
gi|1722872|sp|P54334|XKDO_BACSU PHAGE-LIKE ELEMENT PBSX PROTEIN... 38 0.025
gi|3875800|emb|CAB02925.1| (Z81059) cDNA EST yk422f1.5 comes fr... 38 0.033
gi|81623|pir||JQ1060 glycine-rich protein 1 - Arabidopsis thali... 38 0.033
gi|2909467|emb|CAA17353| (AL021930) PE_PGRS [Mycobacterium tube... 37 0.043
gi|3875802|emb|CAB02927.1| (Z81059) F11F1.5 [Caenorhabditis ele... 37 0.043
gi|4557697|ref|NP_000412.1|| keratin 10 >gi|88041|pir||A31994 k... 37 0.056
gi|3880303|emb|CAA90992.1| (Z54238) T28C6.1 [Caenorhabditis ele... 37 0.056
gi|125074|sp|P06394|K1CJ_BOVIN KERATIN, TYPE I CYTOSKELETAL VIB... 37 0.056
gi|2388676 (AF015539) precollagen P [Mytilus edulis] 37 0.056
gi|1469223|emb|CAA99171| (Z74892) glycine-rich protein [Brassic... 37 0.056
gi|1255113|gb|AAC56432.1| (U50550) glycoprotein B [rat cytomega... 37 0.056
gi|71528|pir||KRHU0 keratin 10, type I, cytoskeletal (clone lam... 36 0.073
gi|547749|sp|P13645|K1CJ_HUMAN KERATIN, TYPE I CYTOSKELETAL 10 ... 36 0.073
gi|3513512 (AF043944) nongradient byssal precursor [Mytilus edu... 36 0.073
gi|2738441 (AF003534) hypothetical protein 084L [Chilo iridesce... 36 0.073
gi|6041851|gb|AAF02160.1|AC009853_20 (AC009853) unknown protein... 36 0.096
gi|2914704|gb|AAC04494.1| (AC003974) unknown protein [Arabidops... 36 0.13
gi|3892586|emb|CAA28996| (X05421) keratin type II [Homo sapiens] 36 0.13
gi|421936|pir||S34666 glycine-rich protein - common tobacco >gi... 36 0.13
gi|125098|sp|P12035|K2C3_HUMAN KERATIN, TYPE II CYTOSKELETAL 3 ... 36 0.13
gi|2496543|sp|Q50615|YI18_MYCTU HYPOTHETICAL PE-PGRS FAMILY PRO... 36 0.13
gi|88053|pir||A29666 keratin, 65K type II cytoskeletal - human 36 0.13
gi|211743 (M18633) elastin [Gallus gallus] 36 0.13
gi|2204081|dbj|BAA20466| (D86074) insoluble protein [Pinctada f... 36 0.13
gi|6679637|ref|NP_031951.1|| elastin >gi|1706636|sp|P54320|ELS_... 35 0.16
gi|71527|pir||KRMSE1 keratin, 59K type I cytoskeletal - mouse 35 0.16
gi|119110|sp|P03211|EBN1_EBV EBNA-1 NUCLEAR PROTEIN >gi|73987|p... 35 0.16
gi|3877954|emb|CAB04518.1| (Z81555) similar to ATP-dependent he... 35 0.16
gi|125069|sp|P02535|K1CJ_MOUSE KERATIN, TYPE I CYTOSKELETAL 10 ... 35 0.16
gi|6680602|ref|NP_032495.1|| keratin complex 1, acidic, gene 15... 35 0.22
gi|1079080|pir||S49195 GCR 20 protein - fruit fly (Drosophila m... 35 0.22
gi|115613|sp|P04574|CANS_PIG CALCIUM-DEPENDENT PROTEASE, SMALL ... 35 0.22
gi|288246|emb|CAA37407.1| (X53320) keratin K13 [Mus musculus] 35 0.22
gi|741022|prf||2006282A keratin 15 [Mus musculus] 35 0.22
gi|6754480|ref|NP_034792.1|| keratin complex 1, acidic, gene 13... 35 0.22
gi|125099|sp|P04265|K2C2_XENLA KERATIN, TYPE II CYTOSKELETAL I ... 35 0.22
gi|544426|sp|Q03878|GRP_DAUCA GLYCINE-RICH RNA-BINDING PROTEIN ... 35 0.22
gi|1362077|pir||S57483 glycin-rich protein - cowpea (fragment) ... 35 0.22
gi|2113981|emb|CAB08933| (Z95557) PE_PGRS [Mycobacterium tuberc... 35 0.22
gi|4502565|ref|NP_001740.1|| calpain, small polypeptide >gi|115... 35 0.22
gi|4469001|emb|CAB10478.2| (Z97342) hypothetical protein [Arabi... 35 0.22
gi|4504911|ref|NP_002265.1|| keratin 13 >gi|280816|pir||A37343 ... 34 0.28
gi|81627|pir||JQ1064 glycine-rich protein 5 - Arabidopsis thali... 34 0.28
gi|6678645|ref|NP_032501.1|| keratin complex 2, basic, gene 4 >... 34 0.28
gi|1658179 (U74325) glycine-rich protein [Nicotiana tabacum] 34 0.28
gi|1945663|emb|CAB08033| (Z94043) hypothetical protein [Bacillu... 34 0.28
gi|2924451|emb|CAA17751| (AL022022) PE_PGRS [Mycobacterium tube... 34 0.28
gi|6016411|sp|P13646|K1CM_HUMAN KERATIN, TYPE I CYTOSKELETAL 13... 34 0.28
gi|3775995|emb|CAA09200| (AJ010461) RNA helicase [Arabidopsis t... 34 0.37
gi|2739483 (AF026845) abductin [Argopecten irradians] 34 0.37
gi|4557705|ref|NP_000217.1|| keratin 9 >gi|547748|sp|P35527|K1C... 34 0.37
gi|1082558|pir||S41161 keratin 9, cytoskeletal - human >gi|4354... 34 0.37
gi|125097|sp|P04266|K2C1_XENLA KERATIN, TYPE II CYTOSKELETAL I ... 34 0.37
gi|775215 (U23857) EBNA1 [Herpesvirus papio] 34 0.37
gi|79314|pir||B28543 PAL cross-reacting lipoprotein precursor -... 34 0.48
gi|115614|sp|P06813|CANS_RABIT CALCIUM-DEPENDENT PROTEASE, SMAL... 34 0.48
gi|322647|pir||S31415 glycine-rich protein GRP22 - rape >gi|178... 34 0.48
gi|71526|pir||KRHU3 keratin 13, type I, cytoskeletal, long form... 34 0.48
gi|88054|pir||A22940 keratin, 67K type II cytoskeletal - human 34 0.48
gi|6457875|gb|AAF09792.1|AE001882_10 (AE001882) hypothetical pr... 34 0.48
gi|1172046|sp|P10325|PCP_HAEIN OUTER MEMBRANE LIPOPROTEIN PCP P... 34 0.48
gi|1946988 (AF000193) T20B6.3 gene product [Caenorhabditis eleg... 34 0.48
gi|2916891|emb|CAA17639.1| (AL022004) PE_PGRS [Mycobacterium tu... 34 0.48
gi|121742|sp|P09851|GTPA_BOVIN GTPASE-ACTIVATING PROTEIN (GAP) ... 33 0.63
gi|476947|pir||A47369 RNA-binding protein (alternatively splice... 33 0.63
gi|212742 (M21880) tropoelastin [Gallus gallus] 33 0.63
gi|119296|sp|P07916|ELS_CHICK ELASTIN PRECURSOR (TROPOELASTIN) ... 33 0.63
gi|226139|prf||1411306A GTPase activating protein GAP [Bos taurus] 33 0.63
gi|2119175|pir||A26601 elastin precursor - chicken (fragment) 33 0.63
gi|2896724|emb|CAA17203.1| (AL021897) PE_PGRS [Mycobacterium tu... 33 0.63
gi|2916892|emb|CAA17640.1| (AL022004) PE_PGRS [Mycobacterium tu... 33 0.63
gi|283665|pir||C41732 heterogeneous nuclear RNP protein clone p... 33 0.63
gi|3201493|emb|CAA11445| (AJ223578) intermediate filament prote... 33 0.63
gi|5901830|gb|AAD55423.1|AF181637_1 (AF181637) BcDNA.GH07910 [D... 33 0.63
gi|477707|pir||B47369 RNA-binding protein (alternatively splice... 33 0.83
gi|465761|sp|P34306|YKQA_CAEEL HYPOTHETICAL 38.5 KD PROTEIN C06... 33 0.83
gi|1706637|sp|Q99372|ELS_RAT ELASTIN PRECURSOR (TROPOELASTIN) >... 33 0.83
gi|121631|sp|P27484|GRP2_NICSY GLYCINE-RICH CELL WALL STRUCTURA... 33 0.83
gi|207462 (M86376) tropoelastin [Rattus norvegicus] 33 0.83
gi|110610|pir||S07330 keratin, epidermal - mouse >gi|52787|emb|... 33 0.83
gi|223657|prf||0905238A keratin subunit,epidermal [Mus musculus] 33 0.83
gi|1351109|sp|Q08473|SQD_DROME RNA-BINDING PROTEIN SQUID (HETER... 33 0.83
gi|4557699|ref|NP_000214.1|| keratin 12 >gi|2497269|sp|Q99456|K... 33 0.83
gi|2661667|emb|CAA15773| (AL009198) PE_PGRS [Mycobacterium tube... 33 0.83
gi|2791527|emb|CAA16064| (AL021246) PE_PGRS [Mycobacterium tube... 33 0.83
gi|2911021|emb|CAA17514| (AL021958) PE_PGRS [Mycobacterium tube... 33 0.83
gi|3282276 (AF009630) l16 [bacteriophage bIL170] 33 0.83
gi|6678643|ref|NP_032499.1|| keratin complex 2, basic, gene 1 >... 33 0.83
gi|283666|pir||B41732 heterogeneous nuclear RNP protein clone p... 33 0.83
gi|4206086|gb|AAD11416.1| (AF084571) keratin 17 [Canis familiaris] 33 0.83
gi|4678224|gb|AAD26969.1|AC007135_6 (AC007135) unknown protein ... 33 0.83
gi|6437557|gb|AAF08584.1|AC011623_17 (AC011623) putative RNA he... 33 0.83
gi|5174491|ref|NP_006112.1|| keratin 1 (epidermolytic hyperkera... 32 1.1
gi|2496502|sp|Q50630|YP91_MYCTU HYPOTHETICAL PE-PGRS FAMILY PRO... 32 1.1
gi|2911020|emb|CAA17513| (AL021958) PE_PGRS [Mycobacterium tube... 32 1.1
gi|3877532|emb|CAB01210.1| (Z77663) predicted using Genefinder;... 32 1.1
gi|6434581|emb|CAB60949.1| (AL132898) predicted using Genefinde... 32 1.1
gi|6434583|emb|CAB60951.1| (AL132898) predicted using Genefinde... 32 1.1
gi|121644|sp|P17816|GRP_HORVU GLYCINE-RICH CELL WALL STRUCTURAL... 32 1.4
gi|88047|pir||A24843 keratin, 46K type I cytoskeletal - human 32 1.4
gi|1363944|pir||JC4313 type I keratin 16 - human >gi|1195531|bb... 32 1.4
gi|1769895|emb|CAA65416| (X96598) CaLB protein [Arabidopsis tha... 32 1.4
gi|1916930 (U88570) CREB-binding protein homolog [Drosophila me... 32 1.4
gi|2739487 (AF026847) abductin [Argopecten irradians] 32 1.4
gi|5031837|ref|NP_005548.1|| keratin 16 (focal non-epidermolyti... 32 1.4
gi|4091879 (AF061812) keratin 16 [Homo sapiens] >gi|4321795|gb|... 32 1.4
gi|5081699|gb|AAD39495.1|AF145799_1 (AF145799) immunogenic 23 k... 32 1.4
gi|125100|sp|P04261|K2C3_BOVIN KERATIN, TYPE II CYTOSKELETAL 60... 32 1.9
gi|2498469|sp|Q47279|HRPN_ERWCA HARPIN (HARPIN-ECC) >gi|1381104... 32 1.9
gi|2829589|sp|P71933|YQ34_MYCTU HYPOTHETICAL PE-PGRS FAMILY PRO... 32 1.9
gi|2131027|emb|CAB09322| (Z95890) PE_PGRS(wag22) [Mycobacterium... 32 1.9
gi|3257613|dbj|BAA30296| (AP000005) 743aa long hypothetical pro... 32 1.9
gi|5917781|gb|AAD56037.1|AF182396_1 (AF182396) ammonium transpo... 32 1.9
gi|4512332|dbj|BAA75244.1| (AB023657) tetracycline-resistance p... 31 2.4
gi|631604|pir||S42629 keratin K3 - rabbit >gi|425551|bbs|137969... 31 2.4
gi|113011|sp|P26967|AC20_TENMO ADULT-SPECIFIC CUTICULAR PROTEIN... 31 2.4
gi|71536|pir||KRHU2 keratin, 67K type II cytoskeletal - human (... 31 2.4
gi|135549|sp|P02981|TCR3_ECOLI TETRACYCLINE RESISTANCE PROTEIN,... 31 2.4
gi|207852 (M20189) tet protein [artificial sequence] 31 2.4
gi|984918 (U35134) tetracycline resistance protein [Cloning vec... 31 2.4
gi|1236519 (U46855) tetracycline resistance protein [Cloning ve... 31 2.4
gi|2181966|emb|CAB09452| (Z96071) PE_PGRS [Mycobacterium tuberc... 31 2.4
gi|2314487|gb|AAD08364.1| (AE000633) H. pylori predicted coding... 31 2.4
gi|2352260 (AF000949) keratin [Canis familiaris] 31 2.4
gi|4557725|ref|NP_000418.1|| loricrin >gi|126389|sp|P23490|LORI... 31 2.4
gi|2661628|emb|CAA15735| (AL009198) PPE [Mycobacterium tubercul... 31 2.4
gi|3077806|dbj|BAA25794| (AB013076) loricrin [Homo sapiens] 31 2.4
gi|3378364 (AF079317) sex pilus assembly and mating pair stabil... 31 2.4
gi|4155836 (AE001547) putative [Helicobacter pylori J99] 31 2.4
gi|401789 (L24206) ipiB1 [Phytophthora infestans] >gi|741003|pr... 31 3.2
gi|3915091|sp|Q90502|TBFG_EPTST THREAD BIOPOLYMER FILAMENT GAMM... 31 3.2
gi|1655664|emb|CAB03730| (Z81368) PE_PGRS [Mycobacterium tuberc... 31 3.2
gi|2497721|sp|P55741|SLYB_ECOLI OUTER MEMBRANE LIPOPROTEIN SLYB... 31 3.2
gi|1787929 (AE000259) putative outer membrane protein [Escheric... 31 3.2
gi|2661646|emb|CAA15752| (AL009198) PE_PGRS [Mycobacterium tube... 31 3.2
gi|2769728 (U92288) HN1 [Human herpesvirus 6] 31 3.2
gi|397687 (L23937) ipiB2 [Phytophthora infestans] >gi|741004|pr... 31 3.2
gi|6647752|sp|O88569|ROA2_MOUSE HETEROGENEOUS NUCLEAR RIBONUCLE... 31 3.2
gi|1079079|pir||S49194 GCR 17 protein - fruit fly (Drosophila m... 31 4.2
gi|397689 (L23936) ipiB3 [Phytophthora infestans] >gi|741005|pr... 31 4.2
gi|6324321|ref|NP_014391.1|SIS1| sit4 suppressor, dnaJ homolog;... 31 4.2
gi|4504447|ref|NP_002128.1|| heterogeneous nuclear ribonucleopr... 31 4.2
gi|133257|sp|P22626|ROA2_HUMAN HETEROGENEOUS NUCLEAR RIBONUCLEO... 31 4.2
gi|2498986|sp|P76011|TAG1_ECOLI TRANSGLYCOSYLASE ASSOCIATED PRO... 31 4.2
gi|3130032|emb|CAA19010| (AL023534) major facilitator family tr... 31 4.2
gi|3876841|emb|CAA98477.1| (Z74033) similar to PH (pleckstrin ... 31 4.2
gi|5381308|gb|AAD42935.1|AF084543_3 (AF084543) glycoprotein B [... 31 4.2
gi|5725166|dbj|BAA83164.1| (AB030825) PRF20; putative tail leng... 31 4.2
gi|5734621|dbj|BAA83352.1| (AP000391) ESTs AU067992(C11433),AU0... 31 4.2
gi|6273351|gb|AAF06330.1|AF192348_1 (AF192348) vitamin D respon... 31 4.2
gi|6939231|gb|AAF31733.1|AC020579_10 (AC020579) putative RNA-bi... 31 4.2
gi|2497722|sp|Q53549|SLYB_SALTY OUTER MEMBRANE LIPOPROTEIN SLYB... 30 5.5
gi|2094820|emb|CAB08573| (Z95324) hypothetical protein Rv0341 [... 30 5.5
gi|2193918|emb|CAB09596| (Z96800) PE_PGRS [Mycobacterium tuberc... 30 5.5
gi|2315214|emb|CAA74748| (Y14390) Kv2 voltage-gated potassium c... 30 5.5
gi|2924444|emb|CAA17744| (AL022022) PE_PGRS [Mycobacterium tube... 30 5.5
gi|2924484|emb|CAA17724| (AL022021) PE_PGRS [Mycobacterium tube... 30 5.5
gi|3875569|emb|CAA92658.1| (Z68314) predicted using Genefinder ... 30 5.5
gi|5104335|dbj|BAA79650.1| (AP000060) 320aa long hypothetical p... 30 5.5
gi|5901697|gb|AAD55378.1|AF149712_6 (AF149712) TPP-dependent br... 30 5.5
gi|929566|emb|CAA28903| (X05285) fibrillarin [Drosophila melano... 30 5.5
gi|6760385|gb|AAF28325.1|AF204952_3 (AF204952) vp74 [Ectocarpus... 30 5.5
gi|116071|sp|P22522|CEAV_ECOLI COLICIN V PRECURSOR (MICROCIN V ... 30 7.2
gi|125068|sp|P02537|K1C0_XENLA KERATIN 3, TYPE I CYTOSKELETAL 5... 30 7.2
gi|2916941|emb|CAA17579| (AL021999) PE_PGRS [Mycobacterium tube... 30 7.2
gi|3868804|dbj|BAA34229| (AB013608) cytokeratin 17 [Mus musculus] 30 7.2
gi|4262573|gb|AAD14701| (AF125952) contains similarity to monoc... 30 7.2
gi|4803739|dbj|BAA77512.1| (AB026847) cold-inducible RNA-bindin... 30 7.2
gi|480017|pir||S36123 phosphotransferase system enzyme II (EC 2... 29 9.4
gi|113012|sp|P26968|AC22_TENMO ADULT-SPECIFIC CUTICULAR PROTEIN... 29 9.4
gi|100211|pir||S14984 glycine-rich protein (clone uA-3) - tomat... 29 9.4
gi|119856|sp|P22232|FBRL_XENLA FIBRILLARIN >gi|2134062|pir||I51... 29 9.4
gi|1709913|sp|P32059|PTYC_ECOLI PTS SYSTEM, MANNITOL (CRYPTIC)-... 29 9.4
gi|1263283 (U47853) fibroin-1 [Araneus diadematus] >gi|1589021|... 29 9.4
gi|1710627|sp|P51991|ROA3_HUMAN HETEROGENEOUS NUCLEAR RIBONUCLE... 29 9.4
gi|2392838 (AF011378) unknown [Bacteriophage sk1] 29 9.4
gi|345440|pir||S32224 acp-22 protein - yellow mealworm >gi|2884... 29 9.4
gi|4510397|gb|AAD21484.1| (AC006587) putative seed storage prot... 29 9.4
gi|5901828|gb|AAD55422.1|AF181636_1 (AF181636) BcDNA.GH07269 [D... 29 9.4
>gi|3892703|emb|CAA22153.1| (AL033545) putative glycine-rich protein
[Arabidopsis thaliana]
Length = 608
Score = 43.8 bits (101), Expect = 4e-04
Identities = 28/78 (35%), Positives = 41/78 (51%), Gaps = 4/78 (5%)
Query: 9 MNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGV-GMVYGG 65
+ VSGG + +V GVS G + GG GG GG+ G G + G+ G V+GG
Sbjct: 444 VGEVSGGVFG-EVSGGVVGGVSGGVVGGVSGGVFGGVPGGVFGGISGGVFGGLSGGVFGG 502
Query: 66 IVGGIGGLIAGFVLDKNV 83
+ GG+ G ++G V +V
Sbjct: 503 VSGGVVGGVSGGVFGGSV 520
Score = 42.6 bits (98), Expect = 0.001
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 21 IEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGV-GMVYGGIVGGIGGLIAGF 77
+ + GVS G + GG GG GG++G G + GV G V+GG+ GG+ G ++G
Sbjct: 287 VPGGVFGGVSGGVFGGLCGGVFGGVSGGVIGGVSGGVVGGVSGGVFGGVPGGVFGSVSGG 346
Query: 78 V---LDKNVTYNYAVGFYNSLFNGTF 100
V + V + G + L G F
Sbjct: 347 VFGGVPGGVFGGVSGGVFGGLCGGVF 372
Score = 42.2 bits (97), Expect = 0.001
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 9 MNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG------VGSIAQGV-GM 61
+ VSGG + + + GV GS+ GG GG GG+ G G + GV G
Sbjct: 316 IGGVSGG-VVGGVSGGVFGGVPGGVFGSVSGGVFGGVPGGVFGGVSGGVFGGLCGGVFGG 374
Query: 62 VYGGIVGGIGGLIAGFVLDKNVTYNYAVGFYNSLFNGTF 100
V GG++GG+ G + G V V G + S+ G F
Sbjct: 375 VSGGVIGGVSGGVVGGV-SGGVFGGVPGGVFGSVSGGVF 412
Score = 42.2 bits (97), Expect = 0.001
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGV-GMVYGGIVG 68
V GGD +V G + G ++GGT GG GG+ G G + GV G V+GG VG
Sbjct: 105 VGGGD------GGVVGGRTGGVTGGVFGGTVGGVCGGVFGGVSGGVFGGVCGGVFGGSVG 158
Query: 69 GI-GGLIAGFV 78
GI GG+ G V
Sbjct: 159 GICGGVFGGSV 169
Score = 41.8 bits (96), Expect = 0.002
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGV-GMVYGGIVG 68
VSGG + + +V GVS G + GG G GG+ G G + GV G V+GG+ G
Sbjct: 375 VSGGVIGG-VSGGVVGGVSGGVFGGVPGGVFGSVSGGVFGGVPGGVFGGVSGGVFGGLCG 433
Query: 69 GIGGLIAGFVL 79
G+ G I+G V+
Sbjct: 434 GVFGGISGGVV 444
Score = 41.4 bits (95), Expect = 0.002
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 3 ELTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGV- 59
E++ + VSGG + + + GV G I GG GG GG+ G G + GV
Sbjct: 454 EVSGGVVGGVSGG-VVGGVSGGVFGGVPGGVFGGISGGVFGGLSGGVFGGVSGGVVGGVS 512
Query: 60 GMVYGGIVGGI-GGLIAG 76
G V+GG VGG+ GG++ G
Sbjct: 513 GGVFGGSVGGVCGGVLGG 530
Score = 41.4 bits (95), Expect = 0.002
Identities = 30/93 (32%), Positives = 42/93 (44%), Gaps = 9/93 (9%)
Query: 15 GDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG------VGSIAQGV-GMVYGGIV 67
GD + + VS G + GG GG GG+ G VG ++ GV G V GG+V
Sbjct: 218 GDWFGGVPGGVFGSVSGGVFGGVSGGVSGGLCGGVFGGVSGCVVGGVSGGVFGGVSGGVV 277
Query: 68 GGIGGLIAGFVLDKNVTYNYAVGFYNSLFNGTF 100
GG+ G+ G + V + G + L G F
Sbjct: 278 GGVFGVFGG--VPGGVFGGVSGGVFGGLCGGVF 308
Score = 41.4 bits (95), Expect = 0.002
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 3 ELTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG------VGSIA 56
E++ VSGG + + +V GVS G + GG GG GG+ G G ++
Sbjct: 446 EVSGGVFGEVSGG-VVGGVSGGVVGGVSGGVFGGVPGGVFGGISGGVFGGLSGGVFGGVS 504
Query: 57 QGV-GMVYGGIVGGIGGLIAGFVL 79
GV G V GG+ GG G + G VL
Sbjct: 505 GGVVGGVSGGVFGGSVGGVCGGVL 528
Score = 41.0 bits (94), Expect = 0.003
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 9 MNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG---VGSIAQGVGMVYGG 65
+ VSGG + + G+S G + GG GG GG++G G VG V GG
Sbjct: 468 VGGVSGGVFGG-VPGGVFGGISGGVFGGLSGGVFGGVSGGVVGGVSGGVFGGSVGGVCGG 526
Query: 66 IVGGI-GGLIAG 76
++GGI GG++ G
Sbjct: 527 VLGGISGGMVGG 538
Score = 40.6 bits (93), Expect = 0.004
Identities = 27/73 (36%), Positives = 39/73 (52%), Gaps = 4/73 (5%)
Query: 9 MNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGV-GMVYGG 65
+ VSGG + + + GV GS+ GG GG GG+ G G + G+ G V+GG
Sbjct: 380 IGGVSGG-VVGGVSGGVFGGVPGGVFGSVSGGVFGGVPGGVFGGVSGGVFGGLCGGVFGG 438
Query: 66 IVGGIGGLIAGFV 78
I GG+ G ++G V
Sbjct: 439 ISGGVVGEVSGGV 451
Score = 40.2 bits (92), Expect = 0.005
Identities = 25/84 (29%), Positives = 40/84 (46%), Gaps = 2/84 (2%)
Query: 15 GDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLI 74
G + R + G+ +G +GG GG GG+ G GS+ G +GG+ GG+ G +
Sbjct: 174 GGVFGRASGGVFGGIVGRVSGGEFGGVCGGVSGGVFG-GSVGGICGDWFGGVPGGVFGSV 232
Query: 75 AGFVLDKNVTYNYAVGFYNSLFNG 98
+G V V+ + G +F G
Sbjct: 233 SGGVFG-GVSGGVSGGLCGGVFGG 255
Score = 40.2 bits (92), Expect = 0.005
Identities = 29/82 (35%), Positives = 41/82 (49%), Gaps = 4/82 (4%)
Query: 21 IEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGV-GMVYGGIVGGIGGLIAGF 77
I +V VS G + GG GG GG++G G + GV G V+GGI GG+ G ++G
Sbjct: 439 ISGGVVGEVSGGVFGEVSGGVVGGVSGGVVGGVSGGVFGGVPGGVFGGISGGVFGGLSGG 498
Query: 78 VLDKNVTYNYAVGFYNSLFNGT 99
V V+ G +F G+
Sbjct: 499 VFG-GVSGGVVGGVSGGVFGGS 519
Score = 39.5 bits (90), Expect = 0.008
Identities = 24/71 (33%), Positives = 38/71 (52%), Gaps = 4/71 (5%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGV-GMVYGGIVG 68
+SGG + + + VS G + GG GG GG+ G G + G+ G V+GG+ G
Sbjct: 439 ISGG-VVGEVSGGVFGEVSGGVVGGVSGGVVGGVSGGVFGGVPGGVFGGISGGVFGGLSG 497
Query: 69 GIGGLIAGFVL 79
G+ G ++G V+
Sbjct: 498 GVFGGVSGGVV 508
Score = 39.1 bits (89), Expect = 0.011
Identities = 28/81 (34%), Positives = 40/81 (48%), Gaps = 17/81 (20%)
Query: 15 GDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG------VGSIAQG---------- 58
G L+ + + GV +G ++GG+ GG GG+LG VG + G
Sbjct: 493 GGLSGGVFGGVSGGVVGGVSGGVFGGSVGGVCGGVLGGISGGMVGGVCGGRVGGPVGKTS 552
Query: 59 VGMVYGGIVGGI-GGLIAGFV 78
VG V GG VGG+ GG++ G V
Sbjct: 553 VGGVAGGPVGGVSGGMVGGSV 573
Score = 38.7 bits (88), Expect = 0.014
Identities = 26/62 (41%), Positives = 35/62 (55%), Gaps = 4/62 (6%)
Query: 26 VFGVSAF-FAGSIWGGTRGGDGGGILG--VGSIAQG-VGMVYGGIVGGIGGLIAGFVLDK 81
VFG S G ++GG+ GGD GG+ G G + G VG V GG GG+ G ++G V
Sbjct: 152 VFGGSVGGICGGVFGGSVGGDCGGVFGRASGGVFGGIVGRVSGGEFGGVCGGVSGGVFGG 211
Query: 82 NV 83
+V
Sbjct: 212 SV 213
Score = 38.7 bits (88), Expect = 0.014
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GGD+ + +V G G + GG GG GG+ G G++ G V+GG+ GG+ G
Sbjct: 93 GGDVGEEGGSVVVGGGD----GGVVGGRTGGVTGGVFG-GTVGGVCGGVFGGVSGGVFGG 147
Query: 74 IAGFVLDKNV 83
+ G V +V
Sbjct: 148 VCGGVFGGSV 157
Score = 38.3 bits (87), Expect = 0.019
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 9 MNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG---VGSIAQG-VGMVYG 64
+ VSGG + + GV +G + GG GG GG +G VG +A G VG V G
Sbjct: 508 VGGVSGGVFGGSV-GGVCGGVLGGISGGMVGGVCGGRVGGPVGKTSVGGVAGGPVGGVSG 566
Query: 65 GIVGGIGGLIAG 76
G+VGG G I G
Sbjct: 567 GMVGGSVGGICG 578
Score = 37.9 bits (86), Expect = 0.025
Identities = 22/54 (40%), Positives = 31/54 (56%), Gaps = 3/54 (5%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGV-GMVYGGIVGGIGGLIAGFV 78
G+S G + GG G GG++G G + GV G V+GG+ GG+ G I+G V
Sbjct: 438 GISGGVVGEVSGGVFGEVSGGVVGGVSGGVVGGVSGGVFGGVPGGVFGGISGGV 491
Score = 35.6 bits (80), Expect = 0.13
Identities = 23/72 (31%), Positives = 36/72 (49%), Gaps = 4/72 (5%)
Query: 8 EMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGV-GMVYGGI 66
E V GG ++ + V G+ + G + GG G GG+ G ++ GV G + GG+
Sbjct: 196 EFGGVCGG-VSGGVFGGSVGGICGDWFGGVPGGVFGSVSGGVF--GGVSGGVSGGLCGGV 252
Query: 67 VGGIGGLIAGFV 78
GG+ G + G V
Sbjct: 253 FGGVSGCVVGGV 264
Score = 35.6 bits (80), Expect = 0.13
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIG 71
VSGG + + GV G I GG GG GG G G + G V+GGIVG +
Sbjct: 140 VSGG-----VFGGVCGGVFGGSVGGICGGVFGGSVGGDCG-GVFGRASGGVFGGIVGRVS 193
Query: 72 G 72
G
Sbjct: 194 G 194
Score = 35.2 bits (79), Expect = 0.16
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 15 GDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG------VGSIAQGV-----GMVY 63
G + R+ GV +G ++GG+ GG G G GS++ GV G V
Sbjct: 186 GGIVGRVSGGEFGGVCGGVSGGVFGGSVGGICGDWFGGVPGGVFGSVSGGVFGGVSGGVS 245
Query: 64 GGIVGGIGGLIAGFVL 79
GG+ GG+ G ++G V+
Sbjct: 246 GGLCGGVFGGVSGCVV 261
Score = 35.2 bits (79), Expect = 0.16
Identities = 27/78 (34%), Positives = 37/78 (46%), Gaps = 8/78 (10%)
Query: 28 GVSAFFAGSIWGGTRGG----DGGGILGVGSIAQG-VGMVYGGIVGGIGGLIAGFVLDKN 82
GV G ++GG GG GG+ G ++ G VG V GG+VGG+ G + G V
Sbjct: 426 GVFGGLCGGVFGGISGGVVGEVSGGVF--GEVSGGVVGGVSGGVVGGVSGGVFGGV-PGG 482
Query: 83 VTYNYAVGFYNSLFNGTF 100
V + G + L G F
Sbjct: 483 VFGGISGGVFGGLSGGVF 500
Score = 34.4 bits (77), Expect = 0.28
Identities = 23/64 (35%), Positives = 30/64 (45%), Gaps = 3/64 (4%)
Query: 9 MNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGV---GSIAQGVGMVYGG 65
+ V GG + + + V GV+ G + GG GG GGI GV G G G V+ G
Sbjct: 536 VGGVCGGRVGGPVGKTSVGGVAGGPVGGVSGGMVGGSVGGICGVTVGGGGGDGSGQVHTG 595
Query: 66 IVGG 69
GG
Sbjct: 596 HGGG 599
Score = 32.5 bits (72), Expect = 1.1
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 9/51 (17%)
Query: 35 GSIWGGTRGGDGGGIL---GVGSIAQG-----VGMVYGGIVGGI-GGLIAG 76
G ++GG G +GG ++ G G + G G V+GG VGG+ GG+ G
Sbjct: 89 GELFGGDVGEEGGSVVVGGGDGGVVGGRTGGVTGGVFGGTVGGVCGGVFGG 139
>gi|1176754|sp|P45931|YQBO_BACSU HYPOTHETICAL 171.0 KD PROTEIN IN
SPOIIIC-CWLA INTERGENIC REGION >gi|1217862|dbj|BAA06947|
(D32216) ORF54 [Bacillus subtilis]
>gi|1303755|dbj|BAA12411| (D84432) YqbO [Bacillus
subtilis] >gi|2635048|emb|CAB14544| (Z99117) similar to
phage-related protein [Bacillus subtilis]
Length = 1585
Score = 43.4 bits (100), Expect = 6e-04
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 17 LATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGIGGLI 74
L T + A+ + G++ G G GG G G +GS+ GVG GG+VGGI G +
Sbjct: 738 LGTALAATDLIGMNKDNVGEKIGSAGGGLAGAATGAAIGSVIPGVGTAIGGLVGGIAGTM 797
Query: 75 AGFVLDK 81
G L K
Sbjct: 798 GGSSLGK 804
>gi|3892705|emb|CAA22155.1| (AL033545) putative protein [Arabidopsis
thaliana]
Length = 490
Score = 42.6 bits (98), Expect = 0.001
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 19/86 (22%)
Query: 8 EMNNVSGGDL--ATRIEASIVFG--VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVY 63
E+ V GGD A E V G + F G +GGT GGD GG+ G G++ +G V
Sbjct: 102 EIGGVIGGDCGGARGGEVGGVMGGDIGGLFGGE-FGGTIGGDTGGVCG-GAVGGALGGVT 159
Query: 64 GGI-------------VGGIGGLIAG 76
GG+ VGGIGGL+ G
Sbjct: 160 GGVREGEVGGDTGGVRVGGIGGLLGG 185
Score = 36.4 bits (82), Expect = 0.073
Identities = 29/71 (40%), Positives = 33/71 (45%), Gaps = 5/71 (7%)
Query: 8 EMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIV 67
E V GGD + V GV G GG RGG+ GG+LG S G V G +
Sbjct: 298 EFGGVLGGD-SGGARGGEVGGV----LGGGTGGARGGEVGGVLGGDSGGARGGEVDGVLG 352
Query: 68 GGIGGLIAGFV 78
GGIGG G V
Sbjct: 353 GGIGGARGGEV 363
Score = 35.6 bits (80), Expect = 0.13
Identities = 19/39 (48%), Positives = 24/39 (60%), Gaps = 2/39 (5%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGG-IGGLIAG 76
GG RGG+ GG++G G G GG++GG IGGL G
Sbjct: 96 GGARGGEIGGVIG-GDCGGARGGEVGGVMGGDIGGLFGG 133
Score = 35.6 bits (80), Expect = 0.13
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 8 EMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIV 67
+ V GG + + + GV G GG R G GG+LG G + G V G +
Sbjct: 142 DTGGVCGGAVGGAL-GGVTGGVREGEVGGDTGGVRVGGIGGLLGGGDRGESGGEVGGVLG 200
Query: 68 GGIGGLIAG 76
GGIGG G
Sbjct: 201 GGIGGARGG 209
Score = 35.2 bits (79), Expect = 0.16
Identities = 29/75 (38%), Positives = 36/75 (47%), Gaps = 8/75 (10%)
Query: 8 EMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQG-VGMVYG 64
E+ V GGD+ V GV G GG RGG+ GG++G G + G VG V G
Sbjct: 210 ELGGVLGGDIGGA-RGGEVGGV----LGGDRGGARGGEVGGVIGGDSGGVRGGEVGGVLG 264
Query: 65 GIVGGIGGLIAGFVL 79
G GG G G +L
Sbjct: 265 GDSGGARGGAVGEIL 279
Score = 35.2 bits (79), Expect = 0.16
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 39 GGTRGGDGGGILGV---GSIAQGVGMVYGGIVGGIGGLIAGFVLDKNV---TYNYAVGFY 92
GG GGD GG+ G G+I G V GG VGG G + G V + V T VG
Sbjct: 120 GGVMGGDIGGLFGGEFGGTIGGDTGGVCGGAVGGALGGVTGGVREGEVGGDTGGVRVGGI 179
Query: 93 NSLFNG 98
L G
Sbjct: 180 GGLLGG 185
Score = 34.4 bits (77), Expect = 0.28
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 8 EMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG---VGSIAQGVGMVYG 64
E+ V GGD V GV G GG RGG+ GG+LG G+ VG + G
Sbjct: 226 EVGGVLGGDRGGA-RGGEVGGV----IGGDSGGVRGGEVGGVLGGDSGGARGGAVGEILG 280
Query: 65 GIVGG-----IGGLIAG 76
G GG +GG++ G
Sbjct: 281 GGTGGARGGEVGGVLGG 297
Score = 33.2 bits (74), Expect = 0.63
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGG-----IGGLIAGFVLDKNVTY 85
GG RGG+ G+LG G I G GG++GG GG + F+++K V +
Sbjct: 340 GGARGGEVDGVLG-GGIGGARGGEVGGVLGGDSGGTRGGDLVEFLVEKVVVH 390
Score = 32.8 bits (73), Expect = 0.83
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 8 EMNNVSGGDLATR---IEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG 64
E+ V GGD I+ G + G GG GG+ GG+LG S G V G
Sbjct: 258 EVGGVLGGDSGGARGGAVGEILGGGTGGARGGEVGGVLGGEFGGVLGGDSGGARGGEVGG 317
Query: 65 GIVGGIGGLIAGFV 78
+ GG GG G V
Sbjct: 318 VLGGGTGGARGGEV 331
Score = 32.1 bits (71), Expect = 1.4
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 43 GGDGGGILGVGS---IAQGVGMVYGGIVGGIGG 72
GG GGG+LG G + GVG GG +GG+ G
Sbjct: 76 GGGGGGVLGGGGTEGVPGGVGGARGGEIGGVIG 108
Score = 31.7 bits (70), Expect = 1.9
Identities = 22/48 (45%), Positives = 27/48 (55%), Gaps = 5/48 (10%)
Query: 35 GSIWGGTRG---GDGGGILGVGSIAQGVGMVYGGIVGG-IGGLIAGFV 78
G + GG RG G+ GG+LG G I G GG++GG IGG G V
Sbjct: 181 GLLGGGDRGESGGEVGGVLG-GGIGGARGGELGGVLGGDIGGARGGEV 227
>gi|2772914 (AF029249) precollagen D [Mytilus edulis]
Length = 922
Score = 40.6 bits (93), Expect = 0.004
Identities = 21/49 (42%), Positives = 29/49 (58%), Gaps = 1/49 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G+ AG + GG GG GG+ G G + G+G + GG+ GG+GGL G
Sbjct: 737 GLGGLGAGGLGGGL-GGGLGGLGGAGGLGGGLGGLGGGLGGGLGGLGGG 784
Score = 37.5 bits (85), Expect = 0.033
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+GG+ A + G G GG GG GGG+ G+G A G+G GG+ GG+GG
Sbjct: 718 AGGNAAAGAGPGVGPGGLGGLGGLGAGGLGGGLGGGLGGLGG-AGGLGGGLGGLGGGLGG 776
Query: 73 LIAG 76
+ G
Sbjct: 777 GLGG 780
Score = 29.7 bits (65), Expect = 7.2
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG GG GGG+ G+G A G G GG GG AG
Sbjct: 768 GGLGGGLGGGLGGLGGGAGGAG------AGGNGGAGAG 799
>gi|121627|sp|P09789|GRP1_PETHY GLYCINE-RICH CELL WALL STRUCTURAL
PROTEIN 1 PRECURSOR >gi|82244|pir||A26099 glycine-rich
cell wall structural protein - garden petunia
>gi|20553|emb|CAA27866| (X04335) precursor polypeptide
(aa -27 to 357) [Petunia x hybrida]
>gi|225181|prf||1210313A Gly rich structural protein
[Petunia sp.]
