BLASTP 2.0.10 [Aug-26-1999]
Query= XF-07B05-GL44
(301 letters)
Database: nr
457,798 sequences; 140,871,481 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|3025104|sp|P76065|YDAU_ECOLI HYPOTHETICAL 32.5 KD PROTEIN IN... 72 7e-12
gi|3851592 (AF093575) surface antigen ariel1 [Entamoeba histoly... 39 0.065
gi|4240137|dbj|BAA74847.1| (AB020631) KIAA0824 protein [Homo sa... 39 0.065
gi|2896033 (AF046935) PCF11p homolog [Homo sapiens] 39 0.065
gi|6624128|gb|AAF19255.1|AC004858_3 (AC004858) U1 small ribonuc... 38 0.15
gi|4050087 (AF109907) S164 [Homo sapiens] 38 0.15
gi|786136 (L41833) polymorphic immunodominant molecule [Theiler... 36 0.56
gi|3924672|gb|AAC79153.1| (AC004943) alpha-fetoprotein enhancer... 35 0.74
gi|976347 (L32832) zinc finger homeodomain protein [Homo sapien... 35 0.74
gi|5901894|ref|NP_008816.1|| AT-binding transcription factor 1 ... 35 0.74
gi|4006829|gb|AAC95171.1| (AC005970) putative protein kinase [A... 35 0.96
gi|4835761|gb|AAD30228.1|AC007202_10 (AC007202) T8K14.10 [Arabi... 35 0.96
gi|4063374 (AF088288) caspase-related protein 2A [Caenorhabditi... 34 1.3
gi|5174567|ref|NP_005923.1|| mitochondrial intermediate peptida... 34 1.3
gi|6321128|ref|NP_011206.1|YFR016C| Yfr016cp >gi|1175989|sp|P43... 34 1.3
gi|2980765|emb|CAA18192.1| (AL022198) hypothetical protein [Ara... 34 1.7
gi|4567275|gb|AAD23688.1|AC006841_21 (AC006841) hypothetical pr... 34 1.7
gi|4768867|gb|AAD29661.1|AF124757_21 (AF124757) outer membrane ... 34 1.7
gi|6322035|ref|NP_012110.1|UBP7| Ubiquitin-specific protease; U... 34 2.2
gi|5525059|emb|CAB50875.1| (AL096844) putative integral membran... 34 2.2
gi|2130461|pir||S55785 nucleolar protein gar2 - fission yeast (... 33 2.8
gi|1200129|emb|CAA88906| (Z49081) alpha-adducin, hypertensive p... 33 2.8
gi|3861436|emb|CAA22041| (AL033505) hypothetical protein SC1E6.... 33 2.8
gi|633620|emb|CAA58690| (X83715) alpha adducin [Rattus norvegicus] 33 2.8
gi|3941737|gb|AAC82480.1|AAC82480 (AF109719) BAT2 [Mus musculus] 33 2.8
gi|6226864|sp|P41891|GAR2_SCHPO GAR2 PROTEIN >gi|2398808|emb|CA... 33 2.8
gi|3947714|emb|CAA05919| (AJ003164) initiation factor IF2 [Stre... 33 2.8
gi|2134123|pir||I51618 nucleolar phosphoprotein - African clawe... 33 2.8
gi|4454009|emb|CAA23062| (AL035396) putative protein [Arabidops... 33 2.8
gi|5924068|gb|AAD56435.1|AF162863_3 (AF162863) TpgX [Staphyloco... 33 2.8
gi|6907096|dbj|BAA90623.1| (AP001129) ESTs AU033004(S0924),C747... 33 2.8
gi|128146|sp|P16053|NFM_CHICK NEUROFILAMENT TRIPLET M PROTEIN (... 33 3.7
gi|6320976|ref|NP_011055.1|PAK1| DNA polymerase alpha suppressi... 33 3.7
gi|86387|pir||S08061 neurofilament triplet M protein - chicken 33 3.7
gi|6680736|ref|NP_031522.1|| AT motif binding factor 1 >gi|1345... 33 3.7
gi|2623666 (AF030429) dentatorubro-pallidoluysian atrophy prote... 33 3.7
gi|4557449|ref|NP_001262.1|| chromodomain helicase DNA binding ... 33 3.7
gi|86388|pir||A27040 neurofilament triplet M protein - chicken ... 33 3.7
gi|2981173 (AF053711) neurofilament medium subunit [Serinus can... 33 3.7
gi|6689255|emb|CAA21914.2| (AL033389) hypothetical dnaJ protein... 33 3.7
gi|126374|sp|P29362|LMP1_EBVC LATENT MEMBRANE PROTEIN 1 (LMP-1)... 32 4.9
gi|755081 (L41148) schizont/sporozoite surface protein [Theiler... 32 4.9
gi|5902104|ref|NP_008872.1|| SRY (sex-determining region Y)-box... 32 4.9
gi|4704830|gb|AAD28290.1|AF139380_1 (AF139380) LlDD2T15 [Lupinu... 32 4.9
gi|4874305|gb|AAD31367.1|AC006053_9 (AC006053) unknown protein ... 32 4.9
gi|254751|bbs|112414 (S45044) BR6=Balbiani ring [Chironomus ten... 32 4.9
gi|5732083|gb|AAD48982.1|AF162444_14 (AF162444) similar to a fa... 32 4.9
gi|310893 (L06323) membrane protein [Theileria parva] 32 6.4
gi|548996|sp|Q01443|SSP2_PLAYO SPOROZOITE SURFACE PROTEIN 2 PRE... 32 6.4
gi|134817|sp|P22698|SPG7_DICDI SPORE GERMINATION PROTEIN 270-11... 32 6.4
gi|121351|sp|P00965|GLN3_PHAVU GLUTAMINE SYNTHETASE N-1 (ISOZYM... 32 6.4
gi|347377 (L22179) MLL-AF4 der(11) fusion protein [Homo sapiens... 32 6.4
gi|1076926|pir||S52837 slt1 protein - fission yeast (Schizosacc... 32 6.4
gi|1177024|sp|P42694|Y054_HUMAN HYPOTHETICAL PROTEIN KIAA0054 >... 32 6.4
gi|3024655|sp|O09141|SX21_MOUSE TRANSCRIPTION FACTOR SOX-21 (TR... 32 6.4
gi|2826523 (AF017182) putative transcription factor; SOX10 [Mus... 32 6.4
gi|2911897 (AF047653) No definition line found [Caenorhabditis ... 32 6.4
gi|283464|pir||A60540 sporozoite surface protein 2 - Plasmodium... 32 6.4
gi|6175076|sp|Q04888|SX10_MOUSE TRANSCRIPTION FACTOR SOX-10 >gi... 32 6.4
gi|5852089|emb|CAB55396.1| (AL117264) zwh12.1 [Oryza sativa] 32 6.4
gi|5880452|gb|AAD54653.1|AF086703_2 (AF086703) LppA [Mycoplasma... 32 6.4
gi|6910567|gb|AAF31272.1|AC006424_1 (AC006424) Location of EST ... 32 8.3
gi|6969444|gb|AAF33783.1|AF220424_1 (AF220424) coilin p80 [Ratt... 32 8.3
gi|729092|sp|Q06850|CDP1_ARATH CALCIUM-DEPENDENT PROTEIN KINASE... 32 8.3
gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorha... 32 8.3
gi|6226564|sp|P34545|CBP1_CAEEL CBP-1 PROTEIN >gi|3979836|emb|C... 32 8.3
gi|4056437 (AC005990) Strong similarity to PFAM PF|00069 Eukary... 32 8.3
gi|4138732|emb|CAA76742.1| (Y17332) proline-rich protein [Zea m... 32 8.3
gi|4753723|emb|CAB41947.1| (AJ133778) Six4 protein [Gallus gallus] 32 8.3
gi|420411|pir||A45709 major early-transcribed gene ME53 - Autog... 32 8.3
gi|6730665|gb|AAF27086.1|AC007945_12 (AC007945) F28C11.15 [Arab... 32 8.3
>gi|3025104|sp|P76065|YDAU_ECOLI HYPOTHETICAL 32.5 KD PROTEIN IN
SIEB-TRKG INTERGENIC REGION >gi|1787622 (AE000233) orf,
hypothetical protein [Escherichia coli]
Length = 285
Score = 71.8 bits (173), Expect = 7e-12
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 9 YYERHIGDYARDTGYLSVLEHGIYCLLLDRYYATEQPIPANKAHRIARAYSKKEKSAVDV 68
Y + +I DY DT +LS EHG Y LL+ Y+ T +PIP N+ +IAR + + + V+
Sbjct: 23 YMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIAR-LTNERWADVEP 81
Query: 69 VLDEFFLLQDDGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSAHH-DSQTQTQQKPA 127
L EFF + W + R +E++A K + GK + R S D QT+ ++
Sbjct: 82 SLQEFFCDNGEEWVHLRIEEDLASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLT 141
Query: 128 DFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTP 162
D + NT + + K P P
