BLASTP 2.0.10 [Aug-26-1999]
Query= XF-07G02-GL34
(863 letters)
Database: nr
457,798 sequences; 140,871,481 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|2804528|dbj|BAA24464| (D85082) YfiX [Bacillus subtilis] 237 3e-61
gi|2633167|emb|CAB12672| (Z99108) similar to hypothetical prote... 233 7e-60
gi|6643933|gb|AAF20821.1|AF199025_2 (AF199025) LpiA [Sinorhizob... 147 4e-34
gi|3024904|sp|Q55979|Y712_SYNY3 HYPOTHETICAL 35.1 KD PROTEIN SL... 132 2e-29
gi|3218336|emb|CAA19595| (AL023861) putative integral membrane ... 116 1e-24
gi|4808336|emb|CAB42750.1| (AL049841) putative membrane protein... 115 2e-24
gi|1838991|emb|CAB06635| (Z85982) lysX [Mycobacterium tuberculo... 98 4e-19
gi|3025003|sp|P75770|YBHN_ECOLI HYPOTHETICAL 35.9 KD PROTEIN IN... 88 3e-16
gi|2113903|emb|CAB08896| (Z95554) hypothetical protein Rv1619 [... 75 2e-12
gi|1510108|dbj|BAA02957| (D13800) ORF-1 [Agrobacterium tumefaci... 67 8e-10
gi|540994|pir||A36922 orf1 5'of acvB - Agrobacterium tumefaciens 65 3e-09
gi|2225983|emb|CAB10049| (Z97193) hypothetical protein Rv1877 [... 43 0.008
gi|4235528 (AF111221) NADH dehydrogenase subunit 2 [Cyprinella ... 40 0.072
gi|2128959|pir||B64499 hypothetical protein MJ1595 - Methanococ... 39 0.16
gi|5802054|gb|AAD51597.1| (AF114248) NADH dehydrogenase subunit... 38 0.28
gi|5835277|gnl|NCBI_MITO|ND2_10917 NADH dehydrogenase subunit 2... 38 0.48
gi|4235546 (AF111230) NADH dehydrogenase subunit 2 [Cyprinella ... 38 0.48
gi|4235534 (AF111224) NADH dehydrogenase subunit 2 [Cyprinella ... 37 0.82
gi|2621439 (AE000823) unknown [Methanobacterium thermoautotroph... 36 1.1
gi|5738796|emb|CAB52970.1| (AL109950) putative membrane-associa... 36 1.1
gi|6137290|sp|O32256|YVBV_BACSU HYPOTHETICAL 32.8 KD PROTEIN IN... 36 1.4
gi|5835626|gnl|NCBI_MITO|ND2_14000 NADH dehydrogenase subunit 2... 36 1.8
gi|4584466|emb|CAB40669.1| (AL049587) UvrA-like ABC transporter... 36 1.8
gi|461891|sp|Q02761|CYB_RHOSH CYTOCHROME B >gi|97506|pir||S1386... 35 2.4
gi|4454039|emb|CAA23036.1| (AL035394) putative Na+/H+-exchangin... 35 2.4
gi|6692096|gb|AAF24561.1|AC007764_3 (AC007764) F22C12.7 [Arabid... 35 2.4
gi|2960161|emb|CAA18059.1| (AL022121) hypothetical protein Rv37... 34 4.2
gi|5852327|gb|AAD54008.1|AF088856_7 (AF088856) IgiE [Vogesella ... 34 4.2
gi|3242279|emb|CAA16667| (AL021646) nuoL [Mycobacterium tubercu... 34 5.4
gi|3183075|sp|O06400|MENA_MYCTU PROBABLE 1,4-DIHYDROXY-2-NAPHTH... 34 5.4
gi|5852331|gb|AAD54011.1|AF088857_3 (AF088857) PecM [Vogesella ... 34 5.4
gi|477557|pir||A49201 type 5 adenylyl cyclase - mouse 34 7.1
gi|6671513|ref|NP_031431.1|| adenylate cyclase 6 >gi|231925|sp|... 34 7.1
gi|191727 (M96653) adenylyl cyclase, type 6 [Mus musculus] 34 7.1
gi|5834987|gnl|NCBI_MITO|ATP6_10422 ATP synthase F0 subunit 6 >... 34 7.1
gi|1131440|gb|AAC96464.1| (U42580) a96R [Paramecium bursaria Ch... 34 7.1
gi|2501375|sp|Q51881|NRTB_PHOLA NITRATE TRANSPORT PERMEASE PROT... 33 9.3
gi|2500938|sp|Q10286|ITR1_SCHPO MYO-INOSITOL TRANSPORTER 1 >gi|... 33 9.3
gi|1652921|dbj|BAA17839| (D90909) phosphate transport system pe... 33 9.3
gi|2440196|emb|CAB16718.1| (Z99532) myo-inositol transporter [S... 33 9.3
gi|3877553|emb|CAB07625.1| (Z93383) cDNA EST yk444e9.3 comes fr... 33 9.3
gi|5458515|emb|CAB50003.1| (AJ248286) PURINE-CYTOSINE PERMEASE ... 33 9.3
>gi|2804528|dbj|BAA24464| (D85082) YfiX [Bacillus subtilis]
Length = 610
Score = 237 bits (599), Expect = 3e-61
Identities = 178/620 (28%), Positives = 293/620 (46%), Gaps = 37/620 (5%)
Query: 259 LISTVPAGLGVFEWSML---KLLPHTPPSVVLAAALAYRITYYLLPTLIALTMAASSGLR 315
+IS VP G G F+ L + L + ++V + L YR+ Y +P ++ L AA
Sbjct: 1 MISLVPGGFGSFDLLFLLGMEQLGYHQEAIVTSIVL-YRLAYSFIPFILGLFFAAGDLTE 59
Query: 316 QPMR------------VSAGTAIAIWKTVRPWVPQ-IIALAVFAIGTILLVDGTLPTPKS 362
M+ + + + + V + Q ++L VF G I+L +LP +
Sbjct: 60 NTMKRLETNPRIAPAIETTNVLLVVQRAVLVRILQGSLSLIVFVAGLIVLASVSLPIDR- 118
Query: 363 RQEVAPLPLIETSHLLVSLG-----GIVLLLIGQGLQRRSHSAWLLALGICILLPPLALL 417
+ +P I LL+ G ++LL++ L +R+ ++ +A+ + + L
Sbjct: 119 ---LTVIPHIPRPALLLFNGLSLSSALILLILPIELYKRTKRSYTMAITALVGGFVFSFL 175
Query: 418 RGSHYSVSLWAGLTAVTLWMARREFYRQSALLDEAWSWRWLSNIGIVIVSTFWLVFFVYS 477
+G + S + V L + +++F R+ A ++ + + + + F++
Sbjct: 176 KGLNISAIFVLPMIIVLLVLLKKQFVREQASYTLGQLIFAVALFTVALFNYNLIAGFIWD 235
Query: 478 HVE-YSNDLWWEFATSGNAPRALRALLLICVCLIVFGMARLLHNARRPFTPASEAELQAL 536
++ ++ +TS + A++++ + ++F + + H +P ++ E
Sbjct: 236 RMKKVLRHEYFVHSTSHITHATIMAIIIVPLFFLIFTV--VYHKRTKPIGEKADPER--- 290
Query: 537 LPILANNKDTKAC--LAMTGDKALLHDPQKRSFVMMQRYGGSLIAMGDPIGPPEASIQLI 594
L N K A L GDK + ++ + L+ +GDP G E+ ++
Sbjct: 291 LAAFLNEKGGNALSHLGFLGDKRFYFSSDGNALLLFGKIARRLVVLGDPSGQRESFPLVL 350