Length = 384
Score = 39.5 bits (90), Expect = 0.008
Identities = 22/51 (43%), Positives = 25/51 (48%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
FG G GG GG GGG+ G G + G G GG +GG GG GF
Sbjct: 61 FGRGRGAGGGFGGGAGGGAGGGLGGGGGLGGGGGAGGGGGLGGGGGAGGGF 111
Score = 38.7 bits (88), Expect = 0.014
Identities = 23/54 (42%), Positives = 26/54 (47%), Gaps = 5/54 (9%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGM-----VYGGIVGGIGGLIAG 76
GV G + GG GG GGG G G I G G GG+ GG+GG AG
Sbjct: 198 GVGGGAGGGLGGGVGGGGGGGSGGGGGIGGGSGHGGGFGAGGGVGGGVGGGAAG 251
Score = 35.6 bits (80), Expect = 0.13
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG-----GIVGGIGGLIAGFV 78
FG G + GG GG GGG G G G+G G G GG+GG AG V
Sbjct: 235 FGAGGGVGGGVGGGAAGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGAAGGV 291
Score = 34.0 bits (76), Expect = 0.37
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 28 GVSAFFAGSIWGGTR-GGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GV AG + GG GG GGG +G GS G GG+ GG GG + G
Sbjct: 282 GVGGGAAGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGG 331
Score = 33.2 bits (74), Expect = 0.63
Identities = 18/38 (47%), Positives = 21/38 (54%), Gaps = 1/38 (2%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GG GG GGG+ G G + G G GG GG+GG
Sbjct: 109 GGFGGGAGGGAGGGLGGGGGLGGGGGGGAGG-GGGVGG 145
Score = 32.8 bits (73), Expect = 0.83
Identities = 19/42 (45%), Positives = 21/42 (49%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG GG GGG+ G G G G GG G GG AG
Sbjct: 197 GGVGGGAGGGLGGGVGGGGGGGSGGGGGIGGGSGHGGGFGAG 238
Score = 32.5 bits (72), Expect = 1.1
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDG--GGILGVGSIAQGVGMVYGGIVGGI 70
+GG + A G F G GG GG G GG G + G G GG VGG
Sbjct: 155 AGGGVGGGAGAGGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGVGGG 214
Query: 71 GG 72
GG
Sbjct: 215 GG 216
Score = 32.5 bits (72), Expect = 1.1
Identities = 20/38 (52%), Positives = 21/38 (54%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQG----VGMVYGGIVGGIGG 72
GG GG GGG LG GS G G V GG GG+GG
Sbjct: 256 GGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGAAGGVGG 293
Score = 32.5 bits (72), Expect = 1.1
Identities = 19/40 (47%), Positives = 22/40 (54%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFV 78
GG GG GGG +G GS G GG+ GG GG + G V
Sbjct: 172 GGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGV 211
Score = 31.7 bits (70), Expect = 1.9
Identities = 19/42 (45%), Positives = 21/42 (49%), Gaps = 1/42 (2%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G GG GG GGG G G G V GG GG+GG + G
Sbjct: 173 GGFGGGGGGGVGGGSGHGGGFGAG-GGVGGGAGGGLGGGVGG 213
Score = 31.7 bits (70), Expect = 1.9
Identities = 21/51 (41%), Positives = 22/51 (42%), Gaps = 2/51 (3%)
Query: 28 GVSAFFAGSIWGGTRGG--DGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GGG+ G G G G GG G GG AG
Sbjct: 106 GAGGGFGGGAGGGAGGGLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGAG 156
Score = 30.9 bits (68), Expect = 3.2
Identities = 21/46 (45%), Positives = 22/46 (47%)
Query: 26 VFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIG 71
V G S G GG GG GG LG G A G G + GG GG G
Sbjct: 305 VGGGSGHGGGFGAGGGVGGGAGGGLGGGGGAGGGGGIGGGHGGGFG 350
Score = 29.7 bits (65), Expect = 7.2
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G + GG G GGG G G + G G GG GG GG G
Sbjct: 74 GAGGGAGGGLGGGGGLGGGGGAGGGGGLGGG-GGAGGGFGGGAGGGAGG 121
Score = 29.3 bits (64), Expect = 9.4
Identities = 18/42 (42%), Positives = 19/42 (44%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG GG GGG G G G GG VGG G G
Sbjct: 127 GGLGGGGGGGAGGGGGVGGGAGSGGGFGAGGGVGGGAGAGGG 168
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/38 (44%), Positives = 18/38 (46%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG GG GG+ G G G G GG G GG AG
Sbjct: 281 GGVGGGAAGGVGGGGGFGGGGGGGVGGGSGHGGGFGAG 318
Score = 29.3 bits (64), Expect = 9.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G I GG+ G GGG G + GVG GG GG GG
Sbjct: 223 GGIGGGS--GHGGGFGAGGGVGGGVG---GGAAGGGGG 255
Score = 29.3 bits (64), Expect = 9.4
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G A G + GG GG GGG G G G+ GG +GG GG AG
Sbjct: 92 GGGAGGGGGLGGG--GGAGGGFGGGAGGGAGGGLGGGGGLGGGGGGGAG 138
>gi|4972048|emb|CAB43916.1| (AL078470) glycine-rich protein like
[Arabidopsis thaliana]
Length = 158
Score = 38.7 bits (88), Expect = 0.014
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 35 GSIWGGTRGGDGG--GILGVGSIAQGVGMVYGGI--VGGIGGLIAGFVLDKNV 83
G+ GG GG GG G+L VG + G+G + GG+ +GG+GGL G L V
Sbjct: 59 GAGLGGVAGGVGGVAGVLPVGGVGGGIGGLGGGVGGLGGLGGLGGGSGLGHGV 111
Score = 36.0 bits (81), Expect = 0.096
Identities = 23/49 (46%), Positives = 26/49 (52%), Gaps = 5/49 (10%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMV-----YGGIVGGIGGLIAG 76
FAG GG GG G+G +A GVG V GG+ GGIGGL G
Sbjct: 43 FAGVGGAAGIGGAGGVGAGLGGVAGGVGGVAGVLPVGGVGGGIGGLGGG 91
>gi|2494114 (AC002376) Contains similarity to Daucus glycine-rich
cell wall protein (gb|D29974). EST gb|R29840 comes from
this gene. [Arabidopsis thaliana]
Length = 212
Score = 38.7 bits (88), Expect = 0.014
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 34 AGSIWG-GTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFV 78
AG I G G GG GGG+ GVG + + G+ GG +GG G++ G +
Sbjct: 163 AGGIGGLGGLGGAGGGLGGVGGLGKAGGIGVGGGIGGGHGVVGGVI 208
Score = 34.8 bits (78), Expect = 0.22
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFV 78
G+ F + GG GG GGG+ G+G + GVG + G VGG+GG G V
Sbjct: 106 GIGGFHSIGGVGGL-GGVGGGVGGLGGVGGGVGGLGG--VGGLGGAGLGGV 153
Score = 33.6 bits (75), Expect = 0.48
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 35 GSIWGGTRG--GDGGGILGVGSIA-------QGVGMVYGGI--VGGIGGL 73
G + GG G G GGG+ G+G + GVG V GGI GGIGGL
Sbjct: 120 GGVGGGVGGLGGVGGGVGGLGGVGGLGGAGLGGVGGVGGGIGKAGGIGGL 169
Score = 33.6 bits (75), Expect = 0.48
Identities = 16/35 (45%), Positives = 21/35 (59%), Gaps = 2/35 (5%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG G G G+ GVG + G+G G +GG+GGL
Sbjct: 140 GGVGGLGGAGLGGVGGVGGGIGKAGG--IGGLGGL 172
Score = 31.3 bits (69), Expect = 2.4
Identities = 19/42 (45%), Positives = 24/42 (56%), Gaps = 2/42 (4%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGI--VGGIGGL 73
A I G G GG+ GVG G+G V GG+ +GG+GGL
Sbjct: 104 AAGIGGFHSIGGVGGLGGVGGGVGGLGGVGGGVGGLGGVGGL 145
>gi|3875801|emb|CAB02926.1| (Z81059) F11F1.4 [Caenorhabditis
elegans]
Length = 240
Score = 38.3 bits (87), Expect = 0.019
Identities = 26/71 (36%), Positives = 35/71 (48%), Gaps = 7/71 (9%)
Query: 21 IEASIVFGVSAFFAGSIWGGTRGGDGG--GILGVGSIA-----QGVGMVYGGIVGGIGGL 73
+ +IV V G + G GG+GG GILG G + G+G V GG GG+GG+
Sbjct: 12 VSIAIVTAVPLEGQGGLGGILGGGEGGLGGILGNGGLGGILGGNGLGGVLGGEDGGLGGI 71
Query: 74 IAGFVLDKNVT 84
I + N T
Sbjct: 72 IGQLLGSANAT 82
>gi|121640|sp|P27483|GRP_ARATH GLYCINE-RICH CELL WALL STRUCTURAL
PROTEIN PRECURSOR >gi|72320|pir||KNMU glycine-rich cell
wall protein precursor - Arabidopsis thaliana
>gi|16293|emb|CAA41249| (X58338) glycine rich protein
[Arabidopsis thaliana]
Length = 338
Score = 38.3 bits (87), Expect = 0.019
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GGG G G I G G GG GG+GG G
Sbjct: 43 GAGGGFGGGAGGGAGGGLGGGAGGGGGIGGGAG---GGAGGGLGGGAGG 88
Score = 37.5 bits (85), Expect = 0.033
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+GG L I G G + GG GG GGG G G + G G GGI GG GG
Sbjct: 106 AGGGLGGGHGGGIGGGAGGGSGGGLGGGIGGGAGGGAGGGGGLGGGHG---GGIGGGAGG 162
Query: 73 LIAG 76
G
Sbjct: 163 GAGG 166
Score = 36.0 bits (81), Expect = 0.096
Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG L FG G GG GG GGG+ G A G G + GG GG GG
Sbjct: 25 GGGLGGGFGGGKGFGGGIGAGGGFGGGAGGGAGGGL---GGGAGGGGGIGGGAGGGAGGG 81
Query: 74 IAG 76
+ G
Sbjct: 82 LGG 84
Score = 35.2 bits (79), Expect = 0.16
Identities = 21/49 (42%), Positives = 23/49 (46%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G+ G I GG GG GGG+ G G G GG GG GGL G
Sbjct: 167 GLGGGHGGGIGGGAGGGSGGGLGGGIGGGAGGGAGGGGGAGGGGGLGGG 215
Score = 35.2 bits (79), Expect = 0.16
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGI 70
+GG L I G G + GG GG GGG G G + G+G GG GG
Sbjct: 86 AGGGLGGGHGGGIGGGAGGGAGGGLGGGHGGGIGGGAGGGSGGGLGGGIGGGAGGGAGGG 145
Query: 71 GGLIAG 76
GGL G
Sbjct: 146 GGLGGG 151
Score = 34.8 bits (78), Expect = 0.22
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+GG L I G G + GG GG GGG G G A G G + GG GG GG
Sbjct: 164 AGGGLGGGHGGGIGGGAGGGSGGGLGGGIGGGAGGG-AGGGGGAGGGGGLGGGHGGGFGG 222
Query: 73 LIAG 76
G
Sbjct: 223 GAGG 226
Score = 34.4 bits (77), Expect = 0.28
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G+ G GG GG GGGI G G G+ GGI GG GG G
Sbjct: 155 GIGGGAGGGAGGGLGGGHGGGIGGGAGGGSGGGL-GGGIGGGAGGGAGG 202
Score = 34.0 bits (76), Expect = 0.37
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GGG G G G V GG GG GG G
Sbjct: 263 GAGGGFGGGAGGGAGGGAGGGFGGGAGGGHG-GGVGGGFGGGSGGGFGG 310
Score = 32.8 bits (73), Expect = 0.83
Identities = 24/65 (36%), Positives = 27/65 (40%), Gaps = 2/65 (3%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGIG 71
GG L I G G + GG GG GGG G G + G+G GG GG G
Sbjct: 145 GGGLGGGHGGGIGGGAGGGAGGGLGGGHGGGIGGGAGGGSGGGLGGGIGGGAGGGAGGGG 204
Query: 72 GLIAG 76
G G
Sbjct: 205 GAGGG 209
Score = 32.8 bits (73), Expect = 0.83
Identities = 23/51 (45%), Positives = 25/51 (48%), Gaps = 5/51 (9%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGIGGLIAG 76
G A G I GG GG GGG+ G G + G G GGI GG GG G
Sbjct: 61 GGGAGGGGGIGGGAGGGAGGGLGGGAGGGLGGGHG---GGIGGGAGGGAGG 108
Score = 32.8 bits (73), Expect = 0.83
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G GG GG GGGI G G+ G + GG GGIGG G
Sbjct: 77 GAGGGLGGGAGGGLGGGHGGGI-GGGAGGGAGGGLGGGHGGGIGGGAGG 124
Score = 32.1 bits (71), Expect = 1.4
Identities = 24/64 (37%), Positives = 27/64 (41%), Gaps = 5/64 (7%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+GG L + G G GG GG GGG G I G G GG GG+GG
Sbjct: 78 AGGGLGGGAGGGLGGGHGGGIGGGAGGGAGGGLGGG--HGGGIGGGAG---GGSGGGLGG 132
Query: 73 LIAG 76
I G
Sbjct: 133 GIGG 136
Score = 32.1 bits (71), Expect = 1.4
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
GV F G GG GG GGG G G G +GG G GG GF
Sbjct: 295 GVGGGFGGGSGGGFGGGAGGGAGG------GAGGGFGGGGGAGGGFGGGF 338
Score = 31.7 bits (70), Expect = 1.9
Identities = 21/51 (41%), Positives = 23/51 (44%), Gaps = 5/51 (9%)
Query: 28 GVSAFFAGSIWGGTRG--GDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G I GG G G GGG G G + G G GG GG GG + G
Sbjct: 183 GSGGGLGGGIGGGAGGGAGGGGGAGGGGGLGGGHG---GGFGGGAGGGLGG 230
Score = 31.7 bits (70), Expect = 1.9
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GGG G G G +GG GG G AG
Sbjct: 235 GTGGGFGGGAGGGAGGGAGGGF--GGGAGGGAGGGFGGGAGGGAGGGAG 281
Score = 31.7 bits (70), Expect = 1.9
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GGG G G+ G GG GG GG + G
Sbjct: 251 GAGGGFGGGAGGGAGGGFGGG-AGGGAGGGAGGGFGGGAGGGHGGGVGG 298
Score = 31.7 bits (70), Expect = 1.9
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILG------VGSIAQGVGMVYGGIVGGIGGLIAGF 77
G F G GG GG GGG G G G G GG GG GG GF
Sbjct: 279 GAGGGFGGGAGGGHGGGVGGGFGGGSGGGFGGGAGGGAGGGAGGGFGGGGGAGGGF 334
Score = 30.9 bits (68), Expect = 3.2
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G GGT GG GGG G G+ G GG GG GG G
Sbjct: 223 GAGGGLGGGAGGGTGGGFGGG-AGGGAGGGAGGGFGGGAGGGAGGGFGG 270
Score = 30.5 bits (67), Expect = 4.2
Identities = 20/52 (38%), Positives = 21/52 (39%), Gaps = 3/52 (5%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGI---LGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G GG GG GGG+ G GS G GG GG GG G
Sbjct: 275 GAGGGAGGGFGGGAGGGHGGGVGGGFGGGSGGGFGGGAGGGAGGGAGGGFGG 326
Score = 29.7 bits (65), Expect = 7.2
Identities = 20/43 (46%), Positives = 22/43 (50%), Gaps = 4/43 (9%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
AG GG GG GG LG G G+G GG GG GG + G
Sbjct: 74 AGGGAGGGLGGGAGGGLG-GGHGGGIG---GGAGGGAGGGLGG 112
Score = 29.7 bits (65), Expect = 7.2
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 33 FAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGIGGLIAG 76
F G GG GG GGG G G G G GG GG GG G
Sbjct: 220 FGGGAGGGLGGGAGGGTGGGFGGGAGGGAG---GGAGGGFGGGAGG 262
Score = 29.7 bits (65), Expect = 7.2
Identities = 21/54 (38%), Positives = 23/54 (41%), Gaps = 4/54 (7%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGG--IGGLIAGF 77
G G GG GG GGG G G G G +GG GG GG+ GF
Sbjct: 247 GAGGGAGGGFGGGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGHGGGVGGGF 300
Score = 29.7 bits (65), Expect = 7.2
Identities = 24/66 (36%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGI 70
SGG L I G GG GG GGG G G + G G GG GG
Sbjct: 184 SGGGLGGGIGGGAGGGAGGGGGAGGGGGLGGGHGGGFGGGAGGGLGGGAG---GGTGGGF 240
Query: 71 GGLIAG 76
GG G
Sbjct: 241 GGGAGG 246
Score = 29.3 bits (64), Expect = 9.4
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 25 IVFGV---SAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
+V GV F ++ GG GG GGG G G+G GG GG GG G
Sbjct: 5 VVIGVVECRRFEKETLGGGGGGGLGGGFGGGKGFGGGIG-AGGGFGGGAGGGAGG 58
Score = 29.3 bits (64), Expect = 9.4
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G GG GG GGG G G G GG GG+GG G
Sbjct: 259 GAGGGAGGGFGGGAGGGAGGG--AGGGFGGGAG---GGHGGGVGGGFGG 302
>gi|3875808|emb|CAB07573.1| (Z93377) cDNA EST EMBL:C11010 comes from
this gene; cDNA EST EMBL:C12976 comes from this gene
[Caenorhabditis elegans]
Length = 340
Score = 38.3 bits (87), Expect = 0.019
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 13/76 (17%)
Query: 14 GGDLATRIEA---SIVFGVSAFFAGSIWGG----------TRGGDGGGILGVGSIAQGVG 60
GG ++I A S+ GV A + + GG T+GG GGG G GS+AQGV
Sbjct: 179 GGGAVSQISAAPGSMAQGVGAPGSAAQGGGAQGPVSQISVTQGGRGGGTAGTGSVAQGVT 238
Query: 61 MVYGGIVGGIGGLIAG 76
GG GG AG
Sbjct: 239 AQGSAAQGGGGGGTAG 254
Score = 29.7 bits (65), Expect = 7.2
Identities = 21/53 (39%), Positives = 26/53 (48%), Gaps = 8/53 (15%)
Query: 6 SIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQG 58
S+ GG T S+ GV+A GS +GG GGG G GS+AQG
Sbjct: 217 SVTQGGRGGGTAGT---GSVAQGVTA--QGS---AAQGGGGGGTAGSGSVAQG 261
>gi|4504915|ref|NP_002266.1|| keratin 15
>gi|125081|sp|P19012|K1CO_HUMAN KERATIN, TYPE I
CYTOSKELETAL 15 (CYTOKERATIN 15) (K15) (CK 15)
>gi|71525|pir||KRHU5 keratin 15, type I, cytoskeletal -
human >gi|34071|emb|CAA30535| (X07696) cytokeratin 15
(AA 1 - 456) [Homo sapiens] >gi|6729679|gb|AAF27047.1|
(AF202320) keratin 15 [Homo sapiens]
Length = 456
Score = 37.9 bits (86), Expect = 0.025
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 11 NVSGGDLATRIEASIVFGVSAFFAGSIWGGTR----GGDGGGILGVGSIAQGVGMVYGG- 65
++SGG + I AS VS+ G GG R GG G + G G GVG +GG
Sbjct: 34 SLSGGGGSRSISASSARFVSSGSGGGYGGGMRVCGFGGGAGSVFG-GGFGGGVGGGFGGG 92
Query: 66 IVGGIGGLIAG 76
GG GGL++G
Sbjct: 93 FGGGDGGLLSG 103
>gi|3550539|emb|CAA06944| (AJ006277) K15 intermediate filament type
I keratin [Ovis aries]
Length = 453
Score = 37.9 bits (86), Expect = 0.025
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGV--GSIAQGVGMVYGGIVGGIG 71
GG + I AS VS+ AG GG GG G G G G G G +G GG G
Sbjct: 37 GGGGSRTISASSARFVSSGSAGGYGGGFGGGAGSGYGGGFGGGFGGGFGSGFGDFGGGDG 96
Query: 72 GLIAG 76
GL++G
Sbjct: 97 GLLSG 101
Score = 29.3 bits (64), Expect = 9.4
Identities = 20/58 (34%), Positives = 24/58 (40%), Gaps = 4/58 (6%)
Query: 23 ASIVFGVSAFFAGSIWGGTRGGDGGGILGVGS----IAQGVGMVYGGIVGGIGGLIAG 76
+S FG S+ GS+ G G GG + G G A V G GG GG G
Sbjct: 9 SSSTFGGSSTRGGSLLAGGGGFGGGSLYGGGGSRTISASSARFVSSGSAGGYGGGFGG 66
>gi|6706437|emb|CAB66004.1| (AJ271041) Gly-rich protein
[Drosophila melanogaster]
Length = 286
Score = 37.9 bits (86), Expect = 0.025
Identities = 28/66 (42%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVG-SIAQGVGMVYGGIVGGIG 71
SGG + G S F G I GG GG GGG G G S G G GG GG G
Sbjct: 32 SGGGSGGGLGGGFGGGSSGGFGGGIGGGFGGGFGGGSGGGGFSSGGGGGFSSGGGGGGGG 91
Query: 72 GLIAGF 77
G GF
Sbjct: 92 GFGGGF 97
Score = 34.4 bits (77), Expect = 0.28
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNV 83
F G GG+ GG GGG G GSI GG GG GG A ++ K++
Sbjct: 93 FGGGFGGGSGGGSGGGFGGGGSI--------GGFGGGGGGGGATTLVQKHI 135
Score = 32.1 bits (71), Expect = 1.4
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
F+ GG GG GGG G G G GG +GG GG
Sbjct: 81 FSSGGGGGGGGGFGGGFGGGSGGGSGGGFGGGGSIGGFGG 120
Score = 31.7 bits (70), Expect = 1.9
Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG+ GG GGG LG G G GGI GG GG G
Sbjct: 30 GGSGGGSGGG-LGGGFGGGSSGGFGGGIGGGFGGGFGG 66
Score = 30.9 bits (68), Expect = 3.2
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 28 GVSAFFAGSIWGGTRGGD----GGGILGVGSIAQGVGMVYGGIVGGIGG 72
G+ F G GG+ GG GGG G G G GG GG GG
Sbjct: 55 GIGGGFGGGFGGGSGGGGFSSGGGGGFSSGGGGGGGGGFGGGFGGGSGG 103
Score = 30.1 bits (66), Expect = 5.5
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GG+ GG GGG G GS G + GG GG GG
Sbjct: 30 GGSGGGSGGGLGGG-FGGGSSGGFGGGIGGGFGGGFGG 66
>gi|1722872|sp|P54334|XKDO_BACSU PHAGE-LIKE ELEMENT PBSX PROTEIN
XKDO >gi|1225953|emb|CAA94037| (Z70177) homologous to
yqbO of the skin element [Bacillus subtilis]
>gi|2633622|emb|CAB13125| (Z99110) PBSX prophage
[Bacillus subtilis]
Length = 1332
Score = 37.9 bits (86), Expect = 0.025
Identities = 29/79 (36%), Positives = 38/79 (47%), Gaps = 7/79 (8%)
Query: 26 VFGVSAFFAGSIWGGTRGGDGGGILG--VG----SIAQGVGMVYGGIVGGIGGLIAGFVL 79
V + AG+ G T G + G +G VG +I +G + GG+VGGIGG AG +
Sbjct: 422 VGSIGGRIAGAEAGATAGAEAGATIGSFVGPEGTAIGGAIGGIGGGLVGGIGGEEAGKNI 481
Query: 80 DKNV-TYNYAVGFYNSLFN 97
K T NSLFN
Sbjct: 482 GKMFDTSKLKESISNSLFN 500
>gi|3875800|emb|CAB02925.1| (Z81059) cDNA EST yk422f1.5 comes from
this gene [Caenorhabditis elegans]
Length = 249
Score = 37.5 bits (85), Expect = 0.033
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 35 GSIWGGTRGGDGGGILGVGSIA-----QGVGMVYGGIVGGIGGLIAGFVLDKNVT 84
G I GG GG GG ILG G + G+G V GG GG+GG+I + N T
Sbjct: 35 GGILGGGEGGLGG-ILGNGGLGGILGGNGLGGVLGGEDGGLGGIIGQLLGSANAT 88
Score = 30.5 bits (67), Expect = 4.2
Identities = 20/48 (41%), Positives = 26/48 (53%), Gaps = 4/48 (8%)
Query: 29 VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
V+A G I G G GGILG G G+G + G GG+GG++ G
Sbjct: 17 VTAVPLGGILGRNGQGGLGGILGGGE--GGLGGILGN--GGLGGILGG 60
>gi|81623|pir||JQ1060 glycine-rich protein 1 - Arabidopsis thaliana
(fragment) >gi|259443|bbs|117606 (S47405) glycine-rich
protein, atGRP {clone atGRP-1} [Arabidopsis thaliana,
C24, Peptide Partial, 210 aa] [Arabidopsis thaliana]
Length = 210
Score = 37.5 bits (85), Expect = 0.033
Identities = 21/46 (45%), Positives = 23/46 (49%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
FG A G GG GG GGG+ G G G G +GG GG GG
Sbjct: 64 FGGGAGGGGGHGGGAGGGFGGGVGGGGGHGGGAGGGFGGGAGGGGG 109
Score = 37.5 bits (85), Expect = 0.033
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G GG GG GGG G + G G +GG GG GG GF
Sbjct: 6 GGFGGGAGGGHGGGAGAGGGLGGGAGGGFGGGAGGGGGAGGGF 48
Score = 35.2 bits (79), Expect = 0.16
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GGG G G G G GG GG GG G
Sbjct: 139 GAGGGFGGGAGGGAGGGFGGGAGGGGGHGGGAG---GGAGGGFGGGAGG 184
Score = 34.8 bits (78), Expect = 0.22
Identities = 19/38 (50%), Positives = 20/38 (52%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GG GG GGG G G G G +GG VGG GG
Sbjct: 54 GGHGGGAGGGFGGGAGGGGGHGGGAGGGFGGGVGGGGG 91
Score = 34.4 bits (77), Expect = 0.28
Identities = 20/46 (43%), Positives = 21/46 (45%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
FG G GG GG GGG G G G G +GG GG GG
Sbjct: 82 FGGGVGGGGGHGGGAGGGFGGGAGGGGGHGGGAGGGFGGGAGGGGG 127
Score = 34.0 bits (76), Expect = 0.37
Identities = 18/38 (47%), Positives = 19/38 (49%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GG GG GGG G G G G +GG GG GG
Sbjct: 168 GGAGGGAGGGFGGGAGGGGGHGGGAGGGFGGGAGGGGG 205
Score = 34.0 bits (76), Expect = 0.37
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
FG A G GG GG GGG G G G G GG GG GG G
Sbjct: 100 FGGGAGGGGGHGGGAGGGFGGGAGGGGGQGGGAG---GGFGGGAGGGFGG 146
Score = 33.6 bits (75), Expect = 0.48
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GGG G A G G GG GG GG + G
Sbjct: 43 GAGGGFGGGAGGGHGGGAGGGF---GGGAGGGGGHGGGAGGGFGGGVGG 88
Score = 32.8 bits (73), Expect = 0.83
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGI-LGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GGG G G A G G GG GG GG G
Sbjct: 131 GAGGGFGGGAGGGFGGGAGGGAGGGFGGGAGGGGGHGGGAGGGAGGGFGG 180
Score = 32.8 bits (73), Expect = 0.83
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G A G + GG GG GGG G G G G GG GG GG G
Sbjct: 17 GGGAGAGGGLGGGAGGGFGGGAGGGGGAGGGFG---GGAGGGHGGGAGG 62
Score = 31.7 bits (70), Expect = 1.9
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGIGG 72
FG A G GG GG GGG G G G G +GG GG GG
Sbjct: 118 FGGGAGGGGGQGGGAGGGFGGGAGGGFGGGAGGGAGGGFGGGAGGGGG 165
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILG-VGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G + GG GG GGG G G A G G GG GG GG G
Sbjct: 77 GAGGGFGGGVGGG--GGHGGGAGGGFGGGAGGGGGHGGGAGGGFGGGAGG 124
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
FG A G GG GG GGG G A G G GG GG GG G
Sbjct: 156 FGGGAGGGGGHGGGAGGGAGGGF---GGGAGGGGGHGGGAGGGFGGGAGG 202
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/38 (44%), Positives = 18/38 (46%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GG GG GGG G G G +GG GG GG
Sbjct: 150 GGAGGGFGGGAGGGGGHGGGAGGGAGGGFGGGAGGGGG 187
Score = 29.7 bits (65), Expect = 7.2
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
FG A G GG GG GGG G G G +GG GG GG
Sbjct: 34 FGGGAGGGGGAGGGFGGGAGGGHGG------GAGGGFGGGAGGGGG 73
Score = 29.7 bits (65), Expect = 7.2
Identities = 18/45 (40%), Positives = 21/45 (46%)
Query: 32 FFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
F G+ GG +GG GG G G+ G GG GG GG G
Sbjct: 118 FGGGAGGGGGQGGGAGGGFGGGAGGGFGGGAGGGAGGGFGGGAGG 162
Score = 29.3 bits (64), Expect = 9.4
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G GG GG GGG G G G GG GG GG G
Sbjct: 21 GAGGGLGGGAGGGFGGGAGGGGGAGGGFGGGAG---GGHGGGAGGGFGG 66
>gi|2909467|emb|CAA17353| (AL021930) PE_PGRS [Mycobacterium
tuberculosis]
Length = 957
Score = 37.1 bits (84), Expect = 0.043
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRG-GDGGGILGVGSIAQGVGMVYGGIVGGIG 71
+GG+ A+ V G F GS GG G G GG+ G + G G GG G
Sbjct: 223 AGGNAGLLFGAAGVGGAGGFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAG 282
Query: 72 GLIAGFVLDKNVTYNYAVGFYNSLFNG 98
G AG + T + GF +S F G
Sbjct: 283 G--AGGLFGAGGTGGHG-GFADSSFGG 306
Score = 31.3 bits (69), Expect = 2.4
Identities = 26/64 (40%), Positives = 31/64 (47%), Gaps = 9/64 (14%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG 69
N +GG AT A+ G AG I GT GG+GG G IA G G + G GG
Sbjct: 576 NGGNGGHGATNTAATATGGAGG--AGGILFGT-GGNGG----TGGIATGAGGIGG--AGG 626
Query: 70 IGGL 73
GG+
Sbjct: 627 AGGV 630
Score = 30.9 bits (68), Expect = 3.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GV A G+ G GG+ G + G + G G +GG GG
Sbjct: 209 GVVALTGGAGGAGGAGGNAGLLFGAAGVGGAGGFTNGSALGGAGG 253
Score = 29.7 bits (65), Expect = 7.2
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG-GIVGGI 70
V+GGD A ++ +A AG I G GGI G G G+++G G GG
Sbjct: 331 VAGGDGGAGGNAGMLALGAAGGAGGIGGDGGTLTAGGIGGAGGAGGNAGLLFGSGGSGGA 390
Query: 71 GG 72
GG
Sbjct: 391 GG 392
>gi|3875802|emb|CAB02927.1| (Z81059) F11F1.5 [Caenorhabditis
elegans]
Length = 246
Score = 37.1 bits (84), Expect = 0.043
Identities = 23/55 (41%), Positives = 29/55 (51%), Gaps = 6/55 (10%)
Query: 35 GSIWGGTRGGDGGGILGVGSIA-----QGVGMVYGGIVGGIGGLIAGFVLDKNVT 84
G I GG GG GG ILG G + G+G + GG GG+GG+I + N T
Sbjct: 35 GGILGGGEGGLGG-ILGNGGLGGILGGNGLGGILGGEDGGLGGIIGQLLGSANAT 88
Score = 33.6 bits (75), Expect = 0.48
Identities = 21/48 (43%), Positives = 27/48 (55%), Gaps = 4/48 (8%)
Query: 29 VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
V+A G I GG G GGILG G G+G + G GG+GG++ G
Sbjct: 17 VTAVPLGGILGGNGQGGLGGILGGGE--GGLGGILGN--GGLGGILGG 60
>gi|4557697|ref|NP_000412.1|| keratin 10 >gi|88041|pir||A31994
keratin 10, type I, epidermal - human >gi|623409
(J04029) keratin 10 [Homo sapiens]
Length = 561
Score = 36.7 bits (83), Expect = 0.056
Identities = 24/56 (42%), Positives = 31/56 (54%), Gaps = 6/56 (10%)
Query: 27 FGVSAF---FAGSIWGGTRGGD--GGGILGVGSIAQG-VGMVYGGIVGGIGGLIAG 76
+G S+F + GS GG+ GG GGG G G G G +GG GG GGL++G
Sbjct: 82 YGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSG 137
Score = 32.5 bits (72), Expect = 1.1
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
Query: 2 RELTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGT--RGGDGGGILGVGSIAQGV 59
++ +S GG + RI +S F +G GG+ RG GGG G G
Sbjct: 10 KQFSSSRSGGGGGGGSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFG------GS 63
Query: 60 GMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGFYNSLFNG 98
YGG+ G GG G + +Y F F G
Sbjct: 64 SGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGG 102
>gi|3880303|emb|CAA90992.1| (Z54238) T28C6.1 [Caenorhabditis
elegans]
Length = 274
Score = 36.7 bits (83), Expect = 0.056
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
G D + I +S +G S AG+ GGT GG GGG G G G G GG GG GG
Sbjct: 37 GSDAGSGIGSSGGWGGSDASAGASAGGTGGGRGGGRGGSGG---GRGGGSGGGRGGSGGA 93
Query: 74 IAG 76
AG
Sbjct: 94 GAG 96
Score = 30.5 bits (67), Expect = 4.2
Identities = 19/41 (46%), Positives = 21/41 (50%), Gaps = 2/41 (4%)
Query: 38 WGGTRGGDGGGILGVGSIAQG--VGMVYGGIVGGIGGLIAG 76
WGG++GG GG GS QG G GG GG GG G
Sbjct: 160 WGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGG 200
>gi|125074|sp|P06394|K1CJ_BOVIN KERATIN, TYPE I CYTOSKELETAL VIB
(CYTOKERATIN VIB) >gi|71529|pir||KRBOVI keratin, 54K
type I cytoskeletal - bovine >gi|479|emb|CAA26626|
(X02870) cytokeratin VIb [Bos taurus]
Length = 526
Score = 36.7 bits (83), Expect = 0.056
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGI--GGLIAG 76
G + F GS G GG GGG G GS G G GG+ GG GGLI+G
Sbjct: 77 GYGSSFGGSYGGSFGGGYGGGGFGGGSF--GGGSFGGGLGGGFGDGGLISG 125
>gi|2388676 (AF015539) precollagen P [Mytilus edulis]