Sbjct: 142 GVQTDVEVVFEHDVNTKATNKDTDKDLKTDPPLNP 176
>gi|3851592 (AF093575) surface antigen ariel1 [Entamoeba
histolytica]
Length = 215
Score = 38.7 bits (88), Expect = 0.065
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 62 EKSAVDVVLDEFFLLQDDGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQ 121
+KS+ + LDE Q D N + +E +++ + N +P S+++
Sbjct: 50 KKSSSNSELDENSNNQPDESSNNKPNESSDNKPNESSDNKPNESSNNKPSESSNNKPDES 109
Query: 122 TQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTPDPIISSSLRSEES 175
+ KP + + PNE+ +N PNE+ N KP+ P SS+ + ES
Sbjct: 110 SNNKPNESSDNKPNES---SNNKPNESS---NNKPSESSNNKPDESSNNKPNES 157
>gi|4240137|dbj|BAA74847.1| (AB020631) KIAA0824 protein [Homo
sapiens]
Length = 1644
Score = 38.7 bits (88), Expect = 0.065
Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 9/191 (4%)
Query: 101 QENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQ 160
+E+ K+G +P S+ K + +P + + + + + P P +
Sbjct: 551 EESEKQGTKPGRSSTRKRSRSRSPKSRSPIIHSPKR-RDRRSPKRRQRSMSPTSTPKAGK 609
Query: 161 TPDPIISSSLRSEESLVFAEDGNATGCTGKPKRSPHGSRLPDDWAPSEGDVLYATQQGVD 220
S E + ED NA T + R P + ++ P E ++T+ G +
Sbjct: 610 IRQSGAKQSHMEEFTPPSREDRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTE 669
Query: 221 GRYEAEKFRDYWRSVAGAKGRKQDWEATWRNWIRRAAEDKTSSMKHGYQRHEYNSKPMRL 280
+ E W+S AK W++ W D+ S H R ++S L
Sbjct: 670 PKENVEN----WQSSKSAK----RWKSGWEENKSLQQVDEHSKPPHLRHRESWSSTKGIL 721
Query: 281 SPAERSHVFHR 291
SP HR
Sbjct: 722 SPRAPKQQQHR 732
>gi|2896033 (AF046935) PCF11p homolog [Homo sapiens]
Length = 725
Score = 38.7 bits (88), Expect = 0.065
Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 9/191 (4%)
Query: 101 QENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQ 160
+E+ K+G +P S+ K + +P + + + + + P P +
Sbjct: 462 EESEKQGTKPGRSSTRKRSRSRSPKSRSPIIHSPKR-RDRRSPKRRQRSMSPTSTPKAGK 520
Query: 161 TPDPIISSSLRSEESLVFAEDGNATGCTGKPKRSPHGSRLPDDWAPSEGDVLYATQQGVD 220
S E + ED NA T + R P + ++ P E ++T+ G +
Sbjct: 521 IRQSGAKQSHMEEFTPPSREDRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTE 580
Query: 221 GRYEAEKFRDYWRSVAGAKGRKQDWEATWRNWIRRAAEDKTSSMKHGYQRHEYNSKPMRL 280
+ E W+S AK W++ W D+ S H R ++S L
Sbjct: 581 PKENVEN----WQSSKSAK----RWKSGWEENKSLQQVDEHSKPPHLRHRESWSSTKGIL 632
Query: 281 SPAERSHVFHR 291
SP HR
Sbjct: 633 SPRAPKQQQHR 643
>gi|6624128|gb|AAF19255.1|AC004858_3 (AC004858) U1 small
ribonucleoprotein 1SNRP homolog; match to PID:g4050087
[Homo sapiens]
Length = 784
Score = 37.5 bits (85), Expect = 0.15
Identities = 35/135 (25%), Positives = 55/135 (39%), Gaps = 9/135 (6%)
Query: 76 LQDDGWHNKRCDEEIARFHAKAAAQ--QENGKKGGRPRNSAHHDSQTQTQQKPADFDLDN 133
++ D KR EE+ + A+ + + R A Q Q +Q+P + +
Sbjct: 470 MEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEE 529
Query: 134 PNETQSKANTNPNETQIEPNQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCTGKPKR 193
+ + + P E + EP QKP T PI S+ S S GNAT T
Sbjct: 530 EKQEKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSAS------GNATPNT-PGDE 582
Query: 194 SPHGSRLPDDWAPSE 208
SP G +P + +P +
Sbjct: 583 SPCGIIIPHENSPDQ 597
>gi|4050087 (AF109907) S164 [Homo sapiens]
Length = 735
Score = 37.5 bits (85), Expect = 0.15
Identities = 35/135 (25%), Positives = 55/135 (39%), Gaps = 9/135 (6%)
Query: 76 LQDDGWHNKRCDEEIARFHAKAAAQ--QENGKKGGRPRNSAHHDSQTQTQQKPADFDLDN 133
++ D KR EE+ + A+ + + R A Q Q +Q+P + +
Sbjct: 421 MEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEE 480
Query: 134 PNETQSKANTNPNETQIEPNQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCTGKPKR 193
+ + + P E + EP QKP T PI S+ S S GNAT T
Sbjct: 481 EKQEKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSAS------GNATPNT-PGDE 533
Query: 194 SPHGSRLPDDWAPSE 208
SP G +P + +P +
Sbjct: 534 SPCGIIIPHENSPDQ 548
>gi|786136 (L41833) polymorphic immunodominant molecule [Theileria
parva]
Length = 543
Score = 35.6 bits (80), Expect = 0.56
Identities = 27/92 (29%), Positives = 38/92 (40%), Gaps = 4/92 (4%)
Query: 119 QTQTQQKPADFDLDNPNETQSKANTNPNETQIEPN-QKPTRPQTPDPIISSSLRSEESLV 177
Q QQ+P D P+ ++ T ++ EP QKP QTP+ S S E LV
Sbjct: 299 QPVDQQQPVQ---DQPSGKETPQPTQDDQQVQEPTEQKPEPEQTPEHSPSKDDLSGEELV 355
Query: 178 FAEDGNATGCTGKPKRSPHGSRLPDDWAPSEG 209
+G+ TG P + DD +G
Sbjct: 356 KPSEGHMTGAAADGSGQPPDKKPDDDSKGKDG 387
>gi|3924672|gb|AAC79153.1| (AC004943) alpha-fetoprotein
enhancer-binding protein; 99% identical to A41948
(PID:g283975) [Homo sapiens]
Length = 2553
Score = 35.2 bits (79), Expect = 0.74
Identities = 29/108 (26%), Positives = 44/108 (39%), Gaps = 11/108 (10%)
Query: 55 ARAYSKKEKSAVDVVLDEFFLLQDDGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSA 114
++AYS SA + F L + EE+A F++K A E K P
Sbjct: 1238 SQAYSAPAPSANNTASSAFLQLTAEA-------EELATFNSKTEAGDEKPKLAEAPSAQP 1290
Query: 115 HHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTP 162
+ + Q Q KP +L + + K NT P + + P+ PQ P
Sbjct: 1291 NQTQEKQGQPKP---ELQQQEQPEQKTNT-PQQKLPQLVSLPSLPQPP 1334
>gi|976347 (L32832) zinc finger homeodomain protein [Homo sapiens]
>gi|1585921|prf||2202255A AT motif-binding factor 1 [Homo
sapiens]
Length = 3703
Score = 35.2 bits (79), Expect = 0.74
Identities = 29/108 (26%), Positives = 44/108 (39%), Gaps = 11/108 (10%)
Query: 55 ARAYSKKEKSAVDVVLDEFFLLQDDGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSA 114
++AYS SA + F L + EE+A F++K A E K P
Sbjct: 2388 SQAYSAPAPSANNTASSAFLQLTAEA-------EELATFNSKTEAGDEKPKLAEAPSAQP 2440
Query: 115 HHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTP 162
+ + Q Q KP +L + + K NT P + + P+ PQ P
Sbjct: 2441 NQTQEKQGQPKP---ELQQQEQPEQKTNT-PQQKLPQLVSLPSLPQPP 2484
>gi|5901894|ref|NP_008816.1|| AT-binding transcription factor 1
>gi|283975|pir||A41948 alpha-fetoprotein enhancer-binding
protein - human >gi|219430|dbj|BAA01095| (D10250)
alpha-fetoprotein enhancer binding protein [Homo sapiens]
Length = 2783
Score = 35.2 bits (79), Expect = 0.74
Identities = 29/108 (26%), Positives = 44/108 (39%), Gaps = 11/108 (10%)
Query: 55 ARAYSKKEKSAVDVVLDEFFLLQDDGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSA 114
++AYS SA + F L + EE+A F++K A E K P
Sbjct: 1474 SQAYSAPAPSANNTASSAFLQLTAEA-------EELATFNSKTEAGDEKPKLAEAPSAQP 1526
Query: 115 HHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTP 162
+ + Q Q KP +L + + K NT P + + P+ PQ P
Sbjct: 1527 NQTQEKQGQPKP---ELQQQEQPEQKTNT-PQQKLPQLVSLPSLPQPP 1570
