BLASTP 2.0.10 [Aug-26-1999]
Query= XF-05G02-GL09
(378 letters)
Database: nr
457,798 sequences; 140,871,481 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|2496794|sp|Q55487|Y501_SYNY3 HYPOTHETICAL 36.7 KD PROTEIN SL... 306 2e-82
gi|6652754|gb|AAF22454.1|AF056939_2 (AF056939) bactoprenol gluc... 276 2e-73
gi|2465475 (U82619) orf5 [Shigella flexneri bacteriophage V] 275 4e-73
gi|3123122|sp|P77293|YFDH_ECOLI HYPOTHETICAL 34.6 KD PROTEIN IN... 274 1e-72
gi|2465415 (AF021347) bactoprenol glucosyl transferase [bacteri... 273 2e-72
gi|6453802|gb|AAF09026.1| (AF139596) GtrBI [Shigella flexneri] 271 9e-72
gi|3123141|sp|P74505|YJ43_SYNY3 HYPOTHETICAL 37.6 KD PROTEIN SL... 255 6e-67
gi|3123150|sp|O34319|YKCC_BACSU HYPOTHETICAL 37.4 KD PROTEIN IN... 251 6e-66
gi|3395543|emb|CAA20162| (AL031182) putative sugar transferase ... 250 2e-65
gi|2498262|sp|Q45539|CSBB_BACSU CSBB PROTEIN >gi|2126920|pir||J... 224 8e-58
gi|3123151|sp|O34755|YKOT_BACSU HYPOTHETICAL 38.5 KD PROTEIN IN... 195 6e-49
gi|3123124|sp|P77757|YFBF_ECOLI HYPOTHETICAL 36.3 KD PROTEIN IN... 155 6e-37
gi|2984166 (AE000762) dolichol-phosphate mannosyltransferase [A... 151 1e-35
gi|2921420 (AF036677) PmrF [Salmonella typhimurium] 148 1e-34
gi|2558979 (AF025396) putative dolichol phosphate mannosyltrans... 139 5e-32
gi|1524247|emb|CAB02014| (Z79701) hypothetical protein Rv1500 [... 127 2e-28
gi|1799611|dbj|BAA16081| (D90857) DOLICHOL-PHOSPHATE MANNOSYLTR... 103 2e-21
gi|5726302|gb|AAD48404.1|AF129010_3 (AF129010) CsbB homolog [St... 98 1e-19
gi|4838365|gb|AAD30975.1|AF121895_1 (AF121895) dolichol-phospha... 67 2e-10
gi|6753670|ref|NP_034202.1|| dolichol-phosphate (beta-D) mannos... 67 3e-10
gi|5457998|emb|CAB49488.1| (AJ248284) DOLICHYL-PHOSPHATE MANNOS... 64 2e-09
gi|2258418 (AF007875) dolichol monophosphate mannose synthase [... 63 4e-09
gi|4503363|ref|NP_003850.1|| dolichyl-phosphate mannosyltransfe... 62 6e-09
gi|5457491|emb|CAB48982.1| (AJ248283) DOLICHOL-PHOSPHATE MANNOS... 61 2e-08
gi|2258414 (AF007873) dolichol monophosphate mannose synthase [... 61 2e-08
gi|3256436|dbj|BAA29119.1| (AP000001) 353aa long hypothetical d... 57 3e-07
gi|4150880|emb|CAA10541.1| (AJ131960) dolichol phosphate mannos... 55 8e-07
gi|5104068|dbj|BAA79384.1| (AP000059) 373aa long hypothetical d... 55 1e-06
gi|2337823|emb|CAB11300| (Z98604) hypothetical protein MLCB2052... 55 1e-06
gi|5458583|emb|CAB50071.1| (AJ248286) glycosyl transferase [Pyr... 55 1e-06
gi|3258025|dbj|BAA30708| (AP000006) 215aa long hypothetical pro... 54 2e-06
gi|1653517|dbj|BAA18430| (D90914) dolichyl-phosphate-mannose sy... 53 3e-06
gi|2621438 (AE000823) dolichyl-phosphate mannose synthase relat... 53 4e-06
gi|2896788|emb|CAA17265| (AL021899) hypothetical protein Rv2051... 52 7e-06
gi|4226150 (AF125462) similar to glycosyl transferases (Pfam:PF... 52 9e-06
gi|6325441|ref|NP_015509.1|DPM1| dolichol phosphate mannose syn... 52 1e-05
gi|6911992|emb|CAB72208.1| (AL138851) putative bi-functional tr... 52 1e-05
gi|4106593|emb|CAA21348| (AL031866) ORF25, len: 457 aa, hmsR, 9... 51 2e-05
gi|1185391|gb|AAB66590| (U22837) HmsR [Yersinia pestis] 51 2e-05
gi|2258416 (AF007874) dolichol monophosphate mannose synthase [... 50 5e-05
gi|3256833|dbj|BAA29516| (AP000002) 334aa long hypothetical pro... 49 6e-05
gi|6468712|emb|CAB61668.1| (AL133213) putative glycosyl transfe... 49 8e-05
gi|3256836|dbj|BAA29519| (AP000002) 304aa long hypothetical pro... 48 1e-04
gi|6598395|gb|AAF18606.1|AC003674_1 (AC003674) putative dolichy... 48 2e-04
gi|2650038 (AE001064) dolichol-P-glucose synthetase, putative [... 47 2e-04
gi|4262643|gb|AAD14758| (AF125965) similar to glycosyl transfer... 46 4e-04
gi|5281121|gb|AAD41465.1|AF102850_1 (AF102850) dolichyl-phospha... 46 4e-04
gi|2621435 (AE000823) dolichyl-phosphate mannose synthase relat... 46 5e-04
gi|5042285|emb|CAB44539.1| (AL078618) putative bi-functional tr... 46 5e-04
gi|1706499|sp|P54856|DPM1_USTMA DOLICHOL-PHOSPHATE MANNOSYLTRAN... 45 0.001
gi|4205912 (AF063450) nodulation protein C [Rhizobium sp. Sh19351] 43 0.004
gi|4205915 (AF063451) nodulation protein C [Rhizobium sp. N95] 43 0.004
gi|2271519 (AF009829) unknown [Mycobacterium bovis] 43 0.004
gi|2495587|sp|P75905|YCDQ_ECOLI HYPOTHETICAL 50.8 KD PROTEIN IN... 43 0.006
gi|5458999|emb|CAB50485.1| (AJ248288) HYALURONAN SYNTHASE RELAT... 43 0.006
gi|128446|sp|P04341|NODC_RHIME N-ACETYLGLUCOSAMINYLTRANSFERASE ... 42 0.008
gi|2621176 (AE000802) dolichyl-phosphate mannose synthase [Meth... 42 0.008
gi|4205942 (AF063460) nodulation protein C [Rhizobium sp. USDA ... 42 0.008
gi|4205954 (AF063464) nodulation protein C [Rhizobium sp. USDA ... 42 0.008
gi|4205927 (AF063455) nodulation protein C [Rhizobium sp. CC2129] 42 0.010
gi|4205930 (AF063456) nodulation protein C [Rhizobium sp. CC2155] 42 0.010
gi|4205933 (AF063457) nodulation protein C [Rhizobium sp. CC2160] 42 0.010
gi|5813901|gb|AAD52055.1|AF086783_3 (AF086783) IcaA [Staphyloco... 41 0.013
gi|462036|sp|P33697|EXOO_RHIME SUCCINOGLYCAN BIOSYNTHESIS PROTE... 41 0.013
gi|541006|pir||S39958 exoO protein - Rhizobium meliloti (strain... 41 0.013
gi|2133379|pir||S70643 dolichyl-phosphate-mannose synthase prec... 41 0.013
gi|46292|emb|CAA25811| (X01649) open reading frame (pot. nodC g... 41 0.017
gi|72761|pir||ZZZRC4 nodulation protein nodC - Rhizobium melilo... 41 0.017
gi|3123077|sp|Q57022|Y868_HAEIN PUTATIVE GLYCOSYL TRANSFERASE H... 41 0.017
gi|2496031|sp|Q57964|Y544_METJA HYPOTHETICAL PROTEIN MJ0544 >gi... 41 0.017
gi|2599110 (AF028810) PssH [Rhizobium leguminosarum bv. viciae] 41 0.017
gi|2760917 (AF038577) NodC [Sinorhizobium meliloti] 41 0.017
gi|3061293|dbj|BAA25647| (D86202) dolichol-phosphate-mannose sy... 41 0.017
gi|3256859|dbj|BAA29542| (AP000002) 314aa long hypothetical pro... 41 0.017
gi|4205936 (AF063458) nodulation protein C [Rhizobium sp. WSM870] 41 0.017
gi|4205948 (AF063462) nodulation protein C [Rhizobium sp. USDA ... 41 0.017
gi|4205951 (AF063463) nodulation protein C [Rhizobium sp. USDA ... 41 0.017
gi|4205957 (AF063465) nodulation protein C [Rhizobium sp. USDA ... 41 0.017
gi|262672|bbs|121657 NodC=polysaccharide polymerizing enzyme ho... 40 0.030
gi|4205918 (AF063452) nodulation protein C [Rhizobium sp. USDA ... 40 0.030
gi|4206044 (AF063494) nodulation protein C [Rhizobium sp. CIAM1... 40 0.030
gi|2444448 (AF020678) N-acetylglucosaminyltransferase [Bradyrhi... 40 0.039
gi|3108339 (AF061245) glucosyl transferase ExoO [Sinorhizobium ... 40 0.039
gi|6325029|ref|NP_015097.1|ALG5| UDP-glucose:dolichyl-phosphate... 39 0.051
gi|3435171 (AF061251) putative glycosyl transferase WbdN [Esche... 39 0.051
gi|4867915|dbj|BAA77724.1| (AB008676) glycosyl transferase [Esc... 39 0.051
gi|1054574|dbj|BAA12837| (D85613) 44.8KD hypothetical protein [... 39 0.067
gi|4205969 (AF063469) nodulation protein C [Rhizobium sp. CIAM1... 39 0.067
gi|4205972 (AF063470) nodulation protein C [Rhizobium sp. CIAM490] 39 0.067
gi|4206050 (AF063496) nodulation protein C [Rhizobium sp. USDA ... 39 0.067
gi|2621387 (AE000818) mannosyltransferase [Methanobacterium the... 39 0.087
gi|4205963 (AF063467) nodulation protein C [Rhizobium sp. CIAM1... 39 0.087
gi|6458811|gb|AAF10652.1|AE001958_6 (AE001958) rfbJ protein/con... 39 0.087
gi|6460566|gb|AAF12272.1|AE001862_98 (AE001862) glycosyltransfe... 39 0.087
gi|1709318|sp|P50356|NODC_RHIGA N-ACETYLGLUCOSAMINYLTRANSFERASE... 38 0.11
gi|1709319|sp|P04678|NODC_RHILT N-ACETYLGLUCOSAMINYLTRANSFERASE... 38 0.11
gi|2105063|emb|CAB08827| (Z95436) hypothetical protein Rv3631 [... 38 0.11
gi|2865458 (AF039956) glycosyl transferase [Sinorhizobium fredii] 38 0.11
gi|4205924 (AF063454) nodulation protein C [Rhizobium sp. USDA ... 38 0.11
gi|4205975 (AF063471) nodulation protein C [Rhizobium sp. CIAM540] 38 0.11
gi|420905|pir||S34305 nodulation protein nodC - Rhizobium sp >g... 38 0.15
gi|1652021|dbj|BAA16947| (D90901) hypothetical protein [Synecho... 38 0.15
gi|2495523|sp|Q47536|YAIP_ECOLI HYPOTHETICAL 44.7 KD PROTEIN IN... 38 0.15
gi|2507081|sp|P50357|NODC_RHISN N-ACETYLGLUCOSAMINYLTRANSFERASE... 38 0.15
gi|4205921 (AF063453) nodulation protein C [Rhizobium sp. USDA ... 38 0.15
gi|4205960 (AF063466) nodulation protein C [Rhizobium sp. USDA ... 38 0.15
gi|1709317|sp|P53417|NODC_BRAEL N-ACETYLGLUCOSAMINYLTRANSFERASE... 38 0.20
gi|3413448|emb|CAA72353| (Y11648) wlaD [Campylobacter jejuni] 38 0.20
gi|6968562|emb|CAB73383.1| (AL139077) putative glycosyltransfer... 38 0.20
gi|128442|sp|P17862|NODC_RHILO N-ACETYLGLUCOSAMINYLTRANSFERASE ... 37 0.26
gi|4205981 (AF063473) nodulation protein C [Rhizobium sp. USDA ... 37 0.26
gi|5457504|emb|CAB48995.1| (AJ248283) hypothetical protein [Pyr... 37 0.26
gi|1653137|dbj|BAA18053| (D90911) spore coat polysaccharide bio... 37 0.34
gi|1944170|dbj|BAA19644| (AB002668) unnamed protein product [Ac... 37 0.34
gi|2114001|emb|CAB08973| (Z95558) hypothetical protein Rv0539 [... 37 0.34
gi|3127811|emb|CAA04330| (AJ000854) glycosyltransferase [Campyl... 37 0.34
gi|6458965|gb|AAF10794.1|AE001970_9 (AE001970) glycosyl transfe... 37 0.34
gi|3043923 (AF036004) hyaluronan synthase [Pasteurella multocida] 36 0.44
gi|3435187 (AF067175) glycosyl transferase [Pasteurella multocida] 36 0.44
gi|1161380 (U43366) IcaA [Staphylococcus epidermidis] 36 0.58
gi|2496163|sp|Q58619|YC22_METJA HYPOTHETICAL PROTEIN MJ1222 >gi... 36 0.58
gi|3116140|emb|CAA18889.1| (AL023288) dolichyl-phosphate beta-g... 36 0.58
gi|4206032 (AF063490) nodulation protein C [Rhizobium sp. 2M164] 36 0.58
gi|140760|sp|P22639|YHET_ANASP HYPOTHETICAL PROTEIN IN HETA 3'R... 36 0.76
gi|3986517 (AF093220) glucosyltransferase [Mesorhizobium huakuii] 36 0.76
gi|4206038 (AF063492) nodulation protein C [Rhizobium sp. USDA ... 36 0.76
gi|6940839|gb|AAF31776.1|AF130984_12 (AF130984) putative glycos... 36 0.76
gi|1073728|pir||S51262 trsC protein - Yersinia enterocolitica >... 35 0.99
gi|2145552|pir||S70738 trsC protein - Yersinia enterocolitica (... 35 0.99
gi|4514312|dbj|BAA75360.1| (AB013364) TuaG [Bacillus halodurans] 35 0.99
gi|2454562|gb|AAB94868| (AF015609) unknown [Bacillus subtilis] ... 35 1.3
gi|3256788|dbj|BAA29471| (AP000002) 321aa long hypothetical pro... 35 1.3
gi|4206041 (AF063493) nodulation protein C [Rhizobium sp. USDA ... 35 1.3
gi|5458615|emb|CAB50103.1| (AJ248286) glycosyltransferase [Pyro... 35 1.3
gi|5616250|gb|AAD45693.1|AF158628_3 (AF158628) hypothetical pro... 35 1.3
gi|5459086|emb|CAB50572.1| (AJ248288) hypothetical protein [Pyr... 34 2.2
gi|5739463|gb|AAD50485.1|AF172324_3 (AF172324) WbnA [Escherichi... 34 2.2
gi|1405809|emb|CAA67139| (X98514) nodC [Rhizobium tropici] 34 2.9
gi|4580633|gb|AAD24456.1|AF118389_13 (AF118389) Cps2J [Streptoc... 34 2.9
gi|6968580|emb|CAB73401.1| (AL139077) putative glucosyltransfer... 34 2.9
gi|1653339|dbj|BAA18254| (D90912) hypothetical protein [Synecho... 33 3.8
gi|6941975|emb|CAB72409.1| (AL138978) putative AfsR-like regula... 33 3.8
gi|5701991|emb|CAB52224.1| (Z98171) EpsV protein [Streptococcus... 33 5.0
gi|1857121|gb|AAB48386.1| (U65788) glycosyl transferase [Neisse... 32 6.6
gi|3257163|dbj|BAA29846| (AP000003) 279aa long hypothetical sug... 32 6.6
gi|2921555|gb|AAC04822.1| (AF039306) UDP-hexose transferase [Br... 32 8.6
>gi|2496794|sp|Q55487|Y501_SYNY3 HYPOTHETICAL 36.7 KD PROTEIN
SLL0501 >gi|1001347|dbj|BAA10834| (D64006) hypothetical
protein [Synechocystis sp.]