Length = 902
Score = 36.7 bits (83), Expect = 0.056
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 28 GVSAFFAGSIWGGTRGGDG-----GGILGVGSIAQGVGMVYGGIVGGIGG 72
G +A G +GG GG G GG G G + GVG GG+ GG+GG
Sbjct: 716 GANANAGGFPFGGAGGGPGAAGGPGGAGGPGGVGGGVGGGPGGVGGGVGG 765
Score = 32.5 bits (72), Expect = 1.1
Identities = 19/34 (55%), Positives = 20/34 (57%), Gaps = 3/34 (8%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GG GG GGG GVG GVG GG+ GG GG
Sbjct: 746 GGVGGGVGGGPGGVGG---GVGGGPGGVGGGPGG 776
Score = 30.1 bits (66), Expect = 5.5
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGI-VGGIGGLIAG 76
G + GG GG GG GVG GVG GG GG GG G
Sbjct: 746 GGVGGGVGGGPGGVGGGVGGGPGGVGGGPGGAGPGGAGGFGPG 788
Score = 29.7 bits (65), Expect = 7.2
Identities = 29/84 (34%), Positives = 37/84 (43%), Gaps = 6/84 (7%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGM--VYGGIV 67
+N GG A +S S F G +GG G GGI GS+ G+G GG +
Sbjct: 106 HNGLGGGSAHAHSSSSANAHSGGFGG--FGGI--GGIGGIGPGGSVGGGIGPGGSVGGGI 161
Query: 68 GGIGGLIAGFVLDKNVTYNYAVGF 91
GGIGG+ G N + GF
Sbjct: 162 GGIGGIGGGGGPGGNGGIGFGPGF 185
>gi|1469223|emb|CAA99171| (Z74892) glycine-rich protein [Brassica
oleracea]
Length = 220
Score = 36.7 bits (83), Expect = 0.056
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G GG GG GGG+ G G + G G GG+ GG GG G
Sbjct: 46 GGFGGGAGGGKGGGLGGGGGVGGGHG---GGVGGGFGGGAGG 84
Score = 35.2 bits (79), Expect = 0.16
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GV F G GG GG GGG G +G G+ GG GG+GG G
Sbjct: 73 GVGGGFGGGAGGGKGGGVGGGFGGGAGGGKGGGL-GGGHGGGVGGGFGG 120
Score = 34.4 bits (77), Expect = 0.28
Identities = 22/52 (42%), Positives = 25/52 (47%), Gaps = 2/52 (3%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG--IGGLIAGF 77
G F G GG GG GGG G +G G+ GG VGG GG+ GF
Sbjct: 27 GAGGGFGGGAGGGHGGGAGGGFGGGAGGGKGGGLGGGGGVGGGHGGGVGGGF 78
Score = 32.5 bits (72), Expect = 1.1
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GGG G G G GG GG GG AG
Sbjct: 153 GAGGGFGGGAGGGHGGGAGGGFGGGAGGGHG-GGAGGGFGGGAGGGHAG 200
Score = 32.5 bits (72), Expect = 1.1
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGI-LGVGSIAQGVGMVYGGIVGGIGG 72
G F G GG GG GGG G G G G GG GG GG
Sbjct: 169 GAGGGFGGGAGGGHGGGAGGGFGGGAGGGHAGGGGAGGGFGGGAGG 214
Score = 31.3 bits (69), Expect = 2.4
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G F G GG GG GGG G G G GG GG GG
Sbjct: 137 GAGGGFGGGAGGGHGGGAGGGFGGGAGGGHG-GGAGGGFGGGAGG 180
Score = 30.9 bits (68), Expect = 3.2
Identities = 22/52 (42%), Positives = 23/52 (43%), Gaps = 3/52 (5%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGV--GSIAQGVGMVYGGIVGG-IGGLIAG 76
GV F G GG GG GGG G G G G +GG GG GG G
Sbjct: 113 GVGGGFGGGAGGGKGGGVGGGHGGGAGGGFGGGAGGGHGGGAGGGFGGGAGG 164
Score = 30.9 bits (68), Expect = 3.2
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GV G + GG GG GGG G + G G GG GG GG + G
Sbjct: 65 GVGGGHGGGVGGGFGGGAGGG--KGGGVGGGFG---GGAGGGKGGGLGG 108
Score = 30.9 bits (68), Expect = 3.2
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G + GG GG GGG G +G G V GG GG GG
Sbjct: 64 GGVGGGHGGGVGGGFGGGAGGGKGGG-VGGGFGGGAGG 100
Score = 30.9 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G G GG GG GGG G G G G +GG GG GG
Sbjct: 177 GAGGGHGGGAGGGFGGGAGGGHAGGG----GAGGGFGGGAGGGGG 217
Score = 30.5 bits (67), Expect = 4.2
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+GG + G G + GG GG GGG G +G G V GG GG GG
Sbjct: 82 AGGGKGGGVGGGFGGGAGGGKGGGLGGGHGGGVGGGFGGGAGGGKG-GGVGGGHGGGAGG 140
Query: 73 LIAG 76
G
Sbjct: 141 GFGG 144
Score = 30.1 bits (66), Expect = 5.5
Identities = 19/49 (38%), Positives = 20/49 (40%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GG G G+ G GG GG GG G
Sbjct: 2 GAGGGFGGGAGGGHAGGGAGGGHGGGAGGGFGGGAGGGHGGGAGGGFGG 50
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/38 (44%), Positives = 18/38 (46%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GG GG GGG G G+ G GG GG GG
Sbjct: 1 GGAGGGFGGGAGGGHAGGGAGGGHGGGAGGGFGGGAGG 38
Score = 29.7 bits (65), Expect = 7.2
Identities = 18/45 (40%), Positives = 19/45 (42%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G AG GG GG GG G G+ G GG GG GG
Sbjct: 10 GAGGGHAGGGAGGGHGGGAGGGFGGGAGGGHGGGAGGGFGGGAGG 54
>gi|1255113|gb|AAC56432.1| (U50550) glycoprotein B [rat
cytomegalovirus Maastricht]
Length = 914
Score = 36.7 bits (83), Expect = 0.056
Identities = 12/28 (42%), Positives = 21/28 (74%)
Query: 51 GVGSIAQGVGMVYGGIVGGIGGLIAGFV 78
G+G+ +G+GMV+G + G +G + +GFV
Sbjct: 735 GLGAAGKGIGMVFGAVAGAVGSIASGFV 762
>gi|71528|pir||KRHU0 keratin 10, type I, cytoskeletal (clone
lambda-KH10-5) - human >gi|28317|emb|CAA32649| (X14487)
unnamed protein product [Homo sapiens]
Length = 593
Score = 36.4 bits (82), Expect = 0.073
Identities = 24/56 (42%), Positives = 30/56 (52%), Gaps = 6/56 (10%)
Query: 27 FGVSAF---FAGSIWGGTRGGD--GGGILGVGSIAQG-VGMVYGGIVGGIGGLIAG 76
+G S+F + GS GG GG GGG G G G G +GG GG GGL++G
Sbjct: 89 YGSSSFGGSYGGSFGGGNFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSG 144
Score = 29.7 bits (65), Expect = 7.2
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGT--RGGDGGGILGVGSIAQGVGMVYGGIVGGIG 71
GG + RI +S F +G GG+ RG GGG G G YGG+ G G
Sbjct: 29 GGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFG------GSSGGYGGLGGFGG 82
Query: 72 GLIAGFVLDKNVTYNYAVGFYNSLFNG 98
G G + +Y F F G
Sbjct: 83 GSFHGSYGSSSFGGSYGGSFGGGNFGG 109
Score = 29.7 bits (65), Expect = 7.2
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 35 GSIWGGTRGGD------GGGILGVGSIAQGVGMVYGGIVGG 69
GS GG RGG GGG G GS G G +GG GG
Sbjct: 457 GSSGGGGRGGGSFGGGYGGGSSGGGSSGGGYGGGHGGSSGG 497
>gi|547749|sp|P13645|K1CJ_HUMAN KERATIN, TYPE I CYTOSKELETAL 10
(CYTOKERATIN 10) (K10) (CK 10)
Length = 593
Score = 36.4 bits (82), Expect = 0.073
Identities = 24/56 (42%), Positives = 30/56 (52%), Gaps = 6/56 (10%)
Query: 27 FGVSAF---FAGSIWGGTRGGD--GGGILGVGSIAQG-VGMVYGGIVGGIGGLIAG 76
+G S+F + GS GG GG GGG G G G G +GG GG GGL++G
Sbjct: 89 YGSSSFGGSYGGSFGGGNFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSG 144
Score = 29.7 bits (65), Expect = 7.2
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGT--RGGDGGGILGVGSIAQGVGMVYGGIVGGIG 71
GG + RI +S F +G GG+ RG GGG G G YGG+ G G
Sbjct: 29 GGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFG------GSSGGYGGLGGFGG 82
Query: 72 GLIAGFVLDKNVTYNYAVGFYNSLFNG 98
G G + +Y F F G
Sbjct: 83 GSFHGSYGSSSFGGSYGGSFGGGNFGG 109
Score = 29.7 bits (65), Expect = 7.2
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 35 GSIWGGTRGGD------GGGILGVGSIAQGVGMVYGGIVGG 69
GS GG RGG GGG G GS G G +GG GG
Sbjct: 457 GSSGGGGRGGGSFGGGYGGGSSGGGSSGGGYGGGHGGSSGG 497
>gi|3513512 (AF043944) nongradient byssal precursor [Mytilus edulis]
Length = 904
Score = 36.4 bits (82), Expect = 0.073
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 28 GVSAFFAGSIWGGT--RGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G A AG GG GG+GGG G G G+G +GG+ GG+GGL G
Sbjct: 740 GGGAGGAGGNGGGAGGAGGNGGGAGGAG----GIGGGFGGLGGGLGGLGGG 786
Score = 34.8 bits (78), Expect = 0.22
Identities = 20/49 (40%), Positives = 25/49 (50%), Gaps = 3/49 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G SA + GG GGG G+G G+G GG+ GG+GGL G
Sbjct: 100 GASAAARAAAAASALGGGGGGFGGLGG---GLGGGLGGVGGGLGGLGGG 145
Score = 34.0 bits (76), Expect = 0.37
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G +GG GG GGG+ GVG G+G GG GG+GG
Sbjct: 118 GGGFGGLGGGLGGGLGGVGGGLGGLGGGLGG--GGLGG 153
Score = 33.2 bits (74), Expect = 0.63
Identities = 19/39 (48%), Positives = 22/39 (55%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
A S GG GG GG G+G GVG GG+ GG+GG
Sbjct: 110 AASALGGGGGGFGGLGGGLGGGLGGVGGGLGGLGGGLGG 148
Score = 32.8 bits (73), Expect = 0.83
Identities = 20/49 (40%), Positives = 26/49 (52%), Gaps = 12/49 (24%)
Query: 39 GGTRGGDGGGI-----------LGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG GG GGG+ LG G + G G+ GG+ GG+GGL+ G
Sbjct: 129 GGGLGGVGGGLGGLGGGLGGGGLGGGGLGGG-GLGGGGLGGGLGGLLGG 176
Score = 32.5 bits (72), Expect = 1.1
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 40 GTRGGDGGGILGVGSIAQGVGMV--YGGIVGGIGGLIAGF 77
G GG+GGG G G G G GG GG GG+ GF
Sbjct: 734 GGNGGNGGGAGGAGGNGGGAGGAGGNGGGAGGAGGIGGGF 773
Score = 32.1 bits (71), Expect = 1.4
Identities = 22/46 (47%), Positives = 27/46 (57%), Gaps = 6/46 (13%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
G A AG I GG GG GGG+ G+G A G+G +GG+GGL
Sbjct: 760 GGGAGGAGGIGGGF-GGLGGGLGGLGGGAGGLGG-----LGGLGGL 799
Score = 31.7 bits (70), Expect = 1.9
Identities = 20/41 (48%), Positives = 24/41 (57%), Gaps = 3/41 (7%)
Query: 35 GSIWGGTRGGDG--GGILGVGSIAQGVGMVYGGIVGGIGGL 73
G + GG GG G GG LG G + G+G + GG GG GGL
Sbjct: 144 GGLGGGGLGGGGLGGGGLGGGGLGGGLGGLLGG-GGGGGGL 183
>gi|2738441 (AF003534) hypothetical protein 084L [Chilo iridescent
virus]
Length = 475
Score = 36.4 bits (82), Expect = 0.073
Identities = 23/72 (31%), Positives = 34/72 (46%), Gaps = 6/72 (8%)
Query: 6 SIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVG--MVY 63
+I + ++GG + S+ G G+I GT G GG L G++ G G +
Sbjct: 156 AINSSQIAGGPFLSSSPGSVTGGPG----GNIAAGTVTGGSGGDLAAGTVTGGAGGNIAA 211
Query: 64 GGIVGGIGGLIA 75
G + GG GG IA
Sbjct: 212 GTVTGGAGGNIA 223
>gi|6041851|gb|AAF02160.1|AC009853_20 (AC009853) unknown protein
[Arabidopsis thaliana]
Length = 304
Score = 36.0 bits (81), Expect = 0.096
Identities = 22/57 (38%), Positives = 31/57 (53%), Gaps = 8/57 (14%)
Query: 24 SIVFGVSAFFAGSIWGGT---RGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
S + G + + G ++GG+ RGG GGG L S GM GG +GG GG + G+
Sbjct: 105 SALGGYGSSYGGGMYGGSSMYRGGYGGGGLYGSS-----GMYGGGAMGGYGGTMGGY 156
Score = 30.1 bits (66), Expect = 5.5
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 26 VFGVSAFFAGSIWGGTRGGDGGGILGVGS-IAQGVGMVYGGIVG 68
++G S + G GG G GG +G+G+ + G+GM GG G
Sbjct: 134 LYGSSGMYGGGAMGGYGGTMGGYGMGMGTGMGMGMGMGMGGPYG 177
>gi|2914704|gb|AAC04494.1| (AC003974) unknown protein [Arabidopsis
thaliana]
Length = 201
Score = 35.6 bits (80), Expect = 0.13
Identities = 18/35 (51%), Positives = 21/35 (59%), Gaps = 1/35 (2%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVY-GGIVGGIGG 72
GG GG GGG+ G G + G G Y GG GG+GG
Sbjct: 121 GGLGGGGGGGLGGGGGLGGGAGGGYGGGAGGGLGG 155
Score = 34.8 bits (78), Expect = 0.22
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
F + GG G GGG+ G G + G G+ GG +GG GGL G
Sbjct: 59 FGKGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 102
Score = 34.4 bits (77), Expect = 0.28
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
FG G + GG G GGG+ G G + G G+ GG +GG GL G
Sbjct: 59 FGKGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGSGLGGG 108
Score = 33.6 bits (75), Expect = 0.48
Identities = 18/42 (42%), Positives = 23/42 (53%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG G GGG+ G G + G G+ GG +GG GL G
Sbjct: 79 GGLGGGGGLGGGGGLGGGGGLGGGSGLGGGGGLGGGSGLGGG 120
Score = 33.2 bits (74), Expect = 0.63
Identities = 20/43 (46%), Positives = 21/43 (48%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G GG GG GGG+ G G I G G GG G GG GF
Sbjct: 139 GGAGGGYGGGAGGGLGGGGGIGGGGGFGGGGGGGFGGGAGGGF 181
Score = 33.2 bits (74), Expect = 0.63
Identities = 18/42 (42%), Positives = 23/42 (53%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG G GGG+ G G + G G+ G +GG GGL G
Sbjct: 73 GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGSGLGGGGGLGGG 114
Score = 32.8 bits (73), Expect = 0.83
Identities = 18/40 (45%), Positives = 21/40 (52%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFV 78
GG GG G G G G G G +G +GG GGL G+V
Sbjct: 157 GGIGGGGGFGGGGGGGFGGGAGGGFGKGIGGGGGLGGGYV 196
Score = 31.3 bits (69), Expect = 2.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G + GG G G G+ G G + G G+ GG +GG GG
Sbjct: 91 GGLGGGGGLGGGSGLGGGGGLGGGSGLGGGGGLGGGGG 128
Score = 31.3 bits (69), Expect = 2.4
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G + GG+ G GGG LG GS G G + GG GG+GG
Sbjct: 97 GGLGGGSGLGGGGG-LGGGSGLGGGGGLGGGGGGGLGG 133
Score = 30.9 bits (68), Expect = 3.2
Identities = 17/42 (40%), Positives = 22/42 (51%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG G GGG+ G + G G+ G +GG GGL G
Sbjct: 85 GGLGGGGGLGGGGGLGGGSGLGGGGGLGGGSGLGGGGGLGGG 126
Score = 30.5 bits (67), Expect = 4.2
Identities = 18/42 (42%), Positives = 22/42 (51%), Gaps = 3/42 (7%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG+ G GGG+ G G G G GG+ GG GG G
Sbjct: 109 GGLGGGSGLGGGGGLGGGGGGGLGGG---GGLGGGAGGGYGG 147
Score = 30.1 bits (66), Expect = 5.5
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 35 GSIWGGTRGGDGGGI---LGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG GG GGG LG G G G GG GG GG G
Sbjct: 135 GGLGGGAGGGYGGGAGGGLGGGGGIGGGGGFGGGGGGGFGGGAGG 179
>gi|3892586|emb|CAA28996| (X05421) keratin type II [Homo sapiens]
Length = 233
Score = 35.6 bits (80), Expect = 0.13
Identities = 27/82 (32%), Positives = 39/82 (46%), Gaps = 6/82 (7%)
Query: 2 RELTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVG-SIAQGVG 60
R+L E + G+ + + S+V + + +GG GG GG LG G S G G
Sbjct: 107 RKLLEGEEYSRMSGECPSAVSISVVSSSTTSASAGGYGGGYGGGMGGGLGGGFSAGGGSG 166
Query: 61 MVY-----GGIVGGIGGLIAGF 77
+ + GGI GG GG +GF
Sbjct: 167 IGFGRGGGGGIGGGFGGGTSGF 188
>gi|421936|pir||S34666 glycine-rich protein - common tobacco
>gi|395147|emb|CAA52208| (X74106) glycine-rich protein
[Nicotiana tabacum]
Length = 271
Score = 35.6 bits (80), Expect = 0.13
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GGT GG GGG G G + G G GG GG+GG
Sbjct: 92 GGSGGGTYGGGGGGGHGGGGVGGGGG---GGYQGGVGG 126
Score = 35.6 bits (80), Expect = 0.13
Identities = 18/42 (42%), Positives = 22/42 (51%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG GG GG+ G G G G +GG+ GG GG G
Sbjct: 110 GGVGGGGGGGYQGGVGGGGQGGGGGGGTHGGVGGGYGGAGGG 151
Score = 34.4 bits (77), Expect = 0.28
Identities = 21/35 (60%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 39 GGTRGGDGGGILGVG-SIAQGVGMVYGGIVGGIGG 72
GG RGG GGG G G AQG G YGG GG GG
Sbjct: 180 GGVRGGGGGGQGGGGHGGAQGGGGGYGGRGGGGGG 214
Score = 33.6 bits (75), Expect = 0.48
Identities = 20/43 (46%), Positives = 22/43 (50%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
AG GG RGG G G G G+ +G G GG GG GG G
Sbjct: 220 AGGAQGGGRGGGGVGGGGGGAGGRGGGQGGGGGAGGSGGAGGG 262
Score = 32.8 bits (73), Expect = 0.83
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
+ G + GG +GG GGG GVG YGG GG GG + G
Sbjct: 120 YQGGVGGGGQGGGGGG-----GTHGGVGGGYGG-AGGGGGAVGG 157
Score = 32.5 bits (72), Expect = 1.1
Identities = 19/34 (55%), Positives = 19/34 (55%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GG RGG G G GVG G G V GG GG GG
Sbjct: 159 GGGRGGGGEGGGGVGGGGGGHGGVRGGGGGGQGG 192
Score = 32.1 bits (71), Expect = 1.4
Identities = 19/39 (48%), Positives = 22/39 (55%), Gaps = 1/39 (2%)
Query: 35 GSIWGGTRG-GDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G + GG G G GGG +G G +G G GG VGG GG
Sbjct: 139 GGVGGGYGGAGGGGGAVGGGGGGRGGGGEGGGGVGGGGG 177
Score = 30.9 bits (68), Expect = 3.2
Identities = 19/34 (55%), Positives = 20/34 (57%), Gaps = 3/34 (8%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GG GG GGG G G AQG G GG+ GG GG
Sbjct: 209 GGGGGGQGGG--GAGG-AQGGGRGGGGVGGGGGG 239
Score = 30.5 bits (67), Expect = 4.2
Identities = 18/34 (52%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GGT GG GGG G G G G GG GG GG
Sbjct: 135 GGTHGGVGGGYGGAG----GGGGAVGGGGGGRGG 164
Score = 30.1 bits (66), Expect = 5.5
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G+ GG GG GGG +G G G V GG GG GG
Sbjct: 97 GTYGGGGGGGHGGGGVGGGGGGGYQGGVGGGGQGGGGG 134
Score = 29.3 bits (64), Expect = 9.4
Identities = 18/37 (48%), Positives = 20/37 (53%), Gaps = 3/37 (8%)
Query: 39 GGTRGGDGGGILGVGSIAQGV---GMVYGGIVGGIGG 72
GG GG GGG G G GV G +GG+ GG GG
Sbjct: 152 GGAVGGGGGGRGGGGEGGGGVGGGGGGHGGVRGGGGG 188
Score = 29.3 bits (64), Expect = 9.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 41 TRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
TRG DG S+A G G+ + G G GGL
Sbjct: 51 TRGADGSLTPSTSSLAGGKGITHSGAGGSTGGL 83
>gi|125098|sp|P12035|K2C3_HUMAN KERATIN, TYPE II CYTOSKELETAL 3
(CYTOKERATIN 3) (K3) (CK3) (65 KD CYTOKERATIN)
Length = 629
Score = 35.6 bits (80), Expect = 0.13
Identities = 27/82 (32%), Positives = 39/82 (46%), Gaps = 6/82 (7%)
Query: 2 RELTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVG-SIAQGVG 60
R+L E + G+ + + S+V + + +GG GG GG LG G S G G
Sbjct: 503 RKLLEGEEYSRMSGECPSAVSISVVSSSTTSASAGGYGGGYGGGMGGGLGGGFSAGGGSG 562
Query: 61 MVY-----GGIVGGIGGLIAGF 77
+ + GGI GG GG +GF
Sbjct: 563 IGFGRGGGGGIGGGFGGGTSGF 584
Score = 32.1 bits (71), Expect = 1.4
Identities = 19/43 (44%), Positives = 22/43 (50%), Gaps = 1/43 (2%)
Query: 30 SAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
S FAG GG G GGG G +G+G +GG GG GG
Sbjct: 86 SCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGG-AGGFGG 127
>gi|2496543|sp|Q50615|YI18_MYCTU HYPOTHETICAL PE-PGRS FAMILY PROTEIN
RV1818C >gi|1483553|emb|CAB01461| (Z78020) PE_PGRS
[Mycobacterium tuberculosis]
Length = 498
Score = 35.6 bits (80), Expect = 0.13
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 12/74 (16%)
Query: 11 NVSGGDLATRIEASIVFGVSAF---------FAGSIWGGTRGGDG-GGILGVGSI--AQG 58
NV+GG ++FG F G+ GG G G GG+ GVG A G
Sbjct: 268 NVTGGAGGAGGNGGLLFGAGGVGGVGGDGVAFLGTAPGGPGGAGGAGGLFGVGGAGGAGG 327
Query: 59 VGMVYGGIVGGIGG 72
+G+V G GG GG
Sbjct: 328 IGLVGNGGAGGSGG 341
Score = 34.8 bits (78), Expect = 0.22
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYG-GIVGGIGGLIA 75
GG GG GGI G G G+++G G GG+GGL A
Sbjct: 202 GGRAGGGVGGIGGAGGAGGNGGLLFGAGGAGGVGGLAA 239
Score = 31.7 bits (70), Expect = 1.9
Identities = 19/39 (48%), Positives = 22/39 (55%), Gaps = 1/39 (2%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+G+ G GG GG + G G A G G GG VGGIGG
Sbjct: 177 SGTAGFGGAGGAGGLLYGAGG-AGGAGGRAGGGVGGIGG 214
Score = 31.3 bits (69), Expect = 2.4
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGG--GILGVGSIAQGVGMVYGGIVGGI 70
+GG+ + A G A G+ G GG+GG G+L A G G G GG+
Sbjct: 367 AGGNAGLLVGAGGAGGAGALGGGATGVGGAGGNGGTAGLLFGAGGAGGFGFGGAGGAGGL 426
Query: 71 GGLIAGFVLD 80
GG AG + D
Sbjct: 427 GGK-AGLIGD 435
Score = 30.9 bits (68), Expect = 3.2
Identities = 23/60 (38%), Positives = 27/60 (44%), Gaps = 2/60 (3%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+GG+ A GV A + GG GGDGG GVG A G G + GG GG
Sbjct: 218 AGGNGGLLFGAGGAGGVGGLAADAGDGGA-GGDGGLFFGVGG-AGGAGGTGTNVTGGAGG 275
Score = 30.5 bits (67), Expect = 4.2
Identities = 18/52 (34%), Positives = 21/52 (39%), Gaps = 1/52 (1%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG-GIVGGIGGLIAGFV 78
G + F GG G G G G G++YG G GG GG G V
Sbjct: 158 GAAGLFGNGGAGGAGGNVASGTAGFGGAGGAGGLLYGAGGAGGAGGRAGGGV 209
>gi|88053|pir||A29666 keratin, 65K type II cytoskeletal - human
Length = 629
Score = 35.6 bits (80), Expect = 0.13
Identities = 27/82 (32%), Positives = 39/82 (46%), Gaps = 6/82 (7%)
Query: 2 RELTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVG-SIAQGVG 60
R+L E + G+ + + S+V + + +GG GG GG LG G S G G
Sbjct: 503 RKLLEGEEYSRMSGECPSAVSISVVSSSTTSASAGGYGGGYGGGMGGGLGGGFSAGGGSG 562
Query: 61 MVY-----GGIVGGIGGLIAGF 77
+ + GGI GG GG +GF
Sbjct: 563 IGFGRGGGGGIGGGFGGGTSGF 584
Score = 32.1 bits (71), Expect = 1.4
Identities = 19/43 (44%), Positives = 22/43 (50%), Gaps = 1/43 (2%)
Query: 30 SAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
S FAG GG G GGG G +G+G +GG GG GG
Sbjct: 86 SCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGG-AGGFGG 127
>gi|211743 (M18633) elastin [Gallus gallus]
Length = 294
Score = 35.6 bits (80), Expect = 0.13
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG G GG GVG +A GV GG+V G+GGL+ G
Sbjct: 68 GGLAPGVGGLAPGVGGLAPGV----GGLVPGVGGLVPG 101
Score = 32.5 bits (72), Expect = 1.1
Identities = 18/38 (47%), Positives = 21/38 (54%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG G GG GVG + GV GG+V G+GGL G
Sbjct: 75 GGLAPGVGGLAPGVGGLVPGV----GGLVPGVGGLAPG 108
Score = 30.9 bits (68), Expect = 3.2
Identities = 25/61 (40%), Positives = 31/61 (49%), Gaps = 6/61 (9%)
Query: 35 GSIWGGTR-GGDGGGILGVGSIAQGVGMVYGGI----VGGIGGLIAGFVLDKNVTYNYAV 89
G I GG GG G G LG G + GVG+ G+ GG+GG + GF TY A+
Sbjct: 214 GGIPGGLGVGGLGVGGLGAGGLGAGVGVPGFGVSPIFPGGVGGQL-GFGGKPPKTYGGAL 272
Query: 90 G 90
G
Sbjct: 273 G 273
Score = 30.9 bits (68), Expect = 3.2
Identities = 16/35 (45%), Positives = 20/35 (56%), Gaps = 4/35 (11%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG G GG + GVG + GV GG+ G+GGL
Sbjct: 82 GGLAPGVGGLVPGVGGLVPGV----GGLAPGVGGL 112
Score = 29.7 bits (65), Expect = 7.2
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 43 GGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G G+ GVG I G+G+ GG+ G+GGL AG
Sbjct: 204 GVPGAGVRGVGGIPGGLGV--GGL--GVGGLGAG 233
>gi|2204081|dbj|BAA20466| (D86074) insoluble protein [Pinctada
fucata]
Length = 738
Score = 35.6 bits (80), Expect = 0.13
Identities = 20/44 (45%), Positives = 22/44 (49%), Gaps = 3/44 (6%)
Query: 30 SAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
+A A GG GG GGG L A G G GG GG+GGL
Sbjct: 461 AALAAAGAGGGLGGGGGGGALAAALAAAGAG---GGGFGGLGGL 501
Score = 33.6 bits (75), Expect = 0.48
Identities = 22/60 (36%), Positives = 29/60 (47%), Gaps = 3/60 (5%)
Query: 16 DLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQG---VGMVYGGIVGGIGG 72
DLA +++S SA + S GG GG+GGG G G G + G GG+GG
Sbjct: 415 DLAGLLKSSASASASASASASAGGGGGGGNGGGNGGGGGGGAGALAAALAAAGAGGGLGG 474
Score = 31.3 bits (69), Expect = 2.4
Identities = 20/52 (38%), Positives = 26/52 (49%), Gaps = 6/52 (11%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGI-----LGVGS-IAQGVGMVYGGIVGGIGGL 73
G+ A G GG GG G G G G+ + G+G GG +GG+GGL
Sbjct: 114 GMGAGAGGGAGGGAGGGAGAGAGAGAGAGAGAGLGLGLGGGLGGGLGGLGGL 165
>gi|6679637|ref|NP_031951.1|| elastin
>gi|1706636|sp|P54320|ELS_MOUSE ELASTIN PRECURSOR
(TROPOELASTIN) >gi|2144808|pir||EAMS elastin precursor -
mouse >gi|473274 (U08210) tropoelastin [Mus musculus]
Length = 860
Score = 35.2 bits (79), Expect = 0.16
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 18 ATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
A +A+ G G + GG G G +GVG + GVG+ GG+ GG+GG+
Sbjct: 119 AAAYKAAAKAGAGLGGVGGVPGGVGVGGVPGGVGVGGVPGGVGV--GGVPGGVGGI 172
Score = 29.7 bits (65), Expect = 7.2
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 43 GGDGGGILGVGSIAQGVGMVYGGIVGGIG 71
GG GG+ GVG I GVG+ GG+ GG+G
Sbjct: 546 GGVPGGV-GVGGIPGGVGV--GGVPGGVG 571
Score = 29.7 bits (65), Expect = 7.2
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Query: 28 GVSAFFAGSIWGGTRGGDG-GGI---LGVGSIAQGVGMVYGGIVGGIGGL 73
GV G GG GG G GG+ +GVG + GVG +GGIGGL
Sbjct: 134 GVGGVPGGVGVGGVPGGVGVGGVPGGVGVGGVPGGVGG-----IGGIGGL 178
>gi|71527|pir||KRMSE1 keratin, 59K type I cytoskeletal - mouse
Length = 569
Score = 35.2 bits (79), Expect = 0.16
Identities = 19/45 (42%), Positives = 23/45 (50%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G ++ GS GG+ GG GG G GS + G G G GG GG
Sbjct: 497 GGGSYGGGSSGGGSHGGSSGGGYGGGSSSGGAGGHGGSSGGGYGG 541
Score = 30.9 bits (68), Expect = 3.2
Identities = 27/73 (36%), Positives = 33/73 (44%), Gaps = 15/73 (20%)
Query: 16 DLATRIE------ASIVFGVSAFFAGSIWGGTRGGDGGGILGVGS------IAQGVGMVY 63
D+ TR+E S++ G + G GG RGG GGG G S + G G Y
Sbjct: 434 DIKTRLENEIQTYRSLLEGEGSSSGGG--GGRRGGSGGGSYGGSSGGGSYGGSSGGGGSY 491
Query: 64 GGIVGGIGGLIAG 76
GG GG GG G
Sbjct: 492 GGSSGG-GGSYGG 503
>gi|119110|sp|P03211|EBN1_EBV EBNA-1 NUCLEAR PROTEIN
>gi|73987|pir||QQBE31 probable nuclear antigen - human
herpesvirus 4 (strain B95-8) >gi|1334880|emb|CAA24816.1|
(V01555) BKRF1 encodes EBNA-1 protein, latent cycle
gene. [Human herpesvirus 4]
Length = 641
Score = 35.2 bits (79), Expect = 0.16
Identities = 21/49 (42%), Positives = 22/49 (44%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G A AG+ G GG GG G G G G GG GG GG AG
Sbjct: 97 GAGAGGAGAGGGAGAGGGAGGAGGAGGAGAGGGAGAGGGAGGAGGAGAG 145
Score = 31.7 bits (70), Expect = 1.9
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GGT G G G G G G G GG GG GG
Sbjct: 87 GGTGAGAGAGGAGAGGAGAGGGAGAGGGAGGAGG 120
Score = 31.7 bits (70), Expect = 1.9
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G AG GG G GG G G A G G GG GG GG AG
Sbjct: 153 GAGGAGAGGGAGGAGGAGAGGGAGAGGGAGGAGA--GGGAGGAGGAGAG 199
Score = 31.3 bits (69), Expect = 2.4
Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
AG GG G GG G G A G G GG GG GG AG
Sbjct: 132 AGGGAGGAGGAGAGGGAGAGGGAGGAGA--GGGAGGAGGAGAG 172
Score = 29.7 bits (65), Expect = 7.2
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
AG+ G G GGG G G G G GG GG GG AG
Sbjct: 175 AGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGG-AGGAGGAGAG 216
Score = 29.3 bits (64), Expect = 9.4
Identities = 16/38 (42%), Positives = 16/38 (42%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIG 71
AG G G GGG G G G G GG GG G
Sbjct: 121 AGGAGAGGGAGAGGGAGGAGGAGAGGGAGAGGGAGGAG 158
Score = 29.3 bits (64), Expect = 9.4
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGI-VGGIGGLIAG 76
G AG G GG GG G G+ G G GG GG GG AG
Sbjct: 249 GAGGAGAGGAGGAGAGGAGGAGAGGGAGGAGAGGGAGGAGAGGAGGAGAG 298
Score = 29.3 bits (64), Expect = 9.4
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 28 GVSAFFAGSIWG-GTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G AG G G GG GG G G+ G G G GG GG AG
Sbjct: 257 GAGGAGAGGAGGAGAGGGAGGAGAGGGAGGAGAGGAGGAGAGGAGGAGAG 306
Score = 29.3 bits (64), Expect = 9.4
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGG-GILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G AG G GG GG G G G G G G GG GG AG
Sbjct: 241 GAGGAGAGGAGGAGAGGAGGAGAGGAGGAGAGGGAGGAGAGGGAGGAGAG 290
>gi|3877954|emb|CAB04518.1| (Z81555) similar to ATP-dependent
helicase (DEAD box); cDNA EST yk436c8.5 comes from this
gene; cDNA EST EMBL:D35872 comes from this gene; cDNA
EST EMBL:D67566 comes from this gene; cDNA EST
EMBL:D73766 comes from this gene; ...