>gi|4006829|gb|AAC95171.1| (AC005970) putative protein kinase
[Arabidopsis thaliana]
Length = 462
Score = 34.8 bits (78), Expect = 0.96
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 100 QQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEP-NQKPTR 158
++++G+ G +PR S+HH Q Q ++P + S +P+ T P N
Sbjct: 389 KEDDGRVGNKPRKSSHHHHHQQQQS-------NHPRSSPSPTTKSPSPTAKSPRNSTENH 441
Query: 159 PQTPDPIISSSLRSE 173
+T ++S LRSE
Sbjct: 442 RRTLRNGVNSPLRSE 456
>gi|4835761|gb|AAD30228.1|AC007202_10 (AC007202) T8K14.10
[Arabidopsis thaliana]
Length = 356
Score = 34.8 bits (78), Expect = 0.96
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 133 NPNETQSKANTNPNETQIEPNQKPTRPQT-PDPIISSS 169
NPN +S +N NP ++ PN P P T P+P SSS
Sbjct: 99 NPNPPESSSNPNPPDSSSNPNSNPNPPVTVPNPPESSS 136
>gi|4063374 (AF088288) caspase-related protein 2A [Caenorhabditis
elegans]
Length = 826
Score = 34.4 bits (77), Expect = 1.3
Identities = 33/138 (23%), Positives = 53/138 (37%), Gaps = 10/138 (7%)
Query: 77 QDDGWHNK---RCDEEIARFHAKAAAQQE----NGKKGGRPRNSAHHDSQTQTQQKPADF 129
+++ W K + +EE A+ A+ E N R + A D ++K A
Sbjct: 399 EEEEWRRKAKEKFEEEAAKNRARERKWAEEHGFNRPIRTRSQKYAEQDRIRYARKKAA-- 456
Query: 130 DLDNPNETQSKANTNPNETQIEPNQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCTG 189
L+ NE +++ + E+ + P P TP P S SL NATG +
Sbjct: 457 -LEQSNEQSNESTDDAVESDSDDVPAPQSPPTPSPADPGPTTSSSSLTQDPASNATGFSD 515
Query: 190 KPKRSPHGSRLPDDWAPS 207
P + P D P+
Sbjct: 516 VPAPQAPPTPSPADPGPT 533
Score = 33.2 bits (74), Expect = 2.8
Identities = 29/102 (28%), Positives = 37/102 (35%), Gaps = 11/102 (10%)
Query: 96 KAAAQQENGKKGGRPRNSAHHDS------QTQTQQKPADFDLDNPNETQSKANTNP--NE 147
KAA +Q N + ++ DS Q+ PAD P + S +P N
Sbjct: 454 KAALEQSNEQSNESTDDAVESDSDDVPAPQSPPTPSPAD---PGPTTSSSSLTQDPASNA 510
Query: 148 TQIEPNQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCTG 189
T P P TP P S SL NATG +G
Sbjct: 511 TGFSDVPAPQAPPTPSPADPGPTTSSSSLTQDPASNATGFSG 552
>gi|5174567|ref|NP_005923.1|| mitochondrial intermediate peptidase
precursor >gi|6093746|sp|Q99797|PMIP_HUMAN MITOCHONDRIAL
INTERMEDIATE PEPTIDASE PRECURSOR (MIP)
>gi|1763642|gb|AAC51231.1| (U80034) mitochondrial
intermediate peptidase precursor [Homo sapiens]
Length = 713
Score = 34.4 bits (77), Expect = 1.3
Identities = 18/47 (38%), Positives = 25/47 (52%), Gaps = 2/47 (4%)
Query: 38 RYYATEQPIPANKAHRIARAYSKKEKSAVDVVLDEFFLLQDDGWHNK 84
R+Y T QP+P N R+ SKK +A D+ L F+ D +H K
Sbjct: 545 RHYQTGQPLPKNMVSRLCE--SKKVCAAADMQLQVFYATLDQIYHGK 589
>gi|6321128|ref|NP_011206.1|YFR016C| Yfr016cp
>gi|1175989|sp|P43597|YFI6_YEAST HYPOTHETICAL 137.7 KD
PROTEIN IN UGS1-FAB1 INTERGENIC REGION
>gi|1084739|pir||S56271 hypothetical protein YFR016c -
yeast (Saccharomyces cerevisiae)
>gi|836771|dbj|BAA09255.1| (D50617) YFR016C
[Saccharomyces cerevisiae]
Length = 1233
Score = 34.4 bits (77), Expect = 1.3
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 31/117 (26%)
Query: 101 QENGKKG---------GRPRNSAHHDSQTQTQQKPADFDLDNPN-----ETQSKANTNPN 146
QE+G K P N D +T+ + FD+D PN ET SK+ N N
Sbjct: 228 QEDGSKNEDIKVNIVQDEPVNVEKMDIRTRNESSDKTFDIDVPNKDNVDETSSKSENNIN 287
Query: 147 ETQIEPNQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCTGKPKRSPHGSRLPDD 203
E + E T P R E ++ +GNA + K + PHG D+
Sbjct: 288 EEKAE----HTLP-----------REENEILNVNEGNA--ASFKHQLEPHGLEAGDE 327
>gi|2980765|emb|CAA18192.1| (AL022198) hypothetical protein
[Arabidopsis thaliana]
Length = 392
Score = 34.0 bits (76), Expect = 1.7
Identities = 42/176 (23%), Positives = 63/176 (34%), Gaps = 17/176 (9%)
Query: 116 HDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTPDP-------IISS 168
HD + + ++ +P S A+ NP+ Q N+K +PQ P + S
Sbjct: 22 HDQTISSSRLRDLYNFQSPPPLSSSASENPDFNQKNNNKKKPKPQYRPPSSLEGVKTVHS 81
Query: 169 SLRSEESLVFAEDGNATGCTG--KPKRSPHG-SRLPDDWAPSEGDVLYATQQGVDGRYE- 224
L + + E + G +PK SP G RL +W + + VDG +
Sbjct: 82 DLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCAPAVNPKVESVDGVEDP 141
Query: 225 --AEKFRDYWRSVAGAK----GRKQDWEATWRNWIRRAAEDKTSSMKHGYQRHEYN 274
EK R + GA RK E RN +R + H YN
Sbjct: 142 KLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYN 197
>gi|4567275|gb|AAD23688.1|AC006841_21 (AC006841) hypothetical
protein [Arabidopsis thaliana]
Length = 1003
Score = 34.0 bits (76), Expect = 1.7
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 105 KKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTPDP 164
KKG PR + ++++ K + P TQ K ++N + QK T + PDP
Sbjct: 870 KKG--PREESKEEAKSNIAVKDNAAEKKRPIRTQEKPSSNKKGQLMR--QKETT-EKPDP 924
Query: 165 IISSSLRSEESLVFAEDGNATGCTGKPKRSPHG 197
IS L F ED G+ KR G
Sbjct: 925 KISKDLSEPRKRKFGEDRGEENRNGQRKRKKQG 957
>gi|4768867|gb|AAD29661.1|AF124757_21 (AF124757) outer membrane
protein [Zymomonas mobilis]
Length = 922
Score = 34.0 bits (76), Expect = 1.7
Identities = 39/179 (21%), Positives = 67/179 (36%), Gaps = 24/179 (13%)
Query: 36 LDRYYATEQPIPANKAHRIARAYSKKEKSAVDVVLDEFFLLQDDGWHNKRCDEEIARFHA 95
+D +T +++A +A S EKS+VD L+ + A +
Sbjct: 43 IDTTNSTNDGASSSEAVSSGQATSDVEKSSVDSTLNSTVETAKAVTRQAKTKASHAAKNV 102
Query: 96 KAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNE---TQIEP 152
K A Q +S +D T T+ + LD+P + KAN N T+
Sbjct: 103 KEAVQ-----------DSVSNDKNTVTKTIEQNTPLDSPPVAE-KANANTTSDTATEDAS 150
Query: 153 NQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCTGKPKRSPHGSRLPDDWAPSEGDV 211
NQ T P TP+ ++ V A + G P + + S + P++ ++
Sbjct: 151 NQNNTAPATPE---------NQNQVEATSSSNAGAAASPAENSNASATSEKTTPTQDNI 200
>gi|6322035|ref|NP_012110.1|UBP7| Ubiquitin-specific protease; Ubp7p
>gi|731044|sp|P40453|UBP7_YEAST UBIQUITIN
CARBOXYL-TERMINAL HYDROLASE 7 (UBIQUITIN THIOLESTERASE
7) (UBIQUITIN-SPECIFIC PROCESSING PROTEASE 7)
(DEUBIQUITINATING ENZYME 7) >gi|626306|pir||S48378
probable membrane protein YIL156w - yeast (Saccharomyces
cerevisiae) >gi|557767|emb|CAA86122| (Z38059) orf, len:
1071, CAI: 0.13, some similarity with ubiquitin carboxy
terminal hydrolases [Saccharomyces cerevisiae]
Length = 1071
Score = 33.6 bits (75), Expect = 2.2
Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 9/149 (6%)
Query: 39 YYATEQPIPAN--KAHRIARAYSKKEK--SAVDVVLDEFFLLQDDGWHNKRCDEEIARFH 94
+Y IP K ++ R+ K+ K +++ + L ++ W RC +
Sbjct: 790 FYVLSLAIPRRSMKLSKLGRSTEKRVKLEDCINMFTSDEVLSGENAWDCPRCGPTASVST 849