Query: 595 WRFREVADRLGLRPVFYQVADNYWQNYLDLGMTMVKIGEEAIVDLEKFSLEGSTNAEMRQ 654
F A + G +FYQ+ Y D G K+GEEA VDL F+L G A +R
Sbjct: 351 EEFLNEAHQKGFSVLFYQIEREDMALYHDFGYNFFKLGEEAYVDLNTFTLTGKKKAGLRA 410
Query: 655 AFNKGKRLGLRFRILSEEEVRALMHRLRQISDEWLEEKGSEEKSFSLGNFDPIYLYRFPV 714
N+ +R F + A + L+QISDEWL K +EK FSLG FDP YL + P+
Sbjct: 411 INNRFEREEYTFHVDHPPFSDAFLEELKQISDEWLGSK--KEKGFSLGFFDPSYLQKAPI 468
Query: 715 AVIEHEAEQKIIAFANILKAQPGSNLSIDLMRYSQDAPNGTMDFLFVAMFLWGKEQGFQR 774
A +++ AE +I+AFAN++ +S+DLMRY DAPNG MD LF+ MFLW KE+G
Sbjct: 469 AYMKN-AEGEIVAFANVMPMYQEGEISVDLMRYRGDAPNGIMDALFIRMFLWAKEEGCTS 527
Query: 775 FSLGMAPLSGLAQHHLAGRWNRFANLIARHGERFYGFSGLRRFKAKFSPNWCPRYLAAPG 834
F++GMAPL+ + + RFA +I + Y FSGLR FK K+ P W +YLA
Sbjct: 528 FNMGMAPLANVGTAFTSFWSERFAAVIFNNVRYMYSFSGLRAFKEKYKPEWRGKYLAYRK 587
Query: 835 GMHLFAALLDVTRLISISPK 854
L + VTRLI S K
Sbjct: 588 NRSLSVTMFLVTRLIGKSKK 607
>gi|2633167|emb|CAB12672| (Z99108) similar to hypothetical proteins
[Bacillus subtilis]
Length = 606
Score = 233 bits (587), Expect = 7e-60
Identities = 175/616 (28%), Positives = 290/616 (46%), Gaps = 37/616 (6%)
Query: 263 VPAGLGVFEWSML---KLLPHTPPSVVLAAALAYRITYYLLPTLIALTMAASSGLRQPMR 319
+P G G F+ L + L + ++V + L YR+ Y +P ++ L AA M+
Sbjct: 1 MPGGFGSFDLLFLLGMEQLGYHQEAIVTSIVL-YRLAYSFIPFILGLFFAAGDLTENTMK 59
Query: 320 ------------VSAGTAIAIWKTVRPWVPQ-IIALAVFAIGTILLVDGTLPTPKSRQEV 366
+ + + + V + Q ++L VF G I+L +LP + +
Sbjct: 60 RLETNPRIAPAIETTNVLLVVQRAVLVRILQGSLSLIVFVAGLIVLASVSLPIDR----L 115
Query: 367 APLPLIETSHLLVSLG-----GIVLLLIGQGLQRRSHSAWLLALGICILLPPLALLRGSH 421
+P I LL+ G ++LL++ L +R+ ++ +A+ + + L+G +
Sbjct: 116 TVIPHIPRPALLLFNGLSLSSALILLILPIELYKRTKRSYTMAITALVGGFVFSFLKGLN 175
Query: 422 YSVSLWAGLTAVTLWMARREFYRQSALLDEAWSWRWLSNIGIVIVSTFWLVFFVYSHVE- 480
S + V L + +++F R+ A ++ + + + + F++ ++
Sbjct: 176 ISAIFVLPMIIVLLVLLKKQFVREQASYTLGQLIFAVALFTVALFNYNLIAGFIWDRMKK 235
Query: 481 YSNDLWWEFATSGNAPRALRALLLICVCLIVFGMARLLHNARRPFTPASEAELQALLPIL 540
++ +TS + A++++ + ++F + + H +P ++ E L
Sbjct: 236 VLRHEYFVHSTSHITHATIMAIIIVPLFFLIFTV--VYHKRTKPIGEKADPER---LAAF 290
Query: 541 ANNKDTKAC--LAMTGDKALLHDPQKRSFVMMQRYGGSLIAMGDPIGPPEASIQLIWRFR 598
N K A L GDK + ++ + L+ +GDP G E+ ++ F
Sbjct: 291 LNEKGGNALSHLGFLGDKRFYFSSDGNALLLFGKIARRLVVLGDPSGQRESFPLVLEEFL 350
Query: 599 EVADRLGLRPVFYQVADNYWQNYLDLGMTMVKIGEEAIVDLEKFSLEGSTNAEMRQAFNK 658
A + G +FYQ+ Y D G K+GEEA VDL F+L G A +R N+
Sbjct: 351 NEAHQKGFSVLFYQIEREDMALYHDFGYNFFKLGEEAYVDLNTFTLTGKKKAGLRAINNR 410
Query: 659 GKRLGLRFRILSEEEVRALMHRLRQISDEWLEEKGSEEKSFSLGNFDPIYLYRFPVAVIE 718
+R F + A + L+QISDEWL K +EK FSLG FDP YL + P+A ++
Sbjct: 411 FEREEYTFHVDHPPFSDAFLEELKQISDEWLGSK--KEKGFSLGFFDPSYLQKAPIAYMK 468
Query: 719 HEAEQKIIAFANILKAQPGSNLSIDLMRYSQDAPNGTMDFLFVAMFLWGKEQGFQRFSLG 778
+ AE +I+AFAN++ +S+DLMRY DAPNG MD LF+ MFLW KE+G F++G
Sbjct: 469 N-AEGEIVAFANVMPMYQEGEISVDLMRYRGDAPNGIMDALFIRMFLWAKEEGCTSFNMG 527
Query: 779 MAPLSGLAQHHLAGRWNRFANLIARHGERFYGFSGLRRFKAKFSPNWCPRYLAAPGGMHL 838
MAPL+ + + RFA +I + Y FSGLR FK K+ P W +YLA L
Sbjct: 528 MAPLANVGTAFTSFWSERFAAVIFNNVRYMYSFSGLRAFKEKYKPEWRGKYLAYRKNRSL 587
Query: 839 FAALLDVTRLISISPK 854
+ VTRLI S K
Sbjct: 588 SVTMFLVTRLIGKSKK 603
>gi|6643933|gb|AAF20821.1|AF199025_2 (AF199025) LpiA [Sinorhizobium
meliloti]
Length = 398
Score = 147 bits (367), Expect = 4e-34
Identities = 107/361 (29%), Positives = 175/361 (47%), Gaps = 22/361 (6%)
Query: 13 QSGWR----------RAIPVFISLLILGMALHALSGHFTNHGYHQIHLAFKAFTTWQIVL 62
Q+GWR A+ + + + G A+ H T + ++ A T+W+ V
Sbjct: 17 QTGWRLLLRRNQSYLTAVGTLVVIALFGAAIV----HLTAEVRYDDVVSALADTSWRSVA 72
Query: 63 TLVL--GLCSYACLVGFDWIGLQRTGKRPHPARVAITAFLAHTIGQTLGFAALTGGAVRL 120
T + GL S+ L +D L ++ A+VA+TA A+ +G T GF AL+GGA+R
Sbjct: 73 TAIFFTGL-SFLTLTFYDLGALDYIRRKLPYAQVALTAACAYAVGNTAGFGALSGGAIRY 131
Query: 121 RGYSKVGLSLIEIGQIVLMSTLGFIFGAWVLLGLALALEPATATPILPLDTLGIRSTGIA 180
R YS++GL +I ++V TL F G + L+L P+ LD +R+
Sbjct: 132 RSYSRLGLEPDDIARVVAFVTLAFGLGLVAVTCLSLLAVAEYVAPLTRLDAFWLRTIAAV 191
Query: 181 LLAAFLVMLWLVNSNGREFGIGRQRFWIPDRRTVLGVTALSIVELGLACAAFYVLLPSEA 240
+LA L ++ S+ E IGR +P RT ++ ++L + YVLLP+
Sbjct: 192 VLAGMLAIMVAARSS-HEISIGRITLRLPASRTTSRQFLITTLDLAASATVLYVLLPT-G 249
Query: 241 NTSFFGFIGLWLVAVVAGLISTVPAGLGVFEWSMLKLLPHTPP-SVVLAAALAYRITYYL 299
+ F+ ++ VAV G++S VPAGLGVFE ++ L H +L A + YR+ Y+L
Sbjct: 250 TIGWPAFLAIYCVAVGLGVLSHVPAGLGVFETVIVATLGHAADVDAILGALVLYRVIYHL 309
Query: 300 LPTLIALTMAASSGLRQPMRVSAGTAIAIWKTVRPWVPQIIALAVFAIGTILLVDGTLPT 359
LP LIA+ + +RQ A +++ + P ++A + +L++ PT
Sbjct: 310 LPLLIAIVVIIGIEVRQFTGHPAASSLR--RAGGRMTPLLLATLALVLALMLVLSSVTPT 367
Query: 360 P 360
P
Sbjct: 368 P 368
>gi|3024904|sp|Q55979|Y712_SYNY3 HYPOTHETICAL 35.1 KD PROTEIN
SLR0712 >gi|1006605|dbj|BAA10758| (D64005) hypothetical
protein [Synechocystis sp.]