Length = 561
Score = 35.2 bits (79), Expect = 0.16
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGIL--GVGSIAQGVGMVYGGIVGGIGGLIAG 76
+G S + GS GG+RGG GGG G G + G G YGG GG GG G
Sbjct: 6 YGGSRSYGGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGG--GGGGGYGGG 55
Score = 31.3 bits (69), Expect = 2.4
Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 35 GSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGIGG 72
G GG RGG GGG G G G G YGG GG GG
Sbjct: 22 GGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGG--GGYGG 59
>gi|125069|sp|P02535|K1CJ_MOUSE KERATIN, TYPE I CYTOSKELETAL 10
(CYTOKERATIN 10) (56 KD CYTOKERATIN) (KERATIN, TYPE I
CYTOSKELETAL 59 KD) >gi|387397 (L00193) epidermal
keratin subunit I [Mus musculus]
Length = 570
Score = 35.2 bits (79), Expect = 0.16
Identities = 19/45 (42%), Positives = 23/45 (50%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G ++ GS GG+ GG GG G GS + G G G GG GG
Sbjct: 498 GGGSYGGGSSGGGSHGGSSGGGYGGGSSSGGAGGHGGSSGGGYGG 542
Score = 30.9 bits (68), Expect = 3.2
Identities = 27/73 (36%), Positives = 33/73 (44%), Gaps = 15/73 (20%)
Query: 16 DLATRIE------ASIVFGVSAFFAGSIWGGTRGGDGGGILGVGS------IAQGVGMVY 63
D+ TR+E S++ G + G GG RGG GGG G S + G G Y
Sbjct: 435 DIKTRLENEIQTYRSLLEGEGSSSGGG--GGRRGGSGGGSYGGSSGGGSYGGSSGGGGSY 492
Query: 64 GGIVGGIGGLIAG 76
GG GG GG G
Sbjct: 493 GGSSGG-GGSYGG 504
>gi|6680602|ref|NP_032495.1|| keratin complex 1, acidic, gene 15
>gi|3183049|sp|Q61414|K1CO_MOUSE KERATIN, TYPE I
CYTOSKELETAL 15 (CYTOKERATIN 15) (K15) (CK 15)
>gi|2119207|pir||I49595 cytokeratin 15 - mouse
>gi|904215|dbj|BAA03821| (D16313) cytokeratin 15 [Mus
musculus]
Length = 452
Score = 34.8 bits (78), Expect = 0.22
Identities = 24/63 (38%), Positives = 29/63 (45%), Gaps = 2/63 (3%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG + I AS VS+ G GG G GGG G G G +G GG GGL
Sbjct: 36 GGGGSRSISASSARFVSSGAGGGFGGGMSCGFGGGF--GGGFGGGFGGGFGDFGGGDGGL 93
Query: 74 IAG 76
++G
Sbjct: 94 LSG 96
>gi|1079080|pir||S49195 GCR 20 protein - fruit fly (Drosophila
melanogaster) >gi|510504|emb|CAA51651| (X73134) GCR 20
[Drosophila melanogaster]
Length = 127
Score = 34.8 bits (78), Expect = 0.22
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 38 WGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
+GG GG GGG G G G G +GG GG GG GF
Sbjct: 49 FGGGFGGPGGGFGGPGGGFGGQGGGFGGPGGGFGGQGGGF 88
Score = 32.8 bits (73), Expect = 0.83
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 16 DLATRIEASIVFGVSAFFAGSIWG--GTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
D+ ++A + + F G G G GG GGG G G G G +GG GG GG
Sbjct: 32 DVDAGVQAPVAARQARQFGGGFGGPGGGFGGPGGGFGGQGGGFGGPGGGFGGQGGGFGG 90
Score = 30.5 bits (67), Expect = 4.2
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 39 GGTRGGDGGGILGVGSIAQG-----VGMVYGGIVGGIGGLIAGF 77
GG GG GGG G G G G +GG GG GG GF
Sbjct: 78 GGGFGGQGGGFGGQGGFGGGGFGGRPGGGFGGPGGGFGGPGGGF 121
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GG GG GGG G G G G +GG GG GG
Sbjct: 64 GGGFGGQGGGFGGPGGGFGGQGGGFGG-QGGFGG 96
>gi|115613|sp|P04574|CANS_PIG CALCIUM-DEPENDENT PROTEASE, SMALL
SUBUNIT (CALPAIN REGULATORY SUBUNIT) (CALCIUM-ACTIVATED
NEUTRAL PROTEINASE) (CANP) >gi|67666|pir||CIPGL calpain
(EC 3.4.22.17) light chain - pig >gi|164403 (M11778)
calpain I light subunit (EC 3.4.22.17) [Sus scrofa]
>gi|164405 (M11779) pig calpain I light subunit (EC
3.4.22.17) [Sus scrofa]
Length = 266
Score = 34.8 bits (78), Expect = 0.22
Identities = 20/47 (42%), Positives = 27/47 (56%), Gaps = 9/47 (19%)
Query: 26 VFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+F V++F G GG GG GGG+ G G+G V GG++ G GG
Sbjct: 1 MFLVNSFLKG---GGGGGGGGGGLGG------GLGNVLGGLISGAGG 38
>gi|288246|emb|CAA37407.1| (X53320) keratin K13 [Mus musculus]
Length = 157
Score = 34.8 bits (78), Expect = 0.22
Identities = 21/49 (42%), Positives = 25/49 (50%), Gaps = 2/49 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G+S F G GG GG GGG GS G G +G G GGL++G
Sbjct: 48 GMSCGFGGGAGGGFGGGFGGGF--GGSYGGGFGGGFGDFGGVDGGLLSG 94
>gi|741022|prf||2006282A keratin 15 [Mus musculus]
Length = 452
Score = 34.8 bits (78), Expect = 0.22
Identities = 24/63 (38%), Positives = 29/63 (45%), Gaps = 2/63 (3%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG + I AS VS+ G GG G GGG G G G +G GG GGL
Sbjct: 36 GGGGSRSISASSARFVSSGAGGGFGGGMSCGFGGGF--GGGFGGGFGGGFGDFGGGDGGL 93
Query: 74 IAG 76
++G
Sbjct: 94 LSG 96
>gi|6754480|ref|NP_034792.1|| keratin complex 1, acidic, gene 13
>gi|1708588|sp|P08730|K1CM_MOUSE KERATIN, TYPE I
CYTOSKELETAL 13 (CYTOKERATIN 13) (K13) (CK 13) (47 KD
CYTOKERATIN) >gi|1072003|pir||A55682 keratin 13, type I
cytoskeletal - mouse >gi|541611 (U13921) cytokeratin 13
[Mus musculus]
Length = 437
Score = 34.8 bits (78), Expect = 0.22
Identities = 21/49 (42%), Positives = 25/49 (50%), Gaps = 2/49 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G+S F G GG GG GGG GS G G +G G GGL++G
Sbjct: 48 GMSCGFGGGAGGGFGGGFGGGF--GGSYGGGFGGGFGDFGGVDGGLLSG 94
>gi|125099|sp|P04265|K2C2_XENLA KERATIN, TYPE II CYTOSKELETAL I
(CLONE PUF164) >gi|71538|pir||KRXL2B keratin, 64K type
II cytoskeletal (clone pUF164) - African clawed frog
(fragment) >gi|64867|emb|CAA26654| (X02895) type II
cytokeratin [Xenopus laevis]
Length = 419
Score = 34.8 bits (78), Expect = 0.22
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 15 GDLATRIEASIVFGVSAFF------AGSIWGG--TRGGDGGGILGVGSIAQGVGMVYGGI 66
G ++ + S++ G S+ + AG + GG GG GGG+ G + G GM GG
Sbjct: 277 GQISNNVSISVISGGSSVYTALGGAAGGMGGGGGMGGGMGGGMGMGGGMGMGGGMGMGGG 336
Query: 67 VGGIGGLIAGFVLDKNVTYNYAVGFYNSLFNG 98
+G GG+ G + + +G + + +G
Sbjct: 337 MGMGGGMGGGMGMGGGMGMGGGMGMGDGMGSG 368
>gi|544426|sp|Q03878|GRP_DAUCA GLYCINE-RICH RNA-BINDING PROTEIN
>gi|100155|pir||S14857 glycine-rich protein - carrot
>gi|18347|emb|CAA41152| (X58146) glycine-rich protein
[Daucus carota] >gi|445138|prf||1908438A Gly-rich
protein [Daucus carota]
Length = 157
Score = 34.8 bits (78), Expect = 0.22
Identities = 20/45 (44%), Positives = 23/45 (50%), Gaps = 2/45 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G + G +GG R G GGG G G +G G YGG GG GG
Sbjct: 97 GGGGYGGGGGYGGRREGGGGG--GYGGRREGGGGGYGGGGGGYGG 139
>gi|1362077|pir||S57483 glycin-rich protein - cowpea (fragment)
>gi|871770|emb|CAA61200| (X87948) glycin-rich protein
[Vigna unguiculata]
Length = 408
Score = 34.8 bits (78), Expect = 0.22
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG---GIVGGIG 71
G F G GG GG GGG G I G G +G G+ GGIG
Sbjct: 30 GAGGGFGGGAGGGVGGGAGGGFGKGGGIGGGAGGGFGKGAGVGGGIG 76
Score = 34.0 bits (76), Expect = 0.37
Identities = 19/42 (45%), Positives = 21/42 (49%), Gaps = 3/42 (7%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G GG+ GG GGG G G G G GG GG+GG G
Sbjct: 11 GGFGGGSGGGFGGGAGGGGGAGGGFG---GGAGGGVGGGAGG 49
Score = 33.2 bits (74), Expect = 0.63
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 33 FAGSIWGGTRGGDGGGILG-VGSIAQGVGMVYGGIVGGIGGLIAG 76
F G GG GG GGG G G A G G GG GG GG + G
Sbjct: 1 FGGGGGGGAGGGFGGGSGGGFGGGAGGGGGAGGGFGGGAGGGVGG 45
Score = 32.8 bits (73), Expect = 0.83
Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
FG A G GG GG GGG+ G G G GGI GG GG
Sbjct: 21 FGGGAGGGGGAGGGFGGGAGGGVGGGAGGGFGKG---GGIGGGAGG 63
Score = 32.8 bits (73), Expect = 0.83
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G F G GG GG GGG G G G GG+ GG GG
Sbjct: 8 GAGGGFGGGSGGGFGGGAGGGGGAGGGFGGGAG---GGVGGGAGG 49
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/42 (40%), Positives = 21/42 (49%), Gaps = 2/42 (4%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG G GGG G + G+G GG +GG GG G
Sbjct: 175 GGVGGGIGKGGGGGFGKGGGVGGGIGK--GGGLGGGGGFGKG 214
Score = 30.1 bits (66), Expect = 5.5
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
FG A G I G G GGG G + G+G GG +GG GG G
Sbjct: 65 FGKGAGVGGGIGKGGGLGGGGGFGKGGGVGGGIGK--GGGLGGGGGFGKG 112
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/42 (40%), Positives = 21/42 (49%), Gaps = 2/42 (4%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG G GGG G + G+G GG +GG GG G
Sbjct: 215 GGVGGGIGKGGGGGFGKGGGVGGGIGK--GGGLGGGGGFGKG 254
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/42 (40%), Positives = 21/42 (49%), Gaps = 2/42 (4%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG G GGG G + G+G GG +GG GG G
Sbjct: 255 GGVGGGIGKGGGGGFGKGGGVGGGIGK--GGGLGGGGGFGKG 294
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/42 (40%), Positives = 21/42 (49%), Gaps = 2/42 (4%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G + GG G GGG G + G+G GG +GG GG G
Sbjct: 135 GGVGGGIGKGGGGGFGKGGGVGGGIGK--GGGLGGGGGFGKG 174
Score = 29.3 bits (64), Expect = 9.4
Identities = 18/42 (42%), Positives = 21/42 (49%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G I GG GG G G G I +G G+ GG G GG+ G
Sbjct: 55 GGIGGGAGGGFGKGAGVGGGIGKGGGLGGGGGFGKGGGVGGG 96
Score = 29.3 bits (64), Expect = 9.4
Identities = 24/63 (38%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG + I FG G I GG G GGG G G G G +GG GG GG
Sbjct: 338 GGGIGGGIGKGGGFGGGIGKGGGIGGGI--GKGGGFGGGGGFGGGGG--FGGGSGGGGGF 393
Query: 74 IAG 76
G
Sbjct: 394 GGG 396
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/35 (48%), Positives = 18/35 (50%), Gaps = 1/35 (2%)
Query: 43 GGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
GG GGG G G G G +GG GG GG GF
Sbjct: 2 GGGGGGGAG-GGFGGGSGGGFGGGAGGGGGAGGGF 35
>gi|2113981|emb|CAB08933| (Z95557) PE_PGRS [Mycobacterium
tuberculosis]
Length = 439
Score = 34.8 bits (78), Expect = 0.22
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG-GIVGGIG 71
+GG+ A + A I G S AG I G GG GG GS QG G++YG G GG G
Sbjct: 138 NGGNGAAGVNAGIAGG-SGGAAGLIGNGGSGGAGGAGAAGGSGGQG-GLLYGNGGAGGNG 195
Query: 72 G 72
G
Sbjct: 196 G 196
>gi|4502565|ref|NP_001740.1|| calpain, small polypeptide
>gi|115612|sp|P04632|CANS_HUMAN CALCIUM-DEPENDENT
PROTEASE, SMALL SUBUNIT (CALPAIN REGULATORY SUBUNIT)
(CALCIUM-ACTIVATED NEUTRAL PROTEINASE) (CANP)
>gi|67665|pir||CIHUL calpain (EC 3.4.22.17) light chain
- human >gi|35328|emb|CAA27726| (X04106) protease small
subunit (aa 1-268) [Homo sapiens] >gi|179909 (M31511)
neutral protease alpha subunit [Homo sapiens]
>gi|1905903 (AD001527) calcium-dependent protease,
small (regulatory) subunit (calpain) (calcium-activated
neutral proteinase) (CANP) [Homo sapiens] >gi|2443873
(AC002984) CANS_Human [Homo sapiens]
Length = 268
Score = 34.8 bits (78), Expect = 0.22
Identities = 20/47 (42%), Positives = 27/47 (56%), Gaps = 9/47 (19%)
Query: 26 VFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+F V++F G GG GG GGG+ G G+G V GG++ G GG
Sbjct: 1 MFLVNSFLKG---GGGGGGGGGGLGG------GLGNVLGGLISGAGG 38
>gi|4469001|emb|CAB10478.2| (Z97342) hypothetical protein
[Arabidopsis thaliana]
Length = 102
Score = 34.8 bits (78), Expect = 0.22
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 37 IWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
I GG G GGG +G+G G+G GG++G GG+I G
Sbjct: 35 IIGGEAMGIGGGAIGIGGGVMGMG---GGVIGIGGGVIIG 71
Score = 34.0 bits (76), Expect = 0.37
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 25 IVFGVSAFFAGSIWG--GTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
+V GV G G G G GGG++G+G G+G GG++ GIG + G
Sbjct: 28 LVDGVIGIIGGEAMGIGGGAIGIGGGVMGMGGGVIGIG---GGVIIGIGDITGG 78
>gi|4504911|ref|NP_002265.1|| keratin 13 >gi|280816|pir||A37343
keratin 13, type I, cytoskeletal, short form - human
>gi|30377|emb|CAA36673| (X52426) cytokeratin 13 [Homo
sapiens] >gi|3603253 (AF049259) keratin 13 [Homo
sapiens]
Length = 420
Score = 34.4 bits (77), Expect = 0.28
Identities = 23/53 (43%), Positives = 26/53 (48%), Gaps = 9/53 (16%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLD 80
GVS F G G GG GGG+ G G G GG+ GG GG AG +D
Sbjct: 48 GVSCGFGGGAGSGFGGGYGGGLGG------GYG---GGLGGGFGGGFAGGFVD 91
Score = 33.2 bits (74), Expect = 0.63
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGI-LGVGSIA-QGVGMVYGGIVGG--IGGLIAGF 77
GVS + GG+ GG GGG+ G G A G G YGG +GG GGL GF
Sbjct: 28 GVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGF 81
Score = 29.3 bits (64), Expect = 9.4
Identities = 23/71 (32%), Positives = 27/71 (37%), Gaps = 16/71 (22%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGI-- 70
S G + G + F G GG GG GGG+ G G G GG GG
Sbjct: 41 SAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGG------GFG---GGFAGGFVD 91
Query: 71 -----GGLIAG 76
GGL+ G
Sbjct: 92 FGACDGGLLTG 102
>gi|81627|pir||JQ1064 glycine-rich protein 5 - Arabidopsis thaliana
>gi|259451|bbs|117616 (S47414) glycine-rich protein,
atGRP {clone atGRP-5} [Arabidopsis thaliana, C24,
Peptide Partial, 173 aa] [Arabidopsis thaliana]
Length = 173
Score = 34.4 bits (77), Expect = 0.28
Identities = 19/45 (42%), Positives = 21/45 (46%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G F G GG+ GG GGG G + G G GG GG GG
Sbjct: 107 GAGGGFGGGAGGGSGGGFGGGAGAGGGLGGGGGAGGGGGFGGGGG 151
Score = 32.8 bits (73), Expect = 0.83
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
FG A G + GG G GGG G G G+G +GG G GG G
Sbjct: 124 FGGGAGAGGGLGGGGGAGGGGGFGGGG--GSGIGGGFGGGAGAGGGFGGG 171
Score = 32.5 bits (72), Expect = 1.1
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G I GG+ G GGG G G + G G GG+ GG GG G
Sbjct: 50 GGIGGGSGLGGGGGFGGGGGLGGGAG-GGGGLGGGAGGGAGG 90
Score = 31.7 bits (70), Expect = 1.9
Identities = 18/38 (47%), Positives = 19/38 (49%), Gaps = 1/38 (2%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GG GG GGG G G + G G GG GG GG
Sbjct: 82 GGAGGGAGGGFGGGAGGGGGLGGG-GGAGGGFGGGAGG 118
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G F G GG GG GG LG G G G +GG GG GGL G
Sbjct: 60 GGGGFGGGGGLGGGAGGGGG--LG-GGAGGGAGGGFGGGAGGGGGLGGG 105
Score = 29.7 bits (65), Expect = 7.2
Identities = 18/43 (41%), Positives = 22/43 (50%), Gaps = 2/43 (4%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
+G + GG G G G+ G G G G+ GG GG GGL G
Sbjct: 43 SGGLGGGGGIGGGSGLGGGGGFGGGGGL--GGGAGGGGGLGGG 83
Score = 29.7 bits (65), Expect = 7.2
Identities = 19/50 (38%), Positives = 19/50 (38%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G F G G G GGG G G G G GG GG G GF
Sbjct: 119 GSGGGFGGGAGAGGGLGGGGGAGGGGGFGGGGGSGIGGGFGGGAGAGGGF 168
Score = 29.3 bits (64), Expect = 9.4
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G A G + GG GG GGG G G GG +GG GG GF
Sbjct: 71 GGGAGGGGGLGGGAGGGAGGGF--------GGGAGGGGGLGGGGGAGGGF 112
>gi|6678645|ref|NP_032501.1|| keratin complex 2, basic, gene 4
>gi|125101|sp|P07744|K2C4_MOUSE KERATIN, TYPE II
CYTOSKELETAL 4 (CYTOKERATIN 4) (CYTOSKELETAL 57 KD
KERATIN) >gi|91010|pir||A23518 keratin, 57K type II
cytoskeletal - mouse >gi|52785|emb|CAA27207| (X03491) 57
kd keratin (aa 1-524) [Mus musculus]
Length = 524
Score = 34.4 bits (77), Expect = 0.28
Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 29 VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
+S AGS GG GG GG GVG G G GG GG GG G
Sbjct: 61 ISMSVAGSCQGGGYGGAGG--FGVGGYGAGFGA--GGFGGGFGGSFNG 104
>gi|1658179 (U74325) glycine-rich protein [Nicotiana tabacum]
Length = 129
Score = 34.4 bits (77), Expect = 0.28
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
FGV F + GG GGI + G G +G +GG GG +G
Sbjct: 44 FGVGPGFGSGVGGGFGNNPFGGISSGSGLGFGAGTGFGSSIGGAGGFGSG 93
>gi|1945663|emb|CAB08033| (Z94043) hypothetical protein [Bacillus
subtilis] >gi|2635977|emb|CAB15469| (Z99121) similar to
hypothetical proteins [Bacillus subtilis]
Length = 191
Score = 34.4 bits (77), Expect = 0.28
Identities = 27/68 (39%), Positives = 35/68 (50%), Gaps = 5/68 (7%)
Query: 33 FAGSIWGGTRGGDGGGI-LGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGF 91
FAGS GG LGV QG+G+VYGG G+ G IA +++ T A+G
Sbjct: 7 FAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGT---AIGV 63
Query: 92 YNS-LFNG 98
S LF+G
Sbjct: 64 MPSGLFSG 71
>gi|2924451|emb|CAA17751| (AL022022) PE_PGRS [Mycobacterium
tuberculosis]
Length = 1489
Score = 34.4 bits (77), Expect = 0.28
Identities = 25/47 (53%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 34 AGSIWGGT--RGGDGGGILGVGSIAQGVGMVYGGI--VGGIGGLIAG 76
AG GGT GG GG + GVG A GVG GG GG GGLI G
Sbjct: 168 AGGSGGGTGGAGGAGGWLFGVGG-AGGVGGAGGGTGGAGGPGGLIWG 213
Score = 30.9 bits (68), Expect = 3.2
Identities = 23/49 (46%), Positives = 26/49 (52%), Gaps = 3/49 (6%)
Query: 26 VFGVS-AFFAGSIWGGTRGGDG-GGILGVGSIAQGVGMVYGGIVGGIGG 72
+FGV A G GGT G G GG++ G A GVG GG GG GG
Sbjct: 185 LFGVGGAGGVGGAGGGTGGAGGPGGLIWGGGGAGGVGGAGGG-TGGAGG 232
>gi|6016411|sp|P13646|K1CM_HUMAN KERATIN, TYPE I CYTOSKELETAL 13
(CYTOKERATIN 13) (K13) (CK 13)
Length = 458
Score = 34.4 bits (77), Expect = 0.28
Identities = 23/53 (43%), Positives = 26/53 (48%), Gaps = 9/53 (16%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLD 80
GVS F G G GG GGG+ G G G GG+ GG GG AG +D
Sbjct: 48 GVSCGFGGGAGSGFGGGYGGGLGG------GYG---GGLGGGFGGGFAGGFVD 91
Score = 33.2 bits (74), Expect = 0.63
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGI-LGVGSIA-QGVGMVYGGIVGG--IGGLIAGF 77
GVS + GG+ GG GGG+ G G A G G YGG +GG GGL GF
Sbjct: 28 GVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGF 81
Score = 29.3 bits (64), Expect = 9.4
Identities = 23/71 (32%), Positives = 27/71 (37%), Gaps = 16/71 (22%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGI-- 70
S G + G + F G GG GG GGG+ G G G GG GG
Sbjct: 41 SAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGG------GFG---GGFAGGFVD 91
Query: 71 -----GGLIAG 76
GGL+ G
Sbjct: 92 FGACDGGLLTG 102
>gi|3775995|emb|CAA09200| (AJ010461) RNA helicase [Arabidopsis
thaliana]
Length = 363
Score = 34.0 bits (76), Expect = 0.37
Identities = 24/55 (43%), Positives = 25/55 (44%), Gaps = 2/55 (3%)
Query: 20 RIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMV--YGGIVGGIGG 72
R AS+ GV A GS GG GG G G G S G G YGG G GG
Sbjct: 246 RGSASMFEGVGARSGGSFGGGRSGGGGYGSYGSSSGRSGGGSYGGYGGSSGRSGG 300
>gi|2739483 (AF026845) abductin [Argopecten irradians]
Length = 136
Score = 34.0 bits (76), Expect = 0.37
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 28 GVSAFFAGSIWGGTRGGDGG--GILGVGSIAQGVGMVYGGI--VGGIGGLIAG 76
G++A G + GG GG GG GI G G + G+G GG +GG GG+ G
Sbjct: 36 GMNAGGFGGMGGGMGGGKGGFGGIGGFGGMGGGMGGGPGGFGGMGGFGGMGGG 88
Score = 31.7 bits (70), Expect = 1.9
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 38 WGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
+GG GG GGG G G I +GG+ GG+GG GF
Sbjct: 42 FGGMGGGMGGGKGGFGGIGG-----FGGMGGGMGGGPGGF 76
Score = 31.3 bits (69), Expect = 2.4
Identities = 24/59 (40%), Positives = 31/59 (51%), Gaps = 5/59 (8%)
Query: 21 IEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL--IAGF 77
+ A ++ VSA G G+ GG GG +G G A G G + GG+ GG GG I GF
Sbjct: 7 LAACLIAAVSAAGYGG-GAGSMGGTGG--MGGGMNAGGFGGMGGGMGGGKGGFGGIGGF 62
Score = 30.9 bits (68), Expect = 3.2
Identities = 21/47 (44%), Positives = 24/47 (50%), Gaps = 2/47 (4%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIV--GGIGGLIAGF 77
F G G GG GG G+GS G G + GG GG+GG AGF
Sbjct: 76 FGGMGGFGGMGGGKGGFGGMGSGMGGFGGMGGGNAGFGGMGGGNAGF 122
Score = 29.7 bits (65), Expect = 7.2
Identities = 22/47 (46%), Positives = 28/47 (58%), Gaps = 6/47 (12%)
Query: 34 AGSIWGGTRGGDGGGIL--GVGSIAQGVGMVYGGI--VGGIGGLIAG 76
AGS+ GGT GG GGG+ G G + G+G GG +GG GG+ G
Sbjct: 24 AGSM-GGT-GGMGGGMNAGGFGGMGGGMGGGKGGFGGIGGFGGMGGG 68
>gi|4557705|ref|NP_000217.1|| keratin 9
>gi|547748|sp|P35527|K1CI_HUMAN KERATIN, TYPE I
CYTOSKELETAL 9 (CYTOKERATIN 9) (K9) (CK 9)
>gi|2119236|pir||I37984 keratin 9 - human
>gi|453155|emb|CAA52924| (X75015) keratin 9 [Homo
sapiens] >gi|545257|bbs|146074 (S69510) cytokeratin 9,
CK 9=type I cytokeratin [human, foot sole epidermis,
Peptide, 622 aa] [Homo sapiens]
Length = 622
Score = 34.0 bits (76), Expect = 0.37
Identities = 20/48 (41%), Positives = 25/48 (51%), Gaps = 3/48 (6%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLI 74
+ S F G GG+ GG GGG GS G+G GG GG GG++
Sbjct: 104 YSSSGGFGGGFGGGSGGGFGGGY---GSGFGGLGGFGGGAGGGDGGIL 148
Score = 30.9 bits (68), Expect = 3.2
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGG--TRGGDGGGILGVGSIAQGVGMVYGGIVGGI 70
SGG + G S F G+ GG + GG GGG G GS G G YG GG+
Sbjct: 76 SGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGF-GGGS-GGGFGGGYGSGFGGL 133
Query: 71 GGLIAG 76
GG G
Sbjct: 134 GGFGGG 139
Score = 30.5 bits (67), Expect = 4.2
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGIG 71
GG +R + +G + G GG GG GGG G G + G G YGG G G
Sbjct: 506 GGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGG 565
Query: 72 GLIAGF 77
G G+
Sbjct: 566 GSGGGY 571
Score = 29.3 bits (64), Expect = 9.4
Identities = 18/44 (40%), Positives = 21/44 (46%), Gaps = 2/44 (4%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
+G +GG GG GGG G G G YGG G GG G+
Sbjct: 492 SGGSYGG--GGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGY 533
>gi|1082558|pir||S41161 keratin 9, cytoskeletal - human
>gi|435476|emb|CAA82315| (Z29074) cytokeratin 9 [Homo
sapiens]
Length = 623
Score = 34.0 bits (76), Expect = 0.37
Identities = 20/48 (41%), Positives = 25/48 (51%), Gaps = 3/48 (6%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLI 74
+ S F G GG+ GG GGG GS G+G GG GG GG++
Sbjct: 105 YSSSGGFGGGFGGGSGGGFGGGY---GSGFGGLGGFGGGAGGGDGGIL 149
Score = 30.9 bits (68), Expect = 3.2
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGG--TRGGDGGGILGVGSIAQGVGMVYGGIVGGI 70
SGG + G S F G+ GG + GG GGG G GS G G YG GG+
Sbjct: 77 SGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGF-GGGS-GGGFGGGYGSGFGGL 134
Query: 71 GGLIAG 76
GG G
Sbjct: 135 GGFGGG 140
Score = 30.5 bits (67), Expect = 4.2
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILG--VGSIAQGVGMVYGGIVGGIG 71
GG +R + +G + G GG GG GGG G G + G G YGG G G
Sbjct: 507 GGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGG 566
Query: 72 GLIAGF 77
G G+
Sbjct: 567 GSGGGY 572
Score = 29.3 bits (64), Expect = 9.4
Identities = 18/44 (40%), Positives = 21/44 (46%), Gaps = 2/44 (4%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
+G +GG GG GGG G G G YGG G GG G+
Sbjct: 493 SGGSYGG--GGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGY 534
>gi|125097|sp|P04266|K2C1_XENLA KERATIN, TYPE II CYTOSKELETAL I
(CLONE PUF23) >gi|71539|pir||KRXL2A keratin, 64K type II
cytoskeletal (clone pUF23) - African clawed frog
(fragment) >gi|899427|emb|CAA26653| (X02894) type II
cytokeratin [Xenopus laevis]
Length = 425
Score = 34.0 bits (76), Expect = 0.37
Identities = 23/65 (35%), Positives = 34/65 (51%), Gaps = 8/65 (12%)
Query: 15 GDLATRIEASIVFGVSAFFA--GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVG---- 68
G + ++ S++ G S+ + G GG GG GGG +G G GMV+GG +G
Sbjct: 298 GQIVNKVSISVLSGGSSVYTALGGAAGGM-GGGGGGGMGSGHGGGYGGMVFGGGMGCGMG 356
Query: 69 -GIGG 72
G+GG
Sbjct: 357 DGMGG 361
>gi|775215 (U23857) EBNA1 [Herpesvirus papio]
Length = 476
Score = 34.0 bits (76), Expect = 0.37
Identities = 19/38 (50%), Positives = 20/38 (52%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GGT GG G G G G+ A G G GG G GG AG
Sbjct: 91 GGTSGGSGAGAGGSGAGAGGSGAGAGGSGAGAGGSGAG 128
>gi|79314|pir||B28543 PAL cross-reacting lipoprotein precursor -
Haemophilus influenzae >gi|148827 (M18877) 15kd
peptidoglycan-associated outer membrane lipoprotein
precursor [Haemophilus influenzae]
Length = 154
Score = 33.6 bits (75), Expect = 0.48
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVT 84
G++ GG GG G +G G G +VG IGG IAG +++ ++
Sbjct: 63 GTLGGGALGGIAGSTIGGGR-----GQAIAAVVGAIGGAIAGSKIEEKMS 107
>gi|115614|sp|P06813|CANS_RABIT CALCIUM-DEPENDENT PROTEASE, SMALL
SUBUNIT (CALPAIN REGULATORY SUBUNIT) (CALCIUM-ACTIVATED
NEUTRAL PROTEINASE) (CANP) >gi|67667|pir||CIRBL calpain
(EC 3.4.22.17) light chain - rabbit >gi|164876 (M13364)
calcium-dependent protease [Oryctolagus cuniculus]
Length = 266
Score = 33.6 bits (75), Expect = 0.48
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 42 RGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+GG GGG G G + G+G V GG++ G GG
Sbjct: 9 KGGGGGG--GGGGLGGGLGNVLGGLISGAGG 37
Score = 33.2 bits (74), Expect = 0.63
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 26 VFGVSAFFAGSIWGGTRGGDGGGILGV-GSIAQGVGMVYGGIVGGIGGLIAG 76
+F V++F G GG GG GGG+ V G + G G GG GG GG G
Sbjct: 1 MFLVNSFLKGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGAGG 52
>gi|322647|pir||S31415 glycine-rich protein GRP22 - rape
>gi|17821|emb|CAA78762| (Z15045)
glycine-rich_protein_(aa1-291) [Brassica napus]
Length = 291
Score = 33.6 bits (75), Expect = 0.48
Identities = 19/50 (38%), Positives = 22/50 (44%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G + G GG GG GGG G G G G +GG G GG G+
Sbjct: 193 GAGGGYGGGGAGGHGGGGGGGKGGGGGGGSGAGGAHGGGYGAGGGAGEGY 242
Score = 31.7 bits (70), Expect = 1.9
Identities = 19/39 (48%), Positives = 19/39 (48%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
A I GG GG GGG G G G G YGG G GG
Sbjct: 73 AEGIGGGGGGGHGGGAGGGGGGGPGGGSGYGGGSGEGGG 111
Score = 30.9 bits (68), Expect = 3.2
Identities = 18/38 (47%), Positives = 19/38 (49%), Gaps = 2/38 (5%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GG GG GGG G +G G YGG GG GG