Query: 95 AKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQ 154
+ +A + E + + S T T+++ DF D E + N N + E ++
Sbjct: 850 SVSALENEPSIVKSKKKKSRFFTLHTGTKRRHLDFFGDGITEGHNSNNNNTTIFERERSR 909
Query: 155 KPTRPQTPDPIISSSLRSEESLVFAEDGN 183
P R + S RS S F+ GN
Sbjct: 910 SPFR-----MLGGSGKRSSSSTPFSTGGN 933
>gi|5525059|emb|CAB50875.1| (AL096844) putative integral membrane
protein [Streptomyces coelicolor A3(2)]
Length = 684
Score = 33.6 bits (75), Expect = 2.2
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 152 PNQKPTRPQTP----DPIISSSLRSEESLVFAEDGNATGCTGKPKRSPHGSRLPDDWA-P 206
P P RP TP DP + LRS E E G A G G P G+ D W+ P
Sbjct: 504 PAPGPYRPGTPHRPPDPGANPYLRSWEGAARPESGTAPGTGGPEDARPAGAAPRDAWSLP 563
Query: 207 SEGDVLYATQ-QGVDGRYEAEKFR 229
G Q G G+ +A+ R
Sbjct: 564 GPGHTASGAQPPGSTGQGQADPAR 587
>gi|2130461|pir||S55785 nucleolar protein gar2 - fission yeast
(Schizosaccharomyces pombe) >gi|663262|emb|CAA88179|
(Z48166) gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 33.2 bits (74), Expect = 2.8
Identities = 19/94 (20%), Positives = 46/94 (48%)
Query: 84 KRCDEEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANT 143
K +EIA+ +K + KK + +S ++ +QK + ++ +E++S++++
Sbjct: 34 KEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSS 93
Query: 144 NPNETQIEPNQKPTRPQTPDPIISSSLRSEESLV 177
+ +E+ ++ + SSS SEE ++
Sbjct: 94 SESESSSSESESSSSESESSSSESSSSESEEEVI 127
>gi|1200129|emb|CAA88906| (Z49081) alpha-adducin, hypertensive
phenotype [Rattus norvegicus]
Length = 735
Score = 33.2 bits (74), Expect = 2.8
Identities = 29/101 (28%), Positives = 44/101 (42%), Gaps = 17/101 (16%)
Query: 106 KGGRPRNSAHHDSQTQTQQKPADFDL--DNPNE------TQSKANTNPNETQIEPNQKPT 157
+GG P+ D T KP DL D P+E +A+ +P+ TQ P
Sbjct: 619 EGGLPQEPTSRDGSDATTSKPTPPDLSPDEPSEALAFPTVAEEAHASPDTTQ------PL 672
Query: 158 RPQTPDPIISSSLRSEE-SLVFAEDGNA--TGCTGKPKRSP 195
P+P +S+ +EE + E+G+ G G P +SP
Sbjct: 673 AEADPEPASASAPGAEEVASPATEEGSPMDPGSDGSPGKSP 713
>gi|3861436|emb|CAA22041| (AL033505) hypothetical protein SC1E6.13
[Streptomyces coelicolor]
Length = 376
Score = 33.2 bits (74), Expect = 2.8
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 78 DDGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNET 137
DDGW + D E+ R H A A++E R + Q Q+ ++D + E
Sbjct: 270 DDGWRGEIRDGEVVRSHEDAVAEEE------EERQAEQEPEQEPEQEPEGEYDEEAEGEP 323
Query: 138 QSKANTNPNETQIEPNQ 154
+ + EP +
Sbjct: 324 EEEYEEAAESEYAEPEE 340
>gi|633620|emb|CAA58690| (X83715) alpha adducin [Rattus norvegicus]
Length = 310
Score = 33.2 bits (74), Expect = 2.8
Identities = 29/101 (28%), Positives = 44/101 (42%), Gaps = 17/101 (16%)
Query: 106 KGGRPRNSAHHDSQTQTQQKPADFDL--DNPNE------TQSKANTNPNETQIEPNQKPT 157
+GG P+ D T KP DL D P+E +A+ +P+ TQ P
Sbjct: 194 EGGLPQEPTSRDGSDATTSKPTPPDLSPDEPSEALGFPTVAEEAHASPDTTQ------PL 247
Query: 158 RPQTPDPIISSSLRSEE-SLVFAEDGNA--TGCTGKPKRSP 195
P+P +S+ +EE + E+G+ G G P +SP
Sbjct: 248 AEADPEPASASAPGAEEVASPATEEGSPMDPGSDGSPGKSP 288
>gi|3941737|gb|AAC82480.1|AAC82480 (AF109719) BAT2 [Mus musculus]
Length = 2157
Score = 33.2 bits (74), Expect = 2.8
Identities = 23/89 (25%), Positives = 35/89 (38%), Gaps = 7/89 (7%)
Query: 78 DDGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNET 137
DDGW EE+ + +E+G+ H DSQ+ ++P + D T
Sbjct: 323 DDGWAGAH--EEVDYTEKLKFSDEEDGRDSDEEGAEGHKDSQSAAAEEP---ETDGKKGT 377
Query: 138 QSKANTNPNETQIEPNQKP--TRPQTPDP 164
+ P +T N +P T P P P
Sbjct: 378 SPGSELPPPKTAWTENARPSETEPAPPTP 406
>gi|6226864|sp|P41891|GAR2_SCHPO GAR2 PROTEIN
>gi|2398808|emb|CAB11772.1| (Z99091) pre-ribopsomal
particle assembly protein. [Schizosaccharomyces pombe]
Length = 500
Score = 33.2 bits (74), Expect = 2.8
Identities = 19/94 (20%), Positives = 46/94 (48%)
Query: 84 KRCDEEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANT 143
K +EIA+ +K + KK + +S ++ +QK + ++ +E++S++++
Sbjct: 34 KEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSS 93
Query: 144 NPNETQIEPNQKPTRPQTPDPIISSSLRSEESLV 177
+ +E+ ++ + SSS SEE ++
Sbjct: 94 SESESSSSESESSSSESESSSSESSSSESEEEVI 127
>gi|3947714|emb|CAA05919| (AJ003164) initiation factor IF2
[Streptococcus agalactiae]
Length = 927
Score = 33.2 bits (74), Expect = 2.8
Identities = 23/77 (29%), Positives = 33/77 (41%), Gaps = 2/77 (2%)
Query: 88 EEIARFHAKAAAQQENG--KKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNP 145
E AR A+A +Q NG +K R ++ D + Q Q++ DN Q+ N N
Sbjct: 104 EREARAKAEAEKRQHNGDHRKNNRHNDTRSDDRRHQGQKRSNGNRNDNRQGQQNNRNKND 163
Query: 146 NETQIEPNQKPTRPQTP 162
+ TRPQ P
Sbjct: 164 GRYADHKQKPQTRPQQP 180
>gi|2134123|pir||I51618 nucleolar phosphoprotein - African clawed
frog >gi|895921|emb|CAA61368| (X88927) nucleolar
phosphoprotein [Xenopus laevis]
>gi|1585694|prf||2201454A nucleolar phosphoprotein
Nopp180 [Xenopus laevis]
Length = 990
Score = 33.2 bits (74), Expect = 2.8
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 136 ETQSKANTNPNETQIEPNQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCTGKPKRSP 195
E+ S+++ + +E Q N T+ P +++ SEES ++G A G +GK KR
Sbjct: 820 ESSSESSDSEDEKQGGKNTSTTKIANSTPKAAAAECSEESSSSEDEGKANGTSGKRKRES 879
Query: 196 HGS 198
G+
Sbjct: 880 TGN 882
>gi|4454009|emb|CAA23062| (AL035396) putative protein [Arabidopsis
thaliana]
Length = 368
Score = 33.2 bits (74), Expect = 2.8
Identities = 18/78 (23%), Positives = 39/78 (49%), Gaps = 8/78 (10%)
Query: 88 EEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNE 147
EE+ ++ ++E+G G +SA + ++ QKP + D+ E++S++++ P
Sbjct: 7 EEVVESPPVSSEEEESGSSGEESESSAEVPKKVESSQKP---ESDSEGESESESSSGP-- 61
Query: 148 TQIEPNQKPTRPQTPDPI 165
EP +P + P+
Sbjct: 62 ---EPESEPAKTIKLKPV 76
>gi|5924068|gb|AAD56435.1|AF162863_3 (AF162863) TpgX [Staphylococcus
epidermidis]
Length = 140
Score = 33.2 bits (74), Expect = 2.8
Identities = 24/118 (20%), Positives = 57/118 (47%), Gaps = 9/118 (7%)
Query: 96 KAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKA---NTNPNETQIEP 152
+++ + ++ K + ++S+ HDS+ +++ + DN +K N NPN+ +
Sbjct: 25 ESSHKDDSSKTEQKDKSSSQHDSKKDSKRNDTNNKQDNQENNTNKEQTNNQNPNDGEQRT 84
Query: 153 NQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCTGKPKRSPHGSRLPDDWAPSEGD 210
+++PT + SS ++++ ++ N P +S + +R+ +P EGD
Sbjct: 85 SERPTTNSNGN---SSDNQNKQQQSVQDNQNKYVA---PYQSENATRVARCLSPFEGD 136
>gi|6907096|dbj|BAA90623.1| (AP001129) ESTs
AU033004(S0924),C74754(E50863) correspond to a region of