Length = 318
Score = 306 bits (776), Expect = 2e-82
Identities = 150/306 (49%), Positives = 211/306 (68%), Gaps = 1/306 (0%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
L++V+P YNE L L R++ L L ++ ++ V+DGS D+T + ++ ++
Sbjct: 5 LSIVIPMYNEEDNLEHLFARLLEVLTPL-KITYEIICVNDGSKDKTLKQLIDCYQSNRQI 63
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
+ LSRNFGKEIA++AG+D AV+ +DAD QDPPELI + V +WR GYD VY TR
Sbjct: 64 KIVNLSRNFGKEIALSAGIDYAQGNAVIPIDADLQDPPELIHELVDKWREGYDIVYATRR 123
Query: 167 ERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF 226
RQGE VK+F A FY++IGR++ IP +TGDFRL+ + + A++Q+ ER RFMKGLF
Sbjct: 124 SRQGETWVKQFTAKMFYKVIGRMTEIKIPPNTGDFRLMDRKVVNAIKQLPERTRFMKGLF 183
Query: 227 GWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF 286
WVG+RQ + + REPR G +K+ +W+LWNFAL+GI SFS PL+V TYLG I ++ +
Sbjct: 184 AWVGYRQTFVLFDREPRFQGQTKWNYWKLWNFALDGIFSFSLLPLKVWTYLGSIISLLSL 243
Query: 287 GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI 346
Y +++LK + LG VPG+ ++M IL LGGVQLI+LG+IGEYLGR+Y+E K RPLY +
Sbjct: 244 AYASFLILKTITLGVDVPGYASLMVAILFLGGVQLISLGVIGEYLGRVYEEVKARPLYLV 303
Query: 347 DTAAGI 352
G+
Sbjct: 304 SDLWGL 309
>gi|6652754|gb|AAF22454.1|AF056939_2 (AF056939) bactoprenol glucose
transferase [bacteriophage SfX]
Length = 305
Score = 276 bits (699), Expect = 2e-73
Identities = 134/300 (44%), Positives = 199/300 (65%), Gaps = 1/300 (0%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+++VVP +NE + +P+ + + V L + +++++DGS D T II AL V+DP V
Sbjct: 3 ISLVVPVFNEEEAIPIFY-KTVREFEELKPYEVEIVFINDGSKDATESIINALAVSDPLV 61
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
+ +RNFGKE A+ AGLD+T AV+ +D D QDP E+IP+ + +W+AG D V R
Sbjct: 62 VPLSFTRNFGKEPALFAGLDHTTGDAVIPIDVDLQDPIEVIPRLIEKWQAGADMVLAKRS 121
Query: 167 ERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF 226
+R +G +KR A FY++ ++S I + GDFRL+S ++ ++ + ER+ FMKG+
Sbjct: 122 DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL 181
Query: 227 GWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF 286
WVG + + Y R R++G SKF W+LWN ALEGITSFST PLRV TY+GL A +F
Sbjct: 182 SWVGGQTDVVEYVRTERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF 241
Query: 287 GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI 346
YG W+++ ++ G+ V G+P+M+ IL LGGVQLI +G++GEY+GR+Y E+K RP Y I
Sbjct: 242 LYGAWMIIDTIVFGNPVRGYPSMLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPRYLI 301
>gi|2465475 (U82619) orf5 [Shigella flexneri bacteriophage V]
Length = 307
Score = 275 bits (696), Expect = 4e-73
Identities = 134/300 (44%), Positives = 197/300 (65%), Gaps = 1/300 (0%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+++VVP +NE + +P+ + + V L + +++++DGS D T II AL V+DP V
Sbjct: 3 ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV 61
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
+ +RNFGKE A+ AGLD+ AV+ +D D QDP E+IP + +W+AG D V R
Sbjct: 62 VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRS 121
Query: 167 ERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF 226
+R +G +KR A FY++ ++S I + GDFRL+S ++ ++ + ER+ FMKG+
Sbjct: 122 DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL 181
Query: 227 GWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF 286
WVG + + Y R R++G SKF W+LWN ALEGITSFST PLRV TY+GL A +F
Sbjct: 182 SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF 241
Query: 287 GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI 346
YG W+++ L+ G+ V G+P+++ IL LGGVQLI +G++GEY+GR+Y ESK RP Y I
Sbjct: 242 LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYIESKHRPKYII 301
>gi|3123122|sp|P77293|YFDH_ECOLI HYPOTHETICAL 34.6 KD PROTEIN IN
INTC-DSDC INTERGENIC REGION >gi|1788692 (AE000323)
putative glycan biosynthesis enzyme [Escherichia coli]
>gi|1799748|dbj|BAA16210| (D90865) DOLICHOL-PHOSPHATE
MANNOSYLTRANSFERASE (EC 2.4.1.83) (DOLICHOL- PHOSPHATE
MANNOSE SYNTHASE) (DOLICHYL-PHOSPHATE BETA-D-
MANNOSYLTRANSFERASE). [Escherichia coli]
>gi|1799756|dbj|BAA16217| (D90866) DOLICHOL-PHOSPHATE
MANNOSYLTRANSFERASE (EC 2.4.1.83) (DOLICHOL- PHOSPHATE
MANNOSE SYNTHASE) (DOLICHYL-PHOSPHATE BETA-D-
MANNOSYLTRANSFERASE). [Escherichia coli]
Length = 306
Score = 274 bits (693), Expect = 1e-72
Identities = 130/300 (43%), Positives = 198/300 (65%), Gaps = 1/300 (0%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+++VVP +NE + +P+ + + V L + +++++DGS D T II AL V+DP V
Sbjct: 3 ISLVVPVFNEEEAIPIFY-KTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPLV 61
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
+ +RNFGKE A+ AGLD+ A++ +D D QDP E+IP + +W+AG D V R
Sbjct: 62 VPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRS 121
Query: 167 ERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF 226
+R +G +KR A FY++ ++S I + GDFRL+S ++ ++ + ER+ FMKG+
Sbjct: 122 DRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGIL 181
Query: 227 GWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF 286
WVG + + Y R R++G +KF W+LWN ALEGITSFST PLR+ TY+GL+ A AF
Sbjct: 182 SWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVAF 241
Query: 287 GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI 346
YG W++L +I G+ V G+P+++ IL LGG+Q+I +G++GEY+GR Y E+K+RP Y I
Sbjct: 242 IYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYII 301
>gi|2465415 (AF021347) bactoprenol glucosyl transferase
[bacteriophage SfII]
Length = 309
Score = 273 bits (690), Expect = 2e-72
Identities = 133/300 (44%), Positives = 196/300 (65%), Gaps = 1/300 (0%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+++VVP +NE + +P+ + + V L + +++++DGS D T II AL V+DP V
Sbjct: 3 ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV 61
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
+ +RNFGKE A+ AGLD+ AV+ +D D QDP E+IP + +W+AG D V R
Sbjct: 62 VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRS 121
Query: 167 ERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF 226
+R +G +KR A FY++ ++S I + GDFRL+S ++ ++ + ER+ FMKG+
Sbjct: 122 DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL 181
Query: 227 GWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF 286
WVG + + Y R R++G SKF W+LWN ALEGITSFST PLRV TY+GL A +F
Sbjct: 182 SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF 241
Query: 287 GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI 346
YG W+++ L+ G+ V G+P+++ IL LGGVQLI +G++GEY+GR+Y E K RP Y I
Sbjct: 242 LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYIEVKNRPKYII 301
>gi|6453802|gb|AAF09026.1| (AF139596) GtrBI [Shigella flexneri]
Length = 306
Score = 271 bits (685), Expect = 9e-72
Identities = 131/300 (43%), Positives = 197/300 (65%), Gaps = 1/300 (0%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+++VVP +NE + +P+ + + V L + +++++DGS D T II AL V+DP V
Sbjct: 3 ISLVVPVFNEEEAIPVFY-KTVREFQELKPYEVEIVFINDGSKDATESIINALAVSDPLV 61
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
+ +RNFGKE A+ AGLD+ AV+ +D D QDP E+IP + +W+AG + V R
Sbjct: 62 VPLSFTRNFGKEPALFAGLDHASGDAVIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKRS 121
Query: 167 ERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF 226
+R +G +KR A FY++ ++S I + GDFRL+S ++ ++ + ER+ FMKG+
Sbjct: 122 DRSTDGRLKRKTAEWFYKLHNKISTPKIEENVGDFRLMSREVVENIKLLPERNLFMKGIL 181
Query: 227 GWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF 286
WVG + + Y R R++G SKF W+LWN ALEGITSFST PLRV TY+GL A +F
Sbjct: 182 SWVGGQTDVVEYVRAERVAGISKFNGWKLWNLALEGITSFSTFPLRVWTYIGLFVASISF 241
Query: 287 GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI 346
YG W+++ L+ G+ V G+P+++ IL LGGVQLI +G++GEY+GR+Y E+K RP Y +
Sbjct: 242 LYGAWMIIDTLVFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYLETKSRPKYIL 301
>gi|3123141|sp|P74505|YJ43_SYNY3 HYPOTHETICAL 37.6 KD PROTEIN
SLR1943 >gi|1653697|dbj|BAA18609| (D90915) dolichol
phosphate mannose synthase [Synechocystis sp.]
Length = 331
Score = 255 bits (644), Expect = 6e-67
Identities = 134/333 (40%), Positives = 203/333 (60%), Gaps = 6/333 (1%)
Query: 23 ISPSPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLL 82
++ SP+ +D V D +++VP YNE +P+L+ R+ A ++ L + L+
Sbjct: 2 VTNSPSRSD---ISVYNGDRQGPMYSLIVPIYNEEDNIPVLYERLKAVMDQLASTE--LV 56
Query: 83 YVDDGSNDRTWDIIEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQD 142
++DGS DR+ ++I AL D RV + +RNFG ++A+TAGL+ AV++LDAD QD
Sbjct: 57 LINDGSGDRSLEMIRALHDQDKRVCYLSFARNFGHQVAVTAGLNFARGQAVIILDADLQD 116
Query: 143 PPELIPQFVARWRAGYDNVYGTRLERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFR 202
PPEL+PQ V RW+AGY VY R++R+ E KR A FYR++ RL+ IP DTGDF
Sbjct: 117 PPELVPQLVERWQAGYSVVYAQRVKRRQESWFKRLTAYGFYRLLQRLADVRIPADTGDFC 176
Query: 203 LLSPRALQALRQIRERHRFMKGLFGWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEG 262
L+ + + L + ER+R+++GL WVGF Q + + R+PR +G K+TF + A+
Sbjct: 177 LMDRQVVDLLNTMPERNRYIRGLRAWVGFPQTGVKFERDPRHAGEVKYTFRKSLRLAINS 236
Query: 263 ITSFSTAPLRVTTYLGLITAVFAFGYGVWIVLKALI-LGDRVPGWPTMMTVILLLGGVQL 321
+ SFS PLR+ TYLGL+ A+ A + ++ L + G+ T++ L G VQL
Sbjct: 237 LVSFSIVPLRLATYLGLLAALLAIAMMILVLYWRLSETNSPLDGFATVVIANLFFGAVQL 296
Query: 322 IALGLIGEYLGRLYDESKRRPLYFIDTAAGIAE 354
I +G++GEY+GR+YDE K RPLY + AG +
Sbjct: 297 ICIGILGEYIGRIYDEVKGRPLYTLAEMAGFEQ 329
>gi|3123150|sp|O34319|YKCC_BACSU HYPOTHETICAL 37.4 KD PROTEIN IN
SPOIISA-HTRA INTERGENIC REGION >gi|2632010|emb|CAA05569|
(AJ002571) YkcC [Bacillus subtilis]
>gi|2633643|emb|CAB13146| (Z99110) similar to dolichol
phosphate mannose synthase [Bacillus subtilis]
Length = 323
Score = 251 bits (635), Expect = 6e-66
Identities = 121/309 (39%), Positives = 197/309 (63%), Gaps = 1/309 (0%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRVG 107
++VVP YNE + + R+ ++ E + LL+V+DGS DR+ +I+ + DPRV
Sbjct: 8 SIVVPVYNEELVIHETYQRLKEVMDQTKE-NYELLFVNDGSKDRSIEILREHSLIDPRVK 66
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRLE 167
I SRNFG +IAITAG+D A++++DAD QDPPELI + + +W+ GY+ VY R +
Sbjct: 67 IIDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQDPPELILEMIEKWKEGYEVVYAVRTK 126
Query: 168 RQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLFG 227
R+GE K+ AA FYR++ ++ IP DTGDFRL+ + +++++E++ F++GL
Sbjct: 127 RKGETFFKKQTAAMFYRLLSGMTDIDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVS 186
Query: 228 WVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAFG 287
WVG +Q A+ Y R+ RL+G +K+ ++ +++GIT+FS PL++ +Y G++ + F
Sbjct: 187 WVGSKQTAVEYVRDERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGTGFL 246
Query: 288 YGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFID 347
Y ++ L + GW +++ + LL G+ L+ LG+IGEY+GR+YDE+K RPLY +
Sbjct: 247 YMFIVLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDRPLYIVQ 306
Query: 348 TAAGIAECR 356
+ GI R
Sbjct: 307 KSYGIENKR 315
>gi|3395543|emb|CAA20162| (AL031182) putative sugar transferase
[Streptomyces coelicolor]
Length = 478
Score = 250 bits (631), Expect = 2e-65
Identities = 131/300 (43%), Positives = 181/300 (59%), Gaps = 2/300 (0%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
L+VVVP +NEA + H + L LD + YVDDGS DRT D+I L DPRV
Sbjct: 6 LSVVVPCFNEAAVIERFHSAVENVLGP-SNLDYEICYVDDGSTDRTPDLIRQLGFADPRV 64
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
+ LSRNFGKE A+ AGL + AV+L+DAD Q PPELIP+ + GYD V R
Sbjct: 65 RYVVLSRNFGKESAMLAGLRMSRGQAVVLMDADLQHPPELIPRMLELHARGYDQVVPRR- 123
Query: 167 ERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF 226
+R G+G+V+ L+ +Y ++ L + GDFRLLS A+ + + E +RF KG+F
Sbjct: 124 DRAGDGVVRTLLSRGYYALVRHLMDVKVLDGAGDFRLLSRHAVDTVLSLPETNRFSKGIF 183
Query: 227 GWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAF 286
W+GF YR RL+G SK+ RL N+ ++G+ SF+ PLR+ Y G + A
Sbjct: 184 SWIGFSTATFTYRNAQRLAGSSKWGSRRLLNYGIDGLLSFNNRPLRLAIYTGFWCLLVAV 243
Query: 287 GYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI 346
Y W+V+ + G VPG+ T++ V++ LGGVQLI LG+IGEY+GR+Y E KRRP + +
Sbjct: 244 VYATWVVIDVAVHGTAVPGYATLLMVVVALGGVQLITLGVIGEYVGRIYHEVKRRPPFVV 303
>gi|2498262|sp|Q45539|CSBB_BACSU CSBB PROTEIN
>gi|2126920|pir||JC5173 csbB protein - Bacillus subtilis
>gi|1387979 (L77099) 44% identity over 302 residues with
hypothetical protein from Synechocystis sp, accession
D64006_CD; expression induced by environmental stress;
some similarity to glycosyl transferases; two potential
membrane-spanning helices [Baci...