Sbjct: 86 GGAGGGGGGGPGGGSGYGGGSGEGGGAGYGG--GGAGG 121
Score = 29.7 bits (65), Expect = 7.2
Identities = 21/44 (47%), Positives = 23/44 (51%), Gaps = 1/44 (2%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYG-GIVGGIGGLIAG 76
AG GG GG+GGG G G+ G G G G GG GG AG
Sbjct: 161 AGGHGGGGGGGNGGGGGGGGAHGGGYGGGEGAGAGGGYGGGGAG 204
Score = 29.7 bits (65), Expect = 7.2
Identities = 20/49 (40%), Positives = 21/49 (42%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G A G GG GG GGG G G G +GG GG G AG
Sbjct: 147 GEGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGGAHGGGYGGGEGAGAG 195
>gi|71526|pir||KRHU3 keratin 13, type I, cytoskeletal, long form -
human >gi|34033|emb|CAA32786| (X14640) keratin 13 [Homo
sapiens]
Length = 458
Score = 33.6 bits (75), Expect = 0.48
Identities = 23/53 (43%), Positives = 26/53 (48%), Gaps = 9/53 (16%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLD 80
GVS F G G GG GGG+ G G G GG+ GG GG AG +D
Sbjct: 48 GVSCGFGGGADSGFGGGYGGGLGG------GYG---GGLGGGFGGGFAGGFVD 91
Score = 33.2 bits (74), Expect = 0.63
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGI-LGVGSIA-QGVGMVYGGIVGG--IGGLIAGF 77
GVS + GG+ GG GGG+ G G A G G YGG +GG GGL GF
Sbjct: 28 GVSTCSTRFVSGGSAGGYGGGVSCGFGGGADSGFGGGYGGGLGGGYGGGLGGGF 81
Score = 29.3 bits (64), Expect = 9.4
Identities = 23/71 (32%), Positives = 27/71 (37%), Gaps = 16/71 (22%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGI-- 70
S G + G + F G GG GG GGG+ G G G GG GG
Sbjct: 41 SAGGYGGGVSCGFGGGADSGFGGGYGGGLGGGYGGGLGG------GFG---GGFAGGFVD 91
Query: 71 -----GGLIAG 76
GGL+ G
Sbjct: 92 FGACDGGLLTG 102
>gi|88054|pir||A22940 keratin, 67K type II cytoskeletal - human
Length = 643
Score = 33.6 bits (75), Expect = 0.48
Identities = 20/51 (39%), Positives = 22/51 (42%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
+G F G GG GG G G G G G G GG GG GG G+
Sbjct: 92 YGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGGYGGGY 142
Score = 32.5 bits (72), Expect = 1.1
Identities = 24/65 (36%), Positives = 29/65 (43%), Gaps = 6/65 (9%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
SGG +A+ + G GS +GG GG G G G G G G + GG GG G
Sbjct: 69 SGGSIAS------ISGARGGGGGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGS 122
Query: 73 LIAGF 77
GF
Sbjct: 123 GGGGF 127
Score = 30.9 bits (68), Expect = 3.2
Identities = 19/44 (43%), Positives = 20/44 (45%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGI 70
FG F G I GG GG G G G G G G YGG G +
Sbjct: 102 FGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGGYGGGYGPV 145
Score = 30.5 bits (67), Expect = 4.2
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNY 87
G ++ +GS GG RGG GGG G G GG GG G G K+ +
Sbjct: 573 GHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSSGGRGSSSGGV---KSSGGSS 629
Query: 88 AVGFYNSLFNG 98
+V F ++ ++G
Sbjct: 630 SVKFVSTTYSG 640
Score = 30.5 bits (67), Expect = 4.2
Identities = 17/34 (50%), Positives = 18/34 (52%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GG+RGG GGG GS G YG GG GG
Sbjct: 514 GGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGG 547
>gi|6457875|gb|AAF09792.1|AE001882_10 (AE001882) hypothetical
protein [Deinococcus radiodurans]
Length = 272
Score = 33.6 bits (75), Expect = 0.48
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDG---GGILGVGSIAQGVGMVYGGI 66
+ GG + + G+S G + GG GG G GG+LG G A G+G V GG+
Sbjct: 132 SRAQGGQMGGNMGGQSGGGMS--LPGGMGGGLGGGLGSILGGLLG-GGAAGGLGSVLGGM 188
Query: 67 VGG 69
+GG
Sbjct: 189 LGG 191
Score = 31.7 bits (70), Expect = 1.9
Identities = 18/43 (41%), Positives = 26/43 (59%), Gaps = 5/43 (11%)
Query: 36 SIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFV 78
S+ GG GG GGG+ GSI G ++ GG GG+G ++ G +
Sbjct: 152 SLPGGMGGGLGGGL---GSILGG--LLGGGAAGGLGSVLGGML 189
Score = 29.7 bits (65), Expect = 7.2
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 35 GSIWGGTRGG-DGGGILGVGSIAQGVGMVYGGIVGG-IGGLIAG 76
G GG GG GGG+ G + G+G G I+GG +GG AG
Sbjct: 136 GGQMGGNMGGQSGGGMSLPGGMGGGLGGGLGSILGGLLGGGAAG 179
>gi|1172046|sp|P10325|PCP_HAEIN OUTER MEMBRANE LIPOPROTEIN PCP
PRECURSOR (15 KD LIPOPROTEIN) (PAL CROSS-REACTING
LIPOPROTEIN) >gi|1073772|pir||I64130 15 kDa
peptidoglycan-associated lipoprotein (lpp) homolog -
Haemophilus influenzae (strain Rd KW20) >gi|1574423
(U32832) 15 kDa peptidoglycan-associated lipoprotein
(lpp) [Haemophilus influenzae Rd]
Length = 155
Score = 33.6 bits (75), Expect = 0.48
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVT 84
G++ GG GG G +G G G +VG IGG IAG +++ ++
Sbjct: 63 GTLGGGALGGIAGSTIGGGR-----GQAIAAVVGAIGGAIAGSKIEEKMS 107
>gi|1946988 (AF000193) T20B6.3 gene product [Caenorhabditis elegans]
Length = 259
Score = 33.6 bits (75), Expect = 0.48
Identities = 19/46 (41%), Positives = 23/46 (49%), Gaps = 2/46 (4%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+G+ + G GG GG GGG +G G G YGG GG GG
Sbjct: 147 YGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGG--GGFGG 190
Score = 32.1 bits (71), Expect = 1.4
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 27 FGVSAFFAGSIWGGTRGG---DGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
+G + G +GG GG GGG G G G G GG GG+GG G+
Sbjct: 94 YGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGY 147
Score = 30.5 bits (67), Expect = 4.2
Identities = 18/38 (47%), Positives = 18/38 (47%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G GG GG GGG G G G G GG GG GG
Sbjct: 130 GGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGG 167
Score = 29.3 bits (64), Expect = 9.4
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 27 FGVSAFFAGSIWGGTRGG-DGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+G + G GG GG GGG G+G G GM GG GG GG
Sbjct: 114 YGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGM--GGYGGGGGG 158
>gi|2916891|emb|CAA17639.1| (AL022004) PE_PGRS [Mycobacterium
tuberculosis]
Length = 749
Score = 33.6 bits (75), Expect = 0.48
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDG-GGILGVGSIAQGVGMVYGGIVGGIGG 72
G FA GGT GG G GG GVG G+ G GG GG
Sbjct: 111 GAGGLFASGGVGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGG 156
Score = 32.1 bits (71), Expect = 1.4
Identities = 22/52 (42%), Positives = 24/52 (45%), Gaps = 3/52 (5%)
Query: 28 GVSAFFAGSIWG-GTRGG--DGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G+ F AG G G GG +GGG G G G G GG GGL AG
Sbjct: 489 GIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG 540
Score = 31.3 bits (69), Expect = 2.4
Identities = 21/46 (45%), Positives = 24/46 (51%), Gaps = 3/46 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG-GIVGGIGG 72
G FAG GG GG G + G G A GVG ++G G GG GG
Sbjct: 533 GAGGLFAGGGAGGA-GGSGNNVGGAGG-AGGVGGLFGAGGAGGSGG 576
Score = 30.9 bits (68), Expect = 3.2
Identities = 22/54 (40%), Positives = 29/54 (52%), Gaps = 5/54 (9%)
Query: 28 GVSAFFAGSIWGGTRGGDGG--GILGVGSI--AQGVGMVYGGI-VGGIGGLIAG 76
G ++ G G GG GG G++G G + G+G GG VGGIGGL+ G
Sbjct: 309 GGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLLLG 362
Score = 30.1 bits (66), Expect = 5.5
Identities = 26/69 (37%), Positives = 30/69 (42%), Gaps = 2/69 (2%)
Query: 10 NNVSGGDLATRIEASIVFGVS-AFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG-GIV 67
+ VSGG I+FG A AG GT G G G G++ G G G G
Sbjct: 428 SGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGGAGGAGGS 487
Query: 68 GGIGGLIAG 76
GIGG AG
Sbjct: 488 SGIGGFAAG 496
Score = 29.3 bits (64), Expect = 9.4
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GV F GG+ G GG + G G++ G+ GG GG
Sbjct: 561 GVGGLFGAGGAGGS--GGGGSVAGDSGAGGNAGLLAPGLAGGAGG 603
Score = 29.3 bits (64), Expect = 9.4
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSI--AQGVGMVYGGIVGGIG 71
GGD + + V G F + G GGD G + G G A G G G GG G
Sbjct: 618 GGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAGGAGGSGRTDLGGAGGAG 677
Query: 72 G 72
G
Sbjct: 678 G 678
Score = 29.3 bits (64), Expect = 9.4
Identities = 22/60 (36%), Positives = 27/60 (44%), Gaps = 3/60 (5%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
SGG +A ++FG S GS GG G G G G G G++ G GG GG
Sbjct: 254 SGGAGGAGGKAGLLFG-SGGAGGS--GGAGGFANGSTGGAGGAGGGAGLIGNGGNGGSGG 310
Score = 29.3 bits (64), Expect = 9.4
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 8/48 (16%)
Query: 34 AGSIWGGTRGGDGG--------GILGVGSIAQGVGMVYGGIVGGIGGL 73
AG I G GG GG G G G G G++ G GG GG+
Sbjct: 297 AGLIGNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGM 344
>gi|121742|sp|P09851|GTPA_BOVIN GTPASE-ACTIVATING PROTEIN (GAP) (RAS
P21 PROTEIN ACTIVATOR) (P120GAP) (RASGAP)
>gi|89588|pir||S01966 GTPase-activating protein - bovine
>gi|385|emb|CAA31122| (X12602) GTPase binding protein
(AA 1 - 1044) [Bos taurus]
Length = 1044
Score = 33.2 bits (74), Expect = 0.63
Identities = 24/65 (36%), Positives = 32/65 (48%), Gaps = 9/65 (13%)
Query: 20 RIEASIVFGVSAFFAGSIWGG---TRGGD---GGGILGVGSIAQ---GVGMVYGGIVGGI 70
+I A++ +A F G G T GG G G LG GS+A GVG+ GG G+
Sbjct: 37 KIPAALPVAAAAPFPGLAEAGVAATLGGGAALGSGFLGAGSVAGTPGGVGLSAGGAAAGV 96
Query: 71 GGLIA 75
G+ A
Sbjct: 97 AGVAA 101
>gi|476947|pir||A47369 RNA-binding protein (alternatively spliced)
SqdA - fruit fly (Drosophila melanogaster)
>gi|385454|bbs|133000 (S62100) SqdA=RNA-binding protein
{alternatively spliced} [Drosophila melanogaster,
Peptide, 321 aa] [Drosophila melanogaster]
Length = 321
Score = 33.2 bits (74), Expect = 0.63
Identities = 26/57 (45%), Positives = 28/57 (48%), Gaps = 8/57 (14%)
Query: 39 GGTRGGDGG--GILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGFYN 93
GG RGG GG G G + G G YGG GG GG AG D YA G+YN
Sbjct: 229 GGMRGGRGGYGGRGGYNNQWDGQGS-YGGYGGGYGGYGAGGYGD-----YYAGGYYN 279
>gi|212742 (M21880) tropoelastin [Gallus gallus]
Length = 700
Score = 33.2 bits (74), Expect = 0.63
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG G GG VG +A GV GG+V G+GGL+ G
Sbjct: 474 GGLAPGVGGLAPAVGGLAPGV----GGLVPGVGGLVPG 507
Score = 32.5 bits (72), Expect = 1.1
Identities = 17/38 (44%), Positives = 21/38 (54%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG G GG + GVG + GV GG+ G+GGL G
Sbjct: 488 GGLAPGVGGLVPGVGGLVPGV----GGLAPGVGGLAPG 521
Score = 30.9 bits (68), Expect = 3.2
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGI--VGGIGG-LIAGFVLDKNVTYNYAVG 90
GG G GG + GVG +A GVG + G+ V G+GG A K Y VG
Sbjct: 495 GGLVPGVGGLVPGVGGLAPGVGGLAPGVGAVPGVGGPAAAAKAAAKAAKYGAGVG 549
Score = 30.9 bits (68), Expect = 3.2
Identities = 25/61 (40%), Positives = 31/61 (49%), Gaps = 6/61 (9%)
Query: 35 GSIWGGTR-GGDGGGILGVGSIAQGVGMVYGGI----VGGIGGLIAGFVLDKNVTYNYAV 89
G I GG GG G G LG G + GVG+ G+ GG+GG + GF TY A+
Sbjct: 620 GGIPGGLGVGGLGVGGLGAGGLGAGVGVPGFGVSPIFPGGVGGQL-GFGGKPPKTYGGAL 678
Query: 90 G 90
G
Sbjct: 679 G 679
Score = 30.5 bits (67), Expect = 4.2
Identities = 14/23 (60%), Positives = 16/23 (68%)
Query: 47 GGILGVGSIAQGVGMVYGGIVGG 69
GGI GVG + GVG+V G VGG
Sbjct: 206 GGIPGVGGVVPGVGVVPGAGVGG 228
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG GG GVG + GV GG+V G+GGL G
Sbjct: 481 GGLAPAVGGLAPGVGGLVPGV----GGLVPGVGGLAPG 514
Score = 29.7 bits (65), Expect = 7.2
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 18/58 (31%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMV------------------YGGIVGGIGGLIAGFV 78
GG G GG GVG +A GVG V YG VGG+ G + G V
Sbjct: 502 GGLVPGVGGLAPGVGGLAPGVGAVPGVGGPAAAAKAAAKAAKYGAGVGGVPGAVPGAV 559
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 43 GGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G G+ GVG I G+G+ GG+ G+GGL AG
Sbjct: 610 GVPGAGVPGVGGIPGGLGV--GGL--GVGGLGAG 639
>gi|119296|sp|P07916|ELS_CHICK ELASTIN PRECURSOR (TROPOELASTIN)
>gi|212804 (M15889) tropoelastin precursor [Gallus
gallus]
Length = 750
Score = 33.2 bits (74), Expect = 0.63
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG G GG VG +A GV GG+V G+GGL+ G
Sbjct: 524 GGLAPGVGGLAPAVGGLAPGV----GGLVPGVGGLVPG 557
Score = 32.5 bits (72), Expect = 1.1
Identities = 17/38 (44%), Positives = 21/38 (54%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG G GG + GVG + GV GG+ G+GGL G
Sbjct: 538 GGLAPGVGGLVPGVGGLVPGV----GGLAPGVGGLAPG 571
Score = 30.9 bits (68), Expect = 3.2
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGI--VGGIGG-LIAGFVLDKNVTYNYAVG 90
GG G GG + GVG +A GVG + G+ V G+GG A K Y VG
Sbjct: 545 GGLVPGVGGLVPGVGGLAPGVGGLAPGVGAVPGVGGPAAAAKAAAKAAKYGAGVG 599
Score = 30.9 bits (68), Expect = 3.2
Identities = 25/61 (40%), Positives = 31/61 (49%), Gaps = 6/61 (9%)
Query: 35 GSIWGGTR-GGDGGGILGVGSIAQGVGMVYGGI----VGGIGGLIAGFVLDKNVTYNYAV 89
G I GG GG G G LG G + GVG+ G+ GG+GG + GF TY A+
Sbjct: 670 GGIPGGLGVGGLGVGGLGAGGLGAGVGVPGFGVSPIFPGGVGGQL-GFGGKPPKTYGGAL 728
Query: 90 G 90
G
Sbjct: 729 G 729
Score = 30.5 bits (67), Expect = 4.2
Identities = 14/23 (60%), Positives = 16/23 (68%)
Query: 47 GGILGVGSIAQGVGMVYGGIVGG 69
GGI GVG + GVG+V G VGG
Sbjct: 266 GGIPGVGGVVPGVGVVPGAGVGG 288
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG GG GVG + GV GG+V G+GGL G
Sbjct: 531 GGLAPAVGGLAPGVGGLVPGV----GGLVPGVGGLAPG 564
Score = 29.7 bits (65), Expect = 7.2
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 18/58 (31%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMV------------------YGGIVGGIGGLIAGFV 78
GG G GG GVG +A GVG V YG VGG+ G + G V
Sbjct: 552 GGLVPGVGGLAPGVGGLAPGVGAVPGVGGPAAAAKAAAKAAKYGAGVGGVPGAVPGAV 609
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 43 GGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G G+ GVG I G+G+ GG+ G+GGL AG
Sbjct: 660 GVPGAGVPGVGGIPGGLGV--GGL--GVGGLGAG 689
>gi|226139|prf||1411306A GTPase activating protein GAP [Bos taurus]
Length = 1044
Score = 33.2 bits (74), Expect = 0.63
Identities = 24/65 (36%), Positives = 32/65 (48%), Gaps = 9/65 (13%)
Query: 20 RIEASIVFGVSAFFAGSIWGG---TRGGD---GGGILGVGSIAQ---GVGMVYGGIVGGI 70
+I A++ +A F G G T GG G G LG GS+A GVG+ GG G+
Sbjct: 37 KIPAALPVAAAAPFPGLAEAGVAATLGGGAALGSGFLGAGSVAGTPGGVGLSAGGAAAGV 96
Query: 71 GGLIA 75
G+ A
Sbjct: 97 AGVAA 101
>gi|2119175|pir||A26601 elastin precursor - chicken (fragment)
Length = 784
Score = 33.2 bits (74), Expect = 0.63
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG G GG VG +A GV GG+V G+GGL+ G
Sbjct: 558 GGLAPGVGGLAPAVGGLAPGV----GGLVPGVGGLVPG 591
Score = 32.5 bits (72), Expect = 1.1
Identities = 17/38 (44%), Positives = 21/38 (54%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG G GG + GVG + GV GG+ G+GGL G
Sbjct: 572 GGLAPGVGGLVPGVGGLVPGV----GGLAPGVGGLAPG 605
Score = 30.9 bits (68), Expect = 3.2
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGI--VGGIGG-LIAGFVLDKNVTYNYAVG 90
GG G GG + GVG +A GVG + G+ V G+GG A K Y VG
Sbjct: 579 GGLVPGVGGLVPGVGGLAPGVGGLAPGVGAVPGVGGPAAAAKAAAKAAKYGAGVG 633
Score = 30.9 bits (68), Expect = 3.2
Identities = 25/61 (40%), Positives = 31/61 (49%), Gaps = 6/61 (9%)
Query: 35 GSIWGGTR-GGDGGGILGVGSIAQGVGMVYGGI----VGGIGGLIAGFVLDKNVTYNYAV 89
G I GG GG G G LG G + GVG+ G+ GG+GG + GF TY A+
Sbjct: 704 GGIPGGLGVGGLGVGGLGAGGLGAGVGVPGFGVSPIFPGGVGGQL-GFGGKPPKTYGGAL 762
Query: 90 G 90
G
Sbjct: 763 G 763
Score = 30.5 bits (67), Expect = 4.2
Identities = 14/23 (60%), Positives = 16/23 (68%)
Query: 47 GGILGVGSIAQGVGMVYGGIVGG 69
GGI GVG + GVG+V G VGG
Sbjct: 290 GGIPGVGGVVPGVGVVPGAGVGG 312
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/38 (44%), Positives = 20/38 (51%), Gaps = 4/38 (10%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG GG GVG + GV GG+V G+GGL G
Sbjct: 565 GGLAPAVGGLAPGVGGLVPGV----GGLVPGVGGLAPG 598
Score = 29.7 bits (65), Expect = 7.2
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 18/58 (31%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMV------------------YGGIVGGIGGLIAGFV 78
GG G GG GVG +A GVG V YG VGG+ G + G V
Sbjct: 586 GGLVPGVGGLAPGVGGLAPGVGAVPGVGGPAAAAKAAAKAAKYGAGVGGVPGAVPGAV 643
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 43 GGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G G G+ GVG I G+G+ GG+ G+GGL AG
Sbjct: 694 GVPGAGVPGVGGIPGGLGV--GGL--GVGGLGAG 723
>gi|2896724|emb|CAA17203.1| (AL021897) PE_PGRS [Mycobacterium
tuberculosis]
Length = 767
Score = 33.2 bits (74), Expect = 0.63
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 34 AGSIWG-GTRGGDGG--GILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLD-KNVTYN 86
AG G G RGG GG G GVG G+ GG GG+GG G L ++VT++
Sbjct: 290 AGGTGGLGNRGGAGGAGGAGGVGGAGGAAGLWGGGGAGGVGGTGGGAGLGAQSVTFS 346
Score = 30.9 bits (68), Expect = 3.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG G G G+ G G +G G VGG GG+
Sbjct: 231 GGAGGAGGAGVAGAGGFEGTIGAGGAGGVGGAGGV 265
Score = 29.7 bits (65), Expect = 7.2
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 13 SGGDLATRIEASIV-FGVSAFFAGSIWGGTRGGDGG--GILGVGSIAQGVGMVYGGIVGG 69
SGGD T + GV + F GG GG+GG G+ GVG G+ G +GG
Sbjct: 384 SGGDGGTGGQGGAGGAGVFSLFGS---GGGPGGNGGVGGVGGVGGAGGRAGLFGVGGLGG 440
Query: 70 IGG 72
GG
Sbjct: 441 AGG 443
>gi|2916892|emb|CAA17640.1| (AL022004) PE_PGRS [Mycobacterium
tuberculosis]
Length = 882
Score = 33.2 bits (74), Expect = 0.63
Identities = 21/64 (32%), Positives = 27/64 (41%), Gaps = 1/64 (1%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+GG T + +G + G+ GT G G G V G G YGG GG+GG
Sbjct: 338 AGGSSGTVFALDLSWGGAGGNGGAATTGTGGAGGTGGFAVAPDFIGFGAAYGG-AGGLGG 396
Query: 73 LIAG 76
G
Sbjct: 397 AATG 400
Score = 32.1 bits (71), Expect = 1.4
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSI-----WGGTRGGDGGGILGVGSIAQGVGMVYGGIVG 68
GGD + I G + G+ G GGD G++GVG G +G G
Sbjct: 771 GGDGGEAVAVGIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTG 830
Query: 69 GIGG 72
G GG
Sbjct: 831 GNGG 834
Score = 31.3 bits (69), Expect = 2.4
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 11/43 (25%)
Query: 40 GTRGGDGGGILGV----------GSIAQGVGMVYGGIVGGIGG 72
G GGDGGG LGV G A VG+ GG GG GG
Sbjct: 751 GGAGGDGGGALGVLGGMGGDGGDGGEAVAVGIAVGG-AGGAGG 792
Score = 29.3 bits (64), Expect = 9.4
Identities = 27/72 (37%), Positives = 31/72 (42%), Gaps = 7/72 (9%)
Query: 13 SGGDLATRIEASI--VFGVSAFFAGSIWGGTRGGDG----GGILGVGSIAQGVGMVYGGI 66
+GGD I A I V GV + G GG G GG+ G G G + GG
Sbjct: 472 TGGDALGLIGAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGG- 530
Query: 67 VGGIGGLIAGFV 78
GG GG GFV
Sbjct: 531 SGGAGGDGFGFV 542
Score = 29.3 bits (64), Expect = 9.4
Identities = 20/70 (28%), Positives = 28/70 (39%), Gaps = 2/70 (2%)
Query: 5 TSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTR--GGDGGGILGVGSIAQGVGMV 62
T + +N +GG+ + A G + G GT GG GG G+ G G
Sbjct: 553 TGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSARGLIFALGGAGAA 612
Query: 63 YGGIVGGIGG 72
G G+GG
Sbjct: 613 GGDASTGVGG 622
>gi|283665|pir||C41732 heterogeneous nuclear RNP protein clone
pHRP40.1 - fruit fly (Drosophila melanogaster)
>gi|11038|emb|CAA44503| (X62637) hrp40.1 [Drosophila
melanogaster]
Length = 321
Score = 33.2 bits (74), Expect = 0.63
Identities = 26/57 (45%), Positives = 28/57 (48%), Gaps = 8/57 (14%)
Query: 39 GGTRGGDGG--GILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGFYN 93
GG RGG GG G G + G G YGG GG GG AG D YA G+YN
Sbjct: 229 GGMRGGRGGYGGRGGYNNQWDGQGS-YGGYGGGYGGYGAGGYGD-----YYAGGYYN 279
>gi|3201493|emb|CAA11445| (AJ223578) intermediate filament protein
C2 [Branchiostoma lanceolatum]
Length = 795
Score = 33.2 bits (74), Expect = 0.63
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 35 GSIWGG--TRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
GS +GG + GG GGG G G++ G +GG GG GG GF
Sbjct: 34 GSSFGGGASFGGGGGGGFGGGAMMSAGGGGFGGGGGGFGGGGGGF 78
Score = 29.3 bits (64), Expect = 9.4
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 27 FGVSAFFA--GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
FG A + G +GG GG GGG G S Q G GG GG GG
Sbjct: 51 FGGGAMMSAGGGGFGGGGGGFGGGGGGFASTTQRRGGGGGGGFGGRGG 98
>gi|5901830|gb|AAD55423.1|AF181637_1 (AF181637) BcDNA.GH07910
[Drosophila melanogaster]
Length = 1266
Score = 33.2 bits (74), Expect = 0.63
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG 69
+ V G + R+ S+ G+ AG+I GGT GG GG G V GG VGG
Sbjct: 739 SGVVTGPGSDRVSVSVDSGLGGNNAGAIGGGTVGGGVGG-----------GGVGGGGVGG 787
Query: 70 IGG 72
GG
Sbjct: 788 GGG 790
>gi|477707|pir||B47369 RNA-binding protein (alternatively spliced)
SqdB - fruit fly (Drosophila melanogaster)
>gi|385455|bbs|133001 (S62100) SqdB=RNA-binding protein
{alternatively spliced} [Drosophila melanogaster,
Peptide, 308 aa] [Drosophila melanogaster]
Length = 308
Score = 32.8 bits (73), Expect = 0.83
Identities = 27/65 (41%), Positives = 29/65 (44%), Gaps = 12/65 (18%)
Query: 35 GSIWGGTRGGDGGGILGVGSIA------QGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYA 88
G + GG RGG GG G G G G YGG GG GG AG D YA
Sbjct: 221 GGMRGGPRGGMRGGRGGYGGRGGYNNQWDGQGS-YGGYGGGYGGYGAGGYGD-----YYA 274
Query: 89 VGFYN 93
G+YN
Sbjct: 275 GGYYN 279
>gi|465761|sp|P34306|YKQA_CAEEL HYPOTHETICAL 38.5 KD PROTEIN
C06E1.11 IN CHROMOSOME III >gi|289621 (L16559) putative
[Caenorhabditis elegans]
Length = 371
Score = 32.8 bits (73), Expect = 0.83
Identities = 16/36 (44%), Positives = 21/36 (57%), Gaps = 3/36 (8%)
Query: 44 GDGGGILGVG---SIAQGVGMVYGGIVGGIGGLIAG 76
G GG + G +I G+G + GGIVGGI G + G
Sbjct: 291 GFGGALAGAAIGTAICPGIGTIVGGIVGGITGGVGG 326
Score = 32.1 bits (71), Expect = 1.4
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 54 SIAQGVGMVYGGIVGGI-GGLIAGFVLD 80
+I G+G ++GGI+GGI GGL G V +
Sbjct: 112 AIFPGIGTIFGGIIGGIAGGLFGGHVAE 139
>gi|1706637|sp|Q99372|ELS_RAT ELASTIN PRECURSOR (TROPOELASTIN)
>gi|2144809|pir||EART elastin precursor - rat >gi|207445
(M60647) tropoelastin [Rattus norvegicus]
Length = 864
Score = 32.8 bits (73), Expect = 0.83
Identities = 24/67 (35%), Positives = 31/67 (45%), Gaps = 3/67 (4%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIG 71
V+GG A A + + G G GG G G LG G + G G+ GG+ G G
Sbjct: 712 VAGGAPAAAAAAKAAAKAAQYGLGGAGGLGAGGLGAGGLGAGGLGAG-GLGAGGL--GAG 768
Query: 72 GLIAGFV 78
G+I G V
Sbjct: 769 GVIPGAV 775
Score = 29.7 bits (65), Expect = 7.2
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
G A +A+ G G + GG G G +GVG + VG +GGIGGL
Sbjct: 108 GAGAAAAYKAAAKAGAGLGGIGGVPGGVGVGGVPGAVGVGGVPGAVGG-----IGGIGGL 162
Score = 29.7 bits (65), Expect = 7.2
Identities = 24/65 (36%), Positives = 31/65 (46%), Gaps = 3/65 (4%)
Query: 15 GDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLI 74
G +A A+ +A A G GG G G LG G + G G+ GG+ G GGL
Sbjct: 710 GGVAGGAPAAAAAAKAAAKAAQYGLGGAGGLGAGGLGAGGLGAG-GLGAGGL--GAGGLG 766
Query: 75 AGFVL 79
AG V+
Sbjct: 767 AGGVI 771
>gi|121631|sp|P27484|GRP2_NICSY GLYCINE-RICH CELL WALL STRUCTURAL
PROTEIN 2 PRECURSOR >gi|72323|pir||KNNT2S glycine-rich
protein 2 - wood tobacco >gi|19743|emb|CAA42622|
(X60007) nsGRP-2 [Nicotiana sylvestris]
Length = 214
Score = 32.8 bits (73), Expect = 0.83
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 1 MRELTSIEMNNVSGGDLATR---IEASIVFGVSAFFAGSIWGGTRGGDG--GGILGVGSI 55
+ E ++E SGGD T+ + V G GG RGG G GG G G
Sbjct: 49 LAEGETVEFEVESGGDGRTKAVDVTGPDGAAVQGGRGGGGGGGGRGGGGYGGGSGGYGGG 108
Query: 56 AQGVGMVYGGIVGGIGG 72
+G YGG GG GG
Sbjct: 109 GRGGSRGYGGGDGGYGG 125
Score = 29.7 bits (65), Expect = 7.2
Identities = 21/46 (45%), Positives = 23/46 (49%), Gaps = 2/46 (4%)
Query: 28 GVSAFFAGSIWGGTRG-GDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G S + G GG+RG G G G G G G G YGG GG GG
Sbjct: 100 GGSGGYGGGGRGGSRGYGGGDGGYGGGG-GYGGGSRYGGGGGGYGG 144
>gi|207462 (M86376) tropoelastin [Rattus norvegicus]
Length = 307
Score = 32.8 bits (73), Expect = 0.83
Identities = 24/67 (35%), Positives = 31/67 (45%), Gaps = 3/67 (4%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIG 71
V+GG A A + + G G GG G G LG G + G G+ GG+ G G
Sbjct: 155 VAGGAPAAAAAAKAAAKAAQYGLGGAGGLGAGGLGAGGLGAGGLGAG-GLGAGGL--GAG 211
Query: 72 GLIAGFV 78
G+I G V
Sbjct: 212 GVIPGAV 218
Score = 29.7 bits (65), Expect = 7.2
Identities = 24/65 (36%), Positives = 31/65 (46%), Gaps = 3/65 (4%)
Query: 15 GDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLI 74
G +A A+ +A A G GG G G LG G + G G+ GG+ G GGL
Sbjct: 153 GGVAGGAPAAAAAAKAAAKAAQYGLGGAGGLGAGGLGAGGLGAG-GLGAGGL--GAGGLG 209
Query: 75 AGFVL 79
AG V+
Sbjct: 210 AGGVI 214
>gi|110610|pir||S07330 keratin, epidermal - mouse
>gi|52787|emb|CAA24214| (V00830) keratin reading frame
[Mus musculus]
Length = 570
Score = 32.8 bits (73), Expect = 0.83
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 27 FGVSAFFAGSIWGGTRGGD--GGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVT 84
+G S+F GS GG+ GG GGG G G G G GG++ G G + + D+ +
Sbjct: 97 YGGSSFGGGSFGGGSFGGGSFGGGGCGGGFGGGGFGGDGGGLLSGNGRVTMRNLNDRLAS 156
Query: 85 Y 85
Y
Sbjct: 157 Y 157
Score = 32.8 bits (73), Expect = 0.83
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G ++ GS G RGG GG G G + G G GG GG GG
Sbjct: 497 GGGSYGGGSSGCGGRGGGSGGGYGGGGSSGGAGGRGGGSGGGYGG 541
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 27 FGVSAF---FAGSIWGGTRGGD--GGGILGVGSIAQGVGMVYGGIVGGIGG 72
+G S+F + GS +GG GG GGG G GS G GG GG GG
Sbjct: 79 YGGSSFGGGYGGSSFGGGYGGSSFGGGSFGGGSFGGG-SFGGGGCGGGFGG 128
Score = 30.9 bits (68), Expect = 3.2
Identities = 27/73 (36%), Positives = 33/73 (44%), Gaps = 15/73 (20%)