the predicted gene.; Similar to Rat mRNA for
dihydrolipoamide acetyltransferase. (D10655) [Oryza
sativa]
Length = 502
Score = 33.2 bits (74), Expect = 2.8
Identities = 31/120 (25%), Positives = 53/120 (43%), Gaps = 17/120 (14%)
Query: 128 DFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGC 187
D+ + E+ + A + P EP ++ +P+ P+P + ++EES + +ED
Sbjct: 165 DYKAPSSAESAAPAESKPQSEPTEPKKEKEQPKAPEP---KATKTEESFL-SED------ 214
Query: 188 TGKPKRSPHGSRLPDDWAPSEGDVLYATQQGVDGRYEAEKFRDYWRSVAGAKGRKQDWEA 247
+ SP +L +D + + G DGR DY SV AKG K++ A
Sbjct: 215 --RTFSSPIARKLAED---NNVPLSSIKGTGPDGRILKADIEDYLASV--AKGAKKETAA 267
>gi|128146|sp|P16053|NFM_CHICK NEUROFILAMENT TRIPLET M PROTEIN (160
KD NEUROFILAMENT PROTEIN) (NF-M) >gi|104796|pir||S15762
neurofilament triplet M protein - chicken
>gi|63689|emb|CAA34958| (X17102) NF-M protein [Gallus
gallus]
Length = 858
Score = 32.8 bits (73), Expect = 3.7
Identities = 20/81 (24%), Positives = 37/81 (44%), Gaps = 2/81 (2%)
Query: 89 EIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNET 148
E A+ KAAA+ +K + A + + + +KPA + +P + + E
Sbjct: 590 EQAKAVQKAAAEVGKDQKAEKAAEKAAKEEKAASPEKPATPKVTSPEKPATPEKPPTPEK 649
Query: 149 QIEPN--QKPTRPQTPDPIIS 167
I P + P +P TP+ ++S
Sbjct: 650 AITPEKVRSPEKPTTPEKVVS 670
>gi|6320976|ref|NP_011055.1|PAK1| DNA polymerase alpha suppressing
protein kinase; Pak1p >gi|730268|sp|P38990|PAK1_YEAST
SERINE/THREONINE-PROTEIN KINASE PAK1
>gi|1078305|pir||S50632 protein kinase PAK1 (EC 2.7.1.-)
- yeast (Saccharomyces cerevisiae) >gi|603368 (U18916)
Pak1p: DNA polymerase alpha suppressing protein kinase
[Saccharomyces cerevisiae]
Length = 1142
Score = 32.8 bits (73), Expect = 3.7
Identities = 24/89 (26%), Positives = 43/89 (47%), Gaps = 11/89 (12%)
Query: 107 GGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEP--NQKPTRP----- 159
G + RNS+++++ ++T+ P +F +D+ + + PNE QI P + +P R
Sbjct: 861 GTQSRNSSNNNAYSETESLPFEFGVDSEDGSGVLLRDLPNEDQIRPFLDIQPCRRMKVKS 920
Query: 160 ----QTPDPIISSSLRSEESLVFAEDGNA 184
+ P SSS S+E + G A
Sbjct: 921 SLNLEPPSVSSSSSSSSDEDELILNVGTA 949
>gi|86387|pir||S08061 neurofilament triplet M protein - chicken
Length = 846
Score = 32.8 bits (73), Expect = 3.7
Identities = 20/81 (24%), Positives = 37/81 (44%), Gaps = 2/81 (2%)
Query: 89 EIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNET 148
E A+ KAAA+ +K + A + + + +KPA + +P + + E
Sbjct: 578 EQAKAVQKAAAEVGKDQKAEKAAEKAAKEEKAASPEKPATPKVTSPEKPATPEKPPTPEK 637
Query: 149 QIEPN--QKPTRPQTPDPIIS 167
I P + P +P TP+ ++S
Sbjct: 638 AITPEKVRSPEKPTTPEKVVS 658
>gi|6680736|ref|NP_031522.1|| AT motif binding factor 1
>gi|1345408|dbj|BAA05046| (D26046) AT motif-binding
factor [Mus musculus] >gi|1587706|prf||2207230A
transcription factor ATBF1 [Mus musculus]
Length = 3726
Score = 32.8 bits (73), Expect = 3.7
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 88 EEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNE 147
+E+A F++KA A E K+ P + + Q Q KP ++ E Q + TN +
Sbjct: 2423 DELATFNSKAEASDEKPKQADPPSAQPNQTQEKQGQPKP---EMQQQLE-QLEQKTNAPQ 2478
Query: 148 TQIEPNQKPTRPQTP 162
++ P+ PQ P
Sbjct: 2479 PKLPQPAAPSLPQPP 2493
>gi|2623666 (AF030429) dentatorubro-pallidoluysian atrophy protein
[Canis familiaris]
Length = 108
Score = 32.8 bits (73), Expect = 3.7
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 104 GKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQT-P 162
G+ G P HH Q QQ+P P + Q + + Q + P P P
Sbjct: 13 GQSTGHPPAPTHHHHHQQQQQQPPPQSQQRPQQQQQQQQQQQQQQQHHGSSGPPPPGAYP 72
Query: 163 DPIISSS 169
P+ SSS
Sbjct: 73 HPLESSS 79
>gi|4557449|ref|NP_001262.1|| chromodomain helicase DNA binding
protein 2 >gi|3182950|sp|O14647|CHD2_HUMAN
CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 2 (CHD-2)
>gi|2645431 (AF006514) CHD2 [Homo sapiens]
Length = 1739
Score = 32.8 bits (73), Expect = 3.7
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 14/168 (8%)
Query: 83 NKRCDEEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKAN 142
+ R +E +RF+ K A +G + G P+ Q + Q+K ++ E + A
Sbjct: 112 SNRSRQEPSRFNIKEEA--SSGSESGSPKRRGQR--QLKKQEKWKQEPSEDEQEQGTSAE 167
Query: 143 TNPNETQIEPNQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCTG--KPKRSPH---- 196
+ P + +++ + R P P + +++ +D + PKR
Sbjct: 168 SEPEQKKVKARRPVPRRTVPKPRVKKQPKTQRGKRKKQDSSDEDDDDDEAPKRQTRRRAA 227
Query: 197 ---GSRLPDDWAPSEGDVLYATQQGVDGRYE-AEKFRDYWRSVAGAKG 240
+ DD+ D++ T +GVD + + +E S G KG
Sbjct: 228 KNVSYKEDDDFETDSDDLIEMTGEGVDEQQDNSETIEKVLDSRLGKKG 275
>gi|86388|pir||A27040 neurofilament triplet M protein - chicken
(fragment) >gi|63686|emb|CAA29073| (X05558) NF-M
c-terminus [Gallus gallus]
Length = 509
Score = 32.8 bits (73), Expect = 3.7
Identities = 20/81 (24%), Positives = 37/81 (44%), Gaps = 2/81 (2%)
Query: 89 EIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNET 148
E A+ KAAA+ +K + A + + + +KPA + +P + + E
Sbjct: 241 EQAKAVQKAAAEVGKDQKAEKAAEKAAKEEKAASPEKPATPKVTSPEKPATPEKPPTPEK 300
Query: 149 QIEPN--QKPTRPQTPDPIIS 167
I P + P +P TP+ ++S
Sbjct: 301 AITPEKVRSPEKPTTPEKVVS 321
>gi|2981173 (AF053711) neurofilament medium subunit [Serinus
canaria]
Length = 487
Score = 32.8 bits (73), Expect = 3.7
Identities = 20/81 (24%), Positives = 37/81 (44%), Gaps = 2/81 (2%)
Query: 89 EIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNET 148
E A+ KAAA+ +K + A + + + +KPA + +P + + E
Sbjct: 219 EQAKAVQKAAAEVGKDQKAEKAAEKAAKEEKAASPEKPATPKVTSPEKPATPEKPPTPEK 278
Query: 149 QIEPN--QKPTRPQTPDPIIS 167
I P + P +P TP+ ++S
Sbjct: 279 AITPEKVRSPEKPTTPEKVVS 299
>gi|6689255|emb|CAA21914.2| (AL033389) hypothetical dnaJ protein
[Schizosaccharomyces pombe]
Length = 551
Score = 32.8 bits (73), Expect = 3.7
Identities = 15/63 (23%), Positives = 30/63 (46%), Gaps = 2/63 (3%)
Query: 239 KGRKQDWEATWRNWIRRAAE--DKTSSMKHGYQRHEYNSKPMRLSPAERSHVFHRPFDLR 296
KG+ W + + + ++ E +K S ++ +N KP E SH+++ +D R
Sbjct: 108 KGKNSKWSSPFASTTKKPQESSEKYSKKSSTRKKEHFNKKPSFPRDTEYSHIYNMKYDPR 167
Query: 297 DGV 299
G+
Sbjct: 168 SGI 170
>gi|126374|sp|P29362|LMP1_EBVC LATENT MEMBRANE PROTEIN 1 (LMP-1)
(P63) >gi|74053|pir||LABECA latent membrane protein -
human herpesvirus 4 (strain CAO) >gi|106888|pir||S21660
latent membrane protein LMP1 - human
>gi|22938|emb|CAA41148| (X58140) latent membrane protein
LMP1 [Human herpesvirus 4] >gi|221797|dbj|BAA00948|