>gi|2633183|emb|CAB12688| (Z99108) stress response
protein [Bacillus subtilis] >gi|2804544|dbj|BAA24480|
(D85082) YfhN [Bacillus subtilis]
Length = 329
Score = 224 bits (566), Expect = 8e-58
Identities = 117/308 (37%), Positives = 185/308 (59%), Gaps = 2/308 (0%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV 101
M + +++++P+YNE + L+H + + D + +++DGS D T I+ L
Sbjct: 1 MKQGLISIIIPSYNEGYNVKLIHESLKKEFKNI-HYDYEIFFINDGSVDDTLQQIKDLAA 59
Query: 102 NDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNV 161
RV I SRNFGKE AI AG ++ AV+++DAD Q P L+ +F+ + GYD V
Sbjct: 60 TCSRVKYISFSRNFGKEAAILAGFEHVQGEAVIVMDADLQHPTYLLKEFIKGYEEGYDQV 119
Query: 162 YGTRLERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRF 221
R R+G+ V+ L++ +Y+ I + + GDFRLLS +A+ AL ++ E +RF
Sbjct: 120 IAQR-NRKGDSFVRSLLSSMYYKFINKAVEVDLRDGVGDFRLLSRQAVNALLKLSEGNRF 178
Query: 222 MKGLFGWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLIT 281
KGLF W+GF Q + Y R +G SK++F L+N+ ++G+ SF+ PLR+ Y G+
Sbjct: 179 SKGLFCWIGFDQKIVFYENVERKNGTSKWSFSSLFNYGMDGVVSFNHKPLRLCFYTGIFI 238
Query: 282 AVFAFGYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRR 341
+ + Y + +K L G VPG+ T+++ +L LGGVQL++LG+IGEY+GR+Y E+K+R
Sbjct: 239 LLLSIIYIIATFVKILTNGISVPGYFTIISAVLFLGGVQLLSLGIIGEYIGRIYYETKKR 298
Query: 342 PLYFIDTA 349
P Y I A
Sbjct: 299 PHYLIKEA 306
>gi|3123151|sp|O34755|YKOT_BACSU HYPOTHETICAL 38.5 KD PROTEIN IN
TNRA-SSPD INTERGENIC REGION >gi|2633693|emb|CAB13196|
(Z99110) similar to dolichol phosphate mannose synthase
[Bacillus subtilis] >gi|2633710|emb|CAB13212| (Z99111)
similar to dolichol phosphate mannose synthase [Bacillus
subtilis]
Length = 337
Score = 195 bits (490), Expect = 6e-49
Identities = 110/308 (35%), Positives = 176/308 (56%), Gaps = 9/308 (2%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPEL-----DGRLLYVDDGSNDRTWDIIEALVV 101
LT+VVP +NE + ++ ++ L E D ++L+VDDGS DRTW +I +
Sbjct: 8 LTIVVPCFNEEEVFQETSHQLTEVVDDLIEEKLIAEDSKILFVDDGSKDRTWALIAMESI 67
Query: 102 NDPRVGGIKLSRNFGKEIAITAGLDNTP--FGAVLLLDADGQDPPELIPQFVARWRAGYD 159
+ +V G+KL+ N G + A+ AGL V+ +DAD QD +I F+ ++ G +
Sbjct: 68 RNKKVTGLKLACNVGHQKALLAGLHKAKNRSDCVISIDADLQDDISVIRDFMLKYHEGCE 127
Query: 160 NVYGTRLERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERH 219
VYG R R+ + KR A FYR++ +L I + DFRL++ R+L+ L + E +
Sbjct: 128 IVYGVRRSRKTDTFFKRTTALGFYRLMNKLGIKLI-YNHADFRLMNKRSLEELERYPEAN 186
Query: 220 RFMKGLFGWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGL 279
F++G+ +GF+ + Y R+ R +G +K+ ++ +FA GITSFS AP+R T LG
Sbjct: 187 LFLRGIVPMIGFKSAEVLYDRKERFAGKTKYPLKKMLSFAFNGITSFSVAPIRFFTLLGF 246
Query: 280 ITAVFAFGYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESK 339
+ + G+ ++ L LG GW +++ I LGG+QL+ +G+IGEY+G ++ E K
Sbjct: 247 VLFFLSAVAGIGAFIQKL-LGHTNAGWASLIISIWFLGGLQLMGIGIIGEYIGTIFSEVK 305
Query: 340 RRPLYFID 347
RRP Y ID
Sbjct: 306 RRPKYAID 313
>gi|3123124|sp|P77757|YFBF_ECOLI HYPOTHETICAL 36.3 KD PROTEIN IN
AIS-PMRD INTERGENIC REGION >gi|1788588 (AE000315)
putative sugar transferase [Escherichia coli]
>gi|1799606|dbj|BAA16077.1| (D90856) DOLICHOL-PHOSPHATE
MANNOSYLTRANSFERASE (EC 2.4.1.83) (DOLICHOL- PHOSPHATE
MANNOSE SYNTHASE) (DOLICHYL-PHOSPHATE BETA-D-
MANNOSYLTRANSFERASE). [Escherichia coli]
Length = 322
Score = 155 bits (388), Expect = 6e-37
Identities = 104/310 (33%), Positives = 155/310 (49%), Gaps = 19/310 (6%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWD-IIEALVVNDPR 105
++VV+P YNE ++LP L R A +L + + +L +DDGS+D + ++EA +
Sbjct: 10 VSVVIPVYNEQESLPELIRRTTTACESLGK-EYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTR 165
+ I L+RN+G+ AI AG + ++ LDAD Q+PPE IP+ VA+ GYD V R
Sbjct: 69 IVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVR 128
Query: 166 LERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDF----RLLSPRALQALRQIRERHRF 221
RQ K + +MI RL GD+ R + A+ ER F
Sbjct: 129 QNRQDSWFRK-----TASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHERSTF 183
Query: 222 MKGLFGWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLIT 281
+ L R I +P R G SK++F RL N + +T +T PLR+ + LG I
Sbjct: 184 IPILANIFARRAIEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLGSII 243
Query: 282 AVFAFGYGVWIVLKALILGDRVPGWPT-----MMTVILLLGGVQLIALGLIGEYLGRLYD 336
A+ F V +V+ L G P W + V+ G Q I +GL+GEY+GR+Y
Sbjct: 244 AIGGFSIAVLLVILRLTFG---PQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYT 300
Query: 337 ESKRRPLYFI 346
+ + RP YF+
Sbjct: 301 DVRARPRYFV 310
>gi|2984166 (AE000762) dolichol-phosphate mannosyltransferase
[Aquifex aeolicus]
Length = 322
Score = 151 bits (377), Expect = 1e-35
Identities = 93/307 (30%), Positives = 163/307 (52%), Gaps = 7/307 (2%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
++VV+PAYNE + +P+L+ ++ L++L E D +++VDDGS DRT +I++ + D +V
Sbjct: 2 ISVVIPAYNEEENIPVLYEKLKKVLDSLGE-DYEIIFVDDGSTDRTPEILKEIANKDKKV 60
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
I+ RN+G+ AI AG ++ ++ +DAD Q+ PE IP+ + + + GYD V G R
Sbjct: 61 KVIRFRRNYGQTAAIYAGFEHAKGDVIITMDADLQNDPEDIPKLLEKMKEGYDIVSGWRK 120
Query: 167 ERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGLF 226
+R+ L ++ + +I +++ + + + R + HRF+ L
Sbjct: 121 DRKDPFLSRKLPSKIANWIISKVTGVELHDYGCTLKAYKADIAKMYRLYGDMHRFLPALA 180
Query: 227 GWVGFRQIALPYRREPRLSGGSKFTFWR-----LWNFALEGITSFSTAPLRVTTYLGLIT 281
G + +P R PRL G SK+ R L F ++ + + T PL V +G I
Sbjct: 181 KRFGAKITEIPVRHHPRLYGRSKYGIDRTIRVILDIFLVKFLNEYITRPLYVFGGIGFIL 240
Query: 282 AVFAFGYGVWIVLKALILGDRVPGWPTM-MTVILLLGGVQLIALGLIGEYLGRLYDESKR 340
F G+++ + L G+ + P + + V+L+L G+QLI+ G+I E + R Y ES+
Sbjct: 241 FTLGFLIGLYLTVLKLFFGENIGNRPLLILGVLLILSGIQLISTGIIAELIVRTYYESRG 300
Query: 341 RPLYFID 347
Y I+
Sbjct: 301 EKPYIIE 307
>gi|2921420 (AF036677) PmrF [Salmonella typhimurium]
Length = 327
Score = 148 bits (369), Expect = 1e-34
Identities = 95/306 (31%), Positives = 157/306 (51%), Gaps = 11/306 (3%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPR 105
++VV+P YNE ++LP L R A +L + +L +DDGS+D + ++ ++A D
Sbjct: 10 VSVVIPVYNEQESLPELIRRTTTACESLGKA-WEILLIDDGSSDSSAELMVKASQEADSH 68
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTR 165
+ I L+RN+G+ AI AG + ++ LDAD Q+PPE IP+ VA+ G+D V GT
Sbjct: 69 IISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGFD-VVGTV 127
Query: 166 LERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKGL 225
+ + + L ++ + +I R + + R + + + ER F+ L
Sbjct: 128 RQNRQDSLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPIIDTMLRCHERSTFIPIL 187
Query: 226 FGWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFA 285
R +P R G SK++F RL N + +T +T PLR+ + LG + A+
Sbjct: 188 ANIFARRATEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSLLGSVIAIGG 247
Query: 286 FGYGVWIVLKALILGDRVPGWPT-----MMTVILLLGGVQLIALGLIGEYLGRLYDESKR 340
F V +++ L LG P W + V+ G Q I +GL+GEY+GR+Y++ +
Sbjct: 248 FSLSVLLIVLRLALG---PQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYNDVRA 304
Query: 341 RPLYFI 346
RP YF+
Sbjct: 305 RPRYFV 310
>gi|2558979 (AF025396) putative dolichol phosphate
mannosyltransferase [Vibrio anguillarum]
Length = 312
Score = 139 bits (346), Expect = 5e-32
Identities = 88/303 (29%), Positives = 152/303 (50%), Gaps = 2/303 (0%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV 101
M ++ +++V P +NE + LL+ ++ L +++D+ S D+T + + ++
Sbjct: 1 MKKKKISIVTPCFNEEDNVELLYEKVKEEFEKLDAYLYEHIFIDNNSVDKTVEKLRSIAK 60
Query: 102 NDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNV 161
D V I SRNFG + GL A +L+ AD QDPPELIP+F+A+W G D V
Sbjct: 61 RDCNVKVILNSRNFGPVRSPHYGLLQGSGDATMLVVADLQDPPELIPEFIAKWEDGNDIV 120
Query: 162 YGTRLERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRF 221
G + E E + +Y +LS + + + F L + ++ L I + +
Sbjct: 121 IGVKSE-SDESPAMYMIRKVYYNFSNKLSESKLVKNYYGFGLYDKKIIEILDSIDDPFPY 179
Query: 222 MKGLFGWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLIT 281
+G+ +GF+ + YR+ R G + F L++ A+ GI S S PLR+ T G I
Sbjct: 180 TRGMIMDLGFKLEKIYYRQPIRRRGVTSTNFLSLYDIAMLGICSHSKIPLRIATISGFIL 239
Query: 282 AVFAFGYG-VWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKR 340
++ +F +++ LK + D G ++ + LG VQ+ +GL+GEY+G L + +
Sbjct: 240 SLISFTLAIIFLALKIIYWDDFPMGTAPIIIGMFFLGSVQIFFIGLVGEYVGHLVAKLSK 299
Query: 341 RPL 343
PL
Sbjct: 300 FPL 302
>gi|1524247|emb|CAB02014| (Z79701) hypothetical protein Rv1500
[Mycobacterium tuberculosis]
Length = 342
Score = 127 bits (315), Expect = 2e-28
Identities = 88/302 (29%), Positives = 151/302 (49%), Gaps = 7/302 (2%)
Query: 47 LTVVVPAY-NEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPR 105
L++V Y +E L AA P+++ +++VDDGS D +L+ +DP
Sbjct: 3 LSIVTTMYMSEPYVLEFYRRARAAADKITPDVE--IIFVDDGSPDAALQQAVSLLDSDPC 60
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARW-RAGYDNVYGT 164
V I+LSRNFG A+ GL + V L+D+D ++ P L+ F + G D V+G
Sbjct: 61 VRVIQLSRNFGHHKAMMTGLAHATGDLVFLIDSDLEEDPALLEPFYEKLISTGADVVFGC 120
Query: 165 RLERQGEGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERHRFMKG 224
R G G ++ F YR L P+ +T RL++ +++L Q +ER + G
Sbjct: 121 HARRPG-GWLRNFGPKIHYRASALLCDPPLHENTLTVRLMTADYVRSLVQHQERELSIAG 179
Query: 225 LFGWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVF 284
L+ GF Q+ + + + G + +TF R ++ +TSFS PL YLG +
Sbjct: 180 LWQITGFYQVPMSVNKAWK--GTTTYTFRRKVATLVDNVTSFSNKPLVFIFYLGAAIFII 237
Query: 285 AFGYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLY 344
+ ++++ + GW +++ I +LGGV + +GL+G Y+ +++ E+K+RP
Sbjct: 238 SSSAAGYLIIDRIFFRALQAGWASVIVSIWMLGGVTIFCIGLVGIYVSKVFIETKQRPYT 297
Query: 345 FI 346
I
Sbjct: 298 II 299
>gi|1799611|dbj|BAA16081| (D90857) DOLICHOL-PHOSPHATE
MANNOSYLTRANSFERASE (EC 2.4.1.83) (DOLICHOL- PHOSPHATE
MANNOSE SYNTHASE) (DOLICHYL-PHOSPHATE BETA-D-
MANNOSYLTRANSFERASE). [Escherichia coli]
Length = 221
Score = 103 bits (255), Expect = 2e-21
Identities = 72/217 (33%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 139 DGQDPPELIPQFVARWRAGYDNVYGTRLERQGEGLVKRFLAASFYRMIGRLSPTPIPTDT 198
D Q+PPE IP+ VA+ GYD V R RQ K + +MI RL
Sbjct: 1 DLQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRK-----TASKMINRLIQRTTGKAM 55
Query: 199 GDF----RLLSPRALQALRQIRERHRFMKGLFGWVGFRQIALPYRREPRLSGGSKFTFWR 254
GD+ R + A+ ER F+ L R I +P R G SK++F R
Sbjct: 56 GDYGCMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMR 115
Query: 255 LWNFALEGITSFSTAPLRVTTYLGLITAVFAFGYGVWIVLKALILGDRVPGWPT-----M 309
L N + +T +T PLR+ + LG I A+ F V +V+ L G P W +
Sbjct: 116 LINLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFG---PQWAAEGVFML 172
Query: 310 MTVILLLGGVQLIALGLIGEYLGRLYDESKRRPLYFI 346
V+ G Q I +GL+GEY+GR+Y + + RP YF+
Sbjct: 173 FAVLFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFV 209
>gi|5726302|gb|AAD48404.1|AF129010_3 (AF129010) CsbB homolog
[Staphylococcus aureus]
Length = 148
Score = 97.9 bits (240), Expect = 1e-19