Length = 322
Score = 132 bits (328), Expect = 2e-29
Identities = 85/286 (29%), Positives = 138/286 (47%), Gaps = 1/286 (0%)
Query: 17 RRAIPVFISLLILGMALHALSGHFTNHGYHQIHLAFKAFTTWQIVLTLVLGLCSYACLVG 76
++ P I + +++ A++ ++G+ + +F+ ++ L L +Y L G
Sbjct: 8 QKIAPAAIGACLFVLSIGAINSELHHYGWQNVLASFQGIVKTRLAGAFALMLINYIILTG 67
Query: 77 FDWIGLQRTGKRPHPARVAITAFLAHTIGQTLGFAALTGGAVRLRGYSKVGLSLIEIGQI 136
+D + + G+ + + F+++ I ++G A L+G A+R R Y +S I Q
Sbjct: 68 YDTLAMFYLGQSLPLTKTSFVGFVSYAISNSVGLALLSGSAIRYRLYQSWQVSAPIIAQA 127
Query: 137 VLMSTLGFIFGAWVLLGLALALEPATATPILPLDTLGIRSTGIALLAAFLVMLWLVNSNG 196
+ L F G + G+ ++P L L L + G LA + L + +
Sbjct: 128 IAFCNLSFWVGLLTVGGITFVVDPLQLPAFLHLPFLSVHPIGFTFLAIIGIYLLITGNLI 187
Query: 197 REFGIGRQRFWIPDRRTVLGVTALSIVELGLACAAFYVLLPSEANTSFFGFIGLWLVAVV 256
+ F IG+ + L L+ V+ LA YVLLP + SF GF G++L+A V
Sbjct: 188 KPFKIGQWQTPKIPFAVSLAQIGLTAVDWILASGILYVLLPGHHHLSFPGFFGIYLLAQV 247
Query: 257 AGLISTVPAGLGVFEWSMLKLLPHTPPSV-VLAAALAYRITYYLLP 301
AG+IS VP GLGVFE +L LL SV VL A LAYR+ YY +P
Sbjct: 248 AGIISNVPGGLGVFETVVLFLLTPKYSSVQVLGALLAYRVIYYWIP 293
>gi|3218336|emb|CAA19595| (AL023861) putative integral membrane
protein [Streptomyces coelicolor]
Length = 589
Score = 116 bits (287), Expect = 1e-24
Identities = 127/524 (24%), Positives = 226/524 (42%), Gaps = 56/524 (10%)
Query: 374 TSHLLVS--LGGIVLLLIGQGLQRRSHSAWLLAL---GICILLPPLAL-LRGSHYSVSLW 427
T +LL + G V + + ++RR +AW+L L G+ + L LA+ L W
Sbjct: 58 TPYLLTAGFFSGSVSVFLAVTMRRRKRAAWILNLVLAGLILALSALAMGLPVYRQHAQNW 117
Query: 428 AGLTAVTLWMA-----RREFYRQ----------SALLDEAWSWRWLSNIGIVIVSTF--- 469
+ ++A RREF+ + S + + L+ + + +T
Sbjct: 118 FSMFVTAFFVAALIGGRREFHAKGDRSNPKLAASVAVGGFLACSLLAAALVTVTNTDPDA 177
Query: 470 ----WLVFFVYSHVE-----YSNDLWWEFATSGNAPRALRALLLICVCLIVFGMARLLHN 520
+L + Y + Y + + + +T A + + I V L+++ R
Sbjct: 178 GRSDFLERWHYGALRMFSLAYDDIPFGDISTPNWANVLINVMSTILVLLVLYAAFR---- 233
Query: 521 ARRPFTPASEAELQALLPILANN--KDTKACLAMTGDKALLHDPQKRSFVMMQRYGGSLI 578
+RR + +L+ L +L + +D+ A+ DK+++ P ++ + + G +
Sbjct: 234 SRRAIDAMTPEDLRGLRALLERHGERDSLGYFALRCDKSVIWSPSGKAAITYRVVSGVSL 293
Query: 579 AMGDPIGPPEASIQLIWRFREVADRLGLRPVFYQVADNYWQNYLDLGMTMVKIGEEAIVD 638
A GDPIG PEA + I R+ A G P ++ Y G+ +++G+EAIVD
Sbjct: 294 ASGDPIGDPEAWPRAIDRWLAQAREYGWAPAVIGASEEGGTVYARHGLNALELGDEAIVD 353
Query: 639 LEKFSLEGSTNAEMRQAFNKGKRLGLRFRILSEEEVRAL-MHRLRQISDEWLEEKGSEEK 697
L +F+LEG +RQA+N+ +R G I +++ M L ++ DEW + +
Sbjct: 354 LSEFTLEGRAMRNVRQAYNRIERAGYSVWIRRHKDIPTQEMADLIRLVDEWRDSESERGF 413
Query: 698 SFSLGNF-DPIYLYRFPVAVIEHEAEQKIIAFANILKAQPGSNLSIDLMRYSQDAPNGTM 756
S +LG DP V + + + +++F LS+DLMR +D+ NG
Sbjct: 414 SMALGRLGDPQDGQCVMVLCHDGKRPRGLLSFV----PWGDDGLSLDLMRRDRDSENGLF 469
Query: 757 DFLFVAMFLWGKEQGFQRFSLGMAPLSGLAQHHL---AGRWNRFANLIARHGERFYGFSG 813
+F+ + + E G ++ SL A + + AG R + R++
Sbjct: 470 EFMVLKLIQQAGELGMRQLSLNFAMFRSVFERGSRLGAGPVLRLWRSLLSFFSRWWQIES 529
Query: 814 LRRFKAKFSPNWCPRYLAAPGGMHLFAALLDVTRLISISPKRRE 857
L R AK+ P W PRYL LF D+ R I+++ R E
Sbjct: 530 LYRANAKYRPIWEPRYL-------LFEKSADLLR-ITVASARAE 565
>gi|4808336|emb|CAB42750.1| (AL049841) putative membrane protein
[Streptomyces coelicolor]
Length = 601
Score = 115 bits (285), Expect = 2e-24
Identities = 140/557 (25%), Positives = 223/557 (39%), Gaps = 93/557 (16%)
Query: 336 VPQIIALAVFAIGTILLVDGTLPTPKSRQ-----EVAPLPLIETSHLLVSLGGIVLLLIG 390
+P ++ A +G + + G+ P + + EV P + L G++LLL+
Sbjct: 24 IPLLVGRACVLVGLLDIAAGSFPRFRHSRMHALAEVLPGAFGPFAAALSLSAGVLLLLLA 83
Query: 391 QGLQRRSHSAWLLALGICILLPPLALLRGSHYSVSLWAGLTAVTLWMA----RREFYRQS 446
GL+RR AW A + PL + Y SL L +V L R EF +
Sbjct: 84 HGLKRRKRRAWRAAAALL----PLGAVAQFTYRHSLLGVLISVALLFPLLRHRDEF---A 136
Query: 447 ALLDEAWSWRWLSN----------IGIVIVST------------------FWLVFFVYSH 478
AL D WR L+N +G+++V+ + +F V
Sbjct: 137 ALPDPRSRWRALANFVLMSAGSVLLGLLVVNAHPHRMLGDPSLADRITHVLYGLFGVEGP 196
Query: 479 VEYSNDLWWEFATSGNAPRALRALLLICVCLIVFGMARLLHNARRPFTPASEAELQALLP 538
V+Y + W A S L AL L+ ++ R H A R T E L+ALL
Sbjct: 197 VDYRGNTSWTVAFS------LGALGLLTAVTTIYLAFRPEHPAAR-LTEDDEIRLRALLA 249
Query: 539 ILANNKDTKACLAMTGDKALLHDPQKRSFVMMQRYGGSLIAMGDPIGPPEASIQLIWRFR 598
+D+ A+ DKA++ P ++ V + G ++A GDPIG EA I RF
Sbjct: 250 -RHGGRDSLGHFALRRDKAVVFSPSGKAAVTYRVVSGVMLASGDPIGDVEAWPGAIERFM 308
Query: 599 EVADRLGLRPVFYQVADNYWQNYL-DLGMTMVKIGEEAIVDLEKFSLEGSTNAEMRQAFN 657
+ A P ++ + + + G+ +++G+EA+VD+ FSL G +RQ
Sbjct: 309 DEARAHSWTPAVMGCSETGGEVWTRETGLDALELGDEAVVDVADFSLAGRAMRNVRQMVK 368
Query: 658 KGKRLGLRFRILSEEEVR-ALMHRLRQISDEWLEEKGSEEKSFSLGNFDPIYLYRFPVAV 716
+ +R G R+ ++ A + R+R+ +D W S +LG V
Sbjct: 369 RIERAGYETRVRRVADLSDAELDRVRRAADAWRGTDTERGFSMALGR------------V 416
Query: 717 IEHEAEQKIIAFANILKAQPGS----------------NLSIDLMRYSQDAPNGTMDFLF 760
+ +IA A+ +PG S+DLMR + A G + L
Sbjct: 417 GDPADGDCLIATAHKQDTEPGEYGDLKAVLHFVPWGTDGASLDLMRRDRAADPGMNELLI 476
Query: 761 VAMFLWGKEQGFQRFSLGMAPL-SGLAQHHLAGR------WNRFANLIARHGERFYGFSG 813
VA + G R SL A + LA+ G W ++R ++
Sbjct: 477 VAALQAAPKLGIARVSLNFAMFRAALARGEKIGAGPVLRAWRGLLVFLSR----WFQIES 532
Query: 814 LRRFKAKFSPNWCPRYL 830
L +F AKF P W PR++
Sbjct: 533 LYKFNAKFRPRWEPRFV 549
>gi|1838991|emb|CAB06635| (Z85982) lysX [Mycobacterium tuberculosis]
Length = 1172
Score = 97.5 bits (239), Expect = 4e-19
Identities = 117/481 (24%), Positives = 197/481 (40%), Gaps = 44/481 (9%)
Query: 385 VLLLIGQGLQRRSHSAWLLALGICILLPPLALLR----GSHYSVSLWAGL-------TAV 433
VL L+ L R AWL+ L +L + G+ + S L V
Sbjct: 132 VLALLAAALTARKRIAWLVLLANMVLAAVVNAAEIAAGGNTAAESFGENLGFAVHVVAIV 191
Query: 434 TLWMARREFY---RQSALLDEAWSWRWLSNIGIV----IVSTFWLVFFVYSHVEYSNDLW 486
L + REF+ R+ AL A W + +GIV +V F + Y+ +
Sbjct: 192 VLVLGYREFWAKVRRGALFRAAAVWLAGAVVGIVASWGLVELFPGSLAPDERLGYAANRV 251
Query: 487 WEFATS------GNAPRALRALLLICVCLIVFGMARLLHNARRP---FTPASEAELQALL 537
FA + G L A+ + + G A +L ++R T E+ ++ LL
Sbjct: 252 VGFALADPDLFTGRPHVFLNAIFGLFGAFALIGAAIVLFLSQRADNALTGEDESAIRGLL 311