Query: 16 DLATRIE------ASIVFGVSAFFAGSIWGGTRGGDGGGILGVGS------IAQGVGMVY 63
D+ TR+E S++ G + G GG RGG GGG G S + G G Y
Sbjct: 434 DIKTRLENEIQTYRSLLEGEGSSSGGG--GGRRGGSGGGSYGGSSGGGSYGGSSGGGGSY 491
Query: 64 GGIVGGIGGLIAG 76
GG GG GG G
Sbjct: 492 GGSSGG-GGSYGG 503
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/40 (42%), Positives = 20/40 (49%), Gaps = 1/40 (2%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+ GS GG+ GG GG G + G G YGG G GG
Sbjct: 472 YGGSSGGGSYGGSSGGGGSYGG-SSGGGGSYGGGSSGCGG 510
Score = 29.3 bits (64), Expect = 9.4
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 35 GSIWGGTRGGDG---GGILGVGSIAQGVGMVYGG--IVGGIGG 72
G +GG+ GG G GG G G G G YGG GG GG
Sbjct: 488 GGSYGGSSGGGGSYGGGSSGCGGRGGGSGGGYGGGGSSGGAGG 530
>gi|223657|prf||0905238A keratin subunit,epidermal [Mus musculus]
Length = 569
Score = 32.8 bits (73), Expect = 0.83
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 27 FGVSAFFAGSIWGGTRGGD--GGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVT 84
+G S+F GS GG+ GG GGG G G G G GG++ G G + + D+ +
Sbjct: 96 YGGSSFGGGSFGGGSFGGGSFGGGGCGGGFGGGGFGGDGGGLLSGNGRVTMRNLNDRLAS 155
Query: 85 Y 85
Y
Sbjct: 156 Y 156
Score = 32.8 bits (73), Expect = 0.83
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G ++ GS G RGG GG G G + G G GG GG GG
Sbjct: 496 GGGSYGGGSSGCGGRGGGSGGGYGGGGSSGGAGGRGGGSGGGYGG 540
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 27 FGVSAF---FAGSIWGGTRGGD--GGGILGVGSIAQGVGMVYGGIVGGIGG 72
+G S+F + GS +GG GG GGG G GS G GG GG GG
Sbjct: 78 YGGSSFGGGYGGSSFGGGYGGSSFGGGSFGGGSFGGG-SFGGGGCGGGFGG 127
Score = 30.9 bits (68), Expect = 3.2
Identities = 27/73 (36%), Positives = 33/73 (44%), Gaps = 15/73 (20%)
Query: 16 DLATRIE------ASIVFGVSAFFAGSIWGGTRGGDGGGILGVGS------IAQGVGMVY 63
D+ TR+E S++ G + G GG RGG GGG G S + G G Y
Sbjct: 433 DIKTRLENEIQTYRSLLEGEGSSSGGG--GGRRGGSGGGSYGGSSGGGSYGGSSGGGGSY 490
Query: 64 GGIVGGIGGLIAG 76
GG GG GG G
Sbjct: 491 GGSSGG-GGSYGG 502
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/40 (42%), Positives = 20/40 (49%), Gaps = 1/40 (2%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+ GS GG+ GG GG G + G G YGG G GG
Sbjct: 471 YGGSSGGGSYGGSSGGGGSYGG-SSGGGGSYGGGSSGCGG 509
Score = 29.3 bits (64), Expect = 9.4
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 35 GSIWGGTRGGDG---GGILGVGSIAQGVGMVYGG--IVGGIGG 72
G +GG+ GG G GG G G G G YGG GG GG
Sbjct: 487 GGSYGGSSGGGGSYGGGSSGCGGRGGGSGGGYGGGGSSGGAGG 529
>gi|1351109|sp|Q08473|SQD_DROME RNA-BINDING PROTEIN SQUID
(HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 40) (HNRNP 40)
Length = 345
Score = 32.8 bits (73), Expect = 0.83
Identities = 27/65 (41%), Positives = 29/65 (44%), Gaps = 12/65 (18%)
Query: 35 GSIWGGTRGGDGGGILGVGSIA------QGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYA 88
G + GG RGG GG G G G G YGG GG GG AG D YA
Sbjct: 221 GGMRGGPRGGMRGGRGGYGGRGGYNNQWDGQGS-YGGYGGGYGGYGAGGYGD-----YYA 274
Query: 89 VGFYN 93
G+YN
Sbjct: 275 GGYYN 279
>gi|4557699|ref|NP_000214.1|| keratin 12
>gi|2497269|sp|Q99456|K1CL_HUMAN KERATIN, TYPE I
CYTOSKELETAL 12 (CYTOKERATIN 12)
>gi|1531535|dbj|BAA11376| (D78367) K12 keratin [Homo
sapiens] >gi|2943724|dbj|BAA25063| (AB007119) keratin 12
[Homo sapiens]
Length = 494
Score = 32.8 bits (73), Expect = 0.83
Identities = 26/75 (34%), Positives = 33/75 (43%), Gaps = 13/75 (17%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGI---LGVGSIAQGVGMVYGGIVGG- 69
G A+ +FG S+ F G GG G G LG GS G+GM +GG GG
Sbjct: 50 GASCGGGFSAASMFGSSSGFGGGSGSSMAGGLGAGYGRALGGGSFG-GLGMGFGGSPGGG 108
Query: 70 --------IGGLIAG 76
GGL++G
Sbjct: 109 SLGILSGNDGGLLSG 123
>gi|2661667|emb|CAA15773| (AL009198) PE_PGRS [Mycobacterium
tuberculosis]
Length = 731
Score = 32.8 bits (73), Expect = 0.83
Identities = 25/65 (38%), Positives = 32/65 (48%), Gaps = 3/65 (4%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG-GIVGGIG 71
+GG+ T+ A + G + AG I G GG GGG G + G +YG G GGIG
Sbjct: 138 NGGNGFTQTTAGVAGG-NGGSAGLIGNGGAGG-GGGAGAAGGLGGNGGWLYGNGGAGGIG 195
Query: 72 GLIAG 76
G G
Sbjct: 196 GAGTG 200
>gi|2791527|emb|CAA16064| (AL021246) PE_PGRS [Mycobacterium
tuberculosis]
Length = 694
Score = 32.8 bits (73), Expect = 0.83
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQG-VGMVYGGIVG-GI 70
+GGD AT S G + AG G G GGG G G +AQG + +GG G G
Sbjct: 276 TGGDGATATAGS---GKATGGAGGDGGTAAAGGGGGNGGDGGVAQGDIASAFGGDGGNGS 332
Query: 71 GGLIAG 76
G+ AG
Sbjct: 333 DGVAAG 338
Score = 30.1 bits (66), Expect = 5.5
Identities = 27/66 (40%), Positives = 32/66 (47%), Gaps = 8/66 (12%)
Query: 11 NVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGI 70
N GG AT E + GV A G + G GG GG LGVG + G G V G GG
Sbjct: 505 NGGGGGTATFHEDPVA-GVWA--VGGVGGD--GGSGGSSLGVGGVG-GAGGVGG--KGGA 556
Query: 71 GGLIAG 76
G++ G
Sbjct: 557 SGMLIG 562
Score = 29.3 bits (64), Expect = 9.4
Identities = 22/64 (34%), Positives = 29/64 (44%), Gaps = 6/64 (9%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG 69
N SGG+ +T + + + G AG G G GG G G IA G G GG + G
Sbjct: 587 NGGSGGNASTFGDENSIGG-----AGGTGGNGGNGANGGNGGAGGIAGGAG-GSGGFLSG 640
Query: 70 IGGL 73
G+
Sbjct: 641 AAGV 644
>gi|2911021|emb|CAA17514| (AL021958) PE_PGRS [Mycobacterium
tuberculosis]
Length = 801
Score = 32.8 bits (73), Expect = 0.83
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRG-GDGGGILGVGSIAQGVGMVYGGIVGGIG 71
+GG+ A+ V GV F G GG G G GG+ G G G G + GG G
Sbjct: 183 AGGNAGMLFGAAGVGGVGGFSNGGATGGAGGAGGAGGLFGAGRERGSGGS--GNLTGGAG 240
Query: 72 G 72
G
Sbjct: 241 G 241
Score = 32.1 bits (71), Expect = 1.4
Identities = 22/68 (32%), Positives = 26/68 (37%), Gaps = 1/68 (1%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGI-VG 68
N +GG A A G F GG GG G G GM++G VG
Sbjct: 138 NGGAGGSGAPGAGAGGNGGAGGLFGSGGAGGASTDVAGGAGGAGGAGGNAGMLFGAAGVG 197
Query: 69 GIGGLIAG 76
G+GG G
Sbjct: 198 GVGGFSNG 205
Score = 30.1 bits (66), Expect = 5.5
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Query: 9 MNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSI--AQGVGMVYG-G 65
+ V+GG I+FG GGT G G G G+G I A G +++G G
Sbjct: 440 IGGVNGGAGGAGGAGGILFGT---------GGTGGSGGPGATGLGGIGGAGGAALLFGSG 490
Query: 66 IVGGIGG 72
GG GG
Sbjct: 491 GAGGSGG 497
Score = 29.7 bits (65), Expect = 7.2
Identities = 17/46 (36%), Positives = 20/46 (42%), Gaps = 1/46 (2%)
Query: 28 GVSAFFAGSIWG-GTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G S AG G G GG+ G + G + G GG GG GG
Sbjct: 168 GASTDVAGGAGGAGGAGGNAGMLFGAAGVGGVGGFSNGGATGGAGG 213
>gi|3282276 (AF009630) l16 [bacteriophage bIL170]
Length = 916
Score = 32.8 bits (73), Expect = 0.83
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 24 SIVFGVSAFFAGSIWG-------GTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
S VF FA S WG G G V S+ GV GG G I+G
Sbjct: 707 SSVFSAIGSFASSAWGVVQSIWSAVSGFFSGIFNSVSSVVSGVFSALGGFASNAWGAISG 766
Query: 77 FVLDKNVTYNYAVGFYNSLFNG 98
+N F++ +FNG
Sbjct: 767 -------VFNGVGNFFSGVFNG 781
>gi|6678643|ref|NP_032499.1|| keratin complex 2, basic, gene 1
>gi|6226639|sp|P04104|K2C1_MOUSE KERATIN, TYPE II
CYTOSKELETAL 1 (CYTOKERATIN 1) (67 KD CYTOKERATIN)
>gi|4159806 (M10937) type II keratin subunit protein
[Mus musculus]
Length = 628
Score = 32.8 bits (73), Expect = 0.83
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 6 SIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGT--RGGDGGGILGVGSIAQGV---- 59
S + N+ GG R + V G F G GG+ RGG GGG G G G
Sbjct: 65 SKSLMNLGGG----RSISKSVAGGGGSFCGGFGGGSYGRGGFGGGSYGGGGFGGGSFGGG 120
Query: 60 ---GMVYGGIVGGIGGLIAG 76
G +GG GG GG +G
Sbjct: 121 GFGGSGFGGGSGGGGGFGSG 140
>gi|283666|pir||B41732 heterogeneous nuclear RNP protein clone
pHRP40.2 - fruit fly (Drosophila melanogaster)
>gi|11040|emb|CAA44504| (X62638) hrp40.2 [Drosophila
melanogaster]
Length = 345
Score = 32.8 bits (73), Expect = 0.83
Identities = 27/65 (41%), Positives = 29/65 (44%), Gaps = 12/65 (18%)
Query: 35 GSIWGGTRGGDGGGILGVGSIA------QGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYA 88
G + GG RGG GG G G G G YGG GG GG AG D YA
Sbjct: 221 GGMRGGPRGGMRGGRGGYGGRGGYNNQWDGQGS-YGGYGGGYGGYGAGGYGD-----YYA 274
Query: 89 VGFYN 93
G+YN
Sbjct: 275 GGYYN 279
>gi|4206086|gb|AAD11416.1| (AF084571) keratin 17 [Canis
familiaris]
Length = 280
Score = 32.8 bits (73), Expect = 0.83
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQ---GVGMVYGGI 66
+ + GG T S G AGS G+ GG G + G G + G G YGG
Sbjct: 18 SGLGGGSSRTSCRLSGSLG-----AGSCRLGSAGGLGSVLGGSGYSSCYNFGSGSAYGGS 72
Query: 67 VGGIGGLIAG 76
GG+ GL+AG
Sbjct: 73 FGGVDGLLAG 82
>gi|4678224|gb|AAD26969.1|AC007135_6 (AC007135) unknown protein
[Arabidopsis thaliana]
Length = 255
Score = 32.8 bits (73), Expect = 0.83
Identities = 19/50 (38%), Positives = 22/50 (44%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G + G GG GG GGG G G G G +GG G GG G+
Sbjct: 154 GAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGGAHGGGYGAGGGAGEGY 203
Score = 30.1 bits (66), Expect = 5.5
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
G A + G GG GG GGG G G G G +GG GG G AG
Sbjct: 111 GGGAGYGGGEAGGHGGGGGGGAGGGGG---GGGGAHGGGYGGGQGAGAG 156
Score = 29.7 bits (65), Expect = 7.2
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G G I GG GG GGG G G G G YGG G GG
Sbjct: 71 GAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGG--YGGGSGEGGG 113
Score = 29.7 bits (65), Expect = 7.2
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 35 GSIWGGTRG-GDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GS +GG G G G G G G I G G +GG GG GG
Sbjct: 59 GSGYGGGSGEGGGAGGHGEGHIGGGGGGGHGGGAGGGGG 97
Score = 29.7 bits (65), Expect = 7.2
Identities = 25/60 (41%), Positives = 26/60 (42%), Gaps = 3/60 (5%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVY-GGIVGGIGG 72
GG E I G G GG GG GGG G GS +G G Y GG GG GG
Sbjct: 69 GGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGG-YGGGS-GEGGGAGYGGGEAGGHGG 126
>gi|6437557|gb|AAF08584.1|AC011623_17 (AC011623) putative RNA
helicase [Arabidopsis thaliana]
Length = 1088
Score = 32.8 bits (73), Expect = 0.83
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 29 VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
V+ F +G GGTR GGG G G G +GG GG GG GF
Sbjct: 832 VNRFDSGG--GGTRWDSGGGFGGRGGGFSGREGGFGGREGGFGGREGGF 878
>gi|5174491|ref|NP_006112.1|| keratin 1 (epidermolytic
hyperkeratosis) >gi|1346343|sp|P04264|K2C1_HUMAN
KERATIN, TYPE II CYTOSKELETAL 1 (CYTOKERATIN 1) (K1) (CK
1) (67 KD CYTOKERATIN) (HAIR ALPHA PROTEIN) >gi|186772
(M98776) keratin 1 [Homo sapiens]
Length = 644
Score = 32.5 bits (72), Expect = 1.1
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNY 87
G ++ +GS GG RGG GGG G G GG +GG G G K+ +
Sbjct: 574 GHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGV---KSSGGSS 630
Query: 88 AVGFYNSLFNG 98
+V F ++ ++G
Sbjct: 631 SVRFVSTTYSG 641
Score = 30.5 bits (67), Expect = 4.2
Identities = 20/51 (39%), Positives = 22/51 (42%), Gaps = 1/51 (1%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
+G F G GG GG G G G G G G GG GG GG G+
Sbjct: 94 YGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGG-GGYGGGY 143
Score = 30.5 bits (67), Expect = 4.2
Identities = 17/34 (50%), Positives = 18/34 (52%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GG+RGG GGG GS G YG GG GG
Sbjct: 515 GGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGG 548
Score = 30.1 bits (66), Expect = 5.5
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
GS +GG GG G G G G G G + GG GG G GF
Sbjct: 87 GSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGF 129
Score = 29.7 bits (65), Expect = 7.2
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGD--GGGILGVGSIAQGVGMVYGGIVGGIG 71
GG + I + G + F G GG GG GGG G G I G +G GG G
Sbjct: 71 GGSKSISISVARGGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFG 130
Query: 72 G 72
G
Sbjct: 131 G 131
>gi|2496502|sp|Q50630|YP91_MYCTU HYPOTHETICAL PE-PGRS FAMILY PROTEIN
RV2591 >gi|1478221|emb|CAB01283| (Z77724) PE_PGRS
[Mycobacterium tuberculosis]
Length = 543
Score = 32.5 bits (72), Expect = 1.1
Identities = 19/58 (32%), Positives = 28/58 (47%), Gaps = 1/58 (1%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRG-GDGGGILGVGSIAQGVGMVYGGIVGG 69
+GGD +++ G G + GG+ G G GG G G+ G+G GG +GG
Sbjct: 361 TGGDGGLGGAGAVLIGTGVGGFGGLGGGSNGTGGAGGAGGTGATLIGLGAGGGGGIGG 418
Score = 30.5 bits (67), Expect = 4.2
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWG-GTRGGDGGGILGVGSIAQGVGMVYGGIVGGIG 71
+ GD ++S + G + +G + G G G GG+ G G++ G G VGG G
Sbjct: 330 NAGDGGAGGDSSALIGYAQGGSGGLGGFGESTGGDGGLGGAGAVLIGTG------VGGFG 383
Query: 72 GLIAG 76
GL G
Sbjct: 384 GLGGG 388
>gi|2911020|emb|CAA17513| (AL021958) PE_PGRS [Mycobacterium
tuberculosis]
Length = 783
Score = 32.5 bits (72), Expect = 1.1
Identities = 22/54 (40%), Positives = 29/54 (52%), Gaps = 11/54 (20%)
Query: 34 AGSIWGGTRGGDGGGILGVGSI-----AQGVGMVYG----GIVGGIGGLIAGFV 78
A ++ GGT G GGG+ G+ A G G+V G G GG GGL+AG +
Sbjct: 563 ASTVLGGT--GGGGGVGGLWGAGGAGGAGGTGLVGGDGGAGGAGGTGGLLAGLI 614
Score = 30.9 bits (68), Expect = 3.2
Identities = 24/73 (32%), Positives = 31/73 (41%), Gaps = 16/73 (21%)
Query: 22 EASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSI--------------AQGVGMVYGGI- 66
EA G + G+ G GG G G G G + A G+G V GG+
Sbjct: 191 EAGGAGGSGGWLLGTGGVGGVGGLGAGAGGAGGVGGAGGLLGAGGHGGAGGLGAVTGGVG 250
Query: 67 -VGGIGGLIAGFV 78
GG GGL+AG +
Sbjct: 251 GTGGAGGLLAGLL 263
>gi|3877532|emb|CAB01210.1| (Z77663) predicted using Genefinder;
Similarity to Silk moth chorion protein (SW:CHB1_BOMMO)
[Caenorhabditis elegans]
Length = 94
Score = 32.5 bits (72), Expect = 1.1
Identities = 23/59 (38%), Positives = 30/59 (49%), Gaps = 8/59 (13%)
Query: 24 SIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG-----GIVGGIGGLIAGF 77
S+ G + G ++GG GG G G G G G+GM G G VGG+GGL G+
Sbjct: 16 SLASGQYGVYPG-MYGGGYGGYGYG--GYGGYGTGLGMYNGLGYGLGGVGGLGGLGGGY 71
>gi|6434581|emb|CAB60949.1| (AL132898) predicted using Genefinder;
preliminary prediction [Caenorhabditis elegans]
Length = 180
Score = 32.5 bits (72), Expect = 1.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 17 LATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
L T + A+++ V++ A S+ GG GG G + V + GV G + GG+GG G
Sbjct: 52 LVTELLATVLKLVTSL-ASSV-GGVAGGATGSLGAVTGVVDGVTGTVGDLTGGLGGATGG 109
>gi|6434583|emb|CAB60951.1| (AL132898) predicted using Genefinder;
preliminary prediction [Caenorhabditis elegans]
Length = 258
Score = 32.5 bits (72), Expect = 1.1
Identities = 20/61 (32%), Positives = 32/61 (51%), Gaps = 2/61 (3%)
Query: 16 DLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIA 75
+L T + A+++ V++ A S+ GG GG G + V + GV G + GG+GG
Sbjct: 51 ELVTGLLATVLELVTSL-ASSV-GGVAGGATGSLGAVTGVVDGVTGTVGDLTGGLGGATG 108
Query: 76 G 76
G
Sbjct: 109 G 109
Score = 31.7 bits (70), Expect = 1.9
Identities = 15/37 (40%), Positives = 19/37 (50%)
Query: 37 IWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
I GG GG G + G+ G+ GG GG+GGL
Sbjct: 180 ILGGATGGATGALGGLTGTVGGLTNALGGATGGLGGL 216
Score = 30.9 bits (68), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG GG G + G+ G+ GG GG+GGL
Sbjct: 104 GGATGGATGALGGLTGTVGGLTNALGGATGGLGGL 138
Score = 29.3 bits (64), Expect = 9.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG GG G+G ++ +G GG GG+GG+
Sbjct: 200 GGLTNALGGATGGLGGLSGILGGAAGGATGGLGGI 234
>gi|121644|sp|P17816|GRP_HORVU GLYCINE-RICH CELL WALL STRUCTURAL
PROTEIN PRECURSOR >gi|100582|pir||S10334 glycine-rich
protein precursor - barley >gi|295808|emb|CAA36811|
(X52580) glycine-rich protein [Hordeum vulgare]
Length = 200
Score = 32.1 bits (71), Expect = 1.4
Identities = 23/52 (44%), Positives = 24/52 (45%), Gaps = 2/52 (3%)
Query: 28 GVSAFF--AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
GV FF G G RGG GGG G G G G Y G GG GG G+
Sbjct: 38 GVENFFHGGGGHHGHGRGGHGGGGYGGGGGYGGGGGGYPGGGGGYGGGGGGY 89
>gi|88047|pir||A24843 keratin, 46K type I cytoskeletal - human
Length = 470
Score = 32.1 bits (71), Expect = 1.4
Identities = 22/51 (43%), Positives = 25/51 (48%), Gaps = 2/51 (3%)
Query: 29 VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG--IGGLIAGF 77
VS+ F+ G GG GGG S G G YGG +G GGL AGF
Sbjct: 50 VSSRFSSGGACGLGGGYGGGFSSSSSFGSGFGGGYGGGLGAGFGGGLGAGF 100
Score = 30.5 bits (67), Expect = 4.2
Identities = 22/76 (28%), Positives = 33/76 (42%), Gaps = 6/76 (7%)
Query: 6 SIEMNNVSGGDLATRIEASIVFGVSAFFAG-----SIWGGTRGGDGGGILGVGSIAQGVG 60
S + G +++R + G+ + G S +G GG GG LG G G+G
Sbjct: 39 SCPASTYGGASVSSRFSSGGACGLGGGYGGGFSSSSSFGSGFGGGYGGGLGAG-FGGGLG 97
Query: 61 MVYGGIVGGIGGLIAG 76
+GG G GL+ G
Sbjct: 98 AGFGGGFAGGDGLLVG 113
>gi|1363944|pir||JC4313 type I keratin 16 - human
>gi|1195531|bbs|172338 (S79867) type I keratin 16, K16
[human, epidermal keratinocytes, Peptide, 473 aa] [Homo
sapiens]
Length = 473
Score = 32.1 bits (71), Expect = 1.4
Identities = 22/51 (43%), Positives = 25/51 (48%), Gaps = 2/51 (3%)
Query: 29 VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG--IGGLIAGF 77
VS+ F+ G GG GGG S G G YGG +G GGL AGF
Sbjct: 52 VSSRFSSGGACGLGGGYGGGFSSSSSFGSGFGGGYGGGLGAGFGGGLGAGF 102
>gi|1769895|emb|CAA65416| (X96598) CaLB protein [Arabidopsis
thaliana]
Length = 493
Score = 32.1 bits (71), Expect = 1.4
Identities = 20/58 (34%), Positives = 32/58 (54%), Gaps = 3/58 (5%)
Query: 20 RIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
R++ + V G + G + G G G G++G G I GVG+V G+ G+G + +GF
Sbjct: 395 RLKEAGVIGSTMDAVGMVGSGL--GAGVGMVGTG-IGTGVGLVGSGVSSGVGMVGSGF 449
>gi|1916930 (U88570) CREB-binding protein homolog [Drosophila
melanogaster]
Length = 3190
Score = 32.1 bits (71), Expect = 1.4
Identities = 20/67 (29%), Positives = 31/67 (45%), Gaps = 1/67 (1%)
Query: 9 MNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVG 68
MN ++ G+L + + V G + GG GGG++ S+ G G GG+
Sbjct: 215 MNTIAQGNLGNMVLTNSVGGGMGGMVNHL-KQQPGGGGGGMINSVSVPGGPGAGAGGVGA 273
Query: 69 GIGGLIA 75
G GG +A
Sbjct: 274 GGGGAVA 280
Score = 30.1 bits (66), Expect = 5.5
Identities = 15/32 (46%), Positives = 19/32 (58%), Gaps = 1/32 (3%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGG 65
AG+ G GG GG++GVG + G G V GG
Sbjct: 3027 AGNFNAGGAGG-AGGVVGVGGVPGGAGTVPGG 3057
>gi|2739487 (AF026847) abductin [Argopecten irradians]
Length = 131
Score = 32.1 bits (71), Expect = 1.4
Identities = 18/43 (41%), Positives = 23/43 (52%), Gaps = 1/43 (2%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G + GG G GG+ G+G G G + GG GG+GG GF
Sbjct: 31 GGMGGGMNAGGFGGMGGMGGGKGGFGGI-GGFGGGMGGGPGGF 72
Score = 30.9 bits (68), Expect = 3.2
Identities = 17/39 (43%), Positives = 20/39 (50%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
GG GG GGG G G + GM G GG+G + GF
Sbjct: 59 GGFGGGMGGGPGGFGGMGGFGGMAAKGGFGGMGSGMGGF 97
Score = 30.9 bits (68), Expect = 3.2
Identities = 19/45 (42%), Positives = 23/45 (50%), Gaps = 3/45 (6%)
Query: 34 AGSIWG-GTRGGDGGGILGVGSIAQGVGMVYGGI--VGGIGGLIA 75
AG G G GG GG G+G G+G GG +GG GG+ A
Sbjct: 39 AGGFGGMGGMGGGKGGFGGIGGFGGGMGGGPGGFGGMGGFGGMAA 83
Score = 29.7 bits (65), Expect = 7.2
Identities = 23/56 (41%), Positives = 28/56 (49%), Gaps = 8/56 (14%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQ-----GVGMVYGGIVGGIGGLIAGF 77
FG F G + GG G GG+ G G +A G+G GG GG+GG AGF
Sbjct: 55 FGGIGGFGGGMGGGP--GGFGGMGGFGGMAAKGGFGGMGSGMGGF-GGMGGGNAGF 107
>gi|5031837|ref|NP_005548.1|| keratin 16 (focal non-epidermolytic
palmoplantar keratoderma)
>gi|1346342|sp|P08779|K1CX_HUMAN KERATIN, TYPE I
CYTOSKELETAL 17 (CYTOKERATIN 17) (K17) (CK 17) (VERSION
2) >gi|186685 (M28439) keratin type 16 [Homo sapiens]
Length = 470
Score = 32.1 bits (71), Expect = 1.4
Identities = 22/51 (43%), Positives = 25/51 (48%), Gaps = 2/51 (3%)
Query: 29 VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG--IGGLIAGF 77
VS+ F+ G GG GGG S G G YGG +G GGL AGF
Sbjct: 50 VSSRFSSGGACGLGGGYGGGFSSSSSFGSGFGGGYGGGLGAGFGGGLGAGF 100
Score = 30.5 bits (67), Expect = 4.2
Identities = 22/76 (28%), Positives = 33/76 (42%), Gaps = 6/76 (7%)
Query: 6 SIEMNNVSGGDLATRIEASIVFGVSAFFAG-----SIWGGTRGGDGGGILGVGSIAQGVG 60
S + G +++R + G+ + G S +G GG GG LG G G+G
Sbjct: 39 SCPASTYGGASVSSRFSSGGACGLGGGYGGGFSSSSSFGSGFGGGYGGGLGAG-FGGGLG 97
Query: 61 MVYGGIVGGIGGLIAG 76
+GG G GL+ G
Sbjct: 98 AGFGGGFAGGDGLLVG 113
>gi|4091879 (AF061812) keratin 16 [Homo sapiens]
>gi|4321795|gb|AAD15829| (AF061809) keratin 16 [Homo
sapiens]
Length = 473
Score = 32.1 bits (71), Expect = 1.4
Identities = 22/51 (43%), Positives = 25/51 (48%), Gaps = 2/51 (3%)
Query: 29 VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG--IGGLIAGF 77
VS+ F+ G GG GGG S G G YGG +G GGL AGF
Sbjct: 52 VSSRFSSGGACGLGGGYGGGFSSSSSFGSGFGGGYGGGLGAGFGGGLGAGF 102
>gi|5081699|gb|AAD39495.1|AF145799_1 (AF145799) immunogenic 23 kDa
lipoprotein PG3 [Porphyromonas gingivalis]
Length = 223
Score = 32.1 bits (71), Expect = 1.4
Identities = 24/65 (36%), Positives = 31/65 (46%), Gaps = 9/65 (13%)
Query: 26 VFGVSAFFAGS-----IWGGTRGGDGGGIL--GVGSIA--QGVGMVYGGIVGGIGGLIAG 76
V V+ FAG GG G GG + GVG++A VG + G VGG G + G
Sbjct: 10 VLAVALVFAGCGLNNMAKGGLIGAGVGGAIGAGVGNVAGNTAVGAIVGTAVGGAAGALIG 69
Query: 77 FVLDK 81
+DK
Sbjct: 70 KKMDK 74
>gi|125100|sp|P04261|K2C3_BOVIN KERATIN, TYPE II CYTOSKELETAL 60 KD,
COMPONENT III >gi|89633|pir||A02947 keratin, 60K type II
cytoskeletal, component III - bovine (fragment)
>gi|163253 (K03535) cytokeratin type II, component III
[Bos taurus]
Length = 182
Score = 31.7 bits (70), Expect = 1.9
Identities = 23/67 (34%), Positives = 31/67 (45%), Gaps = 20/67 (29%)
Query: 6 SIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGG 65
S+ N VS G +G + F G + GG GG GGG+ G G+G GG
Sbjct: 74 SVVTNTVSSG-----------YGGGSGFGGGLGGGLGGGLGGGLGG------GLG---GG 113
Query: 66 IVGGIGG 72
+ G+GG
Sbjct: 114 LGSGLGG 120
>gi|2498469|sp|Q47279|HRPN_ERWCA HARPIN (HARPIN-ECC) >gi|1381104
(L78834) putative [Erwinia carotovora]
Length = 356
Score = 31.7 bits (70), Expect = 1.9
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVG--MVYGGIVGGIG 71
GG + E + F GS+ GG G GG+ G+GS G+G ++ GG+ GG+G
Sbjct: 41 GGQRSNIAEQLSDIMTTMMFMGSMMGG---GMSGGLGGLGSSLGGLGGGLLGGGLGGGLG 97
Score = 30.5 bits (67), Expect = 4.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Query: 39 GGTRGGDGGGILGVG-------SIAQGVGMVYGGIVGGIGG 72
G + GG GGG+LG G S+ G+G GG +GG G
Sbjct: 77 GSSLGGLGGGLLGGGLGGGLGSSLGSGLGSALGGGLGGALG 117
>gi|2829589|sp|P71933|YQ34_MYCTU HYPOTHETICAL PE-PGRS FAMILY PROTEIN
RV2634C >gi|1550675|emb|CAB02341| (Z80225) PE_PGRS
[Mycobacterium tuberculosis]
Length = 778
Score = 31.7 bits (70), Expect = 1.9
Identities = 30/90 (33%), Positives = 36/90 (39%), Gaps = 5/90 (5%)
Query: 14 GGD-LATRIEASIVFGVSAFFAGSIWGGTRGGDGGGIL--GVGSIAQGVGMVYGGIVGGI 70
GGD L A V G + G+ G GG G L G G + G++ G GG
Sbjct: 172 GGDGLVGSGAAGGVGGRGGWLLGNGGTGGAGGAAGATLVGGTGGVGGATGLIGSGGFGGA 231
Query: 71 GGLIAGFVLDKNVTYNYAVG--FYNSLFNG 98
GG AG V + VG F N F G
Sbjct: 232 GGAAAGVGTTGGVGGSGGVGGVFGNGGFGG 261
Score = 31.7 bits (70), Expect = 1.9
Identities = 21/61 (34%), Positives = 27/61 (43%), Gaps = 10/61 (16%)
Query: 28 GVSAFFAGSIWG----------GTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G +A FAG + G GT G GG+ G+G + GM G VGG GG
Sbjct: 564 GGAAGFAGGVGGAGGEGLTDGAGTAEGGTGGLGGLGGVGGTGGMGGSGGVGGNGGAAGSL 623
Query: 78 V 78
+
Sbjct: 624 I 624
Score = 31.7 bits (70), Expect = 1.9
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 39 GGTRGGDGG--GILGVGSIAQGVGMVYGGIVGGIGG 72
GGT GG GG G++G A G G G GG+GG
Sbjct: 688 GGTTGGSGGAGGLIGWAGAAGGTGAGGTGGQGGLGG 723
Score = 30.1 bits (66), Expect = 5.5
Identities = 23/58 (39%), Positives = 29/58 (49%), Gaps = 9/58 (15%)
Query: 28 GVSAFFAGSIWGGTRGGDG--GGILGVGSIAQGVGMVYG-------GIVGGIGGLIAG 76
G +A + G+ GG GGDG GG G G + G G V G G GG GG++ G
Sbjct: 272 GGAASYFGTGGGGGVGGDGAPGGDGGAGPLLIGNGGVGGLGGAGAAGGNGGAGGMLLG 329
Score = 29.7 bits (65), Expect = 7.2
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GV F G G GGDG G LG G G G GG GG++ G
Sbjct: 505 GVGDAFGGD---GGIGGDGNGALGAAGGNGGTGGAGGN--GGRGGMLIG 548
>gi|2131027|emb|CAB09322| (Z95890) PE_PGRS(wag22) [Mycobacterium
tuberculosis]
Length = 914
Score = 31.7 bits (70), Expect = 1.9
Identities = 20/61 (32%), Positives = 26/61 (41%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
SGG T + G + G+ G GG+ GG GVG ++ G GGIG
Sbjct: 420 SGGPAGTAAGGAGGAGGAPGLIGNGGNGGNGGESGGTGGVGGAGGNAVLIGNGGEGGIGA 479
Query: 73 L 73
L
Sbjct: 480 L 480
>gi|3257613|dbj|BAA30296| (AP000005) 743aa long hypothetical protein
[Pyrococcus horikoshii]
Length = 743
Score = 31.7 bits (70), Expect = 1.9
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 23 ASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQG---VGMVYGGI---VGGIGGLIAG 76
+SI V FF+ ++ GG G + G+ + ++ +G V+G + VG +GG + G
Sbjct: 55 SSITDSVKGFFS-TLKNNVLGGSAGALAGIWAASKAGAAIGSVFGPVGTLVGFVGGAVIG 113
Query: 77 FVLDKNV 83
+++ ++
Sbjct: 114 YIIGAHI 120
>gi|5917781|gb|AAD56037.1|AF182396_1 (AF182396) ammonium transporter
[Xanthomonas citri]
Length = 491
Score = 31.7 bits (70), Expect = 1.9
Identities = 19/58 (32%), Positives = 31/58 (52%), Gaps = 2/58 (3%)
Query: 29 VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG--GIVGGIGGLIAGFVLDKNVT 84