Identities = 48/126 (38%), Positives = 76/126 (60%)
Query: 221 FMKGLFGWVGFRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLI 280
F KG L + R G SK++F +L+N+ ++G+ SF++ PLR+ YLGL
Sbjct: 3 FQKGYLNGSAIILKCLRIKNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGLF 62
Query: 281 TAVFAFGYGVWIVLKALILGDRVPGWPTMMTVILLLGGVQLIALGLIGEYLGRLYDESKR 340
+ Y +++ + I G +PG+ + + ILLLGG+QLI++G++GEY+GR+Y E K
Sbjct: 63 IFSISVLYIIYLFINIKISGVNIPGYFSTIAAILLLGGIQLISIGVVGEYIGRIYYEVKA 122
Query: 341 RPLYFI 346
RP Y I
Sbjct: 123 RPKYII 128
>gi|4838365|gb|AAD30975.1|AF121895_1 (AF121895)
dolichol-phosphate-mannose synthase [Cricetulus griseus]
Length = 266
Score = 67.1 bits (161), Expect = 2e-10
Identities = 58/203 (28%), Positives = 96/203 (46%), Gaps = 11/203 (5%)
Query: 19 PGRSISPSPAVADGRIAPVPYS-DMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPEL 77
PG S S A A P R+ +V++P YNE + LPL+ +V + + +
Sbjct: 4 PGASRGASAATAAAASPRPPQGRSSRRDKYSVLLPTYNERENLPLIVWLLVKSFSE-SSI 62
Query: 78 DGRLLYVDDGSNDRTWDIIEAL--VVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLL 135
+ ++ +DDGS D T ++ E L + R+ + G A G+ + V++
Sbjct: 63 NYEIIIIDDGSPDGTREVAEQLEKIYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVII 122
Query: 136 LDADGQDPPELIPQFVARWRAG-YDNVYGTRLERQGEGL----VKRFLAASFYRMIGRLS 190
+DAD P+ IP+F+ + + G +D V GTR + G G+ +KR + + I ++
Sbjct: 123 MDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNG-GVYGWDLKRKIISRGANFITQIL 181
Query: 191 PTPIPTD-TGDFRLLSPRALQAL 212
P +D TG FRL LQ L
Sbjct: 182 LRPGASDLTGSFRLYRKEVLQKL 204
>gi|6753670|ref|NP_034202.1|| dolichol-phosphate (beta-D)
mannosyltransferase 1 >gi|3073773|dbj|BAA25759|
(AB004789) dolichol-phosphate-mannose synthase [Mus
musculus]
Length = 260
Score = 66.7 bits (160), Expect = 3e-10
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 21 RSISPSPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGR 80
RS++ SP GR + ++ +V++P YNE + LPL+ +V + + ++
Sbjct: 8 RSLAASPRPPQGRSS-------RQDKYSVLLPTYNERENLPLIVWLLVKSFSE-SAINYE 59
Query: 81 LLYVDDGSNDRTWDIIEAL--VVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDA 138
++ +DDGS D T ++ E L + R+ + G A G+ + V+++DA
Sbjct: 60 IIIIDDGSPDGTREVAEQLAEIYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDA 119
Query: 139 DGQDPPELIPQFVARWRAG-YDNVYGTRLERQGEGL----VKRFLAASFYRMIGRLSPTP 193
D P+ IP+F+ + + G +D V GTR + G G+ +KR + + I ++ P
Sbjct: 120 DLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNG-GVYGWDLKRKIISRGANFITQILLRP 178
Query: 194 IPTD-TGDFRLLSPRALQAL 212
+D TG FRL LQ L
Sbjct: 179 GASDLTGSFRLYRKEVLQKL 198
>gi|5457998|emb|CAB49488.1| (AJ248284) DOLICHYL-PHOSPHATE MANNOSE
SYNTHASE RELATED PROTEIN [Pyrococcus abyssi]
Length = 211
Score = 64.0 bits (153), Expect = 2e-09
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
++V++PAYNE + RI L +PE ++ VDDGS D T D+ + V RV
Sbjct: 3 VSVIIPAYNEEK-------RIGKVLAEIPEFVNEVIVVDDGSKDNTADVAKRFGV---RV 52
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAG-YDNVYGTR 165
I+L N GK A+ G+ + ++ +DADGQ P+ IP+ +A G D V G R
Sbjct: 53 --IRLPENRGKGAAMREGIKHAKGDIIVFMDADGQHDPKEIPKIIAPIIKGDADFVIGKR 110
Query: 166 LERQGEGLVKRFLA 179
+ + G+ + R L+
Sbjct: 111 VIKAGKRPLVRKLS 124
>gi|2258418 (AF007875) dolichol monophosphate mannose synthase [Homo
sapiens]
Length = 253
Score = 63.2 bits (151), Expect = 4e-09
Identities = 48/173 (27%), Positives = 87/173 (49%), Gaps = 10/173 (5%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL--VVNDPR 105
+V++P YNE + LPL+ +V + + ++ ++ +DDGS D T D+ E L + R
Sbjct: 21 SVLLPTYNERENLPLIVWLLVKSFSE-SGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDR 79
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAG-YDNVYGT 164
+ + G A G+ + ++++DAD P+ IP+F+ + + G +D GT
Sbjct: 80 ILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKKKEGNFDIASGT 139
Query: 165 RLERQGEGL----VKRFLAASFYRMIGRLSPTPIPTD-TGDFRLLSPRALQAL 212
R + G G+ +KR + + + ++ TP +D TG FRL L+ L
Sbjct: 140 RYKGNG-GIYGWDLKRKIISRGANFLTQILLTPGASDLTGSFRLYPKEVLEKL 191
>gi|4503363|ref|NP_003850.1|| dolichyl-phosphate mannosyltransferase
polypeptide 1 >gi|3062806|dbj|BAA25646| (D86198)
dolichol-phosphate-mannose synthase [Homo sapiens]
>gi|5817251|emb|CAB53749.1| (AL034553) dJ914P20.1
(dolichyl-phosphate mannosyltransferase polypeptide 1,
catalytic subunit) [Homo sapiens]
Length = 260
Score = 62.5 bits (149), Expect = 6e-09
Identities = 48/173 (27%), Positives = 87/173 (49%), Gaps = 10/173 (5%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL--VVNDPR 105
+V++P YNE + LPL+ +V + + ++ ++ +DDGS D T D+ E L + R
Sbjct: 28 SVLLPTYNERENLPLIVWLLVKSFSE-SGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDR 86
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAG-YDNVYGT 164
+ + G A G+ + ++++DAD P+ IP+F+ + + G +D V GT
Sbjct: 87 ILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGT 146
Query: 165 RLERQGEGL----VKRFLAASFYRMIGRLSPTPIPTD-TGDFRLLSPRALQAL 212
R + G G+ +KR + + + ++ P +D TG FRL L+ L
Sbjct: 147 RYKGNG-GVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKL 198
>gi|5457491|emb|CAB48982.1| (AJ248283) DOLICHOL-PHOSPHATE
MANNOSYLTRANSFERASE [Pyrococcus abyssi]
Length = 362
Score = 60.9 bits (145), Expect = 2e-08
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
++V+VP YNE + L L RI AL + D ++ VDD S D TW + L P V
Sbjct: 14 VSVIVPTYNERENLEELFSRIDKALK---DYDYEIIVVDDDSPDETWKKAQELSSVYP-V 69
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
I+ G A+ G +++DAD Q PPE+IP+ + R + G D +R
Sbjct: 70 KVIRRINEKGLSSAVIRGFKEASGDVFVVMDADLQHPPEVIPELLKRIKEGADLAIASRY 129
Query: 167 ERQG 170
+ G
Sbjct: 130 VKGG 133
>gi|2258414 (AF007873) dolichol monophosphate mannose synthase
[Schizosaccharomyces pombe] >gi|2388967|emb|CAB11700|
(Z98979) dolichol monophosphate mannose synthase
[Schizosaccharomyces pombe]
Length = 236
Score = 60.9 bits (145), Expect = 2e-08
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL--VVNDPR 105
+V++P YNE + LP++ I + +LD ++ +DD S D T ++ + L + + +
Sbjct: 5 SVLLPTYNERKNLPIITYLIAKTFDQ-EKLDWEIVIIDDASPDGTQEVAKELQKIYGEDK 63
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRA-GYDNVYGT 164
+ S G A GL V+++DAD P+ +P+F+ + YD V GT
Sbjct: 64 ILLKPRSGKLGLGTAYIHGLKFATGDFVIIMDADFSHHPKYLPEFIKLQKEHNYDIVLGT 123
Query: 165 RLERQGE----GLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLSPRALQAL 212
R + G L ++F++ + + T + TG FRL L+ L
Sbjct: 124 RYAKDGGVYGWNLKRKFISRGANLLASTVLGTGVSDVTGSFRLYKKPVLETL 175
>gi|3256436|dbj|BAA29119.1| (AP000001) 353aa long hypothetical
dolichol-phosphate mannosyltransferase [Pyrococcus
horikoshii]
Length = 353
Score = 57.0 bits (135), Expect = 3e-07
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
++++VP YNE L L RI +AL D ++ VDD S D+TW+ L P V
Sbjct: 3 VSIIVPTYNERDNLEELFSRISSALKGY---DYEIIIVDDDSPDKTWEKAMELSKLYP-V 58
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
I+ G A+ G +++DAD Q PPE+IP + G D +R
Sbjct: 59 KVIRRVNEKGLSSAVIRGFSEASGDVFVVMDADLQHPPEVIPSLLREIEKGNDIAIASRY 118
Query: 167 ERQGE 171
+ G+
Sbjct: 119 VKGGK 123
>gi|4150880|emb|CAA10541.1| (AJ131960) dolichol phosphate mannose
synthase [Leishmania mexicana]
Length = 262
Score = 55.4 bits (131), Expect = 8e-07
Identities = 42/121 (34%), Positives = 60/121 (48%), Gaps = 3/121 (2%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNT--LPELDGRLLYVDDGSNDRTWDIIEALVVNDPR 105
+++VPAY E L L R+ AA+ LP + +L VDD S D + +++E
Sbjct: 4 SIIVPAYKECGNLEPLVRRVFAAVREQGLPTQNVEMLIVDDNSCDGSKEVVERFHKEGFN 63
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQ-FVARWRAGYDNVYGT 164
V + G A+ GL +T L++DAD Q PPE +P F A R G + V GT
Sbjct: 64 VSMDVRTTERGLSSAVIHGLRHTSGVYKLVMDADLQHPPECVPALFKALSRDGVEFVCGT 123
Query: 165 R 165
R
Sbjct: 124 R 124
>gi|5104068|dbj|BAA79384.1| (AP000059) 373aa long hypothetical
dolichol-phosphate-mannosyltransferase [Aeropyrum
pernix]
Length = 373
Score = 55.0 bits (130), Expect = 1e-06
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
++V+VP NE + L++ + +L +++VDD S D T + +E L +DPRV
Sbjct: 23 VSVIVPTLNERDNIRPLYVGLKKSLEGAGLECFEIVFVDDSSTDGTIEEVERLSRSDPRV 82
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNV----- 161
I G A+ GL +++DAD Q PPE +P V + G ++
Sbjct: 83 RLIVRRGEKGLSRAVLEGLRRARGRVAVVMDADLQHPPETVPLLVEKVAGGEADLAVASR 142
Query: 162 YGTRLERQGEGLVKRFLAASFYRMIGRLSPTPIPTD---TGDFRLLSPRALQALRQIRER 218
Y +G LV+R ++ + L P T +G F + R A+ R
Sbjct: 143 YAPGGRVEGWSLVRRIISRGAVLLAWLLIPESRRTRDPVSGFFAVNLERVRPAIVSGRGF 202
Query: 219 HRFMKGLFGWVGFRQIALPYRREPRLSGGSK 249
++ L+ R + +P+ R G SK
Sbjct: 203 KILLEILYTNPYARVVDVPFTFRGRSRGSSK 233
>gi|2337823|emb|CAB11300| (Z98604) hypothetical protein MLCB2052.02
[Mycobacterium leprae]
Length = 277
Score = 54.7 bits (129), Expect = 1e-06
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 45 ECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDP 104
+C+ V++P +NE + LP+ H R+ A PE+ +L VDDGS D T ++ + L DP
Sbjct: 17 QCVLVIIPTFNELENLPVTHGRLKDA---YPEI--HVLIVDDGSPDGTGELADELAQVDP 71
Query: 105 RVGGI-KLSRNFGKEIAITAGLD---NTPFGAVLLLDADGQDPPELIPQFVARWRAGYDN 160
+ + G A AG + + ++ +DADG PE + + + AG D
Sbjct: 72 GCTHVMHRTTKDGLGTAYLAGFAWGMSRDYSVLVEMDADGSHAPEQLHRLLGAVDAGADL 131
Query: 161 VYGTRLERQG 170
G+R G
Sbjct: 132 AIGSRYVNGG 141
>gi|5458583|emb|CAB50071.1| (AJ248286) glycosyl transferase
[Pyrococcus abyssi]
Length = 298
Score = 54.7 bits (129), Expect = 1e-06
Identities = 59/219 (26%), Positives = 90/219 (40%), Gaps = 43/219 (19%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV 101
M+R ++V++P YN A L R +A++ D L+ VDD S D T +++E+ +
Sbjct: 1 MSRPIVSVIIPTYNRANLLR----RAIASVLNQKFKDFELIVVDDASTDNTPEVVES--I 54
Query: 102 NDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNV 161
D R+ I+L +N G IA G+ + LLD D + P + V
Sbjct: 55 EDGRIRYIRLKKNSGGPIARNIGIKKAKGRFIALLDDDDEWLPHRLEVQV---------- 104
Query: 162 YGTRLERQGEGLVKRF--LAASFYRMI--GRLSPTPIPTDTGDF--RLLSPRALQALRQI 215
R+ E L K F + FY + GR+ +P GD LL + + +
Sbjct: 105 ------RKFENLGKEFGVVYGGFYYVSQDGRILGKRLPKHRGDIYSHLLKENFIGSPTLL 158
Query: 216 RERHRFMK-GLFGWVGFRQIALPYRREPRLSGGSKFTFW 253
R F K GLF +PRLS + W
Sbjct: 159 IRRECFKKAGLF--------------DPRLSSSQDWDMW 183
>gi|3258025|dbj|BAA30708| (AP000006) 215aa long hypothetical protein
[Pyrococcus horikoshii]
Length = 215
Score = 53.9 bits (127), Expect = 2e-06
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
++V++PAYNE + RI L +P+ ++ VDDGS+D T + L
Sbjct: 7 ISVIIPAYNEER-------RIGNVLKGIPDFVDEVIVVDDGSSDGTSKVAMELGATV--- 56
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAG-YDNVYGTR 165
I+L++N GK A+ GL + ++ +DADGQ P+ I + V G D V G R
Sbjct: 57 --IRLNKNSGKGAAMREGLKISTGDIIVFMDADGQHNPKEIYRLVKPIVEGRADLVIGRR 114
Query: 166 LERQGEGLVKR 176
+ +G+ + R
Sbjct: 115 IITRGKRPMSR 125
>gi|1653517|dbj|BAA18430| (D90914) dolichyl-phosphate-mannose
synthase [Synechocystis sp.]