Query: 538 PILANNKDTKACLAMTGDKALLHDPQKRSFVMMQRYGGSLIAMGDPIGPPEASIQLIWRF 597
+ + D+ A DK+++ R+ + + G +A GDP+G A Q + +
Sbjct: 312 DLYGKD-DSLGYFATRRDKSVVFASSGRACITYRVEVGVCLASGDPVGDHRAWPQAVDAW 370
Query: 598 REVADRLGLRPVFYQVADNYWQNYLDLGMTMVKIGEEAIVDLEKFSLEGSTNAEMRQAFN 657
+ G P + Q Y + G+T +++G+EAI+ F L G +RQA
Sbjct: 371 LRLCQTYGWAPGVMGASSQGAQTYREAGLTALELGDEAILRPADFKLSGPEMRGVRQAVT 430
Query: 658 KGKRLGLRFRI-----LSEEEVRALMHRLRQISDEWLEEKGSEEKSFSLGNF-DPIYLYR 711
+ +R GL RI ++E+E+ + R +D W + + S +LG DP
Sbjct: 431 RARRAGLTVRIRRHRDIAEDEMAQTITR----ADSWRDTETERGFSMALGRLGDPADSDC 486
Query: 712 FPVAVIEHEAEQKIIAFANILKAQPGSNLSIDLMRYSQDAPNGTMDFLFVAMFLWGKEQG 771
V I + +++A +++ + +S+DLMR S +PNGT++ + + L + G
Sbjct: 487 LLVEAI--DPHNQVLAMLSLV-PWGTTGVSLDLMRRSPQSPNGTIELMVSELALHAESLG 543
Query: 772 FQRFSLGMAPLSGLAQHHL---AGRWNRFANLIARHGERFYGFSGLRRFKAKFSPNWCPR 828
R SL A + AG R + R++ L R K+ P W PR
Sbjct: 544 ITRISLNFAVFRAAFEQGAQLGAGPVARLWRGLLVFFSRWWQLETLYRSNMKYQPEWVPR 603
Query: 829 Y 829
Y
Sbjct: 604 Y 604
>gi|3025003|sp|P75770|YBHN_ECOLI HYPOTHETICAL 35.9 KD PROTEIN IN
MOAE-RHLE INTERGENIC REGION >gi|1787006 (AE000181) orf,
hypothetical protein [Escherichia coli]
>gi|4062345|dbj|BAA35447| (D90716) ORF_ID:o203#10
[Escherichia coli]
Length = 318
Score = 88.2 bits (215), Expect = 3e-16
Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 64 LVLGLCSYACLVGFDWIGLQRTGKRPHPARVAITAFLAHTIGQTLGFAALTGGAVRLRGY 123
+V+ Y C +D + G + +V + +F+ + TL + G +R R Y
Sbjct: 58 VVVSYLIYGC---YDLLARFYCGHKLAKRQVMLVSFICYAFNLTLS-TWVGGIGMRYRLY 113
Query: 124 SKVGLSLIEIGQIVLMSTLGFIFGAWVLLGLALALEPATATPILPLDTLGIRSTGIALLA 183
S++GL I +I +S G +L G+ +D +R GI LL
Sbjct: 114 SRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLM 173
Query: 184 AFLVMLWLVN-SNGREFGIGRQRFWIPDRRTVLGVTALSIVELGLACAAFYVLLPSEANT 242
V LW + R I Q+ +P + L +S V + A ++LL N
Sbjct: 174 IIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVN- 232
Query: 243 SFFGFIGLWLVAVVAGLISTVPAGLGVFEWSMLKLLP--HTPPSVVLAAALAYRITYYLL 300
+F +G+ LV+ +AG+I +PAG+GV E + LL HT ++AA LAYR+ YY +
Sbjct: 233 -YFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGTIIAALLAYRVLYYFI 291
Query: 301 PTLIAL 306
P L+AL
Sbjct: 292 PLLLAL 297
>gi|2113903|emb|CAB08896| (Z95554) hypothetical protein Rv1619
[Mycobacterium tuberculosis]
Length = 484
Score = 75.3 bits (182), Expect = 2e-12
Identities = 89/377 (23%), Positives = 151/377 (39%), Gaps = 17/377 (4%)
Query: 489 FATSGNAPRALRALLLICVCLIVFGMARLLHNARRPFTPASEAELQALLPILANNKDTKA 548
F +G A L A LL + + G A + + P P + AL I A D+ A
Sbjct: 114 FLLAGLAAHVLVADLLGEILIAGSGWALMWPTSAHP-RPEDLPRVWAL--INATRADSLA 170
Query: 549 CLAMTGDKALLHDPQKRSFVMMQRYGGSLIAMGDPIGPPEASIQLIWRFREVADRLGLRP 608
AM K+ + + + G + GDPIG QL+ F + G R
Sbjct: 171 PFAMQAGKSHHFSAAGTAALAYRTRIGYAVVSGDPIGDEAQFPQLVADFAAMCHMHGWRI 230
Query: 609 VFYQVADN---YWQNYLDLGMTM--VKIGEEAIVDLEKFSLEGSTNAEMRQAFNKGKRLG 663
V ++ W + + +G ++ + IG + ++D+ F + G +RQA + G
Sbjct: 231 VVVGCSERRLGLWSDPMVVGQSLRPIPIGRDVVIDVSNFEMTGRRFRNLRQAVKRTHNFG 290
Query: 664 LRFRILSEEEVRALMHRLRQISDEWLEEKGSE--EKSFSLGNFDPIYLYRFP--VAVIEH 719
+ I++E+++ R ++++ ++ F + N D + R+P +I
Sbjct: 291 VTTEIVAEQQLDD--QRQAELAEVLAASPSGARTDRGFCM-NLDGVLEGRYPGIQLIIAR 347
Query: 720 EAEQKIIAFANILKAQPGSNLSIDLMRYSQDAPNGTMDFLFVAMFLWGKEQGFQRFSLGM 779
+A ++ F A GS++S+D+ + APNG + L M K+ G QR SL
Sbjct: 348 DASGRVQGFHRYATAGGGSDMSLDVPWRRRGAPNGIDERLSADMIAAAKDAGVQRLSLAF 407
Query: 780 APLSGLAQHHLAGRWNRFANLIARHGERFYGFSGLRRFKAKFSPNWCPRYLAAPGGMHLF 839
A L + GR R + + L R+ KF RY+ M
Sbjct: 408 AAFPDLFGANQLGRLQRVCRALIHILDPLIALESLYRYLRKFHALDERRYVLI--SMTQV 465
Query: 840 AALLDVTRLISISPKRR 856
AL V + P+RR
Sbjct: 466 FALALVLLSLEFVPRRR 482
>gi|1510108|dbj|BAA02957| (D13800) ORF-1 [Agrobacterium tumefaciens]
Length = 156
Score = 66.7 bits (160), Expect = 8e-10
Identities = 34/74 (45%), Positives = 46/74 (61%), Gaps = 2/74 (2%)
Query: 678 MHRLRQISDEWLEEKGSEEKSFSLGNFDPIYLYRFPVAVIEHEAEQKIIAFANILKAQPG 737
M L+Q+SD WL + EK FSLG F+P Y+ PVAV+ + KI AFAN++ +
Sbjct: 1 MDELQQVSDGWLAHHNTREKRFSLGAFEPDYILSQPVAVLRKDG--KITAFANLMVTETK 58
Query: 738 SNLSIDLMRYSQDA 751
+IDLMR+S DA
Sbjct: 59 KEATIDLMRFSADA 72
>gi|540994|pir||A36922 orf1 5'of acvB - Agrobacterium tumefaciens
Length = 156
Score = 64.8 bits (155), Expect = 3e-09
Identities = 32/74 (43%), Positives = 46/74 (61%), Gaps = 2/74 (2%)
Query: 678 MHRLRQISDEWLEEKGSEEKSFSLGNFDPIYLYRFPVAVIEHEAEQKIIAFANILKAQPG 737
M L+Q+SD WL + EK FSLG F+P Y+ PVAV+ + KI AFAN++ +
Sbjct: 1 MDELQQVSDGWLAHHNTREKRFSLGAFEPDYILSQPVAVLRKDG--KITAFANLMVTETK 58
Query: 738 SNLSIDLMRYSQDA 751
+ID++R+S DA
Sbjct: 59 KEATIDMLRFSADA 72
>gi|2225983|emb|CAB10049| (Z97193) hypothetical protein Rv1877
[Mycobacterium tuberculosis]
Length = 687
Score = 43.4 bits (100), Expect = 0.008
Identities = 90/366 (24%), Positives = 144/366 (38%), Gaps = 80/366 (21%)
Query: 91 PARVAITAFLAHTIGQTLGFAA-LTGGAVRLRGYSKVGLSLIEIGQIVLMSTLGFIFGAW 149
PA I A L T+ Q+ + L GG V + K+G L+ +++L S + F+ G+
Sbjct: 49 PALPTIVAELGSTVDQSWAVTSYLLGGTVVVVVAGKLG-DLLGRNRVLLGSVVVFVVGS- 106
Query: 150 VLLGLALALEPATATPILPLDTLGIRSTGIALLAAFLVMLW----LVNSNGREFGIG--- 202
VL GL+ + + L G S LAA +V L G FG+
Sbjct: 107 VLCGLSQTMTMLAISRALQGVGAGAISVTAYALAAEVVPLRDRGRYQGVLGAVFGVNTVT 166
Query: 203 --------------RQRFWI--PDRRTVLGVTALSIVELG--------------LACAAF 232
R FWI P VL V A ++ L +A A
Sbjct: 167 GPLLGGWLTDYLSWRWAFWINVPVSIAVLTVAATAVPALARPPKPVIDYLGILVIAVATT 226
Query: 233 YVLLPSEANTSFFGFIGLWLVAVVAGLISTVPAGLGVFEW----SMLKLLP---HTPPSV 285
+++ TS+ G W A + GL+ LG F W + +LP P
Sbjct: 227 ALIMA----TSWGGTTYAWGSATIVGLLIGAAVALGFFVWLEGRAAAAILPPRLFGSPVF 282
Query: 286 VLAAALAYRITYYLLPTLIALTM---------AASSGLRQ-PMRV-----SAGTAIAIWK 330
+ L++ + + +L L + + A +SGLR PM + S GT + + +
Sbjct: 283 AVCCVLSFVVGFAMLGALTFVPIYLGYVDGASATASGLRTLPMVIGLLIASTGTGVLVGR 342
Query: 331 TVRPWVPQIIALAVFAIGTILLVDGTLPTPKSRQEVAPLPLIETSHLLVSLGGI-----V 385