++ F+ + GG +GGD + VG A GVG+ G G+V +G ++A V V+
Sbjct: 414 LTGVFSAASLGGQKGGDYDIVHQVGIQALGVGITVGWIGVVSVVGFVVAKLVFGLRVS 471
>gi|4512332|dbj|BAA75244.1| (AB023657) tetracycline-resistance
protein [Escherichia coli]
Length = 93
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/58 (37%), Positives = 26/58 (43%)
Query: 18 ATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIA 75
A RI A I A I T G D G+ S GVGMV G + GG+ G I+
Sbjct: 4 AGRIVAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAIS 61
>gi|631604|pir||S42629 keratin K3 - rabbit >gi|425551|bbs|137969
(S65740) K3 keratin [rabbits, Peptide, 629 aa]
[Oryctolagus cuniculus] >gi|433958|emb|CAA52409|
(X74371) keratin K3 [Oryctolagus cuniculus]
Length = 629
Score = 31.3 bits (69), Expect = 2.4
Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 6 SIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG- 64
SI M+ +GG A FG GS +GG GG GG LG G G G +G
Sbjct: 71 SISMSVAAGGSRAGG------FGGGRSICGSGFGGGLGGGLGGGLGSG-FGGGFGGGFGG 123
Query: 65 -GIVGGIGG 72
G GG GG
Sbjct: 124 AGAFGGAGG 132
Score = 30.1 bits (66), Expect = 5.5
Identities = 26/77 (33%), Positives = 34/77 (43%), Gaps = 3/77 (3%)
Query: 2 RELTSIEMNNVSGGDLATRIEASIVFGVS--AFFAGSIWGGTRGGDGGGILGVGSIAQGV 59
R+L E + +SG + + + S+V S + AG GG GG GGG G G
Sbjct: 488 RKLLEGEESRMSG-ECQSAVSISVVNSSSTTSAAAGGYGGGYGGGYGGGFGVGGGAGSGF 546
Query: 60 GMVYGGIVGGIGGLIAG 76
G G GG GL G
Sbjct: 547 GRGGGSGFGGGSGLGGG 563
Score = 29.7 bits (65), Expect = 7.2
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSI-----AQGVGMVYGGIVGGIGG 72
G S GS +GG G GG LG GSI + G G GG +G GG
Sbjct: 556 GGSGLGGGSGFGGGSGLGGGSGLGGGSIGFSVGSSGFGSGSGGRIGVSGG 605
Score = 29.7 bits (65), Expect = 7.2
Identities = 16/45 (35%), Positives = 19/45 (41%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G+ G + G GG GGG G G+ G G GG GG
Sbjct: 100 GLGGGLGGGLGSGFGGGFGGGFGGAGAFGGAGGFGGAGGFGGPGG 144
>gi|113011|sp|P26967|AC20_TENMO ADULT-SPECIFIC CUTICULAR PROTEIN
ACP-20 PRECURSOR >gi|102879|pir||S23463 cuticular
protein ACP20 precursor, adult - yellow mealworm
>gi|10749|emb|CAA45057| (X63459) adult cuticular protein
[Tenebrio molitor]
Length = 208
Score = 31.3 bits (69), Expect = 2.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 40 GTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFV 78
G GG G G +G+G + G G+ G++GG GGL G +
Sbjct: 155 GGLGGVGLGGVGLGGVGLGGGLGGVGLLGGRGGLDRGIL 193
Score = 30.1 bits (66), Expect = 5.5
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
AG + GG G G G+ G+G GVG+ GG VG +GG
Sbjct: 17 AGVVVGGYGDGVGVGLGGLGGGLGGVGVGLGG-VGVVGG 54
>gi|71536|pir||KRHU2 keratin, 67K type II cytoskeletal - human
(fragment) >gi|386854 (M10938) type II keratin subunit
protein [Homo sapiens]
Length = 493
Score = 31.3 bits (69), Expect = 2.4
Identities = 17/34 (50%), Positives = 18/34 (52%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
GG+RGG GGG GS G YG GG GG
Sbjct: 364 GGSRGGGGGGYGSGGSSYGSGGCSYGSGGGGGGG 397
Score = 30.1 bits (66), Expect = 5.5
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNY 87
G ++ +GS GG RGG GGG G G GG GG G G K+ +
Sbjct: 423 GHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSSGGRGSSSGGV---KSSGGSS 479
Query: 88 AVGFYNSLFNG 98
+V F ++ ++G
Sbjct: 480 SVRFVSTSYSG 490
>gi|135549|sp|P02981|TCR3_ECOLI TETRACYCLINE RESISTANCE PROTEIN,
CLASS C (TETA(C)) >gi|72840|pir||YTEC32 tetracycline
resistance protein - Escherichia coli plasmid pBR322
>gi|208959 (J01749) tetracycline resistance protein
[Cloning vector pBR322] >gi|208978 (M98046) Tet [Cloning
vector] >gi|460953 (U07168) tetracycline efflux protein
[Cloning vector pUCP26] >gi|595991 (U17139) tetracycline
resistance protein [Cloning vector pSIT] >gi|732518
(U22104) tetracycline efflux protein [Cloning vector
pAComegaGm] >gi|833820|gb|AAB06690.1| (U25059) unnamed
protein product [Cloning vector pBBR1MCS-3] >gi|1051184
(U37692) Description: tetracyline resistance gene;
tetracycline resistance protein [Cloning vector lambda
TXF97] >gi|1052555|emb|CAA90509| (Z50148) pMin1,
tetracyclin-resistance protein [synthetic construct]
>gi|1052557|emb|CAA90510| (Z50149) pMin2
tetracyclin-resistance protein [synthetic construct]
>gi|1066307 (U39284) tetracycline resistance protein
[Cloning vector TLF97-1] >gi|1066311 (U39285)
tetracycline resistance protein [Cloning vector TLF97-2]
>gi|1066315 (U39286) tetracycline resistance protein
[Cloning vector TLF97-3] >gi|1197549 (U47102) TetR
[Cloning vector pALTER-Ex1] >gi|1197552 (U47103) TetR
[Cloning vector pALTER-Ex2]
>gi|1208492|dbj|BAA08269.1| (D45834) protein resposible
for tetracycline resistance [Size marker plasmid pKF339]
>gi|1335929|gb|AAB01166.1| (U54828) tetracycline efflux
protein [synthetic construct] >gi|1335935|gb|AAB01171.1|
(U54829) tetracycline efflux protein [synthetic
construct] >gi|1335940|gb|AAB01175.1| (U54830)
tetracycline efflux protein [synthetic construct]
>gi|2961147 (AF047519) tetracycline efflux protein
[Cloning vector pEX18Tc] >gi|3037076 (AF055345)
tetracycline-resistance protein [Francisella tularensis]
>gi|3135563 (AF061924) tetracycline resistance protein
[Plasposon pTnMod-OTc] >gi|3135566 (AF061925)
tetracycline resistance protein [Plasposon pTnMod-OTc']
>gi|3135573 (AF061927) tetracycline resistance protein
[Plasposon pTnMod-CmOTc] >gi|3135577 (AF061928)
tetracycline resistance protein [Plasposon
pTnMod-Cm'OTc] >gi|3135605 (AF062082) tetracycline
resistance protein class C [Cloning vector p34S-Tc]
>gi|6272577|gb|AAF06113.1|AF140576_2 (AF140576) Tet
protein [Integration vector mini-CTX1]
>gi|6272581|gb|AAF06116.1|AF140577_3 (AF140577) Tet
protein [Integration vector mini-CTX2]
>gi|6272585|gb|AAF06119.1|AF140578_3 (AF140578) Tet
protein [Integration vector mini-CTX-GFP]
>gi|6272589|gb|AAF06122.1|AF140579_3 (AF140579) Tet
protein [Integration vector mini-CTX-lacZ]
>gi|223759|prf||0909740A protein,tetracyclin resistance
[Escherichia coli]
Length = 396
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/58 (37%), Positives = 26/58 (43%)
Query: 18 ATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIA 75
A RI A I A I T G D G+ S GVGMV G + GG+ G I+
Sbjct: 101 AGRIVAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAIS 158
>gi|207852 (M20189) tet protein [artificial sequence]
Length = 396
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/58 (37%), Positives = 26/58 (43%)
Query: 18 ATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIA 75
A RI A I A I T G D G+ S GVGMV G + GG+ G I+
Sbjct: 101 AGRIVAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAIS 158
>gi|984918 (U35134) tetracycline resistance protein [Cloning vector
pBSL190] >gi|984921 (U35135) tetracycline resistance
protein [Cloning vector pBSL193]
Length = 396
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/58 (37%), Positives = 26/58 (43%)
Query: 18 ATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIA 75
A RI A I A I T G D G+ S GVGMV G + GG+ G I+
Sbjct: 101 AGRIVAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAIS 158
>gi|1236519 (U46855) tetracycline resistance protein [Cloning vector
pAS1-tet]
Length = 394
Score = 31.3 bits (69), Expect = 2.4
Identities = 22/58 (37%), Positives = 26/58 (43%)
Query: 18 ATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIA 75
A RI A I A I T G D G+ S GVGMV G + GG+ G I+
Sbjct: 101 AGRIVAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAIS 158
>gi|2181966|emb|CAB09452| (Z96071) PE_PGRS [Mycobacterium
tuberculosis]
Length = 487
Score = 31.3 bits (69), Expect = 2.4
Identities = 20/64 (31%), Positives = 25/64 (38%), Gaps = 5/64 (7%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGG-----GILGVGSIAQGVGMVYGGIVG 68
GG + G + G I G GGDGG G+ GVG ++ G G
Sbjct: 299 GGTGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGAGGNAMLIGHGGAG 358
Query: 69 GIGG 72
G GG
Sbjct: 359 GAGG 362
>gi|2314487|gb|AAD08364.1| (AE000633) H. pylori predicted coding
region HP1288 [Helicobacter pylori 26695]
Length = 132
Score = 31.3 bits (69), Expect = 2.4
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNV 83
G WGG GG GG GVG GG VGG G AG ++ +V
Sbjct: 54 GRFWGGAVGGAIGG---------GVGGAVGGAVGGPAGGWAGRLVGGSV 93
>gi|2352260 (AF000949) keratin [Canis familiaris]
Length = 786
Score = 31.3 bits (69), Expect = 2.4
Identities = 15/34 (44%), Positives = 17/34 (49%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVG 68
G +GG GG GGG G G G GGI+G
Sbjct: 101 GGGFGGFSGGSGGGFGGPGGFGSGFDSGAGGILG 134
Score = 30.5 bits (67), Expect = 4.2
Identities = 24/64 (37%), Positives = 27/64 (41%), Gaps = 7/64 (10%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
GG A G S F+G GG GG GGG G + G GG GG GG
Sbjct: 69 GGGSGGGFSAGSFGGHSRGFSGGSGGGFGGGFGGGF---GGFSGG----SGGGFGGPGGF 121
Query: 74 IAGF 77
+GF
Sbjct: 122 GSGF 125
>gi|4557725|ref|NP_000418.1|| loricrin
>gi|126389|sp|P23490|LORI_HUMAN LORICRIN
>gi|2144802|pir||A38743 loricrin - human >gi|187185
(M61120) loricrin [Homo sapiens] >gi|187187 (M94077)
loricrin [Homo sapiens]
Length = 316
Score = 31.3 bits (69), Expect = 2.4
Identities = 25/75 (33%), Positives = 33/75 (43%), Gaps = 8/75 (10%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGT----RGGDGGGILGVGSIAQGVGMVYGGIVGG 69
GG ++ GVS+ GS GG+ GG GG + G G G GG G
Sbjct: 149 GGFSGQAVQCQSYGGVSS--GGSSGGGSGCFSSGGGGGSVCGYSGGGSGGGSGCGG--GS 204
Query: 70 IGGLIAGFVLDKNVT 84
GG +G+V + VT
Sbjct: 205 SGGSGSGYVSSQQVT 219
Score = 30.1 bits (66), Expect = 5.5
Identities = 16/45 (35%), Positives = 20/45 (43%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G + G GG+ GG GGG +G G + Y G G GG
Sbjct: 55 GGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGG 99
Score = 29.7 bits (65), Expect = 7.2
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
SGG + + + V S S GG+ GG G G G G + G G G GG G
Sbjct: 205 SGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSG--GSGCFSSGGGGGSSGCGGGSSG 262
Query: 73 LIAGFVL 79
+ +G ++
Sbjct: 263 IGSGCII 269
>gi|2661628|emb|CAA15735| (AL009198) PPE [Mycobacterium tuberculosis]
Length = 3716
Score = 31.3 bits (69), Expect = 2.4
Identities = 35/108 (32%), Positives = 50/108 (45%), Gaps = 21/108 (19%)
Query: 6 SIEMNNVSGGDL--ATRIEASIVFGVSAFFAGSIWGGTRG-GDGG---------GILGVG 53
++ + NV G+L A +I FG S AG+ G G G+ G G+ +G
Sbjct: 2589 NLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFANQGVRNIG 2648
Query: 54 SIAQGVGMVYGGIVG----GIGGLIAG---FVLDKNVTYNYAVGFYNS 94
G G + G+VG GIGGL +G L + T N +GF+NS
Sbjct: 2649 LANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGN--IGFFNS 2694
>gi|3077806|dbj|BAA25794| (AB013076) loricrin [Homo sapiens]
Length = 338
Score = 31.3 bits (69), Expect = 2.4
Identities = 25/75 (33%), Positives = 33/75 (43%), Gaps = 8/75 (10%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGT----RGGDGGGILGVGSIAQGVGMVYGGIVGG 69
GG ++ GVS+ GS GG+ GG GG + G G G GG G
Sbjct: 149 GGFSGQAVQCQSYGGVSS--GGSSGGGSGCFSSGGGGGSVCGYSGGGSGGGSGCGG--GS 204
Query: 70 IGGLIAGFVLDKNVT 84
GG +G+V + VT
Sbjct: 205 SGGSGSGYVSSQQVT 219
Score = 30.1 bits (66), Expect = 5.5
Identities = 16/45 (35%), Positives = 20/45 (43%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
G + G GG+ GG GGG +G G + Y G G GG
Sbjct: 55 GGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGG 99
>gi|3378364 (AF079317) sex pilus assembly and mating pair
stabilization protein [Sphingomonas aromaticivorans]
Length = 912
Score = 31.3 bits (69), Expect = 2.4
Identities = 23/57 (40%), Positives = 28/57 (48%), Gaps = 8/57 (14%)
Query: 8 EMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYG 64
E N+ S GD A+R FG SA GS GT G G I G G+ A G ++G
Sbjct: 625 EGNSRSSGDFASR-----TFGSSASLTGS---GTLGTPGKDIAGSGASATLQGSIFG 673
>gi|4155836 (AE001547) putative [Helicobacter pylori J99]
Length = 117
Score = 31.3 bits (69), Expect = 2.4
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNV 83
G WGG GG GG GVG GG VGG G AG ++ +V
Sbjct: 39 GRFWGGAVGGAIGG---------GVGGAMGGAVGGPAGGWAGRLVGGSV 78
>gi|401789 (L24206) ipiB1 [Phytophthora infestans]
>gi|741003|prf||2006269A ipiB1 gene [Phytophthora
infestans]
Length = 301
Score = 30.9 bits (68), Expect = 3.2
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 7/70 (10%)
Query: 27 FGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVG-----GIGGLIAGFV-LD 80
+G + G+ GG G+G G +GVG GVG GG G G+GG ++G V +
Sbjct: 109 YGGAGAGVGAGVGGAGVGNGYGGVGVGG-TTGVGAGVGGTTGVGAGAGVGGGVSGNVGVG 167
Query: 81 KNVTYNYAVG 90
V N AVG
Sbjct: 168 VGVGGNAAVG 177
Score = 30.5 bits (67), Expect = 4.2
Identities = 19/51 (37%), Positives = 25/51 (48%), Gaps = 1/51 (1%)
Query: 28 GVSAFFAGSIWGGTRGG-DGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G + G+ +GG G G G GVG+ G G YGG G+ G AG+
Sbjct: 59 GAGLYGRGAGYGGAGAGLYGRGAGGVGAGLYGRGAGYGGAGAGLFGRAAGY 109
Score = 30.5 bits (67), Expect = 4.2
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 16/74 (21%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGI-----------VGGIGGLIAG 76
G F + +GG G G G+ G G VG YGG+ VGG G+ AG
Sbjct: 99 GAGLFGRAAGYGGAGAGVGAGVGGAG-----VGNGYGGVGVGGTTGVGAGVGGTTGVGAG 153
Query: 77 FVLDKNVTYNYAVG 90
+ V+ N VG
Sbjct: 154 AGVGGGVSGNVGVG 167
Score = 30.5 bits (67), Expect = 4.2
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVG-----GIGG 72
GV A +G+ G GG GG G S GVG GG G G+GG
Sbjct: 193 GVGAGVSGNTGAGVGGGASGGANGGVSANAGVGGGVGGSAGVGGSVGVGG 242
Score = 29.3 bits (64), Expect = 9.4
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 26 VFGVSAFFAGSIWG--GTRGGDGGGILGVGS--IAQGVGMVYGGI-VGGIGGLIAG 76
++G A + G+ G G G GG GVG+ GVG YGG+ VGG G+ AG
Sbjct: 88 LYGRGAGYGGAGAGLFGRAAGYGGAGAGVGAGVGGAGVGNGYGGVGVGGTTGVGAG 143
Score = 29.3 bits (64), Expect = 9.4
Identities = 20/52 (38%), Positives = 26/52 (49%), Gaps = 3/52 (5%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVG-GIGGLIAGFV 78
GV A G+ G G GGG+ G++ GVG+ VG G+GG G V
Sbjct: 139 GVGAGVGGTTGVGAGAGVGGGV--SGNVGVGVGVGGNAAVGAGVGGAANGGV 188
>gi|3915091|sp|Q90502|TBFG_EPTST THREAD BIOPOLYMER FILAMENT GAMMA
SUBUNIT >gi|885928 (U20546) intermediate filament
[Eptatretus stouti]
Length = 603
Score = 30.9 bits (68), Expect = 3.2
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 23 ASIVFGVSAFFAGSIWGGTRGGDGG-GILGVGSIAQGVGMVYGGIVGGIGGLIAGFV 78
A + G +F GS G G G G +G+ S A G+ G GG GG ++G V
Sbjct: 42 AGLSMGGGSFRVGSAGIGGMGISSGIGGMGISSRAGGMSAYGGAASGGAGGFVSGGV 98
Score = 30.1 bits (66), Expect = 5.5
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 28 GVSAFFAG-SIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIG-GLIA 75
G+S+ G S +GG G GG + G G G GG +GG+ G++A
Sbjct: 71 GISSRAGGMSAYGGAASGGAGGFVSGGVPMLGYGGGAGGFIGGVSPGIMA 120
Score = 30.1 bits (66), Expect = 5.5
Identities = 21/66 (31%), Positives = 30/66 (44%), Gaps = 3/66 (4%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGG-TRGGDGGGILGVGSIAQGVGMVYGGIVGGI 70
V G L +S+ +G S+ G+I GG + GG G G + G GG G+
Sbjct: 490 VRSGTLGGASSSSVGYGASSTTLGAISGGYSTGGGASYSAGAGGASYSAGA--GGASYGV 547
Query: 71 GGLIAG 76
GG +G
Sbjct: 548 GGGYSG 553
>gi|1655664|emb|CAB03730| (Z81368) PE_PGRS [Mycobacterium
tuberculosis]
Length = 361
Score = 30.9 bits (68), Expect = 3.2
Identities = 19/54 (35%), Positives = 26/54 (47%), Gaps = 5/54 (9%)
Query: 28 GVSAFFAGSIWGGTRGGDG-GGILGVGSIAQGVGMVYG----GIVGGIGGLIAG 76
G ++ AG+ GG G G GG+ G+G G G G GG GG+ +G
Sbjct: 149 GGASDLAGTGRGGVGGAGGAGGLFGIGGAGGGCGSAVAIGGDGGAGGAGGVFSG 202
Score = 30.5 bits (67), Expect = 4.2
Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 15/78 (19%)
Query: 14 GGDLATRIEASIVFGVSAFFAGSIWGGTRGGDG-GGILGVGSIAQGVGMVYG-------- 64
GGD + G A AG GG+ G G GG+LG G A G G G
Sbjct: 188 GGDGGAGGAGGVFSGGGAGGAGDAIGGSGGAGGTGGLLGGGGGAGGAGGAGGNGGGASNS 247
Query: 65 ------GIVGGIGGLIAG 76
G GG GG++ G
Sbjct: 248 ASIGGDGGSGGAGGMLYG 265
>gi|2497721|sp|P55741|SLYB_ECOLI OUTER MEMBRANE LIPOPROTEIN SLYB
PRECURSOR >gi|1742707|dbj|BAA15402| (D90807) Outer
membrane lipoprotein PCP precursor. [Escherichia coli]
Length = 155
Score = 30.9 bits (68), Expect = 3.2
Identities = 21/64 (32%), Positives = 29/64 (44%), Gaps = 3/64 (4%)
Query: 8 EMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVG---SIAQGVGMVYG 64
++ NVS G + I G + G+I G GG G +G G S+A G V G
Sbjct: 36 QVQNVSYGTIVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAG 95
Query: 65 GIVG 68
G+ G
Sbjct: 96 GVAG 99
>gi|1787929 (AE000259) putative outer membrane protein
[Escherichia coli]
Length = 155
Score = 30.9 bits (68), Expect = 3.2
Identities = 21/64 (32%), Positives = 29/64 (44%), Gaps = 3/64 (4%)
Query: 8 EMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVG---SIAQGVGMVYG 64
++ NVS G + I G + G+I G GG G +G G S+A G V G
Sbjct: 36 QVQNVSYGTIVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAG 95
Query: 65 GIVG 68
G+ G
Sbjct: 96 GVTG 99
>gi|2661646|emb|CAA15752| (AL009198) PE_PGRS [Mycobacterium
tuberculosis]
Length = 588
Score = 30.9 bits (68), Expect = 3.2
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG 69
N +GGD A G +A AGS GG G G G G A G G G GG
Sbjct: 306 NGAAGGDGGANGGAGGAGGQAAS-AGSSVGGDGGNGGAGGTGTNGHAGGAGGAGG--AGG 362
Query: 70 IGGLIAG 76
GG + G
Sbjct: 363 RGGWLVG 369
>gi|2769728 (U92288) HN1 [Human herpesvirus 6]
Length = 279
Score = 30.9 bits (68), Expect = 3.2
Identities = 25/76 (32%), Positives = 33/76 (42%), Gaps = 11/76 (14%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG-IGGLIAGFVLDKNVTYN------ 86
AG + G+ GG GG+ G GS G GG GG GG G V D ++
Sbjct: 175 AGGLAEGSAGGPAGGLAG-GSAGGSAGGSAGGSAGGSAGGSAGGSVRDLGESFTQRFIRV 233
Query: 87 YAVGFYNS---LFNGT 99
+A+ S +F GT
Sbjct: 234 FAISLVRSFRFIFGGT 249
Score = 30.9 bits (68), Expect = 3.2
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQG-VGMVYGGIVGGIGGLIAG 76
AG GG+ GG GG G +A+G G GG+ GG G AG
Sbjct: 159 AGGPAGGSAGGSAGG--SAGGLAEGSAGGPAGGLAGGSAGGSAG 200
Score = 30.9 bits (68), Expect = 3.2
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
AG GG+ GG GG L GS G + GG GG G AG
Sbjct: 163 AGGSAGGSAGGSAGG-LAEGSAGGPAGGLAGGSAGGSAGGSAG 204
Score = 30.1 bits (66), Expect = 5.5
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
AG GG GG GG G GS G GG GG G AG
Sbjct: 55 AGGSAGGPAGGPAGGSAG-GSAGGSAGGSAGGPAGGSAGSSAG 96
Score = 29.7 bits (65), Expect = 7.2
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 34 AGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
AG GG+ GG GG G GS G GG GG G AG
Sbjct: 51 AGGSAGGSAGGPAGGPAG-GSAGGSAGGSAGGSAGGPAGGSAG 92
>gi|397687 (L23937) ipiB2 [Phytophthora infestans]
>gi|741004|prf||2006269B ipiB2 gene [Phytophthora
infestans]
Length = 343
Score = 30.9 bits (68), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (48%), Gaps = 1/51 (1%)
Query: 28 GVSAFFAGSIWGGTRGG-DGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
G + G+ +GG G G G GVG+ G G YGG G+ G AG+
Sbjct: 111 GAGLYGRGAGYGGAGAGLYGRGAGGVGAGLYGRGAAYGGAGAGLFGREAGY 161
Score = 30.5 bits (67), Expect = 4.2
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVG-----GIGG 72
GV A +G+ G GG GG G S GVG GG G G+GG
Sbjct: 235 GVGAGVSGNTGAGVGGGASGGANGGVSANAGVGGGVGGSAGVGGSVGVGG 284
Score = 29.3 bits (64), Expect = 9.4
Identities = 23/73 (31%), Positives = 30/73 (40%), Gaps = 10/73 (13%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGM---------VYGGI-VGGIGGLIAGF 77
G + G+ +GG G G G G GVG YGG+ VGG G+ AG
Sbjct: 137 GAGLYGRGAAYGGAGAGLFGREAGYGGAGAGVGAGVGGAGLGNGYGGVGVGGTTGVGAGA 196
Query: 78 VLDKNVTYNYAVG 90
+ V+ N G
Sbjct: 197 GVGGGVSGNVGAG 209
>gi|6647752|sp|O88569|ROA2_MOUSE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEINS A2/B1 (HNRNP A2 AND HNRNP B1)
>gi|3329498 (AF073993) heterogenous nuclear
ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 30.9 bits (68), Expect = 3.2
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 17/66 (25%)
Query: 33 FAGSI-WGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGF 91
F GS +GG RGG GGG G G+ G G Y GG NY G
Sbjct: 244 FGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGG----------------NYGSGT 287
Query: 92 YNSLFN 97
YN N
Sbjct: 288 YNDFGN 293
>gi|1079079|pir||S49194 GCR 17 protein - fruit fly (Drosophila
melanogaster) >gi|510502|emb|CAA50794| (X71974) GCR 17
[Drosophila melanogaster]
Length = 196
Score = 30.5 bits (67), Expect = 4.2
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 28 GVSAFFAGSIWGGTRGG-DGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYN 86
G+S G + GG GG GG G + G G GG G GG G+ + V
Sbjct: 64 GLSGGLGGKLGGGGGGGGYSGGYSNGGGYSGGGGYSGGGGYSGGGGYSGGYAAPRPVEKV 123
Query: 87 YAVGFYNSLFNGTFT 101
V N ++G ++
Sbjct: 124 VIVKVINEGYSGGYS 138
>gi|397689 (L23936) ipiB3 [Phytophthora infestans]
>gi|741005|prf||2006269C ipiB3 gene [Phytophthora
infestans]
Length = 347
Score = 30.5 bits (67), Expect = 4.2
Identities = 19/53 (35%), Positives = 23/53 (42%), Gaps = 3/53 (5%)
Query: 23 ASIVFGVSAFFAGSIWGGTRGGDGGGI---LGVGSIAQGVGMVYGGIVGGIGG 72
A + GVS + GG GG GG+ GVG G V G G+GG
Sbjct: 244 AGVGAGVSGNTGAGVGGGASGGANGGVSANAGVGGGVGGSAGVGGAASTGVGG 296
Score = 30.5 bits (67), Expect = 4.2
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 28 GVSAFFAGSIWGGTR----------GGDGGGI-LGVGSIAQGVGMVYGGI-VGGIGGLIA 75
G + G+ +GG GG G G+ GVG G+G YGG+ VGG G+ A
Sbjct: 147 GAGLYGRGAAYGGAGAGLFGREAGFGGAGAGVAAGVG--PAGLGNAYGGVGVGGTTGVGA 204
Query: 76 GFVLDKNVTYNYAVG 90
G + V+ N G
Sbjct: 205 GAGVGGGVSGNVGAG 219
Score = 29.7 bits (65), Expect = 7.2
Identities = 20/49 (40%), Positives = 25/49 (50%), Gaps = 3/49 (6%)
Query: 30 SAFFAGSIWGGTRGG-DGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGF 77
+ +AG +GG G G G GVG+ G G YGG G+ G AGF
Sbjct: 125 AGLYAG--YGGAGAGLYGRGAGGVGAGLYGRGAAYGGAGAGLFGREAGF 171
>gi|6324321|ref|NP_014391.1|SIS1| sit4 suppressor, dnaJ homolog;
Sis1p >gi|134509|sp|P25294|SIS1_YEAST SIS1 PROTEIN
>gi|101623|pir||A39660 heat shock protein SIS1 - yeast
(Saccharomyces cerevisiae) >gi|4474|emb|CAA41366|
(X58460) SIS1 protein [Saccharomyces cerevisiae]
>gi|1301824|emb|CAA95866| (Z71283) ORF YNL007c
[Saccharomyces cerevisiae]
Length = 352
Score = 30.5 bits (67), Expect = 4.2
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 14/73 (19%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDG--------GGILGVGSIAQGVGMVYG 64
SGG + +A +F S FF GS G G GG G+G + G+G
Sbjct: 101 SGGHAFSNEDAFNIF--SQFFGGSSPFGGADDSGFSFSSYPSGGGAGMGGMPGGMG---- 154
Query: 65 GIVGGIGGLIAGF 77
G+ GG+GG+ GF
Sbjct: 155 GMHGGMGGMPGGF 167
>gi|4504447|ref|NP_002128.1|| heterogeneous nuclear
ribonucleoprotein A2/B1 >gi|337449 (M29065) hnRNP A2
protein [Homo sapiens] >gi|500638 (U09123) hnRNP protein
A2 [Homo sapiens] >gi|565644|dbj|BAA06032| (D28877)
hnRNP A2 protein [Homo sapiens]
Length = 341
Score = 30.5 bits (67), Expect = 4.2
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 17/66 (25%)
Query: 33 FAGSI-WGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGF 91
F GS +GG RGG GGG G G+ G G Y GG NY G
Sbjct: 244 FGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGG----------------NYGSGN 287
Query: 92 YNSLFN 97
YN N
Sbjct: 288 YNDFGN 293
>gi|133257|sp|P22626|ROA2_HUMAN HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEINS A2/B1 (HNRNP A2 AND HNRNP B1)
>gi|106244|pir||B34504 heterogeneous nuclear
ribonucleoprotein B1 - human >gi|337453 (M29064) hnRNP
B1 protein [Homo sapiens] >gi|565643|dbj|BAA06031|
(D28877) hnRNP B1 protein [Homo sapiens]
Length = 353
Score = 30.5 bits (67), Expect = 4.2
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 17/66 (25%)
Query: 33 FAGSI-WGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGF 91
F GS +GG RGG GGG G G+ G G Y GG NY G
Sbjct: 256 FGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGG----------------NYGSGN 299
Query: 92 YNSLFN 97
YN N
Sbjct: 300 YNDFGN 305
>gi|2498986|sp|P76011|TAG1_ECOLI TRANSGLYCOSYLASE ASSOCIATED
PROTEIN >gi|1816655 (U85771) transglycosylase
associated gene [Escherichia coli]
Length = 84
Score = 30.5 bits (67), Expect = 4.2
Identities = 28/68 (41%), Positives = 34/68 (49%), Gaps = 16/68 (23%)
Query: 21 IEASIVFGVSAFFAGSIWGGTRGGDGGG-----ILGVGSIAQGVGMVYGGIVG---GIGG 72
I A I+FG+ A + G DGGG ILG+ VG V GG + GIGG
Sbjct: 3 IIAWIIFGLIAGIIAKLI--MPGRDGGGFFLTCILGI------VGAVVGGWLATMFGIGG 54
Query: 73 LIAGFVLD 80
I+GF LD
Sbjct: 55 SISGFNLD 62
>gi|3130032|emb|CAA19010| (AL023534) major facilitator family
transporter [Schizosaccharomyces pombe]
Length = 577
Score = 30.5 bits (67), Expect = 4.2
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 24/98 (24%)
Query: 15 GDLATRIEASIVFGVSAFFAG---SIWG-----GTRGGDGGGILGVGSIA---------- 56
G T + A VFG+ F G S+W G GGG+ SI
Sbjct: 152 GRKKTLLAAYCVFGIGCFLCGTSRSLWQLVAARAIAGIGGGGMNSTVSILMSDIVPLKQR 211
Query: 57 ---QGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGF 91
QG+ V+ I +GG + G+ D+ Y + +GF
Sbjct: 212 GTYQGIINVFFAIGSSLGGPVGGYFADQ---YTWRIGF 246
>gi|3876841|emb|CAA98477.1| (Z74033) similar to PH (pleckstrin
homology) domain; cDNA EST EMBL:D73339 comes from this
gene; cDNA EST EMBL:D76379 comes from this gene; cDNA
EST yk500e4.3 comes from this gene; cDNA EST yk444h8.3
comes from this gene; cDN...