Length = 390
Score = 53.5 bits (126), Expect = 3e-06
Identities = 65/251 (25%), Positives = 101/251 (39%), Gaps = 38/251 (15%)
Query: 25 PSPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYV 84
PSPA A + + + L++V+P YNE + + + +V L L+ V
Sbjct: 7 PSPATA---LTVPKLGEADGIFLSLVLPTYNEGENIQAMVTTLVKLLENRWSGQYELIVV 63
Query: 85 DDGSNDRTWDIIEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPP 144
DD S D TW L P++ I+ + G A+ G + ++DAD Q PP
Sbjct: 64 DDDSPDLTWQKAFNLSDTYPQLRVIRRTEGRGLSTAVIRGWQEARGNFLGVIDADLQHPP 123
Query: 145 ELIPQFVARWRAGYDNVYGTRLERQGE----GLVKRFLAAS--------FYRMIGRLSPT 192
+++ +A G D +R + G LV+R L+ +IGRLS
Sbjct: 124 QVLLALLAEMERGADLAVASRHQSGGGVSQWSLVRRLLSRGAQMLGLLILPEVIGRLSDP 183
Query: 193 PIPTDTGDFRL---------LSPRALQALRQIRERHRFMKGLFGWVGFRQIALPYRREPR 243
+G F + LSP + L ++ R G W+ + Y + R
Sbjct: 184 M----SGFFLVRRQAIADCPLSPVGYKILIEVTAR-----GRIRWLA----EVGYVFQER 230
Query: 244 LSGGSKFTFWR 254
SG SK T WR
Sbjct: 231 RSGQSKVT-WR 240
>gi|2621438 (AE000823) dolichyl-phosphate mannose synthase related
protein [Methanobacterium thermoautotrophicum]
Length = 248
Score = 53.1 bits (125), Expect = 4e-06
Identities = 52/178 (29%), Positives = 82/178 (45%), Gaps = 26/178 (14%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIE---ALVVND 103
+ V+PA+NE +T+ + + AL G ++ VDDGS DRT + E A V++
Sbjct: 25 VVTVIPAFNEERTVESV---VRGALE-----HGDVILVDDGSTDRTAALGEEAGARVISH 76
Query: 104 PRVGGIKLSRNFGKEIAITAGLDNT---PFGAVLLLDADGQDPPELIPQFVARWRAGYDN 160
P+ N GK A+ G+ + ++ +DADGQ P LIP+ + G D
Sbjct: 77 PK--------NLGKGAALKTGIREALGGDYDVIVFMDADGQHDPSLIPELASAVNGG-DF 127
Query: 161 VYGTRLERQGEGL--VKRFLAASFYRMIGRLSPTPIPTDT-GDFRLLSPRALQALRQI 215
+ G+R R + R L+ I RL+ TD+ FR +S R + +I
Sbjct: 128 IIGSRFIRNNHDSMPLHRQLSNRITTWILRLATGYRITDSQSGFRAISARYAHLILEI 185
>gi|2896788|emb|CAA17265| (AL021899) hypothetical protein Rv2051c
[Mycobacterium tuberculosis]
Length = 874
Score = 52.3 bits (123), Expect = 7e-06
Identities = 39/136 (28%), Positives = 64/136 (46%), Gaps = 11/136 (8%)
Query: 36 PVPYSDMNR--ECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTW 93
P P + NR + + V++P +NE + LP++H R+ A + +L VDD S D T
Sbjct: 599 PAPPAPGNRPSQRVLVIIPTFNERENLPVIHRRLTQACPAV-----HVLVVDDSSPDGTG 653
Query: 94 DIIEALVVNDP-RVGGIKLSRNFGKEIAITAGLD---NTPFGAVLLLDADGQDPPELIPQ 149
+ + L DP R + + G A AG + + ++ +DADG PE + +
Sbjct: 654 QLADELAQADPGRTHVMHRTAKNGLGAAYLAGFAWGLSREYSVLVEMDADGSHAPEQLQR 713
Query: 150 FVARWRAGYDNVYGTR 165
+ AG D G+R
Sbjct: 714 LLDAVDAGADLAIGSR 729
>gi|4226150 (AF125462) similar to glycosyl transferases
(Pfam:PF00535, Score=80.8, E=2.9e-20, N=1); strong
similarity to dolichol-phosphate-mannose synthase
[Caenorhabditis elegans]
Length = 244
Score = 51.9 bits (122), Expect = 9e-06
Identities = 50/179 (27%), Positives = 81/179 (44%), Gaps = 24/179 (13%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL-------- 99
++++P YNE + LP+ I N L E+ ++ VDD S D T I + L
Sbjct: 13 SIILPTYNEKENLPIC---IWLIENYLKEVSHEVIIVDDASPDGTQGIAKLLQKEYGDDK 69
Query: 100 VVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVA-RWRAGY 158
++ PRVG + L + ++ G ++L+DAD P+ IP+ +A + +
Sbjct: 70 ILIKPRVGKLGLGTAYSHGLSFARG------EFIILMDADLSHHPKFIPEMIALQHKYKL 123
Query: 159 DNVYGTRLERQGEGL----VKRFLAASFYRMIGRLSPTPIPTD-TGDFRLLSPRALQAL 212
D V GTR + G G+ +KR + + + P +D TG FRL L L
Sbjct: 124 DIVTGTRY-KDGGGVSGWDLKRKTISKGANFLAQFLLNPGVSDLTGSFRLYKRDILSKL 181
>gi|6325441|ref|NP_015509.1|DPM1| dolichol phosphate mannose
synthase; Dpm1p >gi|118823|sp|P14020|DPM1_YEAST
DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE
(DOLICHOL-PHOSPHATE MANNOSE SYNTHASE)
(DOLICHYL-PHOSPHATE BETA-D-MANNOSYLTRANSFERASE)
>gi|83002|pir||A32122 dolichyl-phosphate
beta-D-mannosyltransferase (EC 2.4.1.83) precursor -
yeast (Saccharomyces cerevisiae) >gi|171418 (J04184)
dolichol phosphate mannose synthase precursor (EC
2.4.1.83) [Saccharomyces cerevisiae] >gi|786315 (U25842)
Dolichol-phosphate mannosyltransferase
(Dolichol-phosphate mannose synthase) (Swiss Prot.
accession number P14020) [Saccharomyces cerevisiae]
Length = 267
Score = 51.5 bits (121), Expect = 1e-05
Identities = 68/253 (26%), Positives = 112/253 (43%), Gaps = 29/253 (11%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRVG 107
+V+VPAY+E + L R+ A ++ L++VDD S D + + ++AL V
Sbjct: 6 SVIVPAYHEKLNIKPLTTRLFAGMSPEMAKKTELIFVDDNSQDGSVEEVDALAHQGYNVR 65
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVY--GTR 165
I + G A+ G ++ +DAD Q PPE +P+ + + +D+ + GTR
Sbjct: 66 IIVRTNERGLSSAVLKGFYEAKGQYLVCMDADLQHPPETVPKL---FESLHDHAFTLGTR 122
Query: 166 LERQGEGLVK-----RFLAASFYRMIGRLSPTPIPTD--TGDFRLLSPRALQALRQIRER 218
G G+ K R + +S RM+ R P I +D +G F L + L R
Sbjct: 123 Y-APGVGIDKDWPMYRRVISSTARMMAR--PLTIASDPMSGFFGLQK----KYLENCNPR 175
Query: 219 HRFMKGLFGWVGFRQIA-LPYRREPRLS-GGSKFTFWRLWNFALEGITSFSTAPLRVTTY 276
+G + +A LP R+PR++ G FTF EG + S + Y
Sbjct: 176 DINSQGF--KIALELLAKLPLPRDPRVAIGEVPFTF----GVRTEGESKLSGKV--IIQY 227
Query: 277 LGLITAVFAFGYG 289
L + ++ F +G
Sbjct: 228 LQQLKELYVFKFG 240
>gi|6911992|emb|CAB72208.1| (AL138851) putative bi-functional
transferase/deacetylase [Streptomyces coelicolor A3(2)]
Length = 734
Score = 51.5 bits (121), Expect = 1e-05
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
Query: 45 ECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDP 104
E +TV+VPAYNEA+ + +VA+ + + ++ +DDGS+D T I+E L
Sbjct: 360 EPVTVLVPAYNEAKCIENTVRSLVASDHPV-----EVIVIDDGSSDGTARIVEGL----- 409
Query: 105 RVGGIKLSR--NFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFV 151
+ G+++ R N GK A+ GL N + V+++D D P + + V
Sbjct: 410 GLPGVRVIRQLNAGKPAALNRGLANARYDIVVMMDGDTVFEPSTVRELV 458
>gi|4106593|emb|CAA21348| (AL031866) ORF25, len: 457 aa, hmsR, 99,8%
identity with Yersinia pestis hemin binding protein
Q56941, Fasta scores opt: 3002, E(): 0 [Yersinia pestis]
Length = 457
Score = 50.8 bits (119), Expect = 2e-05
Identities = 39/151 (25%), Positives = 67/151 (43%), Gaps = 12/151 (7%)
Query: 47 LTVVVPAYNEA-QTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPR 105
++++VP +NE +H + + ++ ++DGS+D T +++AL+ DPR
Sbjct: 90 VSILVPCFNEGLNARETIHAALAQTYTNI-----EVIAINDGSSDDTAQVLDALLAEDPR 144
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG----QDPPELIPQFVARWRAGYDNV 161
+ I L+ N GK IA+ G ++ +D D P L+ +A R G V
Sbjct: 145 LRVIHLAHNQGKAIALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTG--AV 202
Query: 162 YGTRLERQGEGLVKRFLAASFYRMIGRLSPT 192
G R L+ R F +IG + T
Sbjct: 203 TGNPRIRTRSTLIGRVQVGEFSSIIGLIKRT 233
>gi|1185391|gb|AAB66590| (U22837) HmsR [Yersinia pestis]
Length = 457
Score = 50.8 bits (119), Expect = 2e-05
Identities = 39/151 (25%), Positives = 67/151 (43%), Gaps = 12/151 (7%)
Query: 47 LTVVVPAYNEA-QTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPR 105
++++VP +NE +H + + ++ ++DGS+D T +++AL+ DPR
Sbjct: 90 VSILVPCFNEGLNARETIHAALAQTYTNI-----EVIAINDGSSDDTAQVLDALLAEDPR 144
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG----QDPPELIPQFVARWRAGYDNV 161
+ I L+ N GK IA+ G ++ +D D P L+ +A R G V
Sbjct: 145 LRVIHLAHNQGKAIALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTG--AV 202
Query: 162 YGTRLERQGEGLVKRFLAASFYRMIGRLSPT 192
G R L+ R F +IG + T
Sbjct: 203 TGNPRIRTRSTLIGRVQVGEFSSIIGLIKRT 233
>gi|2258416 (AF007874) dolichol monophosphate mannose synthase
[Caenorhabditis briggsae]
Length = 242
Score = 49.6 bits (116), Expect = 5e-05
Identities = 47/179 (26%), Positives = 79/179 (43%), Gaps = 24/179 (13%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL-------- 99
++++P YNE + LP+ I L + ++ VDD S D T D+ + L
Sbjct: 11 SIILPTYNEKENLPIC---IWLIEKYLKGISYEIIIVDDASPDGTQDVAKLLEKEYGENK 67
Query: 100 VVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVA-RWRAGY 158
++ PR G + L + ++ G ++L+DAD P+ IP+ +A + +
Sbjct: 68 ILIKPRAGKLGLGTAYSHGLSFARG------EFIILMDADLSHHPKFIPEMIALQQKYKL 121
Query: 159 DNVYGTRLERQGEGL----VKRFLAASFYRMIGRLSPTPIPTD-TGDFRLLSPRALQAL 212
D V GTR + G G+ +KR + + + P +D TG FRL L L
Sbjct: 122 DIVTGTRY-KNGGGVSGWDLKRKTISKGANFLAQFLLNPGVSDLTGSFRLYKKEVLATL 179
>gi|3256833|dbj|BAA29516| (AP000002) 334aa long hypothetical protein
[Pyrococcus horikoshii]
Length = 334
Score = 49.2 bits (115), Expect = 6e-05
Identities = 29/98 (29%), Positives = 49/98 (49%), Gaps = 4/98 (4%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV 101
M + ++VV+P YN A+ LP R + ++ + L+ VDDGS D T +II
Sbjct: 1 MEKGLVSVVLPTYNRAKVLP----RAIESVLNQTYTNIELIIVDDGSRDNTKEIIREFQS 56
Query: 102 NDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
D R+ ++ RN G A G+ ++ + +D+D
Sbjct: 57 QDERIVYLRNKRNLGANAARNIGIMHSTGEFIAFMDSD 94
>gi|6468712|emb|CAB61668.1| (AL133213) putative glycosyl
transferase. [Streptomyces coelicolor A3(2)]
Length = 302
Score = 48.8 bits (114), Expect = 8e-05
Identities = 50/196 (25%), Positives = 83/196 (41%), Gaps = 20/196 (10%)
Query: 24 SPSPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLY 83
+P+ A + R P+ + V++P YNEA+ + + R+ A+ PE +L
Sbjct: 7 TPAAAARERRFGPLGTA-------LVIIPTYNEAENIKAIVTRVREAV---PE--AHVLV 54
Query: 84 VDDGSNDRTWDIIEALVVNDPRVGGIKLSRNFGKEIAITAGLD---NTPFGAVLLLDADG 140
DD S D T + + L D V + G A AG +G ++ +DADG
Sbjct: 55 ADDNSPDGTGKLADELAAADDHVQVMHRKGKEGLGAAYLAGFRWGLEHGYGVLIEMDADG 114
Query: 141 QDPPELIPQFVARWRAGYDNVYGTRLERQGEGL---VKRFLAASFYRMIGRLS-PTPIPT 196
PE +P+ + + G D V G+R G + R + + M R++ P+
Sbjct: 115 SHQPEELPRLLTALK-GADLVLGSRWVPGGRVVNWPKSREIISRGGSMYSRIALDLPLRD 173
Query: 197 DTGDFRLLSPRALQAL 212
TG +R L+ L
Sbjct: 174 ITGGYRAFRRETLEGL 189
>gi|3256836|dbj|BAA29519| (AP000002) 304aa long hypothetical protein
[Pyrococcus horikoshii]
Length = 304
Score = 48.4 bits (113), Expect = 1e-04
Identities = 69/311 (22%), Positives = 129/311 (41%), Gaps = 36/311 (11%)
Query: 45 ECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELD-GRLLYVDDGSNDRTWDIIEALVVND 103
E +T+++P NE + + + + +L +L +D S DRT +I +
Sbjct: 8 EDVTILIPTKNEEEGIGWV-------IEEFKKLGYNNILVIDGHSTDRTREIAKE----- 55
Query: 104 PRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGY-DNVY 162
+ + L GK A+ V+L+D DG P+ + + + R G ++V
Sbjct: 56 -KGAKVVLQTGKGKGQAVAEAFKLIDSEVVVLIDGDGTYDPKDVEKMLEPIRRGIAEHVI 114
Query: 163 GTRLERQGEGLVKRFLAAS---FYRMIGRLSPTPIPTDTGDFRLLSPRALQALRQIRERH 219
G RLE +G R F + L P+ +R + +++ ++H
Sbjct: 115 GNRLENFEDGAFTRLNLIGNKIFNALFRFLYGVPVYDMLSGYRAFTKELYKSVEL--KKH 172
Query: 220 RFMKGLFGWV-----GFRQIALP---YRREPRLSGGSKFTFWRLWNFALEGITSFSTAPL 271
F V GFR +P Y+R+ + + WR+ +E + ++ P
Sbjct: 173 GFEVETELTVETVAKGFRIAEVPINYYKRKGKANLHPIKDGWRIGKAIIELLVRYN--PA 230
Query: 272 RVTTYLGLITAVFAFGYGVWIVLKAL--ILGDRVPGWPTMMTVILLLGGVQLIALGLIGE 329
+ +LG + + GV++V + + D + ++ IL+LGGVQ IA+G +
Sbjct: 231 KYLYFLGGLFLLLGLITGVYVVYEWFHHVSHDLL----AIVVAILVLGGVQFIAVGFVLG 286
Query: 330 YLGRLYDESKR 340
Y+ + E KR
Sbjct: 287 YMFKSMSEMKR 297
>gi|6598395|gb|AAF18606.1|AC003674_1 (AC003674) putative
dolichyl-phosphate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 336
Score = 47.6 bits (111), Expect = 2e-04
Identities = 40/118 (33%), Positives = 59/118 (49%), Gaps = 13/118 (11%)
Query: 34 IAPVP---YSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDG----RLLYVDD 86
I P+P +D + L+++VPAYNE LP + L D ++ VDD
Sbjct: 52 IKPIPCPHITDPAEKYLSLIVPAYNEELRLPAALEETMDYLQDRASRDKSFSFEVVIVDD 111
Query: 87 GSNDRT----WDIIEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG 140
GS D T +D I +++ RV I L +N GK AI G+ ++ +L+LDADG
Sbjct: 112 GSVDGTKRVAFDFIRKYTIDNIRV--IPLGKNQGKGEAIRKGMLHSRGQLLLMLDADG 167
>gi|2650038 (AE001064) dolichol-P-glucose synthetase, putative
[Archaeoglobus fulgidus]
Length = 581
Score = 47.3 bits (110), Expect = 2e-04