(D10059) LMP1 [Human herpesvirus 4]
Length = 404
Score = 32.5 bits (72), Expect = 4.9
Identities = 26/94 (27%), Positives = 30/94 (31%), Gaps = 9/94 (9%)
Query: 78 DDGWHNKRCDEEIARFHAKAAA--------QQENGKKGGRPRNSAHHDSQTQTQQKPADF 129
DD H + R H + Q G GG P N T P D
Sbjct: 209 DDSSHESDSNSNEGRHHLLVSGAGDGPPLCSQNLGAPGGGPDNGPQDPDNTD-DNGPQDP 267
Query: 130 DLDNPNETQSKANTNPNETQIEPNQKPTRPQTPD 163
D + N Q NT+ N Q N PQ PD
Sbjct: 268 DNTDDNGPQDPDNTDDNGPQDPDNTDDNGPQDPD 301
>gi|755081 (L41148) schizont/sporozoite surface protein [Theileria
parva] >gi|1586007|prf||2202316A predominant antigen
[Theileria parva]
Length = 277
Score = 32.5 bits (72), Expect = 4.9
Identities = 23/105 (21%), Positives = 40/105 (37%), Gaps = 1/105 (0%)
Query: 98 AAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPT 157
A Q G N+ S TQ D + +ET + P++ Q +P+Q
Sbjct: 3 AQQSGGGSNNNEGNNNDSTGSSDVTQVDTESNDTSSSSETSQQGKPQPDQPQDQPDQH-Q 61
Query: 158 RPQTPDPIISSSLRSEESLVFAEDGNATGCTGKPKRSPHGSRLPD 202
+P D + ++ V +DG + T +P+ P P+
Sbjct: 62 QPTQGDTSGQQGQQPQDQPVQEQDGQDSQGTPEPQPEPQPEPQPE 106
>gi|5902104|ref|NP_008872.1|| SRY (sex-determining region Y)-box 10
>gi|6175075|sp|P56693|SX10_HUMAN TRANSCRIPTION FACTOR
SOX-10 >gi|2909360|emb|CAA04576| (AJ001183) Sox10
protein [Homo sapiens]
Length = 466
Score = 32.5 bits (72), Expect = 4.9
Identities = 26/94 (27%), Positives = 35/94 (36%), Gaps = 7/94 (7%)
Query: 98 AAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPT 157
AAQ E GG + Q K A D +P E ++ NP + + PT
Sbjct: 183 AAQGEAECPGGEAEQGG--TAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT 240
Query: 158 RPQTPDPIISSSLRSEESLVFAEDGNATGCTGKP 191
P TP + S + DG + G GKP
Sbjct: 241 PPTTPKTELQSGKADPK-----RDGRSMGEGGKP 269
>gi|4704830|gb|AAD28290.1|AF139380_1 (AF139380) LlDD2T15 [Lupinus
luteus] >gi|4704832|gb|AAD28291.1|AF139381_1 (AF139381)
LlDD2T15-L [Lupinus luteus]
Length = 191
Score = 32.5 bits (72), Expect = 4.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 270 RHEYNSKPMRLSPAERSHVFHRPFDLRDG 298
R+EYNS+ R +P++ SH+ PF+ DG
Sbjct: 106 RYEYNSQSTRRNPSKLSHISGGPFEEEDG 134
>gi|4874305|gb|AAD31367.1|AC006053_9 (AC006053) unknown protein
[Arabidopsis thaliana]
Length = 318
Score = 32.5 bits (72), Expect = 4.9
Identities = 26/122 (21%), Positives = 49/122 (39%), Gaps = 4/122 (3%)
Query: 41 ATEQPIPANKAHRIARAYSKKEKSAVDVVLDEFFLLQDDGWHNKRCDEEIARFHAKAAAQ 100
A E P P +A R +K+K ++ LL D G K + A +
Sbjct: 144 APEVPAPPKEAERQLSKKERKKKELAELEA----LLADFGVAPKENNGLEESQEAGQEKK 199
Query: 101 QENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQ 160
++ +G + N+A +S+ ++K D + + +AN N + +PT +
Sbjct: 200 EDVNGEGEKKENAAGGESKASKKKKKKDKQKEVKESQEQQANNNADAVDEAAGSEPTEEE 259
Query: 161 TP 162
+P
Sbjct: 260 SP 261
>gi|254751|bbs|112414 (S45044) BR6=Balbiani ring [Chironomus
tentans=midges, Peptide Partial, 267 aa] [Chironomus
tentans]
Length = 267
Score = 32.5 bits (72), Expect = 4.9
Identities = 40/167 (23%), Positives = 71/167 (41%), Gaps = 38/167 (22%)
Query: 2 SEGGCMNYYERHIGDYARDTGYLSVLEHGIYCLLLDRYYATEQPI---PANKAHRIARAY 58
++GG YY+ DY D Y S Y + Y E PA K + +A
Sbjct: 81 NDGG--EYYDDEYYDY--DDEYYSDEYDNEYEYEYEYEYEYEDETTIKPAGKKGKDNKAL 136
Query: 59 SKKEKSAVD--VVLDEFFLLQDDGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSAHH 116
+ +E+ +D +++DE D ++ +E I R KKG
Sbjct: 137 NPEEEEYIDEDLIVDE----NSDEEEDEISEEIIKR------------KKG--------- 171
Query: 117 DSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTPD 163
QT+ +++ ++ D+ ++ + NP E QI+ ++KP RP+ P+
Sbjct: 172 -KQTKKEEESSE---DSESDKTEEETENPKEEQIQYSEKPERPERPE 214
>gi|5732083|gb|AAD48982.1|AF162444_14 (AF162444) similar to a family
of Arabidopsis thaliana hypothetical proteins; see
GB:U95973
Length = 681
Score = 32.5 bits (72), Expect = 4.9
Identities = 20/59 (33%), Positives = 29/59 (48%), Gaps = 14/59 (23%)
Query: 129 FDLDNPNETQSKANTNPNET---------QIEPNQKPTRPQTPDPIIS-----SSLRSE 173
F+ ++ NET+ + T +ET + P T PQTP P +S SSLRS+
Sbjct: 266 FETEHENETEDHSETTTSETDSTESSPKEDVPPPPPLTSPQTPSPTVSTFNTKSSLRSQ 324
>gi|310893 (L06323) membrane protein [Theileria parva]
Length = 480
Score = 32.1 bits (71), Expect = 6.4
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 15/100 (15%)
Query: 115 HHD----SQTQTQQKPADFDLDNPNETQSKANTNPN-ETQIEPNQKPTRPQTPDPIISSS 169
HH +Q QTQ +P E Q + P E Q EP Q+P QTP+ S
Sbjct: 235 HHQPTPAAQPQTQPQP---------EPQPEPQPEPQPEPQPEPVQEPPE-QTPEHTPSKD 284
Query: 170 LRSEESLVFAEDGNATGCTGKPKRSPHGSRLPDDWAPSEG 209
S E V +G+ TG P + DD +G
Sbjct: 285 DASGEVPVKPSEGHMTGAAADGSGQPPDKKTDDDSKGKDG 324
>gi|548996|sp|Q01443|SSP2_PLAYO SPOROZOITE SURFACE PROTEIN 2
PRECURSOR >gi|323142|pir||A45559 sporozoite surface
protein 2 - Plasmodium yoelii >gi|160693 (M84732)
sporozoite surface protein [Plasmodium yoelii]
Length = 826
Score = 32.1 bits (71), Expect = 6.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 103 NGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTP 162
N K +P + + ++ KP + NPN+ +NPN+ PN+ P+ P P
Sbjct: 402 NKPKPNKPNPNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPSNPNKP--NPNE-PSNPNKP 458
Query: 163 DP 164
+P
Sbjct: 459 NP 460
>gi|134817|sp|P22698|SPG7_DICDI SPORE GERMINATION PROTEIN 270-11
>gi|84148|pir||B35621 spore germination protein 270-11 -
slime mold (Dictyostelium discoideum) >gi|167881
(M33862) cellulose binding protein [Dictyostelium
discoideum]
Length = 532
Score = 32.1 bits (71), Expect = 6.4
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query: 126 PADFDLDNPNETQSKANTN-PNETQIE-PNQKPTRPQTPDPIISSSLRSEESLVFAEDGN 183
P + P ET ++ T P ET E P + PT +TP P SSS +S +E
Sbjct: 338 PTPTPTETPTETPTETPTETPTETPTETPTETPTETETPTPTPSSSSSDVDSGSSSEIET 397
Query: 184 ATGC-TGKPKRSPHGSRLPDDWAPSE 208
T T P +P S + SE
Sbjct: 398 PTPTETDTPTPTPSSSSSEGSGSSSE 423
>gi|121351|sp|P00965|GLN3_PHAVU GLUTAMINE SYNTHETASE N-1 (ISOZYME
GAMMA) (GLUTAMATE--AMMONIA LIGASE) >gi|68591|pir||AJFBQ
glutamate--ammonia ligase (EC 6.3.1.2) gamma, cytosolic
- kidney bean >gi|21009|emb|CAA32759| (X14605) glutamine
synthetase (AA 1-356) [Phaseolus vulgaris]
>gi|227924|prf||1713434A Gln synthetase:SUBUNIT=gamma
[Phaseolus vulgaris]
Length = 356
Score = 32.1 bits (71), Expect = 6.4
Identities = 19/56 (33%), Positives = 27/56 (47%), Gaps = 8/56 (14%)
Query: 34 LLLDRYYATEQPIPANKAHRIARAYSKKEKSAVDV---VLDEFFLLQDD-----GW 81