T R + + +A+ A+ +L+ TP PL+++ +L+V GI V
Sbjct: 343 TGRYKIFPVAGMALMAVAFLLMSQMDEWTP---------PLLQSLYLVVLGAGIGLSMQV 393
Query: 386 LLLIGQ 391
L+LI Q
Sbjct: 394 LVLIVQ 399
>gi|4235528 (AF111221) NADH dehydrogenase subunit 2 [Cyprinella
leedsi]
Length = 348
Score = 40.2 bits (92), Expect = 0.072
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 198 EFGIGRQRFWIPDRRTVLGVTALSIVELGLACAAFYVLLPSEANTSFFGFIGLWLVAVVA 257
+ G+ FW+P+ L + I+ A F +++ + + +F F+
Sbjct: 105 KIGLAPLHFWVPEVMQGLDLMTGLILSTWQKLAPFALII--QTSQTFDPFL-----LTTL 157
Query: 258 GLISTVPAGLGVFEWSML-KLLPHTPPS----VVLAAALAYRITYYLLPTLIALTMAASS 312
GL+ST+ G G + L K+L ++ + +++ + +T++ L T I +T AA
Sbjct: 158 GLMSTLVGGWGGLNQTQLRKVLAYSSIAHMGWMIIILQHSPHLTFFALLTYILMTSAAFL 217
Query: 313 GLRQPMRVSAGTAIAIWKTVRPWVPQIIALAVFAIGTILLVDGTLPTPKSRQEVA--PLP 370
L+ GT W + P + AL + ++G + + G +P QE+A LP
Sbjct: 218 TLKFSYATKVGTLATTW-SKSPLLTATTALVLLSLGGLPSLTGFMPKWLILQELAKQDLP 276
Query: 371 LIETSHLLVSL 381
T L +L
Sbjct: 277 FTATIMALAAL 287
>gi|2128959|pir||B64499 hypothetical protein MJ1595 - Methanococcus
jannaschii >gi|1592205 (U67599) conserved hypothetical
protein [Methanococcus jannaschii]
Length = 336
Score = 39.1 bits (89), Expect = 0.16
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 250 LWLVAVVAGLISTVPAGLGVFEWSMLKLLP--HTPPSVVLAAALAYRITYYLLPTLI 304
++L+ +++G++S P+G G + M+ + PPSV A L R+ Y+LPT++
Sbjct: 262 VYLITLLSGVLSITPSGFGTADTVMILSFSAFNIPPSVAAAVTLLDRLVSYILPTIL 318
>gi|5802054|gb|AAD51597.1| (AF114248) NADH dehydrogenase subunit 2
[Eublepharus turkmenicus]
Length = 346
Score = 38.3 bits (87), Expect = 0.28
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 16/228 (7%)
Query: 159 EPATATPILPLDTLGIRSTG---IALLAAFLVMLWLVNSNGREFGIGRQRFWIPD--RRT 213
+ A +T IL TL +TG I L L M+ L + + G+ FW+P+ + T
Sbjct: 63 QTAASTLILLSSTLNAWTTGQWTITELHHPLAMMMLTLAVAMKLGLAPTHFWLPEVMQGT 122
Query: 214 VLGVTALSIVELGLACAAFYVLLPSEANTSFFGFIGLWLVAVVAGLISTVPAGLGVFEWS 273
+ L +A F L + +T +G L++V+ G I+ G+ +
Sbjct: 123 TIKTALLLTTWQKIAPLTFIYLTSNHLSTKMLFTLG--LLSVMLGGIT------GLNQTQ 174
Query: 274 MLKLLPHTPPSVV--LAAALAYRITYYLLPTLIALTMAASSGLRQPMRVS-AGTAIAIWK 330
K++ ++ + + L L + ++ +TM SS + M S T + +
Sbjct: 175 TRKIMAYSSIAHMGWLTMILTLNLNLMTFTLMLYITMTTSSFMILLMSESKTMTDLGLAW 234
Query: 331 TVRPWVPQIIALAVFAIGTILLVDGTLPTPKSRQEVAPLPLIETSHLL 378
T P ++ L++ ++G + + G +P +E+ L +I TS +L
Sbjct: 235 TTSPTSMLLLMLSLLSLGGLPPLSGFMPKLLILKEMTMLNMISTSTIL 282
>gi|5835277|gnl|NCBI_MITO|ND2_10917 NADH dehydrogenase subunit 2
>gi|462763|sp|P34187|NU2M_CROLA NADH-UBIQUINONE
OXIDOREDUCTASE CHAIN 2 >gi|486793|pir||S35463 NADH
dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 2 -
hillstream loach (Crossostoma lacustre) mitochondrion
(SGC1) >gi|2146916|pir||S60272 hypothetical protein 2 -
hillstream loach (Crossostoma lacustre) mitochondrion
(SGC1) >gi|336705 (M91245) NADH dehydrogenase subunit 2
[Crossostoma lacustre]
Length = 348
Score = 37.5 bits (85), Expect = 0.48
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 17/202 (8%)
Query: 182 LAAFLVMLWLVNSNGREFGIGRQRFWIPDRRTVLGVTALSIVELGLACAAFYVLLPSEAN 241
LA+ L M+ L + G+ FW+P+ L +T I+ A F ++ N
Sbjct: 93 LASSLTMMALA----LKVGLAPMHFWMPEVLQGLDLTMGLILSTWQKLAPFALITQMAPN 148
Query: 242 TSFFGFIGLWLVAVVAGLISTVPAGLGVFEWSML-KLLPHTPPS----VVLAAALAYRIT 296
T+ ++ GL+ST+ G G + L K+L ++ + +++ ++T
Sbjct: 149 TN-------PMLLTTLGLLSTLIGGWGGLNQTQLRKILAYSSIAHMGWMIIILQYTPQLT 201
Query: 297 YYLLPTLIALTMAASSGLRQPMRVSAGTAIAIWKTVRPWVPQIIALAVFAIGTILLVDGT 356
L I +T AA L+ T A W + P + AL + ++G + + G
Sbjct: 202 LIALGLYIFMTSAAFLSLKMASATKMNTLTAAW-SKSPVLVSTTALTLLSLGGLPPLTGF 260
Query: 357 LPTPKSRQEVAPLPLIETSHLL 378
+P QE+ L T+ ++
Sbjct: 261 MPKWLILQELTKQDLPATATIM 282
>gi|4235546 (AF111230) NADH dehydrogenase subunit 2 [Cyprinella
zanema]
Length = 348
Score = 37.5 bits (85), Expect = 0.48
Identities = 45/191 (23%), Positives = 81/191 (41%), Gaps = 15/191 (7%)
Query: 198 EFGIGRQRFWIPDRRTVLGVTALSIVELGLACAAFYVLLPSEANTSFFGFIGLWLVAVVA 257
+ G+ FW+P+ L + ++ A F +++ + F L L A+
Sbjct: 105 KIGLAPLHFWMPEVMQGLDLMTGLVLSTWQKLAPFALIIQTAQ-----AFDPLLLTAL-- 157
Query: 258 GLISTVPAGLGVFEWSML-KLLPHTPPS----VVLAAALAYRITYYLLPTLIALTMAASS 312
GL ST+ G G + L K+L ++ + +++ A +T++ L T I +T AA
Sbjct: 158 GLTSTLVGGWGGLNQTQLRKVLAYSSIAHMGWMIIILQHAPHLTFFALLTYILMTSAAFL 217
Query: 313 GLRQPMRVSAGTAIAIWKTVRPWVPQIIALAVFAIGTILLVDGTLPTPKSRQEVA--PLP 370
L+ GT W + P + AL + ++G + + G +P QE+ LP
Sbjct: 218 TLKFSYATKVGTLATTW-SKSPLLTATTALVLLSLGGLPPLTGFMPKWLILQELTKQDLP 276
Query: 371 LIETSHLLVSL 381
T L +L
Sbjct: 277 FTATVMALAAL 287
>gi|4235534 (AF111224) NADH dehydrogenase subunit 2 [Cyprinella
callitaenia]
Length = 348
Score = 36.7 bits (83), Expect = 0.82
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
Query: 198 EFGIGRQRFWIPDRRTVLGVTALSIVELGLACAAFYVLLPSEANTSFFGFIGLWLVAVVA 257
+ G+ FW+P+ L + ++ A F +++ + F L L +
Sbjct: 105 KIGLAPLHFWMPEVMQGLDLMTGLVLSTWQKLAPFALIIQTSQ-----AFDPLLLTTL-- 157
Query: 258 GLISTVPAGLGVFEWSML-KLLPHTPPS----VVLAAALAYRITYYLLPTLIALTMAASS 312
GL ST+ G G + L K+L ++ + +++ A +T++ L T I +T AA
Sbjct: 158 GLTSTLVGGWGGLNQTQLRKILAYSSIAHMGWMIIILQHAPHLTFFALLTYILMTSAAFL 217
Query: 313 GLRQPMRVSAGTAIAIWKTVRPWVPQIIALAVFAIGTILLVDGTLPTPKSRQEVA--PLP 370
L+ GT W + P + AL + ++G + + G +P QE+ LP
Sbjct: 218 TLKFSYATKVGTLATTW-SKSPLLTATTALVLLSLGGLPPLTGFMPKWLILQELTKQDLP 276
Query: 371 LIETSHLLVSL 381
T L +L
Sbjct: 277 FTATVMALAAL 287
>gi|2621439 (AE000823) unknown [Methanobacterium
thermoautotrophicum]
Length = 334
Score = 36.4 bits (82), Expect = 1.1
Identities = 31/106 (29%), Positives = 53/106 (49%), Gaps = 5/106 (4%)
Query: 213 TVLGVT-ALSIVELGLACAAFY-VLLPSEANTSFFGFIGLWLVAVVAGLISTVPAGLGVF 270
T LGV LS++ + C Y V + TSF I ++L+A + G++S +P G+G
Sbjct: 214 TSLGVIFILSLLSWLMECLRLYLVFMAFGVETSFSAVIIIFLLANLVGILSALPGGMGSM 273