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+++V+PAYNEA+ L ++ A D ++ +DGS D T I L ++PR+
Sbjct: 56 ISIVLPAYNEAKRLRGAVEEVIKAAEKTG-YDFEIIIAEDGSKDGTDRIAAELAASNPRI 114
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD-GQDPPELIPQFVARWRAGYDNVYGTR 165
+ G+ A+ V+ +D D D L A GYD G+R
Sbjct: 115 KHLHSDERLGRGRALMNAFSKASGDVVVYMDVDLATDLSHLKELVDAIIVEGYDFSTGSR 174
Query: 166 L--ERQGEGLVKRFLAASFYRMIGRL 189
L E Q + KR +A+ Y + RL
Sbjct: 175 LMKESQTDRPAKREIASRGYNFLVRL 200
>gi|4262643|gb|AAD14758| (AF125965) similar to glycosyl transferases
(Pfam:PF00535, Score:55.6, E= 1.1e-12, N=1)
[Caenorhabditis elegans]
Length = 697
Score = 46.5 bits (108), Expect = 4e-04
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 31 DGRIAPVPYSDMNREC-LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLY----VD 85
+ R AP Y+ + C L+V++PA NE + + ++ L E D Y VD
Sbjct: 68 EDRDAPKRYTPSS--CYLSVIIPAMNEVERIEIMLDDCCDYLEARAEKDKDFTYEIIVVD 125
Query: 86 DGSNDRTWDIIEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG 140
DGS D T DI+ + + +K+ N GK A+ G+ ++ +L DADG
Sbjct: 126 DGSTDETADIVVQIGARRQNLRVLKMKANRGKGGAVKMGVLHSSGKLILFADADG 180
>gi|5281121|gb|AAD41465.1|AF102850_1 (AF102850) dolichyl-phosphate
beta-glucosyltransferase [Homo sapiens]
>gi|6841520|gb|AAF29113.1|AF161498_1 (AF161498) HSPC149
[Homo sapiens]
Length = 324
Score = 46.5 bits (108), Expect = 4e-04
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLY----VDDGSNDRTWDII--EALV 100
L+VVVP+YNE + LP++ ++ L + D Y VDDGS D+T +
Sbjct: 67 LSVVVPSYNEEKRLPVMMDEALSYLEKRQKRDPAFTYEVIVVDDGSKDQTSKVAFKYCQK 126
Query: 101 VNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG 140
+V I L +N GK AI G+ ++ +L+ DADG
Sbjct: 127 YGSDKVRVITLVKNRGKGGAIRMGIFSSRGEKILMADADG 166
>gi|2621435 (AE000823) dolichyl-phosphate mannose synthase related
protein [Methanobacterium thermoautotrophicum]
Length = 291
Score = 46.1 bits (107), Expect = 5e-04
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+ V+PA+NE + I + + E ++ VDDGS DRT + E + RV
Sbjct: 3 IVAVIPAFNE-------EVAIGSVVLLTGEHVDEVIVVDDGSADRTAHVAE---MAGARV 52
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVAR-WRAGYDNVYGTR 165
I+ RN GK A+ G + ++ LDAD Q P IP+ V R D V G+R
Sbjct: 53 --IRHHRNLGKGAALKTGFEAADADVIVTLDADAQHNPAEIPKLVEPILRGEADVVNGSR 110
>gi|5042285|emb|CAB44539.1| (AL078618) putative bi-functional
transferase/deacetylase [Streptomyces coelicolor]
Length = 743
Score = 46.1 bits (107), Expect = 5e-04
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
++V+VPAYNE + + LR +A +T P ++ VDDGS D T DI E+L + RV
Sbjct: 389 VSVIVPAYNEKECIEAT-LRSLAR-STHPV---EIIVVDDGSTDGTADIAESLGLPGVRV 443
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFV 151
N GK A+ G+ + + V+++D D P+ + V
Sbjct: 444 ---VRQANAGKPAALNNGVRHARYDIVVMMDGDTVFEPDTVRHLV 485
>gi|1706499|sp|P54856|DPM1_USTMA DOLICHOL-PHOSPHATE
MANNOSYLTRANSFERASE (DOLICHOL-PHOSPHATE MANNOSE
SYNTHASE) (DOLICHYL-PHOSPHATE
BETA-D-MANNOSYLTRANSFERASE) >gi|1322289 (U54797)
dolichyl phosphoryl mannose synthase [Ustilago maydis]
Length = 294
Score = 44.9 bits (104), Expect = 0.001
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Query: 39 YSDMNRECLTVVVPAYNEAQTLPLLHLRIVAAL--NTLPEL-DGRLLYVDDGSNDRTWDI 95
+S + +V+VPA+ E L L R+ +A + EL + ++ VDD S D + +
Sbjct: 22 WSTSSTPSCSVIVPAFRENLNLRPLVTRLSSAFASQSSSELANTEIIIVDDNSRDGSVET 81
Query: 96 IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
+ AL V I + G A+ G ++ +DAD Q PPE +P +
Sbjct: 82 VSALQSEGYNVRIIVATSERGLSSAVVRGFREARGQRMICMDADLQHPPEAVPSLLLALN 141
Query: 156 AGYDNVYGTR 165
V GTR
Sbjct: 142 GQKSFVLGTR 151
>gi|4205912 (AF063450) nodulation protein C [Rhizobium sp. Sh19351]
Length = 186
Score = 43.0 bits (99), Expect = 0.004
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 20 GRSISPSPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDG 79
G P+ + A P+P D V+VP +NE + L +A + L EL
Sbjct: 30 GPXNGPAVSAAPIETGPLPAVD-------VIVPXFNEDPGIFSACLASIADQDYLGEL-- 80
Query: 80 RLLYVDDGSNDRTWDI-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDA 138
R+ VDDGS +R + + DPR I L N GK A A + + VL +D+
Sbjct: 81 RVYVVDDGSRNREAIVCVHDSYARDPRFSFILLPENVGKRKAQIAAIGQSSGDLVLNVDS 140
Query: 139 DGQDPPELIPQFVARWR 155
D +++ + ++ R
Sbjct: 141 DSTIACDVVSKLASKMR 157
>gi|4205915 (AF063451) nodulation protein C [Rhizobium sp. N95]
Length = 187
Score = 43.0 bits (99), Expect = 0.004
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 25 PSPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYV 84
P+ + A P+P D V+VP++NE + L +A + L EL R+ V
Sbjct: 36 PAVSAAPIETGPLPAVD-------VIVPSFNEDPGILSACLASIADQDYLGEL--RVYVV 86
Query: 85 DDGSNDRTWDI-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDP 143
DDGS +R + + DPR I L N GK A A + + VL +D+D
Sbjct: 87 DDGSRNREAIVCVHDSYARDPRFXFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIA 146
Query: 144 PELIPQFVARWR 155
+++ + ++ R
Sbjct: 147 CDVVSKLASKMR 158
>gi|2271519 (AF009829) unknown [Mycobacterium bovis]
Length = 218
Score = 43.0 bits (99), Expect = 0.004
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIE---A 98
M + +TVV+P NE ++LP + I A R L VD+ S D T + A
Sbjct: 1 MAGDAVTVVLPCLNEEESLPAVLAAIPAGY--------RALVVDNNSTDDTATVAARHGA 52
Query: 99 LVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGY 158
VV +PR G +G A+ AG+ V ++DADG +P+ VA G
Sbjct: 53 QVVVEPRPG-------YGS--AVHAGVLAATTPIVAVIDADGSMDAGDLPKLVAELDKGA 103
Query: 159 DNVYGTR 165
D V G R
Sbjct: 104 DLVTGRR 110
>gi|2495587|sp|P75905|YCDQ_ECOLI HYPOTHETICAL 50.8 KD PROTEIN IN
PHOH-CSGG INTERGENIC REGION >gi|1787259 (AE000204) orf,
hypothetical protein [Escherichia coli]
>gi|4062586|dbj|BAA35803| (D90739) Glycosyl transferase
(lgtD) homolog [Escherichia coli]
Length = 441
Score = 42.6 bits (98), Expect = 0.006
Identities = 27/109 (24%), Positives = 52/109 (46%), Gaps = 7/109 (6%)
Query: 32 GRIAPVPYSDMNRECLTVVVPAYNEAQTLP-LLHLRIVAALNTLPELDGRLLYVDDGSND 90
G AP P N +++++P +NE + + +H + + ++ V+DGS D
Sbjct: 63 GENAPAPQLKDNPS-ISIIIPCFNEEKNVEETIHAALAQRYENI-----EVIAVNDGSTD 116
Query: 91 RTWDIIEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
+T I++ + P + I L++N GK IA+ G ++ +D D
Sbjct: 117 KTRAILDRMAAQIPHLRVIHLAQNQGKAIALKTGAAAAKSEYLVCIDGD 165
>gi|5458999|emb|CAB50485.1| (AJ248288) HYALURONAN SYNTHASE RELATED
[Pyrococcus abyssi]
Length = 350
Score = 42.6 bits (98), Expect = 0.006
Identities = 34/110 (30%), Positives = 58/110 (51%), Gaps = 7/110 (6%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
++V++PAYNE + + I AAL+ ++ ++ VDDGS D T++ +A V D RV
Sbjct: 38 VSVIIPAYNEEEN---IKKAIKAALSQDYPVE-EVIVVDDGSEDGTYE--KAKEVKDERV 91
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRA 156
I++ GK AI GL +++ DAD + + + V R+ +
Sbjct: 92 KVIRIEHK-GKAGAINEGLKLAKGEVIVVTDADSFMSRDAVRRLVERFHS 140
>gi|128446|sp|P04341|NODC_RHIME N-ACETYLGLUCOSAMINYLTRANSFERASE
(NODULATION PROTEIN C) >gi|152344 (M11268) nodulation
protein [Sym plasmid]
Length = 426
Score = 42.2 bits (97), Expect = 0.008
Identities = 34/123 (27%), Positives = 56/123 (44%), Gaps = 3/123 (2%)
Query: 34 IAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTW 93
+A P + V+VP++NE + L +A + EL R+ VDDGS +R
Sbjct: 38 VAAEPVETRPLPAVDVIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREA 95
Query: 94 DI-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVA 152
+ + A DPR I L N GK A A + + VL +D+D +++ + +
Sbjct: 96 IVRVRAFYSRDPRFSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLAS 155
Query: 153 RWR 155
+ R
Sbjct: 156 KMR 158
>gi|2621176 (AE000802) dolichyl-phosphate mannose synthase
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 42.2 bits (97), Expect = 0.008
Identities = 36/130 (27%), Positives = 58/130 (43%), Gaps = 11/130 (8%)
Query: 40 SDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL 99
++ +E + VVVP YNE +T + + +L + R++ VDDGS D T +I+ +
Sbjct: 5 AEHRQEDVAVVVPVYNEEKT-------VAGVIESLLDRGYRVIAVDDGSRDSTPEILAGI 57
Query: 100 VVNDPRVGGIKLSRNFGKEIAITAGLD---NTPFGAVLLLDADGQDPPELIPQFVARWRA 156
+ N G A+ GL + ++ DADGQ P+ I +
Sbjct: 58 ASERDGLSVYTHVINRGLGTALRTGLRAAVDEGASCIVTFDADGQHDPDDIEGVIEPLLK 117
Query: 157 G-YDNVYGTR 165
G D V G+R
Sbjct: 118 GEADVVIGSR 127
>gi|4205942 (AF063460) nodulation protein C [Rhizobium sp. USDA
1083] >gi|4205945 (AF063461) nodulation protein C
[Rhizobium sp. USDA 1088]
Length = 187
Score = 42.2 bits (97), Expect = 0.008
Identities = 34/123 (27%), Positives = 56/123 (44%), Gaps = 3/123 (2%)
Query: 34 IAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTW 93
+A P + V+VP++NE + L +A + EL R+ VDDGS +R
Sbjct: 38 VAAEPVETRPLPAVDVIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREA 95
Query: 94 DI-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVA 152
+ + A DPR I L N GK A A + + VL +D+D +++ + +
Sbjct: 96 IVRVRAFYSRDPRFSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLAS 155
Query: 153 RWR 155
+ R
Sbjct: 156 KMR 158
>gi|4205954 (AF063464) nodulation protein C [Rhizobium sp. USDA
1177]
Length = 187
Score = 42.2 bits (97), Expect = 0.008
Identities = 34/123 (27%), Positives = 56/123 (44%), Gaps = 3/123 (2%)
Query: 34 IAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTW 93
+A P + V+VP++NE + L +A + EL R+ VDDGS +R
Sbjct: 38 VAAEPVETRPLPAVDVIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREA 95
Query: 94 DI-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVA 152
+ + A DPR I L N GK A A + + VL +D+D +++ + +
Sbjct: 96 IVRVRAFYSRDPRFSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLAS 155
Query: 153 RWR 155
+ R
Sbjct: 156 KMR 158
>gi|4205927 (AF063455) nodulation protein C [Rhizobium sp. CC2129]
Length = 187
Score = 41.8 bits (96), Expect = 0.010
Identities = 34/123 (27%), Positives = 57/123 (45%), Gaps = 3/123 (2%)
Query: 34 IAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTW 93
++ P + V+VP++NE + L +A + EL R+ VDDGS +R
Sbjct: 38 VSAEPVESRPLPAVDVIVPSFNEDPGILSGCLASIADQDYPGEL--RVYVVDDGSRNREA 95
Query: 94 DI-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVA 152
+ + A DPR I L N GK A A + + VL +D+D +++ + V+
Sbjct: 96 IVRVRAFYSRDPRFSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLVS 155
Query: 153 RWR 155
+ R
Sbjct: 156 KMR 158
>gi|4205930 (AF063456) nodulation protein C [Rhizobium sp. CC2155]
Length = 187
Score = 41.8 bits (96), Expect = 0.010
Identities = 34/123 (27%), Positives = 57/123 (45%), Gaps = 3/123 (2%)
Query: 34 IAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTW 93
++ P + V+VP++NE + L +A + EL R+ VDDGS +R
Sbjct: 38 VSAEPVESRPLPAVDVIVPSFNEDPGILSGCLASIADQDYPGEL--RVYVVDDGSRNREA 95
Query: 94 DI-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVA 152
+ + A DPR I L N GK A A + + VL +D+D +++ + V+
Sbjct: 96 IVRVRAFYSRDPRFSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLVS 155
Query: 153 RWR 155
+ R
Sbjct: 156 KMR 158
>gi|4205933 (AF063457) nodulation protein C [Rhizobium sp. CC2160]
Length = 187
Score = 41.8 bits (96), Expect = 0.010
Identities = 34/123 (27%), Positives = 57/123 (45%), Gaps = 3/123 (2%)
Query: 34 IAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTW 93
++ P + V+VP++NE + L +A + EL R+ VDDGS +R
Sbjct: 38 VSAEPVESRPLPAVDVIVPSFNEDPGILSGCLASIADQDYPGEL--RVYVVDDGSRNREA 95
Query: 94 DI-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVA 152
+ + A DPR I L N GK A A + + VL +D+D +++ + V+
Sbjct: 96 IVRVRAFYSRDPRFSFILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLVS 155
Query: 153 RWR 155
+ R
Sbjct: 156 KMR 158
>gi|5813901|gb|AAD52055.1|AF086783_3 (AF086783) IcaA [Staphylococcus
aureus]
Length = 412
Score = 41.4 bits (95), Expect = 0.013