++ D Y +PIP NK H A+ +S E A + + E+ LLQ D GW
Sbjct: 90 VMCDAYTPAGEPIPTNKRHNAAKIFSNPEVVAEEPWYGIEQEYTLLQKDVQWPVGW 145
>gi|347377 (L22179) MLL-AF4 der(11) fusion protein [Homo sapiens]
>gi|449754|prf||1919460A MLL-AF4 fusion protein [Homo
sapiens]
Length = 2311
Score = 32.1 bits (71), Expect = 6.4
Identities = 30/129 (23%), Positives = 53/129 (40%), Gaps = 8/129 (6%)
Query: 41 ATEQPIPANKAHRIARAYSKKEKSAVDVVLDEFFLLQDDGWHNKRCDEEIARFHAKAAAQ 100
+++Q IPA+ HRI + + + V V +E W + H + A
Sbjct: 1429 SSKQKIPADGVHRIRVDFKQTYSNEVHCV-EEILKEMTHSW-----PPPLTAIHTPSTA- 1481
Query: 101 QENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQ 160
E K ++S H S TQ Q++ + N Q ++ ++ Q+ ++ Q
Sbjct: 1482 -EPSKFPFPTKDSQHVSSVTQNQKQYDTSSKTHSNSQQGTSSMLEDDLQLSDSEDSDSEQ 1540
Query: 161 TPDPIISSS 169
TP+ SSS
Sbjct: 1541 TPEKPPSSS 1549
>gi|1076926|pir||S52837 slt1 protein - fission yeast
(Schizosaccharomyces pombe)
Length = 433
Score = 32.1 bits (71), Expect = 6.4
Identities = 36/134 (26%), Positives = 55/134 (40%), Gaps = 28/134 (20%)
Query: 87 DEEIARFHAKA------AAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSK 140
DEE++R AAQ+ + K+G N+ H T + F SK
Sbjct: 230 DEELSRTELAELNDYLLAAQRRSNKRG----NARKHIDLTARESPSTSF------AQMSK 279
Query: 141 ANTNPNETQIEPNQKPTRPQTP-DPIIS-------SSLRSEESLVFAEDG----NATGCT 188
NP+ IEP +PT + P + ++S SS R ES+ +DG +T
Sbjct: 280 GRLNPDPEVIEPEDEPTTFRNPLEALLSTGQYSVVSSSRDVESVRDFDDGTLPITSTQTV 339
Query: 189 GKPKRSPHGSRLPD 202
+P + G +L D
Sbjct: 340 EEPIDTKAGEKLTD 353
>gi|1177024|sp|P42694|Y054_HUMAN HYPOTHETICAL PROTEIN KIAA0054
>gi|473951|dbj|BAA06147| (D29677) KIAA0054 [Homo sapiens]
Length = 1942
Score = 32.1 bits (71), Expect = 6.4
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 101 QENGKKGGRPRNSAHHD----SQTQTQQKPADFDLDNPNETQSKANTNPNETQIE-PNQK 155
Q +G+ P HH Q Q Q + D N N N+ P +I P +K
Sbjct: 1241 QTHGRGSPIPYGLGHHPPVTIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKK 1300
Query: 156 PTRPQTPDPIISSSLRSEES 175
PT P+ D + RS ES
Sbjct: 1301 PTEPKQVDLESNPQNRSPES 1320
>gi|3024655|sp|O09141|SX21_MOUSE TRANSCRIPTION FACTOR SOX-21
(TRANSCRIPTION FACTOR SOX-M) >gi|1872475 (U66141)
transcription factor Sox-M [Mus musculus]
Length = 533
Score = 32.1 bits (71), Expect = 6.4
Identities = 26/94 (27%), Positives = 35/94 (36%), Gaps = 7/94 (7%)
Query: 98 AAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPT 157
AAQ E GG + Q K A D +P E ++ NP + + PT
Sbjct: 277 AAQGEAECPGGEAEQGGA--AAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPT 334
Query: 158 RPQTPDPIISSSLRSEESLVFAEDGNATGCTGKP 191
P TP + S + DG + G GKP
Sbjct: 335 PPTTPKTELQSGKADPK-----RDGRSLGEGGKP 363
>gi|2826523 (AF017182) putative transcription factor; SOX10 [Mus
musculus]
Length = 582
Score = 32.1 bits (71), Expect = 6.4
Identities = 26/94 (27%), Positives = 35/94 (36%), Gaps = 7/94 (7%)
Query: 98 AAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPT 157
AAQ E GG + Q K A D +P E ++ NP + + PT
Sbjct: 299 AAQGEAECPGGEAEQGGA--AAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPT 356
Query: 158 RPQTPDPIISSSLRSEESLVFAEDGNATGCTGKP 191
P TP + S + DG + G GKP
Sbjct: 357 PPTTPKTELQSGKADPK-----RDGRSLGEGGKP 385
>gi|2911897 (AF047653) No definition line found [Caenorhabditis
elegans]
Length = 388
Score = 32.1 bits (71), Expect = 6.4
Identities = 21/97 (21%), Positives = 39/97 (39%), Gaps = 4/97 (4%)
Query: 97 AAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQK- 155
+++ +++G P + A ++ T +P + S AN P+E
Sbjct: 145 SSSVEQSGSLPPLPESPASQANRESTSAQPRLDQIPEDPSEASMANQTPSEQSSRDRDSQ 204
Query: 156 ---PTRPQTPDPIISSSLRSEESLVFAEDGNATGCTG 189
P+R DP+ S L ++S+ D A+ TG
Sbjct: 205 CSCPSRAPVEDPVASFELNDKDSISIPSDSGASLRTG 241
>gi|283464|pir||A60540 sporozoite surface protein 2 - Plasmodium
yoelii (fragment)
Length = 477
Score = 32.1 bits (71), Expect = 6.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 103 NGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTP 162
N K +P + + ++ KP + NPN+ +NPN+ PN+ P+ P P
Sbjct: 180 NKPKPNKPNPNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPSNPNKP--NPNE-PSNPNKP 236
Query: 163 DP 164
+P
Sbjct: 237 NP 238
>gi|6175076|sp|Q04888|SX10_MOUSE TRANSCRIPTION FACTOR SOX-10
>gi|3264586 (AF047043) Sox-10 protein [Mus musculus]
Length = 466
Score = 32.1 bits (71), Expect = 6.4
Identities = 26/94 (27%), Positives = 35/94 (36%), Gaps = 7/94 (7%)
Query: 98 AAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPT 157
AAQ E GG + Q K A D +P E ++ NP + + PT
Sbjct: 183 AAQGEAECPGGEAEQGGA--AAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPT 240
Query: 158 RPQTPDPIISSSLRSEESLVFAEDGNATGCTGKP 191
P TP + S + DG + G GKP
Sbjct: 241 PPTTPKTELQSGKADPK-----RDGRSLGEGGKP 269
>gi|5852089|emb|CAB55396.1| (AL117264) zwh12.1 [Oryza sativa]
Length = 1017
Score = 32.1 bits (71), Expect = 6.4
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 83 NKRCDEEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKAN 142
NK+C++E F K A QQ++ ++ RP ++A + A + D P + +
Sbjct: 471 NKQCNDETEPFCKKRAQQQDHHRRRQRPLDAAGVPEDRRRHVHGAAEEQDGPRRRRRRGG 530
Query: 143 TNPNETQIEPNQKPTR 158
P + Q+P R
Sbjct: 531 AAPPH-PVHDEQQPRR 545
>gi|5880452|gb|AAD54653.1|AF086703_2 (AF086703) LppA [Mycoplasma
capricolum capricolum]
Length = 530
Score = 32.1 bits (71), Expect = 6.4
Identities = 18/65 (27%), Positives = 29/65 (43%), Gaps = 4/65 (6%)
Query: 103 NGKKGG-RPRNSAHHDSQTQTQQKPA---DFDLDNPNETQSKANTNPNETQIEPNQKPTR 158
NGK+ +P N + + +KP D + +PN+ +K N P E + N
Sbjct: 31 NGKQPNEKPANPNEKEPNNEIDKKPIKPEDSNYKDPNKPSNKPNETPKEPEQSGNDSEKD 90
Query: 159 PQTPD 163
P+ PD
Sbjct: 91 PKKPD 95
>gi|6910567|gb|AAF31272.1|AC006424_1 (AC006424) Location of EST
206I21T7, gb|N37185 [Arabidopsis thaliana]
Length = 1068
Score = 31.7 bits (70), Expect = 8.3
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 79 DGWHNKRCDEEIARFHAK------AAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLD 132
+G+ N R D+ + AK QQ++G +GG + + T+T + L
Sbjct: 780 EGYCNLRDDDRCSTRSAKNRRSPDRRTQQDSGSRGGSLCSKGEENETTKTSSYSSRKVLL 839
Query: 133 NPNETQSKANTNPNETQIEPNQKPTRPQTP 162
PN T S ++ + +++ + KP+ +P
Sbjct: 840 PPNSTTSTSSGPCSSSELNEHNKPSPHSSP 869
>gi|6969444|gb|AAF33783.1|AF220424_1 (AF220424) coilin p80 [Rattus
norvegicus]
Length = 441
Score = 31.7 bits (70), Expect = 8.3
Identities = 42/197 (21%), Positives = 81/197 (40%), Gaps = 16/197 (8%)