Length = 407
Score = 30.5 bits (67), Expect = 4.2
Identities = 23/68 (33%), Positives = 30/68 (43%), Gaps = 15/68 (22%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMV------YGGIVGGIG----GLIAGFVLDKNVT 84
G +G T G G GIL + G+G + YGG GG G G+ G+ D + T
Sbjct: 240 GGGFGSTGLGFGSGILAGSLLGYGLGSMWGGHHSYGGWGGGYGGGGYGMAGGYYSDNDTT 299
Query: 85 -----YNY 87
YNY
Sbjct: 300 VTNNYYNY 307
>gi|5381308|gb|AAD42935.1|AF084543_3 (AF084543) glycoprotein B
[Tupaia herpesvirus]
Length = 944
Score = 30.5 bits (67), Expect = 4.2
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 51 GVGSIAQGVGMVYGGIVGGIGGLIAGFV 78
G+G+ +G+G+V G + G + ++ GFV
Sbjct: 752 GLGAAGKGLGLVLGAVGGAVASVVGGFV 779
>gi|5725166|dbj|BAA83164.1| (AB030825) PRF20; putative tail length
determinator protein; similar to yqbO gene of B.
subtilis [Pseudomonas aeruginosa]
Length = 745
Score = 30.5 bits (67), Expect = 4.2
Identities = 22/71 (30%), Positives = 33/71 (45%), Gaps = 8/71 (11%)
Query: 7 IEMNNVSGGDLATRIEASIVFG-VSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGG 65
I++ V DL+ E ++ +G AGS+ G G +GS+ VG + GG
Sbjct: 593 IDVAEVYSSDLSES-EKTVAYGEAGGSLAGSLAGAALGAS------IGSVVPVVGTLIGG 645
Query: 66 IVGGIGGLIAG 76
+VGG G G
Sbjct: 646 LVGGAIGAWGG 656
>gi|5734621|dbj|BAA83352.1| (AP000391) ESTs
AU067992(C11433),AU077424(C11433) correspond to a region
of the predicted gene.; Similar to ABC transporter-7
(U43892) [Oryza sativa]
Length = 936
Score = 30.5 bits (67), Expect = 4.2
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQG---VGMVYGGIVG 68
V ++A +E ++ V + + GGTRGG GGG G ++ GG G
Sbjct: 267 VDEAEVAEFVEMAVTVLVERRWRSRMSGGTRGGGGGGRGGEAALVDARRWWSRASGGAHG 326
Query: 69 GIGG 72
G GG
Sbjct: 327 GGGG 330
>gi|6273351|gb|AAF06330.1|AF192348_1 (AF192348) vitamin D response
element binding protein [Saguinus oedipus]
Length = 341
Score = 30.5 bits (67), Expect = 4.2
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 17/66 (25%)
Query: 33 FAGSI-WGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGF 91
F GS +GG RGG GGG G G+ G G Y GG NY G
Sbjct: 244 FGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGG----------------NYGSGN 287
Query: 92 YNSLFN 97
YN N
Sbjct: 288 YNDFGN 293
>gi|6939231|gb|AAF31733.1|AC020579_10 (AC020579) putative
RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 30.5 bits (67), Expect = 4.2
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 12 VSGGDL-ATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGI 70
+ G DL RI + + F G +GG GG G G G+ A G YGG GG
Sbjct: 94 LDGQDLHGRRIRVNYATERGSGFGGRGFGGPGGGYGASDGGYGAPAGG----YGGGAGGY 149
Query: 71 GG 72
GG
Sbjct: 150 GG 151
>gi|2497722|sp|Q53549|SLYB_SALTY OUTER MEMBRANE LIPOPROTEIN SLYB
PRECURSOR >gi|1246075|bbs|175128 (S80790) SlyB=outer
membrane lipoprotein PCP homolog [Salmonella
typhimurium, 14028s, Peptide, 155 aa] [Salmonella
typhimurium]
Length = 155
Score = 30.1 bits (66), Expect = 5.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 8 EMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVG---SIAQGVGMVYG 64
++ NV+ G + I G + G+I G GG G +G G S+A G V G
Sbjct: 36 QVQNVTYGTIVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTIGGGTGRSLATAAGAVAG 95
Query: 65 GIVG 68
G+ G
Sbjct: 96 GVAG 99
>gi|2094820|emb|CAB08573| (Z95324) hypothetical protein Rv0341
[Mycobacterium tuberculosis]
Length = 479
Score = 30.1 bits (66), Expect = 5.5
Identities = 20/67 (29%), Positives = 30/67 (43%), Gaps = 6/67 (8%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRG------GDGGGILGVGSIAQGVGMVYGGI 66
+GG + +I GV G+ G G G G G+ G IA +G+ GG
Sbjct: 182 AGGVIGGSAAGAIGAGVGGRLGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGGG 241
Query: 67 VGGIGGL 73
+GG+G +
Sbjct: 242 LGGVGNV 248
>gi|2193918|emb|CAB09596| (Z96800) PE_PGRS [Mycobacterium
tuberculosis]
Length = 591
Score = 30.1 bits (66), Expect = 5.5
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 13/69 (18%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFA----GSIWGGTRGGDGG--GILGVGSIAQGVGMVY 63
N +GGD + A+ + G G +W G GGDGG G+ GVG G
Sbjct: 404 NGGAGGDGGAGVSATDIAGTGGRGGNGGHGGLWIGN-GGDGGAGGVGGVG------GAGA 456
Query: 64 GGIVGGIGG 72
G +GG GG
Sbjct: 457 AGAIGGHGG 465
>gi|2315214|emb|CAA74748| (Y14390) Kv2 voltage-gated potassium
channel [Loligo pealei]
Length = 908
Score = 30.1 bits (66), Expect = 5.5
Identities = 17/52 (32%), Positives = 24/52 (45%), Gaps = 5/52 (9%)
Query: 14 GGDLATRIEASIVFGVSAFFAGS-----IWGGTRGGDGGGILGVGSIAQGVG 60
GG + ++V + AG + GG GG GGG+ G G + GVG
Sbjct: 139 GGSIQLAASPAVVQPTGSIVAGGNNNLPLQGGGGGGGGGGVGGGGVVGVGVG 190
>gi|2924444|emb|CAA17744| (AL022022) PE_PGRS [Mycobacterium
tuberculosis]
Length = 1381
Score = 30.1 bits (66), Expect = 5.5
Identities = 20/60 (33%), Positives = 24/60 (39%)
Query: 13 SGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGG 72
+GG+ A G+ A GGT G G G L +G G GG GG GG
Sbjct: 180 NGGNGGWLFGAGGTGGIGGTGAPGAMGGTGGNGGNGALLIGGGGLGGAGGMGGTGGGTGG 239
Score = 29.7 bits (65), Expect = 7.2
Identities = 27/68 (39%), Positives = 29/68 (41%), Gaps = 4/68 (5%)
Query: 27 FGVSAFFAGSIWGGTRGGDG--GGILGVGSIAQGVGMVYGGIVGGIGGL--IAGFVLDKN 82
FG +A GS G GGDG GG G G IA G G G G GG GF + N
Sbjct: 1276 FGGTAGNGGSGGTGGAGGDGGTGGDGGNGVIAGGGGTGGNGGASGAGGAGGTGGFAGNGN 1335
Query: 83 VTYNYAVG 90
N G
Sbjct: 1336 AGGNGGTG 1343
>gi|2924484|emb|CAA17724| (AL022021) PE_PGRS [Mycobacterium
tuberculosis]
Length = 639
Score = 30.1 bits (66), Expect = 5.5
Identities = 27/68 (39%), Positives = 31/68 (44%), Gaps = 5/68 (7%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGV-GMVYGGIVG 68
N SGG T E S G +A G+ G G GG GVG+I Q G G G
Sbjct: 470 NAGSGG--GTGFEGSAGQGGAAILIGNGGAGGNGATGG--TGVGNIIQEAGGDGSDGGAG 525
Query: 69 GIGGLIAG 76
G GGL+ G
Sbjct: 526 GSGGLLFG 533
>gi|3875569|emb|CAA92658.1| (Z68314) predicted using Genefinder
[Caenorhabditis elegans]
Length = 102
Score = 30.1 bits (66), Expect = 5.5
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 44 GDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGFYNSLFNG 98
G GGG G + G G+ YGG GG GG G+ L Y G Y +G
Sbjct: 35 GCGGGF---GGFSGGYGLGYGGGFGGYGGGFGGYGLG---GYGLGYGGYGMFGSG 83
>gi|5104335|dbj|BAA79650.1| (AP000060) 320aa long hypothetical
protein [Aeropyrum pernix]
Length = 320
Score = 30.1 bits (66), Expect = 5.5
Identities = 25/74 (33%), Positives = 33/74 (43%), Gaps = 11/74 (14%)
Query: 11 NVSGGDLATRIEASIVFGVSAFFAGSIWGGTR-----GGDGGGIL---GVGSIAQGVGMV 62
+V D A +EA+ F AG+ WGG G D I+ GV S+ G+ V
Sbjct: 85 SVKAYDAAAAVEAAAEFSEMVAVAGNGWGGYEKALDLGVDAAAIVVESGVASLEPGLARV 144
Query: 63 YG---GIVGGIGGL 73
G IVG GG+
Sbjct: 145 AGLGRLIVGSRGGV 158
>gi|5901697|gb|AAD55378.1|AF149712_6 (AF149712) TPP-dependent
branched-chain alpha-keto acid dehydrogenase, E1 beta
subunit [Enterococcus faecalis]
Length = 328
Score = 30.1 bits (66), Expect = 5.5
Identities = 26/87 (29%), Positives = 35/87 (39%), Gaps = 22/87 (25%)
Query: 1 MRELTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVG 60
M E+T +E N+ + R E ++FG GGD GG+ GV +G+
Sbjct: 1 MAEMTYLEAINLGISEEMARDEKVVIFGEDV-----------GGDKGGVFGV---TKGLA 46
Query: 61 MVYGG--------IVGGIGGLIAGFVL 79
YG G IGGL G L
Sbjct: 47 AKYGDERCFNTPLTEGLIGGLAVGLGL 73
>gi|929566|emb|CAA28903| (X05285) fibrillarin [Drosophila
melanogaster]
Length = 147
Score = 30.1 bits (66), Expect = 5.5
Identities = 18/38 (47%), Positives = 18/38 (47%)
Query: 39 GGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAG 76
GG RG GGG G G G G GG GG GG G
Sbjct: 27 GGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGG 64
Score = 30.1 bits (66), Expect = 5.5
Identities = 25/59 (42%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 33 FAGSIWGGTRGGDGGGILGV-GSIAQGVGMVYGGI------VGGIGGLIAGFVLDKNVT 84
F G GG RGG GGG G G G G GG GG GG GF K VT
Sbjct: 61 FGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFKGGKTVT 119
>gi|6760385|gb|AAF28325.1|AF204952_3 (AF204952) vp74 [Ectocarpus
siliculosus virus]
Length = 698
Score = 30.1 bits (66), Expect = 5.5
Identities = 23/70 (32%), Positives = 29/70 (40%)
Query: 3 ELTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMV 62
+L S+ N +GG + G G+ G + GG GGG G G G G
Sbjct: 431 KLDSLIQNAGTGGGTGGASGGASGGGGGGGTGGASGGASGGGGGGGTGGAGGGGGGGGGG 490
Query: 63 YGGIVGGIGG 72
GG GG GG
Sbjct: 491 GGGGGGGGGG 500
>gi|116071|sp|P22522|CEAV_ECOLI COLICIN V PRECURSOR (MICROCIN V
BACTERIOCIN) >gi|72833|pir||IKECV colicin V -
Escherichia coli plasmid ColV >gi|41179|emb|CAA40746|
(X57525) cvaC product [Escherichia coli] >gi|3132746
(AF062844) microcin V bacteriocin [Escherichia coli]
>gi|3132749 (AF062845) microcin V bacteriocin
[Escherichia coli] >gi|3132752 (AF062846) microcin V
bacteriocin [Escherichia coli] >gi|3132755 (AF062847)
microcin V bacteriocin [Escherichia coli] >gi|3132758
(AF062848) microcin V bacteriocin [Escherichia coli]
>gi|3132761 (AF062849) microcin V bacteriocin
[Escherichia coli] >gi|3132764 (AF062850) microcin V
bacteriocin [Escherichia coli] >gi|3132767 (AF062851)
microcin V bacteriocin [Escherichia coli] >gi|3132770
(AF062852) microcin V bacteriocin [Escherichia coli]
>gi|3132773 (AF062853) microcin V bacteriocin
[Escherichia coli] >gi|3132776 (AF062854) microcin V
bacteriocin [Escherichia coli] >gi|3132779 (AF062855)
microcin V bacteriocin [Escherichia coli] >gi|3132782
(AF062856) microcin V bacteriocin [Escherichia coli]
>gi|3132785 (AF062857) microcin V bacteriocin
[Escherichia coli] >gi|3132788 (AF062858) microcin V
bacteriocin [Escherichia coli]
>gi|3288161|emb|CAA11514| (AJ223631) colicin V
[Escherichia coli]
Length = 103
Score = 29.7 bits (65), Expect = 7.2
Identities = 29/91 (31%), Positives = 37/91 (39%), Gaps = 4/91 (4%)
Query: 1 MRELTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQ-GV 59
MR LT E+++VSGG I +I F AG I G GG I S +
Sbjct: 1 MRTLTLNELDSVSGGASGRDIAMAIGTLSGQFVAGGIGAAAGGVAGGAIYDYASTHKPNP 60
Query: 60 GMVYGGIVGGIGGLIAGFVLDKNVTYNYAVG 90
M G+ G I G + +NYA G
Sbjct: 61 AMSPSGLGGTIKQKPEGI---PSEAWNYAAG 88
>gi|125068|sp|P02537|K1C0_XENLA KERATIN 3, TYPE I CYTOSKELETAL 51 KD
(51 KD CYTOKERATIN) >gi|71530|pir||KRXL keratin 3, type
I, cytoskeletal (clone pUF1001) - African clawed frog
>gi|64491|emb|CAA68783| (Y00968) 51 kD cytokeratin type
I (AA 1-486) [Xenopus laevis] >gi|226164|prf||1413234A
cytokeratin I [Xenopus laevis]
Length = 486
Score = 29.7 bits (65), Expect = 7.2
Identities = 25/66 (37%), Positives = 28/66 (41%), Gaps = 2/66 (3%)
Query: 28 GVSAFFA-GSIWGGTRG-GDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTY 85
G+ F A G+ +GG G G G G G G A G G YGG GG G G
Sbjct: 43 GMGGFGACGAGYGGGAGYGGGAGGAGYGGGAGGGGAGYGGGFGGGSGAGYGGGFGGGAGG 102
Query: 86 NYAVGF 91
Y GF
Sbjct: 103 GYGGGF 108
Score = 29.7 bits (65), Expect = 7.2
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 28 GVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGL 73
G A + G GG+ G GGG G G G GG GG GG+
Sbjct: 75 GGGAGYGGGFGGGSGAGYGGGFGGGAGGGYGGGFG-GGFGGGAGGM 119
>gi|2916941|emb|CAA17579| (AL021999) PE_PGRS [Mycobacterium
tuberculosis]
Length = 457
Score = 29.7 bits (65), Expect = 7.2
Identities = 26/65 (40%), Positives = 29/65 (44%), Gaps = 12/65 (18%)
Query: 12 VSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDG--GGILGVGSIAQG--VGMVYGGIV 67
V+GGD T G G I G GGDG GG G S+A+ G GG
Sbjct: 213 VAGGDGGT--------GGVGGHGGLIGVGGHGGDGGTGGTGGAVSLARAGTAGGAGGGPA 264
Query: 68 GGIGG 72
GGIGG
Sbjct: 265 GGIGG 269
>gi|3868804|dbj|BAA34229| (AB013608) cytokeratin 17 [Mus musculus]
Length = 433
Score = 29.7 bits (65), Expect = 7.2
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 10 NNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQ----GVGMVYGG 65
+ + GG T S G AGS G+ G G LG S + G G YGG
Sbjct: 18 SGLGGGSSRTSCRLSGSLG-----AGSCRLGSASGLGSA-LGSNSYSSCYSFGTGSGYGG 71
Query: 66 IVGGIGGLIAG 76
GG+ GL+AG
Sbjct: 72 NFGGVDGLLAG 82
>gi|4262573|gb|AAD14701| (AF125952) contains similarity to
monocarboxylate transporters [Caenorhabditis elegans]
Length = 571
Score = 29.7 bits (65), Expect = 7.2
Identities = 17/39 (43%), Positives = 24/39 (60%), Gaps = 2/39 (5%)
Query: 54 SIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGFY 92
S A G+ MV+ GI +GG IA + K++T NY + FY
Sbjct: 493 SNAFGILMVFMGIGAVVGGPIAAQI--KDITGNYDISFY 529
>gi|4803739|dbj|BAA77512.1| (AB026847) cold-inducible RNA-binding
protein [Ciona intestinalis]
Length = 158
Score = 29.7 bits (65), Expect = 7.2
Identities = 26/68 (38%), Positives = 30/68 (43%), Gaps = 8/68 (11%)
Query: 9 MNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVG 68
+ N++ D+A R VS A S G GG GGG G G G G YGG G
Sbjct: 62 IENLNESDVAGR-------NVSVRQAQSKRDGGGGGRGGGGYGGGGYGGGGGGGYGG-GG 113
Query: 69 GIGGLIAG 76
G GG G
Sbjct: 114 GGGGRYGG 121
>gi|480017|pir||S36123 phosphotransferase system enzyme II (EC
2.7.1.69) factor II, mannitol-specific, cryptic -
Escherichia coli >gi|312763|emb|CAA51229| (X72677)
protein-N(pi)-phosphohistidine-sugar phosphotransferase
[Escherichia coli]
Length = 460
Score = 29.3 bits (64), Expect = 9.4
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQG-VGMVYGG-IVGGIGGLIAGFVLDKNVTYNYAVGF 91
G + GG RG GGI +G I + M G I+G +GGL+ +V DK + GF
Sbjct: 70 GHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSMIMGPLGGLVIKYV-DKALEKRIPAGF 127
>gi|113012|sp|P26968|AC22_TENMO ADULT-SPECIFIC CUTICULAR PROTEIN
ACP-22 PRECURSOR >gi|102877|pir||S16063 acp-22 protein -
yellow mealworm >gi|10751|emb|CAA42985| (X60455) acp-22
[Tenebrio molitor]
Length = 199
Score = 29.3 bits (64), Expect = 9.4
Identities = 23/63 (36%), Positives = 28/63 (43%), Gaps = 4/63 (6%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGFYNS 94
G +GG GG G G G +G G+ GG GG GG G +Y +GF S
Sbjct: 59 GRHYGGGGGGGGEGEEGREHELRGGGLELGGGGGGGGGGGGG----GGEGRHYEIGFGGS 114
Query: 95 LFN 97
FN
Sbjct: 115 HFN 117
>gi|100211|pir||S14984 glycine-rich protein (clone uA-3) - tomato
>gi|388258|emb|CAA39224| (X55695) glycine-rich protein
[Lycopersicon esculentum]
Length = 129
Score = 29.3 bits (64), Expect = 9.4
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 6 SIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGI--------LGVGSIAQ 57
++E++ G + ++ + G SA G +GG GG GGG G G
Sbjct: 26 ALELDGSEVGGFSLNVQEAKPRGDSAGGGGRGFGGRSGGRGGGRDSGGRFGGRGGGGRFG 85
Query: 58 GVGMVYGGIVGGIGGLIAG 76
G G GG GG GG G
Sbjct: 86 GGGRFGGGGRGGGGGRFGG 104
>gi|119856|sp|P22232|FBRL_XENLA FIBRILLARIN
>gi|2134062|pir||I51417 fibrillarin - African clawed
frog >gi|214144 (M28874) fibrillarin [Xenopus laevis]
Length = 323
Score = 29.3 bits (64), Expect = 9.4
Identities = 22/51 (43%), Positives = 23/51 (44%), Gaps = 2/51 (3%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNV 83
F G GG RGG GG G S G G GG GG GG GF + V
Sbjct: 40 FGGRGRGGDRGGRGGFRGGFSS--PGRGGPRGGGRGGFGGGRGGFGAGRKV 88
>gi|1709913|sp|P32059|PTYC_ECOLI PTS SYSTEM, MANNITOL
(CRYPTIC)-SPECIFIC IIBC COMPONENT (EIIBC-(C)MTL)
(MANNITOL (CRYPTIC)-PERMEASE IIBC COMPONENT)
(PHOSPHOTRANSFERASE ENZYME II, BC COMPONENT) >gi|882462
(U28377) protein-N(pi)-phosphohistidine-sugar
phosphotransferase [Escherichia coli] >gi|1789301
(AE000376) PTS system, mannitol-specific enzyme II
component, cryptic [Escherichia coli]
Length = 462
Score = 29.3 bits (64), Expect = 9.4
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQG-VGMVYGG-IVGGIGGLIAGFVLDKNVTYNYAVGF 91
G + GG RG GGI +G I + M G I+G +GGL+ +V DK + GF
Sbjct: 70 GHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSMIMGPLGGLVIKYV-DKALEKRIPAGF 127
>gi|1263283 (U47853) fibroin-1 [Araneus diadematus]
>gi|1589021|prf||2209442A fibroin:ISOTYPE=1 [Araneus
diadematus]
Length = 360
Score = 29.3 bits (64), Expect = 9.4
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 4 LTSIEMNNVSGGDLATRIEASIVFGVSAFFAGSIWGGTRGGDGGGILGVG-SIAQGVGMV 62
+T ++ + +T E+ +G +A F+G+ G G G G G G G G
Sbjct: 36 ITESTASSAASSASSTVTESIRTYGPAAIFSGAGAGAGVGVGGAGGYGQGYGAGAGAGAG 95
Query: 63 YGGIVGGIGGLIAGF 77
G GG GG G+
Sbjct: 96 AGAGAGGAGGYGQGY 110
>gi|1710627|sp|P51991|ROA3_HUMAN HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN A3 (HNRNP A3) (FBRNP) (D10S102)
Length = 379
Score = 29.3 bits (64), Expect = 9.4
Identities = 26/58 (44%), Positives = 29/58 (49%), Gaps = 8/58 (13%)
Query: 41 TRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNY-AVGFYNSLFN 97
+RGG GGG G G+ QG G YGG VGG G G D + NY G YN N
Sbjct: 285 SRGGYGGGGPGYGN--QGGG--YGGGVGGYDGYNEGGNFDGS---NYGGGGNYNDFGN 335
>gi|2392838 (AF011378) unknown [Bacteriophage sk1]
Length = 999
Score = 29.3 bits (64), Expect = 9.4
Identities = 23/89 (25%), Positives = 34/89 (37%), Gaps = 8/89 (8%)
Query: 11 NVSGGDLATRIEASIVFGVSAF-FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGG 69
N G +++ A F SA+ SIW G G V S+ GV GG
Sbjct: 783 NAVKGVVSSAFSAIGSFASSAWGVVSSIWSAVSGFFSGIFNAVRSVVSGVFSALGGFASN 842
Query: 70 IGGLIAGFVLDKNVTYNYAVGFYNSLFNG 98
G I G ++ F++ +F+G
Sbjct: 843 AWGAITGI-------FSGVADFFSGVFDG 864
>gi|345440|pir||S32224 acp-22 protein - yellow mealworm
>gi|288440|emb|CAA51290| (X72783) acp-22 [Tenebrio
molitor]
Length = 199
Score = 29.3 bits (64), Expect = 9.4
Identities = 23/63 (36%), Positives = 28/63 (43%), Gaps = 4/63 (6%)
Query: 35 GSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVLDKNVTYNYAVGFYNS 94
G +GG GG G G G +G G+ GG GG GG G +Y +GF S
Sbjct: 59 GRHYGGGGGGGGEGEEGREHELRGGGLELGGGGGGGGGGGGG----GGEGRHYEIGFGGS 114
Query: 95 LFN 97
FN
Sbjct: 115 HFN 117
>gi|4510397|gb|AAD21484.1| (AC006587) putative seed storage
protein (vicilin-like) [Arabidopsis thaliana]
Length = 511
Score = 29.3 bits (64), Expect = 9.4
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 33 FAGSIWGGTRGGDGGGILGVGSIAQGVGMVYGGIVGGIGGLIAGFVL 79
+ G+ GG GG GGG G +G G GG GG GG F++
Sbjct: 42 WGGAEGGGAWGGGGGGGGAWGGEGEGGGEWGGGGEGGGGGRRGWFMM 88
>gi|5901828|gb|AAD55422.1|AF181636_1 (AF181636) BcDNA.GH07269
[Drosophila melanogaster]
Length = 682
Score = 29.3 bits (64), Expect = 9.4
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 15/84 (17%)
Query: 28 GVSAFFAGSIWGGTRGG----DGGGILGVGSI---------AQGVGMVYGGIVGGIGGLI 74
G + + G + GG G GG+L G++ + G+G+ G I G +GG I
Sbjct: 320 GATYYPQGPVGGGLPAGATFLPAGGVLPAGAVYYPQAPQKSSSGLGLGTGLIAGALGGAI 379
Query: 75 AGFVLDKNVTYNYAVGFYNSLFNG 98
G L T+ V NS G
Sbjct: 380 LGHAL--TPTHTRVVESSNSYSGG 401
Database: nr
Posted date: Feb 20, 2000 12:20 AM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.320 0.145 0.429
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31676728
Number of Sequences: 457798
Number of extensions: 1493882
Number of successful extensions: 15621
Number of sequences better than 10.0: 363
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 10017
Number of HSP's gapped (non-prelim): 3820
length of query: 102
length of database: 140,871,481
effective HSP length: 48
effective length of query: 54
effective length of database: 118,897,177
effective search space: 6420447558
effective search space used: 6420447558
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)