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 45 ECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDP 104
E +T ++ YNE++T+ ++A E+ + ++DGS+D T ++I + N+
Sbjct: 47 EGITFLLACYNESETIEDTLSNVLALKYEKKEI----IIINDGSSDNTAELIYKIKENND 102
Query: 105 RVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD---GQDPP 144
+ + L N GK A+ G+ + V+ LDAD QD P
Sbjct: 103 FI-FVDLQENRGKANALNQGIKQASYDYVMCLDADTIVDQDAP 144
>gi|462036|sp|P33697|EXOO_RHIME SUCCINOGLYCAN BIOSYNTHESIS PROTEIN
EXOO >gi|538705|pir||C49348 succinoglycan biosynthesis
glycosyltransferase (EC 2.4.1.-) ExoO - Rhizobium
meliloti >gi|393243 (L20758) exoO [Rhizobium meliloti]
Length = 334
Score = 41.4 bits (95), Expect = 0.013
Identities = 33/107 (30%), Positives = 52/107 (47%), Gaps = 6/107 (5%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+T VV AYN A T+ +R + + + ++ VDD S D T ++ A + DPRV
Sbjct: 12 VTFVVAAYNSADTI----VRAIESALAQEGVTVEVVVVDDCSADATPALVAA--IPDPRV 65
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVAR 153
I L RN G A AG+ + +LD+D P+ + + + R
Sbjct: 66 RLIALDRNRGPGGARNAGIGAARGRWIAVLDSDDTVRPDRLRRMIER 112
>gi|541006|pir||S39958 exoO protein - Rhizobium meliloti (strain
2011) >gi|397572|emb|CAA80347| (Z22636) ExoO
[Sinorhizobium meliloti] >gi|742329|prf||2009367D ExoO
protein [Rhizobium meliloti]
Length = 348
Score = 41.4 bits (95), Expect = 0.013
Identities = 33/107 (30%), Positives = 52/107 (47%), Gaps = 6/107 (5%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+T VV AYN A T+ +R + + + ++ VDD S D T ++ A + DPRV
Sbjct: 12 VTFVVAAYNSADTI----VRAIESALAQEGVTVEVVVVDDCSADATPALVAA--IPDPRV 65
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVAR 153
I L RN G A AG+ + +LD+D P+ + + + R
Sbjct: 66 RLIALDRNRGPGGARNAGIGAARGRWIAVLDSDDTVRPDRLRRMIER 112
>gi|2133379|pir||S70643 dolichyl-phosphate-mannose synthase
precursor - Trypanosoma brucei brucei
>gi|1150648|emb|CAA90875| (Z54162)
dolichyl-phosphate-mannose synthase [Trypanosoma brucei
brucei]
Length = 267
Score = 41.4 bits (95), Expect = 0.013
Identities = 35/121 (28%), Positives = 62/121 (50%), Gaps = 4/121 (3%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVA-ALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+++VPAY E L L + A + + + ++ VDD S D + +++E V N+
Sbjct: 6 SIIVPAYKECGNLSHLQAGVDRLADDGFSKNEVEMVIVDDNSRDGSVEVVEK-VRNEGYG 64
Query: 107 GGIKLSRNF-GKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFV-ARWRAGYDNVYGT 164
I++ N G A+ G+ + +L++DAD Q PP+ +P + A + G + V GT
Sbjct: 65 VRIEVRTNDRGLSSAVIHGISVSKGSFILVMDADLQHPPKTVPCLLRALEKPGVEFVCGT 124
Query: 165 R 165
R
Sbjct: 125 R 125
>gi|46292|emb|CAA25811| (X01649) open reading frame (pot. nodC gene)
(aa 1-402) [Sinorhizobium meliloti]
Length = 402
Score = 41.0 bits (94), Expect = 0.017
Identities = 32/108 (29%), Positives = 52/108 (47%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP++NE + L +A + EL R+ VDDGS +R + + A DPR
Sbjct: 29 VIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREAIVRVRAFYSRDPRFS 86
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
I L N GK A A + + VL +D+D +++ + ++ R
Sbjct: 87 FILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMR 134
>gi|72761|pir||ZZZRC4 nodulation protein nodC - Rhizobium meliloti
(strain 41) >gi|46291|emb|CAA25810| (X01649) pot. open
reading frame (pot. nodC' gene) (aa 1-426)
[Sinorhizobium meliloti]
Length = 426
Score = 41.0 bits (94), Expect = 0.017
Identities = 32/108 (29%), Positives = 52/108 (47%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP++NE + L +A + EL R+ VDDGS +R + + A DPR
Sbjct: 53 VIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREAIVRVRAFYSRDPRFS 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
I L N GK A A + + VL +D+D +++ + ++ R
Sbjct: 111 FILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMR 158
>gi|3123077|sp|Q57022|Y868_HAEIN PUTATIVE GLYCOSYL TRANSFERASE
HI0868 >gi|1074166|pir||A64099 glycosyl transferase
(lgtD) homolog - Haemophilus influenzae (strain Rd KW20)
>gi|1573885 (U32768) conserved hypothetical protein
[Haemophilus influenzae Rd]
Length = 250
Score = 41.0 bits (94), Expect = 0.017
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV 101
MN +++++P YN L+ I++ LN + + L+ +DDGS D++ +II ++
Sbjct: 1 MNMPLISIIMPVYNAEC---YLNQGILSCLNQSYQ-NIELILIDDGSTDKSIEIINNIID 56
Query: 102 NDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
D RV N G A GL+ + LD+D
Sbjct: 57 KDKRVKLFFTPTNQGPAAARNIGLEKAQGDYITFLDSD 94
>gi|2496031|sp|Q57964|Y544_METJA HYPOTHETICAL PROTEIN MJ0544
>gi|2127875|pir||H64367 dolichyl-phosphate mannose
synthase - Methanococcus jannaschii >gi|1592295 (U67504)
dolichyl-phosphate mannose synthase [Methanococcus
jannaschii]
Length = 229
Score = 41.0 bits (94), Expect = 0.017
Identities = 36/125 (28%), Positives = 55/125 (43%), Gaps = 13/125 (10%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDP-R 105
+ ++PA+NE + I+ L L +L + VDDGS D T I+E
Sbjct: 1 MIAIIPAFNEEKN-------ILKVLKDLEKLRVDAVVVDDGSKDNTSKIVEEFAKKAKIN 53
Query: 106 VGGIKLSRNFGKEIAITAG----LDNTPFGAVLLLDADGQDPPELIPQFVARWR-AGYDN 160
V I+ +N GK AI G L + ++ +D D Q P IP+ + + D
Sbjct: 54 VYLIRNEKNEGKAKAIEKGTKFALSLNKYKYIIYIDGDYQHKPMDIPKLLKKLEDTNADA 113
Query: 161 VYGTR 165
V+G R
Sbjct: 114 VFGIR 118
>gi|2599110 (AF028810) PssH [Rhizobium leguminosarum bv. viciae]
Length = 322
Score = 41.0 bits (94), Expect = 0.017
Identities = 29/110 (26%), Positives = 55/110 (49%), Gaps = 4/110 (3%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV 101
M++ +T++ YN +TLP + + A+ TLP+ + +++ VD+ S+D T ++ +
Sbjct: 1 MSKVKVTILFSTYNGEKTLPTMLDALCAS--TLPKEEWKIVAVDNNSSDHTVAVLNSYKE 58
Query: 102 NDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFV 151
P + GK+ +T G + V+L D D P+ I QF+
Sbjct: 59 RLPLE--VYFEPKQGKQYTLTLGFRHLEGELVILTDDDVIPAPDWIEQFL 106
>gi|2760917 (AF038577) NodC [Sinorhizobium meliloti]
Length = 402
Score = 41.0 bits (94), Expect = 0.017
Identities = 32/108 (29%), Positives = 52/108 (47%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP++NE + L +A + EL R+ VDDGS +R + + A DPR
Sbjct: 29 VIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREAIVRVRAFYSRDPRFS 86
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
I L N GK A A + + VL +D+D +++ + ++ R
Sbjct: 87 FILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMR 134
>gi|3061293|dbj|BAA25647| (D86202) dolichol-phosphate-mannose
synthase [Homo sapiens]
Length = 120
Score = 41.0 bits (94), Expect = 0.017
Identities = 25/94 (26%), Positives = 48/94 (50%), Gaps = 3/94 (3%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL--VVNDPR 105
+V++P YNE + LPL+ +V + + ++ ++ +DDGS D T D+ E L + R
Sbjct: 28 SVLLPTYNERENLPLIVWLLVKSFSE-SGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDR 86
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
+ + G A G+ + ++++DAD
Sbjct: 87 ILLRPREKKLGLGTAYIHGMKHATGNYIIIMDAD 120
>gi|3256859|dbj|BAA29542| (AP000002) 314aa long hypothetical protein
[Pyrococcus horikoshii]
Length = 314
Score = 41.0 bits (94), Expect = 0.017
Identities = 29/108 (26%), Positives = 52/108 (47%), Gaps = 7/108 (6%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+++++PAYNE + + R + A + ++ VDDGS D T++ A + D R+
Sbjct: 1 MSIIIPAYNEEENIK----RAIKAALSQDYPVSEVIVVDDGSEDGTYE--RAKEIKDHRL 54
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARW 154
+K+ GK AI GL ++ DAD + + + V R+
Sbjct: 55 KVLKIDHR-GKAGAINEGLKIAKGSVIVTTDADSFMSKDAVRRLVERF 101
>gi|4205936 (AF063458) nodulation protein C [Rhizobium sp. WSM870]
Length = 187
Score = 41.0 bits (94), Expect = 0.017
Identities = 32/108 (29%), Positives = 52/108 (47%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP++NE + L +A + EL R+ VDDGS +R + + A DPR
Sbjct: 53 VIVPSFNEDPGILSACLASIADQDYRGEL--RVYVVDDGSRNREAILRVRAFYSRDPRFS 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
I L N GK A A + + VL +D+D +++ + ++ R
Sbjct: 111 FILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMR 158
>gi|4205948 (AF063462) nodulation protein C [Rhizobium sp. USDA
1114]
Length = 187
Score = 41.0 bits (94), Expect = 0.017
Identities = 32/108 (29%), Positives = 52/108 (47%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP++NE + L +A + EL R+ VDDGS +R + + A DPR
Sbjct: 53 VIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREAIVRVRAFYSRDPRFS 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
I L N GK A A + + VL +D+D +++ + ++ R
Sbjct: 111 FILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMR 158
>gi|4205951 (AF063463) nodulation protein C [Rhizobium sp. USDA
1115]
Length = 187
Score = 41.0 bits (94), Expect = 0.017
Identities = 32/108 (29%), Positives = 52/108 (47%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP++NE + L +A + EL R+ VDDGS +R + + A DPR
Sbjct: 53 VIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREAIVRVRAFYSRDPRFS 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
I L N GK A A + + VL +D+D +++ + ++ R
Sbjct: 111 FILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMR 158
>gi|4205957 (AF063465) nodulation protein C [Rhizobium sp. USDA
1944]
Length = 187
Score = 41.0 bits (94), Expect = 0.017
Identities = 32/108 (29%), Positives = 52/108 (47%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP++NE + L +A + EL R+ VDDGS +R + + A DPR
Sbjct: 53 VIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREAIVRVRAFYSRDPRFS 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
I L N GK A A + + VL +D+D +++ + ++ R
Sbjct: 111 FILLPENVGKRKAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMR 158
>gi|262672|bbs|121657 NodC=polysaccharide polymerizing enzyme
homolog [Rhizobium meliloti, Peptide, 424 aa]
Length = 424
Score = 40.2 bits (92), Expect = 0.030
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 1 MLDLDTLNPVTLIRLEGKPGRSISPSPAVADG-RIAPVPYSDMNRECLTVVVPAYNEAQT 59
+LD + +++ L RS+ DG +A P + V+VP++NE
Sbjct: 3 LLDTTSTAAISIYALLLTAYRSMQVLARPIDGPAVAAEPVETRPLPAVDVIVPSFNEPPG 62
Query: 60 LPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVGGIKLSRNFGKE 118
+ L +A + EL R+ VDDGS +R + + A DPR I L N GK
Sbjct: 63 ILSACLASIAQ-DYPGEL--RVYVVDDGSRNREAIVRVRAFYSRDPRFSFILLPENVGKR 119
Query: 119 IAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
A A + + VL +D+D +++ + ++ R
Sbjct: 120 KAQIAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMR 156
>gi|4205918 (AF063452) nodulation protein C [Rhizobium sp. USDA
1953]
Length = 188
Score = 40.2 bits (92), Expect = 0.030
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 35 APVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWD 94
AP+P D V+VP++NE + L +A + EL R+ VDDGS +R
Sbjct: 47 APLPAVD-------VIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREAI 97
Query: 95 I-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVAR 153
+ + DPR I L N GK A A + + VL +D+D +++ + V++
Sbjct: 98 VRVHDFYSRDPRFTFILLPENVGKRKAQIAAIGQSSGELVLNVDSDSTIAFDVVSKLVSK 157
Query: 154 WR 155
R
Sbjct: 158 MR 159
>gi|4206044 (AF063494) nodulation protein C [Rhizobium sp. CIAM1115]
Length = 187
Score = 40.2 bits (92), Expect = 0.030
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 22 SISPSPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRL 81
+IS +PA D PVP D V+VP +NE + L +A + +L R+
Sbjct: 34 TISTTPA-KDINATPVPSVD-------VIVPCFNEDPIVLSECLASLAEQDYAGKL--RI 83
Query: 82 LYVDDGSNDRTWDIIE-ALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG 140
VDDGS +R + + A+ +D R L +N GK A A + + +L +D+D
Sbjct: 84 YVVDDGSKNRDAVVAQRAVYADDERFKFTILPKNVGKRKAQIAAITQSSGDLILNVDSDT 143
Query: 141 QDPPELIPQFVARWR 155
P+++ + + R
Sbjct: 144 TIAPDVVSKLAHKMR 158
>gi|2444448 (AF020678) N-acetylglucosaminyltransferase
[Bradyrhizobium sp.]