Query: 71 DEFFLLQDDGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFD 130
D+++ Q+D N++ + + + +N +K A D + +T++K +
Sbjct: 130 DKYWKRQEDSGPNEKASDLETKLFPDEVRRTKNKRKSKVAGIPAEEDEE-ETKKKSSKRK 188
Query: 131 LDNPNETQSKANTNPNETQIEP--NQKPTRPQTPDPIISSSLRSEESLVFAEDGNATGCT 188
+ Q++A+ +P + + +Q + P+ +S RS SL A ++TG
Sbjct: 189 EKCEQKKQTRASKSPKQQTHKEGGSQNCSFPR-------ASYRS--SLAKARRRSSTGAK 239
Query: 189 GKPKRSPHGSRLPDDWAPSEGDVLYATQQGV--DGRYEAEKFRDYWRSVAGAKGRKQDWE 246
G P PD + S+G T QGV + AE +D A A +
Sbjct: 240 GSPSYLSESESCPD--SVSDGHCSVTTMQGVTLSEKLSAELLKDGATKTAAANRQSSKPS 297
Query: 247 ATWRNWIRRAAEDKTSS 263
T+ + +A+ +SS
Sbjct: 298 FTFSSGKGKASRASSSS 314
>gi|729092|sp|Q06850|CDP1_ARATH CALCIUM-DEPENDENT PROTEIN KINASE,
ISOFORM AK1 (CDPK) >gi|477484|pir||A49082
calcium-dependent protein kinase isoform AK1 -
Arabidopsis thaliana >gi|304105 (L14771)
calcium-dependent protein kinase [Arabidopsis thaliana]
Length = 610
Score = 31.7 bits (70), Expect = 8.3
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 117 DSQTQTQQKPA---DFDLDNPNET--QSKANTNPNETQIEPNQKPTRPQTPDPIISSSLR 171
D + +T+ KP + L++ ET ++K+ T P E++ +P KP +P+ + S+ LR
Sbjct: 76 DREIRTESKPETLEEISLESKPETKQETKSETKP-ESKPDPPAKPKKPKHMKRVSSAGLR 134
Query: 172 SEESL 176
+E L
Sbjct: 135 TESVL 139
>gi|2133462|pir||S60123 hypothetical protein R10E11.1 -
Caenorhabditis elegans
Length = 2027
Score = 31.7 bits (70), Expect = 8.3
Identities = 32/154 (20%), Positives = 54/154 (34%), Gaps = 3/154 (1%)
Query: 32 YCLLLDRYYATEQPIPANKAHRIARAYSKKEKSAVDVVLDEFFLLQDDGWHNKRCDEEIA 91
Y LL ++ Y ++ + K R+ + + ++ A+ + L Q G R D
Sbjct: 657 YHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNE---LAQMLGVEGGRSDVHSE 713
Query: 92 RFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIE 151
A Q+N GG P ++ H Q + P+ S N + T
Sbjct: 714 GSSMAVAPSQQNQPWGGAPNSNMHQQIPPNGQVPQVNNSSTFPSSGNSTPNIGASSTVSA 773
Query: 152 PNQKPTRPQTPDPIISSSLRSEESLVFAEDGNAT 185
Q T P S S R ++ F ++T
Sbjct: 774 MLQPKTEPMDDQNTDSLSSRPPTAIGFGGSSSST 807
>gi|6226564|sp|P34545|CBP1_CAEEL CBP-1 PROTEIN
>gi|3979836|emb|CAA82353.1| (Z29095) contains charged
regions and a copy of the bromodomain; cDNA EST
EMBL:D27964 comes from this gene; cDNA EST EMBL:D27963
comes from this gene; cDNA EST EMBL:D27541 comes from
this gene; cDNA EST EMBL:T00307 comes from...
Length = 2056
Score = 31.7 bits (70), Expect = 8.3
Identities = 32/154 (20%), Positives = 54/154 (34%), Gaps = 3/154 (1%)
Query: 32 YCLLLDRYYATEQPIPANKAHRIARAYSKKEKSAVDVVLDEFFLLQDDGWHNKRCDEEIA 91
Y LL ++ Y ++ + K R+ + + ++ A+ + L Q G R D
Sbjct: 657 YHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNE---LAQMLGVEGGRSDVHSE 713
Query: 92 RFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIE 151
A Q+N GG P ++ H Q + P+ S N + T
Sbjct: 714 GSSMAVAPSQQNQPWGGAPNSNMHQQIPPNGQVPQVNNSSTFPSSGNSTPNIGASSTVSA 773
Query: 152 PNQKPTRPQTPDPIISSSLRSEESLVFAEDGNAT 185
Q T P S S R ++ F ++T
Sbjct: 774 MLQPKTEPMDDQNTDSLSSRPPTAIGFGGSSSST 807
>gi|4056437 (AC005990) Strong similarity to PFAM PF|00069 Eukaryotic
protein kinase domain. [Arabidopsis thaliana]
Length = 731
Score = 31.7 bits (70), Expect = 8.3
Identities = 24/98 (24%), Positives = 31/98 (31%), Gaps = 3/98 (3%)
Query: 118 SQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTPDPIIS---SSLRSEE 174
+++ P DL +P + N P + P Q P P DP S S L
Sbjct: 117 NESNDNNPPPSQDLQSPPPSSPSPNVGPTNPESPPLQSPPAPPASDPTNSPPASPLDPTN 176
Query: 175 SLVFAEDGNATGCTGKPKRSPHGSRLPDDWAPSEGDVL 212
G AT P P PS G V+
Sbjct: 177 PPPIQPSGPATSPPANPNAPPSPFPTVPPKTPSSGPVV 214
>gi|4138732|emb|CAA76742.1| (Y17332) proline-rich protein [Zea mays]
Length = 378
Score = 31.7 bits (70), Expect = 8.3
Identities = 22/76 (28%), Positives = 30/76 (38%), Gaps = 2/76 (2%)
Query: 91 ARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPN-ETQSKANTNPNE-T 148
AR H +AAA+ + + + H Q + KP P E Q K N P
Sbjct: 42 ARKHGRAAAEMPQPEPQPKTKPEPHMQPLPQPEPKPKPMPHPEPKPEPQPKPNPEPQPMP 101
Query: 149 QIEPNQKPTRPQTPDP 164
+ +P KP TP P
Sbjct: 102 KPQPKSKPEPLPTPKP 117
>gi|4753723|emb|CAB41947.1| (AJ133778) Six4 protein [Gallus gallus]
Length = 384
Score = 31.7 bits (70), Expect = 8.3
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 79 DGWHNKRCDEEIARFHAKAAAQQENGKKGGRPRNSAHHDSQTQTQ-------QKPADFDL 131
DG C +E +R K +Q RN A + TQ ++ D
Sbjct: 89 DGEETVYCFKEKSRNALKELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRD--- 145
Query: 132 DNPNETQSKANTNPNETQIEPNQKPTRPQTPDPIISSS 169
NP+ETQSK+ ++ N + + + K +P P+ SSS
Sbjct: 146 RNPSETQSKSESDGNPSTEDESSKGQEDLSPHPLSSSS 183
>gi|420411|pir||A45709 major early-transcribed gene ME53 -
Autographa californica nuclear polyhedrosis virus
>gi|293989 (L05914) ME-53 [Autographa californica
nuclear polyhedrosis virus]
Length = 449
Score = 31.7 bits (70), Expect = 8.3
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 126 PADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTPDPIISSSLRSEESLVFAEDG 182
PA +P K+N P T+I P ++PTR P+ SS+ S++ +V +DG
Sbjct: 28 PAANSPPSPVRPPPKSNIKP-PTRISPPKQPTRTSPAKPLEHSSIVSKKPVVNRKDG 83
>gi|6730665|gb|AAF27086.1|AC007945_12 (AC007945) F28C11.15
[Arabidopsis thaliana]
Length = 740
Score = 31.7 bits (70), Expect = 8.3
Identities = 24/98 (24%), Positives = 31/98 (31%), Gaps = 3/98 (3%)
Query: 118 SQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRPQTPDPIIS---SSLRSEE 174
+++ P DL +P + N P + P Q P P DP S S L
Sbjct: 117 NESNDNNPPPSQDLQSPPPSSPSPNVGPTNPESPPLQSPPAPPASDPTNSPPASPLDPTN 176
Query: 175 SLVFAEDGNATGCTGKPKRSPHGSRLPDDWAPSEGDVL 212
G AT P P PS G V+
Sbjct: 177 PPPIQPSGPATSPPANPNAPPSPFPTVPPKTPSSGPVV 214
Database: nr
Posted date: Feb 20, 2000 12:20 AM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.314 0.131 0.402
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94516735
Number of Sequences: 457798
Number of extensions: 4221514
Number of successful extensions: 10611
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 10501
Number of HSP's gapped (non-prelim): 148
length of query: 301
length of database: 140,871,481
effective HSP length: 54
effective length of query: 247
effective length of database: 116,150,389
effective search space: 28689146083
effective search space used: 28689146083
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (21.9 bits)
S2: 70 (31.7 bits)