Query: 271 EWSMLKLLPHTPPSVVLAAALAY---RITYYLLPTLIALTMAASSG 313
E SM L LA ++A I+++++ L A+ + +G
Sbjct: 274 EVSMAGLFVVFGVPGFLAGSIALVDRIISFWMVTALGAIFSSCYAG 319
>gi|5738796|emb|CAB52970.1| (AL109950) putative membrane-associated
oxidoreductase [Streptomyces coelicolor A3(2)]
Length = 503
Score = 36.4 bits (82), Expect = 1.1
Identities = 20/53 (37%), Positives = 31/53 (57%), Gaps = 2/53 (3%)
Query: 333 RPWVPQIIALAVFAIGTILLVDGTLPTPKSRQEVAPL-PLIETSHLLVSLGGI 384
RPW+ + LA+ +GT+ + P+P R E +P PL+ T LL+ LGG+
Sbjct: 410 RPWLAGVWLLALTLLGTLAFSTHS-PSPVKRDEGSPFQPLVYTLDLLIPLGGL 461
>gi|6137290|sp|O32256|YVBV_BACSU HYPOTHETICAL 32.8 KD PROTEIN IN
ARAR-LACA INTERGENIC REGION >gi|2635913|emb|CAB15405|
(Z99121) similar to hypothetical proteins [Bacillus
subtilis]
Length = 305
Score = 36.0 bits (81), Expect = 1.4
Identities = 74/285 (25%), Positives = 113/285 (38%), Gaps = 41/285 (14%)
Query: 177 TGIALLAAFLVMLWLVNSNGREFGIG-RQRFWIPDRRTVLGVTALSIVELG-------LA 228
T ALL AFLV++W VN + + RT++G L IV L
Sbjct: 7 TRTALLLAFLVIMWGVNWPLSKAALAYSPPLLFAGIRTLIGGLLLVIVALPRIHKLRLKE 66
Query: 229 CAAFYVLLPSEANTSFFGFIGLWLVAVVAGLISTV----PAGLGVFEWSML--------- 275
Y++ T F+G + L + AGL S + P +GVF W L
Sbjct: 67 TWPIYLVSALLNITLFYGLQTIGLNYLPAGLFSAIVFFQPVLMGVFSWLWLGESMFVMKV 126
Query: 276 --KLLPHTPPSVVLAAALAYRITYYLLPTLIALTMAASSGLRQPMRVSAGTAI-AIWKTV 332
+L +V+ AA I+ ++ L+AL A S L G+ + +IW
Sbjct: 127 IGLILGFAGVAVISAAGFGGHIS--VIGVLLALGSAVSWALGTVYMKKTGSRVDSIW--- 181
Query: 333 RPWVPQIIALAVFAIGTILLVDGTLPTPKSR-QEVAPL--PLIETSHLLVSLGGIVLL-L 388
++AL + LL+ G S Q AP L+ S +++LG +V L
Sbjct: 182 ------MVALQLTIGSVFLLISGFWTESFSAIQWTAPFITSLLFISVFVIALGWLVFFTL 235
Query: 389 IGQGLQRRSHSAWLLALGICILLPPLALLRGSHYSVSLWAGLTAV 433
+G G + S L I I+ + L ++SL AGL +
Sbjct: 236 VGSGEASKVASYTFLIPLISIVASSIFL--HEPLTLSLLAGLLLI 278
>gi|5835626|gnl|NCBI_MITO|ND2_14000 NADH dehydrogenase subunit 2
>gi|6226662|sp|Q35924|NU2M_SALSA NADH-UBIQUINONE
OXIDOREDUCTASE CHAIN 2 >gi|3775978|gb|AAD04734.1|
(U12143) NADH dehydrogenase subunit 2 [Salmo salar]
Length = 349
Score = 35.6 bits (80), Expect = 1.8
Identities = 52/209 (24%), Positives = 88/209 (41%), Gaps = 23/209 (11%)
Query: 182 LAAFLVMLWLVNSNGREFGIGRQRFWIPDRRTVLGVTALSIVEL--GLACAAFYVLLPSE 239
LA VML L + G+ FW+P+ L +T I+ LA A + +
Sbjct: 93 LATTTVMLALA----LKLGLAPVHFWLPEVLQGLELTTGLILSTWQKLAPFALMIQVAPT 148
Query: 240 ANTSFFGFIGLWLVAVVAGLISTVPAGLGVFEWSML-KLLPHTPPS----VVLAAALAYR 294
N+S + + GL+ST+ G G + L K+L ++ + +VL A
Sbjct: 149 INSS---------LLIAMGLLSTLVGGWGGLNQTQLRKILAYSSIAHLGWMVLILQYAPS 199
Query: 295 ITYYLLPTLIALTMAASSGLRQPMRVSAGTAIAIWKTVRPWVPQIIALAVFAIGTILLVD 354
+T L I +T +A L+ ++ T W T P + + AL + ++G + +
Sbjct: 200 LTLLSLFLYIIMTSSAFLTLKTNNSLTINTLATSW-TKSPTLAALTALVLLSLGGLPPLS 258
Query: 355 GTLPTPKSRQEVAP--LPLIETSHLLVSL 381
G +P QE+ LPL T + +L
Sbjct: 259 GFMPKWLILQELTKQGLPLSATLAAMTAL 287
>gi|4584466|emb|CAB40669.1| (AL049587) UvrA-like ABC transporter
[Streptomyces coelicolor]
Length = 752
Score = 35.6 bits (80), Expect = 1.8
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 95 AITAFLAHTIGQTLGFAALTGGAVRLRGYSKVGLSLIEIGQIVLMSTLGFIFGAWVLLGL 154
++ LA T GQ LGF + G RLR VGL+ + +GQ +STL G + L
Sbjct: 598 SVADVLAMTAGQALGFFSDPGVRRRLRALRDVGLTYLTLGQ--PLSTLS--GGERQRIKL 653
Query: 155 ALALEPATATPILPLDTLGIRSTGIALLAAFL 186
A L A +L T G+ + + L A L
Sbjct: 654 ATRLHRTGAVYVLDEPTTGLHMSDVEGLLALL 685
>gi|461891|sp|Q02761|CYB_RHOSH CYTOCHROME B >gi|97506|pir||S13869
ubiquinol--cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Rhodobacter sphaeroides
>gi|46427|emb|CAA39624| (X56157) ubiquinol-cytochrome c
reductase [Rhodobacter sphaeroides]
Length = 445
Score = 35.2 bits (79), Expect = 2.4
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 21/127 (16%)
Query: 242 TSFFGFI------GLWLVAVVAGLISTVPA-GLGVFEWSMLKLLPHTPPSVVLAAALAYR 294
T+F G++ W V+ GL +P G + W + P+V A +
Sbjct: 142 TAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLL------GGPAVDNATLNRFF 195
Query: 295 ITYYLLPTLIALTMAA------SSGLRQP--MRVSAGTAIAIWKTVRPWVPQIIALAVFA 346
+YLLP +IA +A S+G P + V + K P+ P I VFA
Sbjct: 196 SLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFA 255
Query: 347 IGTILLV 353
+ +LLV
Sbjct: 256 LAVVLLV 262
>gi|4454039|emb|CAA23036.1| (AL035394) putative Na+/H+-exchanging
protein [Arabidopsis thaliana]
Length = 820
Score = 35.2 bits (79), Expect = 2.4
Identities = 42/145 (28%), Positives = 63/145 (42%), Gaps = 24/145 (16%)
Query: 66 LGLCSYACLVGF--DWIGLQRTGKRPHPARVA-ITAFLAHTIGQT--------------- 107
LGL + LVG D L+RTGKR +A IT IG +
Sbjct: 99 LGLIFFLFLVGLELDPKSLKRTGKRALSIALAGITLPFVLGIGTSFALRSSIADGASKAP 158
Query: 108 ----LGFA-ALTGGAVRLRGYSKVGLSLIEIGQIVLMSTLGFIFGAWVLLGLALALEPAT 162
+G A ++T V R +++ L +IG+I L + AW+LL LA+AL
Sbjct: 159 FLVFMGVALSITAFPVLARILAEIKLLTTDIGKIALSAAAVNDVAAWILLALAVALSGEG 218
Query: 163 ATPILPLDTLGIRSTGIALLAAFLV 187
++P+ L + + G L F+V
Sbjct: 219 SSPLTSL-WVFLSGCGFVLFCIFVV 242
>gi|6692096|gb|AAF24561.1|AC007764_3 (AC007764) F22C12.7
[Arabidopsis thaliana]
Length = 868
Score = 35.2 bits (79), Expect = 2.4
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 29/149 (19%)
Query: 66 LGLCSYACLVGF--DWIGLQRTGKRPHPARVA----------ITAFL---AHTIGQT--- 107
LGL + LVG D L+RTGK+ A +T+F A + G
Sbjct: 165 LGLLLFLFLVGLEIDLTSLRRTGKKAISIAAAGMLLPFGMGIVTSFAFPEASSSGDNSKV 224
Query: 108 ------LGFA-ALTGGAVRLRGYSKVGLSLIEIGQIVLMSTLGFIFGAWVLLGLALALEP 160
+G A ++T V R +++ L ++G+I + + AWVLL LA++L
Sbjct: 225 LPFIIFMGVALSITAFGVLARILAELKLLTTDLGRISMNAAAINDVAAWVLLALAVSLSG 284
Query: 161 ATATPILPLDTLGIRSTGIA-LLAAFLVM 188
+P++PL L +GIA ++A FL++
Sbjct: 285 DRNSPLVPLWVL---LSGIAFVIACFLIV 310
>gi|2960161|emb|CAA18059.1| (AL022121) hypothetical protein Rv3737
[Mycobacterium tuberculosis]
Length = 529
Score = 34.4 bits (77), Expect = 4.2
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 303 LIALTMAASSGLRQPMRVSAGTAIAIWKTVRPWVPQIIALAVFAIGTILLVDGTLPTPKS 362
LI+L ++G++ + V A T +A T +P ++A++ A+ + L +
Sbjct: 284 LISLRGVTNAGIQIELHVDATTTLA---TPGMPLPILVAVSGAALSGVCLTIASY----- 335
Query: 363 RQEVAPLPLIETSHLLVSLGGIVLLLIGQGLQRRSHSAWLLALGICILLPPLALLRGSHY 422
APL + T+ L L +VL+ +G R + W A+G+ L +++ R +
Sbjct: 336 ----APLRSVATAGLSAGLAELVLIGLGAAGFGRVVATWTAAIGVGFLATLISIRRQAPA 391
Query: 423 SVSLWAGL 430
V+ AG+
Sbjct: 392 LVTATAGI 399
>gi|5852327|gb|AAD54008.1|AF088856_7 (AF088856) IgiE [Vogesella
indigofera]
Length = 408
Score = 34.4 bits (77), Expect = 4.2
Identities = 61/225 (27%), Positives = 85/225 (37%), Gaps = 44/225 (19%)
Query: 151 LLGLALALEPATATPILPL-----DTLGIRSTGIALLAAFLVMLW---------LVNSNG 196
+L L+L L PA A I PL G+RS GI+LL V++ + + G
Sbjct: 16 ILLLSLNLRPAIAA-IGPLIQSISHDAGVRSVGISLLTTIPVLMMGLGAIYAARIRQALG 74
Query: 197 REFGIGR----------QRFWIPDRRTVLGVTALSIVELGLACAAFYVLLPSEANTSFFG 246
GI R W DR + LS +GL A LLP +F
Sbjct: 75 ERGGITAGSALIAVACLMRLWADDRNGLF----LSAALVGLGIAVIQALLPGFIKRNFGA 130
Query: 247 FIGLWLVAVVAGLISTVPAGLGVFEWSMLKL-LPHTPPSVVLAAALAYRITYYLLPTLIA 305
+ G+++ G G W +L T S L AALA ++LL +L +
Sbjct: 131 RTSSVIALYSTGIVAGAAIGSGTASWLEDQLGWLSTLASWSLPAALA--TVFWLLASLGS 188
Query: 306 LTMAASSGLRQPMRVSAGT-AIAIWKTVRPWVPQIIALAVFAIGT 349
S+ V A T ++ W+ R W L F IGT
Sbjct: 189 QHEGRSN-------VQATTRSVPFWRIGRCW----SLLLFFGIGT 222
>gi|3242279|emb|CAA16667| (AL021646) nuoL [Mycobacterium
tuberculosis]
Length = 633
Score = 34.0 bits (76), Expect = 5.4
Identities = 77/339 (22%), Positives = 128/339 (37%), Gaps = 48/339 (14%)
Query: 60 IVLTLVLGLCSYACLVGFD-WIGLQRTGKRPHPARVAITAFLA------------HTIGQ 106
I L ++LG C+ + V W+G G P A + + + +
Sbjct: 222 IGLLMLLGACAKSAQVPLQAWLGDAMEGPTPVSALIHAATMVTAGVYLIVRSGPLYNLAP 281
Query: 107 TLGFAALTGGAVRLRGYSKVGLSLIEIGQIVLMSTLGFIFGAWVLLGLALALEPAT-ATP 165
T A + GAV L + +G + +I + + ST+ I G VL A L PA A
Sbjct: 282 TAQLAVVIVGAVTLLFGAIIGCAKDDIKRALAASTISQI-GYMVL---AAGLGPAGYAFA 337
Query: 166 ILPLDTLGIRSTGIALLAAFLVMLWLVNSNGREFGIGRQRFWIPDRRTVLGVTALSIVEL 225
I+ L T G G+ L + ++ + R +G R +P G+ L+I+ +
Sbjct: 338 IMHLLTHGFFKAGLFLGSGAVIHAMHEEQDMRRYG--GLRAALPVTFATFGLAYLAIIGV 395
Query: 226 GLACAAFYVLLPSEANTSFFGFIGLWLVAVVAGLISTVPAGLGVFEWSMLKLL------- 278
F EA G G L G + + AG+ F + + L+
Sbjct: 396 PPFAGFFSKDAIIEAALGAGGIRGSLL-----GGAALLGAGVTAFYMTRVMLMTFFGEKR 450
Query: 279 ------PHTPPSVVLAAALAYRITYYLLPTLIALTMAASSGLRQPMRVSAGTAIAIWKTV 332
PH P+V+ + + L+A+ LR ++ G+ +
Sbjct: 451 WTPGAHPHEAPAVMTWPMILLAVGSVFSGGLLAV----GGTLRHWLQPVVGSHEEATHAL 506
Query: 333 RPWVPQIIALAVFAIGTILL--VDGTLPTPKSRQEVAPL 369
WV +AL V A+G + + GT P P+ VAP+
Sbjct: 507 PTWVATTLALGVVAVGIAVAYRMYGTAPIPR----VAPV 541
>gi|3183075|sp|O06400|MENA_MYCTU PROBABLE 1,4-DIHYDROXY-2-NAPHTHOATE
OCTAPRENYLTRANSFERASE (DHNA-OCTAPRENYLTRANSFERASE)
>gi|2113996|emb|CAB08985| (Z95558) menA [Mycobacterium
tuberculosis]
Length = 292
Score = 34.0 bits (76), Expect = 5.4
Identities = 34/114 (29%), Positives = 45/114 (38%), Gaps = 37/114 (32%)
Query: 320 VSAGTAIAIWKTVRPWVPQIIALAVFA-----------------------IGTILLVDGT 356
V AGT A W W ++ALAV +G + LV
Sbjct: 23 VVAGTGAAAWLHAAVWWKALLALAVAVALVIGVNYANDYSDGIRGTDDDRVGPVRLVGSR 82
Query: 357 LPTPKSRQEVAPLPLIETSHLLVSLGGIVLLLIGQGLQRRSHSAWLLALG-ICI 409
L TP+S L TS L +L G+VL L+ + WL+A+G ICI
Sbjct: 83 LATPRS-----VLTAAMTSLALGALAGLVLALLS--------APWLIAVGAICI 123
>gi|5852331|gb|AAD54011.1|AF088857_3 (AF088857) PecM [Vogesella
indigofera]
Length = 297
Score = 34.0 bits (76), Expect = 5.4
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 47/215 (21%)
Query: 251 WLVAVV---AGLISTVPAGLGVFEWSMLKLLPHTPPSVVLAAAL---AYRITYYLLPTLI 304
WL A + AG++ +PAGL + W+ P ++L + L A++ ++ +
Sbjct: 36 WLPAGLPFSAGVLRVLPAGLLLLLWTRHLPQRQEWPRLLLLSLLNIGAFQALLFVAAYRL 95
Query: 305 ALTMAASSGLRQPMRVSAGTAIAIW----KTVRPWVPQIIALAVFAIGTILLVDGTLPTP 360
+AA G QP+ + +W +T RP V + A A A +LL G
Sbjct: 96 PGGIAAVLGAIQPLLMMG----LLWGLERQTPRPLV-LLAACAGLAGMAVLLNAGNARW- 149
Query: 361 KSRQEVAPLPLIETSHLLVSLGGIVLLLIGQGLQRRSHSA--------WLLALGICILL- 411
++ +L + GG V++ +G L RR S+ W LALG +LL
Sbjct: 150 ------------DSIGVLAAAGGAVVMALGMYLARRWGSSLPLLALTGWQLALGGLMLLP 197
Query: 412 ------PPLALLRGSHYS----VSLWAGLTAVTLW 436
PPL L ++ + +SL L A LW
Sbjct: 198 AALWLDPPLPALSAANVAGYAYLSLVGALLAYGLW 232
>gi|477557|pir||A49201 type 5 adenylyl cyclase - mouse
Length = 1166
Score = 33.6 bits (75), Expect = 7.1
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 227 LACAA-FYVLLPSEANTSFFGFIGLWLVA-VVAGLISTVPAGLGVFEWSMLKLLPHTPPS 284
L CA+ +V+L N F +W+V+ VV G+++ V G L PH+P +
Sbjct: 182 LTCASVLFVVLMVVCNRHSFRQDSMWVVSYVVLGILAAVQVG------GALAANPHSPSA 235
Query: 285 VVLAAALAYRITYYLLPTLIALTMAASSGL 314
+ ITY LLP I + A SGL
Sbjct: 236 GLWCPVFFVYITYTLLP--IRMRAAVLSGL 263
>gi|6671513|ref|NP_031431.1|| adenylate cyclase 6
>gi|231925|sp|Q01341|CYA6_MOUSE ADENYLATE CYCLASE, TYPE
VI (ATP PYROPHOSPHATE-LYASE) (CA(2+)-INHIBITABLE
ADENYLYL CYCLASE) >gi|476873|pir||A46187 adenylate
cyclase (EC 4.6.1.1) type V, calcium-inhibitable - human
>gi|191691 (M93422) adenylyl cyclase type VI [Mus
musculus]
Length = 1165
Score = 33.6 bits (75), Expect = 7.1
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 227 LACAA-FYVLLPSEANTSFFGFIGLWLVA-VVAGLISTVPAGLGVFEWSMLKLLPHTPPS 284
L CA+ +V+L N F +W+V+ VV G+++ V G L PH+P +
Sbjct: 182 LTCASVLFVVLMVVCNRHSFRQDSMWVVSYVVLGILAAVQVG------GALAANPHSPSA 235
Query: 285 VVLAAALAYRITYYLLPTLIALTMAASSGL 314
+ ITY LLP I + A SGL
Sbjct: 236 GLWCPVFFVYITYTLLP--IRMRAAVLSGL 263
>gi|191727 (M96653) adenylyl cyclase, type 6 [Mus musculus]
Length = 1155
Score = 33.6 bits (75), Expect = 7.1
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 227 LACAA-FYVLLPSEANTSFFGFIGLWLVA-VVAGLISTVPAGLGVFEWSMLKLLPHTPPS 284
L CA+ +V+L N F +W+V+ VV G+++ V G L PH+P +
Sbjct: 176 LTCASVLFVVLMVVCNRHSFRQDSMWVVSYVVLGILAAVQVG------GALAANPHSPSA 229
Query: 285 VVLAAALAYRITYYLLPTLIALTMAASSGL 314
+ ITY LLP I + A SGL
Sbjct: 230 GLWCPVFFVYITYTLLP--IRMRAAVLSGL 257
>gi|5834987|gnl|NCBI_MITO|ATP6_10422 ATP synthase F0 subunit 6
>gi|114468|sp|P00849|ATP6_XENLA ATP SYNTHASE A CHAIN
(PROTEIN 6) >gi|67909|pir||PWXL6 H+-transporting ATP
synthase (EC 3.6.1.34) protein 6 - African clawed frog
mitochondrion (SGC1) >gi|807687 (M10217) ATPase subunit
6 [Xenopus laevis]
Length = 226
Score = 33.6 bits (75), Expect = 7.1
Identities = 38/193 (19%), Positives = 76/193 (38%), Gaps = 25/193 (12%)
Query: 172 LGIRSTGIALLAAFLVMLWLVNSNGREFGIGRQRFWI-------------PDRRTVLGVT 218
LGI IA+L F ++ W + SNG + + W P + L +T
Sbjct: 15 LGIPLIAIAMLDPFTLISWPIQSNGFNNRLITLQSWFLHNFTTIFYQLTSPGHKWALLLT 74
Query: 219 ALSIVELGLACAAF--YVLLPSEANTSFFGF-IGLWLVAVVAGLISTVPAGLGVFEWSML 275
+L ++ + L Y P+ + G + LWL V+ T +++
Sbjct: 75 SLMLLLMSLNLLGLLPYTFTPTTQLSLNMGLAVPLWLATVIMASKPT--------NYALG 126
Query: 276 KLLPH-TPPSVVLAAALAYRITYYLLPTLIALTMAASSGLRQPMRVSAGTAIAIWKTVRP 334
LLP TP ++ + I+ ++ P + + + A+ + TA + ++ P
Sbjct: 127 HLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLSIMP 186
Query: 335 WVPQIIALAVFAI 347
V + ++ +F +
Sbjct: 187 TVAILTSIVLFLL 199
>gi|1131440|gb|AAC96464.1| (U42580) a96R [Paramecium bursaria
Chlorella virus 1]
Length = 67
Score = 33.6 bits (75), Expect = 7.1
Identities = 11/24 (45%), Positives = 15/24 (61%)
Query: 434 TLWMARREFYRQSALLDEAWSWRW 457
+LW RR F A +++ WSWRW
Sbjct: 39 SLWFKRRRFVNIRAFVNKGWSWRW 62
>gi|2501375|sp|Q51881|NRTB_PHOLA NITRATE TRANSPORT PERMEASE PROTEIN
NRTB >gi|1361335|pir||S56642 probable nitrate transport
protein nrtB - oscillatoriacean cyanobacterium
>gi|887567|emb|CAA79657| (Z19598) hydrophobic protein
[Phormidium laminosum]
Length = 279
Score = 33.2 bits (74), Expect = 9.3
Identities = 43/141 (30%), Positives = 58/141 (40%), Gaps = 20/141 (14%)
Query: 142 LGFIFGAWVLLGLAL-----ALEPATATPILPLDTLGIR-STGIALLAAFLVMLWLVNSN 195
LG + G VL+ AL L LP+ R S A+ F+ +W + N
Sbjct: 107 LGILIGVSVLMFQALDPIFQVLRTVPPLAWLPISLAAFRDSQPAAIFVIFITAIWPIIIN 166
Query: 196 GREFGIGRQRFWIP-DRRTVLGVTALSIVELGLACAAFYVLLPSEANTSFFGF---IGLW 251
+G Q IP D V V LS ++ L VLLP+ F G IGL
Sbjct: 167 T---AVGVQN--IPQDYNNVARVLKLSRLDYFLK-----VLLPATVPYIFTGLKIAIGLS 216
Query: 252 LVAVVAGLISTVPAGLGVFEW 272
+A+VA + T G+G F W
Sbjct: 217 WLAIVAAEMLTGGVGIGFFIW 237
>gi|2500938|sp|Q10286|ITR1_SCHPO MYO-INOSITOL TRANSPORTER 1
>gi|1420856|emb|CAA67211| (X98622) myo-inositol
transporter [Schizosaccharomyces pombe]
Length = 575
Score = 33.2 bits (74), Expect = 9.3
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 211 RRTVLGVTALSIVELGLACAAFYVLLPSEANTSF-FGFIGLWLVAVVAGLI---STVPAG 266
RR +L +T ++ + CA + LP + N ++ G W + V+ +I ++ +G
Sbjct: 400 RRILLLLTVWGMIAALIVCAVAFHFLPKDENGNYTSGQSNAWAIVVLISMIVYVASYASG 459
Query: 267 LGVFEWSMLKLLP 279
LG W +L P
Sbjct: 460 LGNLPWQQSELFP 472
>gi|1652921|dbj|BAA17839| (D90909) phosphate transport system
permease protein PstA [Synechocystis sp.]
Length = 290
Score = 33.2 bits (74), Expect = 9.3
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 148 AWVLLGLALALEPATATPILPLDTLGIRSTGIALLA--AFLVMLWLVNSNGREFGIGRQR 205
AWV+ GL+ L P+L + I G+ L+ F+ + V G G
Sbjct: 21 AWVMGGLSFTLTLVALLPLLAI-LAAIIQRGLPTLSWEVFIHLPAPVGVEGEPNGFANA- 78
Query: 206 FWIPDRRTVLGVTALSIVELGLACAAFYVLLPSEANTSFFGFIGLWLVAVVAGLISTVPA 265
I T++G+ AL V LG+ F L A ++ G+ V V+ +S+VP+
Sbjct: 79 --IVGTLTMVGLGALFSVPLGVMTGVF--LAEFAAGSAIAN--GVRFVTVI---LSSVPS 129
Query: 266 GL-GVFEWSMLKLLPHTPPSVVLAAALAYRITYYLLPTLIALTMAASSGLRQPMRVSAGT 324
+ GVF + +L + T A LA + ++ +IALT + L P+ G+
Sbjct: 130 VIVGVFAYGVLVIT--TKQFSAYAGGLALGV---IMTPIIALTTEEALKL-VPLHYRLGS 183
Query: 325 A---IAIWKTVRPWVPQIIALAVFAIGTILLVDGTLPTPKSRQEVAPL 369
A + W+T V +I A+ AI T +L L ++ E APL
Sbjct: 184 AALGASKWETT---VKTVIPCAIPAITTGVL----LAVARAAGETAPL 224
>gi|2440196|emb|CAB16718.1| (Z99532) myo-inositol transporter
[Schizosaccharomyces pombe]
Length = 286
Score = 33.2 bits (74), Expect = 9.3
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 211 RRTVLGVTALSIVELGLACAAFYVLLPSEANTSF-FGFIGLWLVAVVAGLI---STVPAG 266
RR +L +T ++ + CA + LP + N ++ G W + V+ +I ++ +G
Sbjct: 111 RRILLLLTVWGMIAALIVCAVAFHFLPKDENGNYTSGQSNAWAIVVLISMIVYVASYASG 170
Query: 267 LGVFEWSMLKLLP 279
LG W +L P
Sbjct: 171 LGNLPWQQSELFP 183
>gi|3877553|emb|CAB07625.1| (Z93383) cDNA EST yk444e9.3 comes from
this gene; cDNA EST yk558b12.3 comes from this gene
[Caenorhabditis elegans]
Length = 309
Score = 33.2 bits (74), Expect = 9.3
Identities = 19/66 (28%), Positives = 34/66 (50%), Gaps = 4/66 (6%)
Query: 618 WQNYLDLGMTMVKIGEEAIVDLEKFSLEGSTNAEMRQA----FNKGKRLGLRFRILSEEE 673
W +Y+D MT+++ + ++ FS T+ R A + K KR+ L+ +L EE+
Sbjct: 151 WNSYVDDVMTILRCCDSEVLKDIGFSCSDMTDQFPRIAQLDQYKKAKRIRLKHFVLKEEQ 210
Query: 674 VRALMH 679
+ L H
Sbjct: 211 IENLFH 216
>gi|5458515|emb|CAB50003.1| (AJ248286) PURINE-CYTOSINE PERMEASE
related [Pyrococcus abyssi]
Length = 414
Score = 33.2 bits (74), Expect = 9.3
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 9/54 (16%)
Query: 448 LLDEAWS------WRWLSNIGIVI--VSTFWLVFFVYSHVEYSNDLWWEFATSG 493
+L AW+ WRWL + +V+ V + WL++ ++S +S +LW + T G
Sbjct: 131 ILVTAWTIVGPERWRWLEKLSVVLLGVLSVWLLYVIFSKYSFS-ELWNKPGTGG 183
Database: nr
Posted date: Feb 20, 2000 12:20 AM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.326 0.140 0.439
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243390348
Number of Sequences: 457798
Number of extensions: 10368806
Number of successful extensions: 35332
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 35274
Number of HSP's gapped (non-prelim): 61
length of query: 863
length of database: 140,871,481
effective HSP length: 53
effective length of query: 810
effective length of database: 116,608,187
effective search space: 94452631470
effective search space used: 94452631470
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.7 bits)
S2: 74 (33.2 bits)