Length = 171
Score = 39.9 bits (91), Expect = 0.039
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 18 KPGRSISPSPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPEL 77
K +++ PA + S++ + V+VP +NE L +A +
Sbjct: 23 KSAQALYAQPANTSSLQTDMGQSEVALPSVDVIVPCFNEDPNTLSKCLESIAG----QDY 78
Query: 78 DGRL--LYVDDGSNDRTWDII---EALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGA 132
GRL VDDGS +R D++ L NDPR I L++N GK A A + ++
Sbjct: 79 GGRLQVYVVDDGSANR--DVVGPVHDLYANDPRFSIILLAKNVGKRKAQIAVIRSSSGNL 136
Query: 133 VLLLDAD 139
VL +D+D
Sbjct: 137 VLNVDSD 143
>gi|3108339 (AF061245) glucosyl transferase ExoO [Sinorhizobium
fredii]
Length = 319
Score = 39.9 bits (91), Expect = 0.039
Identities = 37/117 (31%), Positives = 52/117 (43%), Gaps = 6/117 (5%)
Query: 40 SDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL 99
S N +T VV AYN A T+ R V + + ++ VDD S+D T ++ A+
Sbjct: 10 SPANEPDVTFVVAAYNAADTIT----RAVGSALAQEGVTVEVVVVDDCSSDATAALVTAI 65
Query: 100 VVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRA 156
V PRV I L RN G A AG + +LD+D P + + R A
Sbjct: 66 DV--PRVRLIGLERNRGPGGARNAGFGAARGRWIAVLDSDDTVRPGRLARMTGRAEA 120
>gi|6325029|ref|NP_015097.1|ALG5| UDP-glucose:dolichyl-phosphate
glucosyltransferase; Alg5p
>gi|728823|sp|P40350|ALG5_YEAST DOLICHYL-PHOSPHATE
BETA-GLUCOSYLTRANSFERASE >gi|1077101|pir||S48136
dolichyl-phosphate beta-glucosyltransferase (EC
2.4.1.117) - yeast (Saccharomyces cerevisiae)
>gi|535141|emb|CAA54680| (X77573) dolichyl-phosphate
beta-glucosyltransferase [Saccharomyces cerevisiae]
>gi|1181261|emb|CAA64260| (X94561) dolichyl-phosphate
beta-glucosyltransferase [Saccharomyces cerevisiae]
>gi|1370470|emb|CAA97942| (Z73583) ORF YPL227c
[Saccharomyces cerevisiae]
Length = 334
Score = 39.5 bits (90), Expect = 0.051
Identities = 34/102 (33%), Positives = 49/102 (47%), Gaps = 11/102 (10%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDG---RLLYVDDGSNDRTWDII-----EA 98
L+VV+P+YNE + L+ + A++ L E G ++ VDDGS D T E
Sbjct: 75 LSVVIPSYNETGRILLM---LTDAISFLKEKYGSRWEIVIVDDGSTDNTTQYCLKICKEQ 131
Query: 99 LVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG 140
+N + IK S+N GK A+ G + L DADG
Sbjct: 132 FKLNYEQFRIIKFSQNRGKGGAVRQGFLHIRGKYGLFADADG 173
>gi|3435171 (AF061251) putative glycosyl transferase WbdN
[Escherichia coli]
Length = 260
Score = 39.5 bits (90), Expect = 0.051
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV 101
MN+E +++++P YN A+T+ + V ++ D L +DD S D T+ +I +
Sbjct: 1 MNKETVSIIMPVYNGAKTI----ISSVESIIHQSYQDFVLYIIDDCSTDDTFSLINSRYK 56
Query: 102 NDPRVG--------GIKLSRNFGKEIA 120
N+ ++ G+ SRN+G E+A
Sbjct: 57 NNQKIRILRNKTNLGVAESRNYGIEMA 83
>gi|4867915|dbj|BAA77724.1| (AB008676) glycosyl transferase
[Escherichia coli]
Length = 260
Score = 39.5 bits (90), Expect = 0.051
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVV 101
MN+E +++++P YN A+T+ + V ++ D L +DD S D T+ +I +
Sbjct: 1 MNKETVSIIMPVYNGAKTI----ISSVESIIHQSYQDFVLYIIDDCSTDDTFSLINSRYK 56
Query: 102 NDPRVG--------GIKLSRNFGKEIA 120
N+ ++ G+ SRN+G E+A
Sbjct: 57 NNQKIRILRNKTNLGVAESRNYGIEMA 83
>gi|1054574|dbj|BAA12837| (D85613) 44.8KD hypothetical protein
[Escherichia coli]
Length = 399
Score = 39.1 bits (89), Expect = 0.067
Identities = 45/151 (29%), Positives = 64/151 (41%), Gaps = 21/151 (13%)
Query: 46 CLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDG--RLLYVDDGSNDRTWDIIEALVVND 103
C+ ++PAYNE L +L+ L R++ V+DGS D T EA++
Sbjct: 31 CIDAIIPAYNEGPCL-------AQSLDNLLRNPYFCRVICVNDGSTDNT----EAVMAEV 79
Query: 104 PRVGGIKL----SRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPEL--IPQFVARWRAG 157
R G + +N GK A+ GL+ V L DAD PP+ + +A G
Sbjct: 80 KRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERG 139
Query: 158 YDNVYG--TRLERQGEGLVKRFLAASFYRMI 186
D V G L +G GL+ A MI
Sbjct: 140 ADAVGGHSPLLALKGAGLLPHIRATVKLPMI 170
>gi|4205969 (AF063469) nodulation protein C [Rhizobium sp. CIAM1146]
Length = 187
Score = 39.1 bits (89), Expect = 0.067
Identities = 30/114 (26%), Positives = 55/114 (47%), Gaps = 11/114 (9%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDG----RLLYVDDGSNDRTWDI-IEALVV 101
+ ++VP +NE + + A L +L D R+ VDDGS++R + + L
Sbjct: 51 VVIIVPCFNEDPAI------LSACLASLAGQDYGGKFRVYIVDDGSSNREAILPVHGLYT 104
Query: 102 NDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
+DPR + L +N GK A A ++ + +L +D+D +++ V + R
Sbjct: 105 SDPRFEFLLLPKNVGKRKAQIAAIERSCGDLILNVDSDTSIASDVVTLLVEKMR 158
>gi|4205972 (AF063470) nodulation protein C [Rhizobium sp. CIAM490]
Length = 187
Score = 39.1 bits (89), Expect = 0.067
Identities = 30/112 (26%), Positives = 54/112 (47%), Gaps = 11/112 (9%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDG----RLLYVDDGSNDRTWDI-IEALVVND 103
++VP +NE + + A L +L D R+ VDDGS++R + + L +D
Sbjct: 53 IIVPCFNEDPAI------LSACLXSLAGQDYGGKFRVYIVDDGSSNREAILPVHGLYTSD 106
Query: 104 PRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
PR + L +N GK A A ++ + +L +D+D +++ V + R
Sbjct: 107 PRFEFLLLPKNVGKRKAQIAAIERSCGDLILNVDSDTSIASDVVTLLVEKMR 158
>gi|4206050 (AF063496) nodulation protein C [Rhizobium sp. USDA
2370]
Length = 187
Score = 39.1 bits (89), Expect = 0.067
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 22 SISPSPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRL 81
+IS +PA D PVP D V+VP +NE + L +A + + +L R+
Sbjct: 34 TISTTPA-KDIESTPVPSVD-------VIVPCFNEDPIVLSECLASLAEQDYVGKL--RI 83
Query: 82 LYVDDGSNDRTWDIIE-ALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG 140
VDDGS +R + + A+ +D R L +N GK A A + +L +D+D
Sbjct: 84 YVVDDGSKNRDAVVAQRAVYADDERFNFTILPKNVGKRKAQIAAITQPSGDLILNVDSDT 143
Query: 141 QDPPELI 147
P+++
Sbjct: 144 TIAPDVV 150
>gi|2621387 (AE000818) mannosyltransferase [Methanobacterium
thermoautotrophicum]
Length = 221
Score = 38.7 bits (88), Expect = 0.087
Identities = 39/132 (29%), Positives = 61/132 (45%), Gaps = 13/132 (9%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+T ++PAYNE +++ L RI D ++ VD+ S+DRT +I + V
Sbjct: 1 MTFLIPAYNEEKSIGPLIDRIKMLCP-----DSEIIVVDNNSSDRTSEIATSRGVR---- 51
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRA-GYDNVYGTR 165
+ GK A+ A NT +++DAD P+ V +A G D V G+R
Sbjct: 52 --VIFEGKQGKANAMVAAFRNTRTEYAVMMDADLTYLPDDSRVLVEVLKAEGADVVLGSR 109
Query: 166 LERQGE-GLVKR 176
L + E G + R
Sbjct: 110 LNGEKEDGAISR 121
>gi|4205963 (AF063467) nodulation protein C [Rhizobium sp. CIAM1141]
>gi|4205966 (AF063468) nodulation protein C [Rhizobium
sp. CIAM1143]
Length = 187
Score = 38.7 bits (88), Expect = 0.087
Identities = 30/112 (26%), Positives = 54/112 (47%), Gaps = 11/112 (9%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDG----RLLYVDDGSNDRTWDI-IEALVVND 103
++VP +NE + + A L +L D R+ VDDGS++R + + L +D
Sbjct: 53 IIVPCFNEDPAI------LSACLASLAGQDYGGKFRVYIVDDGSSNREAILPVHGLYTSD 106
Query: 104 PRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
PR + L +N GK A A ++ + +L +D+D +++ V + R
Sbjct: 107 PRFEFLLLPKNVGKRKAQIAAIERSCGDLILNVDSDTSIASDVVTLLVEKMR 158
>gi|6458811|gb|AAF10652.1|AE001958_6 (AE001958) rfbJ
protein/conserved hypothetical protein [Deinococcus
radiodurans]
Length = 219
Score = 38.7 bits (88), Expect = 0.087
Identities = 32/95 (33%), Positives = 46/95 (47%), Gaps = 12/95 (12%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+ VV+PA+NE +T+ + + AAL PE ++ DGS D T A V
Sbjct: 12 VAVVIPAFNEEETVGDV---VRAALTLTPE----VVVASDGSADAT-----AQVARTAGA 59
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQ 141
++L N GK A+ A L T V++LD D Q
Sbjct: 60 RVVELLENAGKGPALAAALQATDAEYVVMLDGDLQ 94
>gi|6460566|gb|AAF12272.1|AE001862_98 (AE001862) glycosyltransferase
[Deinococcus radiodurans]
Length = 328
Score = 38.7 bits (88), Expect = 0.087
Identities = 38/123 (30%), Positives = 58/123 (46%), Gaps = 10/123 (8%)
Query: 43 NRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVN 102
+R VV+ YN A+ L+ +I + L+ L DG LL DDGS+D + I+E+
Sbjct: 4 SRPTYQVVMATYNGAR---YLNSQISSILSQLE--DGELLIHDDGSSDDSVAILESWSKV 58
Query: 103 DPRVGGIKLSR--NFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDN 160
D RV I + K + L + P+ VL D D P + ++ W Y++
Sbjct: 59 DSRVKLIYAPHCGSAAKNFSYLLSLTDAPY--VLCADQDDVWPAGRLRTLIS-WACFYES 115
Query: 161 VYG 163
VYG
Sbjct: 116 VYG 118
>gi|1709318|sp|P50356|NODC_RHIGA N-ACETYLGLUCOSAMINYLTRANSFERASE
(NODULATION PROTEIN C) >gi|1001914|emb|CAA60879|
(X87578) nodC [Rhizobium galegae]
Length = 433
Score = 38.3 bits (87), Expect = 0.11
Identities = 29/108 (26%), Positives = 53/108 (48%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
++VP +NE + L +A + +L R+ VDDGS +R + + +DPR
Sbjct: 53 IIVPCFNEDPAILSACLSSLAGQDYGGKL--RIYMVDDGSCNREAILPVHDFYTSDPRFE 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
+ LS+N GK A A ++ + +L +D+D +++ V + R
Sbjct: 111 FLLLSKNVGKRKAQIAAIERSCGDLILNVDSDTSIASDVVTLLVEKMR 158
>gi|1709319|sp|P04678|NODC_RHILT N-ACETYLGLUCOSAMINYLTRANSFERASE
(NODULATION PROTEIN C)
Length = 182
Score = 38.3 bits (87), Expect = 0.11
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALV-VNDPRVG 107
++VP++NE+ P+ I + P + R+ DDGS +R + E L D R
Sbjct: 53 IIVPSFNESPARPVRLPGIPCQPRSYPGML-RVYVADDGSRNRDAVVAEQLAYAGDARFE 111
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
I L RN GK A A + + +L +D+D
Sbjct: 112 FIMLPRNVGKRKAQIAAISRSSGDLILNVDSD 143
>gi|2105063|emb|CAB08827| (Z95436) hypothetical protein Rv3631
[Mycobacterium tuberculosis]
Length = 241
Score = 38.3 bits (87), Expect = 0.11
Identities = 42/128 (32%), Positives = 58/128 (44%), Gaps = 23/128 (17%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRVGG 108
VV+PA+NEA + ++V + ++ + ++ VDDGS D T DI R G
Sbjct: 16 VVIPAFNEAAVIG----KVVTDVRSVFD---HVVCVDDGSTDGTGDI--------ARRSG 60
Query: 109 IKLSR---NFGKEIAITAGLD---NTPFGAVL-LLDADGQDPPELIPQFVARWRAG-YDN 160
L R N G+ AI G++ P V D DGQ + + V R AG D
Sbjct: 61 AHLVRHPINLGQGAAIQTGIEYARKQPGAQVFATFDGDGQHRVKDVAAMVDRLGAGDVDV 120
Query: 161 VYGTRLER 168
V GTR R
Sbjct: 121 VIGTRFGR 128
>gi|2865458 (AF039956) glycosyl transferase [Sinorhizobium fredii]
Length = 354
Score = 38.3 bits (87), Expect = 0.11
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 39 YSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEA 98
+S +R +++++ YN AQ + R + + + ++ VDD S D + ++I +
Sbjct: 2 HSTQDRLPVSIIIANYNYAQFVS----RAIDSALAQSYGNVEVIVVDDASTDHSAEVIAS 57
Query: 99 LVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARW 154
PR+ N G A G + VL LDAD P + + VA+W
Sbjct: 58 Y---GPRIKPCMKKANGGHGAAFNTGFAASRGAIVLFLDADDYLYPNAVSEIVAQW 110
>gi|4205924 (AF063454) nodulation protein C [Rhizobium sp. USDA
1970]
Length = 187
Score = 38.3 bits (87), Expect = 0.11
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALV------VN 102
V+VP++NE + L +A + EL R+ VDDGS +R EA+V
Sbjct: 53 VIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNR-----EAIVRAHDSYSR 105
Query: 103 DPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
DPR I L N GK A A + + VL +D+D +++ + ++ R
Sbjct: 106 DPRFSFILLPENVGKRKAQVAAIGQSSGDLVLNVDSDSTIAFDVVSKLASKMR 158
>gi|4205975 (AF063471) nodulation protein C [Rhizobium sp. CIAM540]
Length = 187
Score = 38.3 bits (87), Expect = 0.11
Identities = 29/108 (26%), Positives = 53/108 (48%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
++VP +NE + L +A + +L R+ VDDGS +R + + +DPR
Sbjct: 53 IIVPCFNEDPAILSACLSSLAGQDYGGKL--RIYMVDDGSCNREAILPVHDFYTSDPRFE 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
+ LS+N GK A A ++ + +L +D+D +++ V + R
Sbjct: 111 FLLLSKNVGKRKAQIAAIERSCGDLILNVDSDTSIASDVVTLLVEKMR 158
>gi|420905|pir||S34305 nodulation protein nodC - Rhizobium sp
>gi|312350|emb|CAA51774| (X73362) nodC [Rhizobium sp.]
Length = 413
Score = 37.9 bits (86), Expect = 0.15
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP YNE L +A + EL R+ VDDGS +R I + DPR
Sbjct: 53 VIVPCYNEDPRALSACLASIAKQDYAGEL--RVYVVDDGSGNRNAIIPVHDHYACDPRFR 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVAR 153
I + +N GK A + + VL +D+D P+++ + +
Sbjct: 111 FILMPKNVGKRKAEIVAIRESSGDLVLNVDSDTTIAPDVVTKLALK 156
>gi|1652021|dbj|BAA16947| (D90901) hypothetical protein
[Synechocystis sp.]
Length = 294
Score = 37.9 bits (86), Expect = 0.15
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRT 92
L+V++P YNE QT+ + +I +PE+ ++ VDDGS D T
Sbjct: 24 LSVIIPIYNEIQTIEKILKKIT---TVMPEIPKEIVMVDDGSKDGT 66
>gi|2495523|sp|Q47536|YAIP_ECOLI HYPOTHETICAL 44.7 KD PROTEIN IN
ADHC-TAUA INTERGENIC REGION >gi|1657558|gb|AAB18086.1|
(U73857) 44.8 kD hypothetical protein [Escherichia coli]
>gi|1786560 (AE000143) polysaccharide metabolism
[Escherichia coli]
Length = 398
Score = 37.9 bits (86), Expect = 0.15
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 46 CLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDG--RLLYVDDGSNDRTWDIIEALVVND 103
C+ ++PAYNE L +L+ L R++ V+DGS D T EA++
Sbjct: 31 CIDAIIPAYNEGPCL-------AQSLDNLLRNPYFCRVICVNDGSTDNT----EAVMAEV 79
Query: 104 PRVGGIKL----SRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPE 145
R G + +N GK A+ GL+ V L DAD PP+
Sbjct: 80 KRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADTYVPPD 125
>gi|2507081|sp|P50357|NODC_RHISN N-ACETYLGLUCOSAMINYLTRANSFERASE
(NODULATION PROTEIN C) >gi|2182425 (AE000076) NodC
[Rhizobium sp. NGR234]
Length = 413
Score = 37.9 bits (86), Expect = 0.15
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP YNE L +A + EL R+ VDDGS +R I + DPR
Sbjct: 53 VIVPCYNEDPRALSACLASIAKQDYAGEL--RVYVVDDGSGNRNAIIPVHDHYACDPRFR 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVAR 153
I + +N GK A + + VL +D+D P+++ + +
Sbjct: 111 FILMPKNVGKRKAQIVAIRESSGDLVLNVDSDTTIAPDVVTKLALK 156
>gi|4205921 (AF063453) nodulation protein C [Rhizobium sp. USDA
1955]
Length = 187
Score = 37.9 bits (86), Expect = 0.15
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP++NE + L +A + EL R+ VDDGS +R + A DPR
Sbjct: 53 VIVPSFNEDPGILSACLASIADQDYPGEL--RVYVVDDGSRNREAIVRARAFYSRDPRFS 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
I L N GK A A + + VL +D+D
Sbjct: 111 FILLPENVGKRKAQIAAIGQSSGDLVLNVDSD 142
>gi|4205960 (AF063466) nodulation protein C [Rhizobium sp. USDA
3394]
Length = 187
Score = 37.9 bits (86), Expect = 0.15
Identities = 28/108 (25%), Positives = 53/108 (48%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
++VP +NE + L +A ++ R+ VDDGS++R + + L +DPR
Sbjct: 53 IIVPCFNEDPAILSACLASLAGQXYGGKV--RVYIVDDGSSNREAILPVHGLYTSDPRFE 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
+ L +N GK A A ++ + +L +D+D +++ V + R
Sbjct: 111 FLLLPKNVGKRKAQIAAIERSCGDLILNVDSDTSIASDVVTLLVEKMR 158
>gi|1709317|sp|P53417|NODC_BRAEL N-ACETYLGLUCOSAMINYLTRANSFERASE
(NODULATION PROTEIN C)
Length = 182
Score = 37.5 bits (85), Expect = 0.20
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTW-DIIEALVVNDPRVG 107
V+VP +NE L +A+ + +L R++ VDDGS +R + + +DPR
Sbjct: 54 VIVPCFNEDPNTLSECLASIASQDYAGKL--RVIVVDDGSANRDLLGPVHKIYASDPRFR 111
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVAR 153
I +++N GK A A + ++ VL +D+D +++ + V++
Sbjct: 112 IILMAKNVGKRKAQIAAIRSSSGDLVLNVDSDTILAVDVVTKLVSK 157
>gi|3413448|emb|CAA72353| (Y11648) wlaD [Campylobacter jejuni]
Length = 309
Score = 37.5 bits (85), Expect = 0.20
Identities = 33/133 (24%), Positives = 58/133 (42%), Gaps = 7/133 (5%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
L+V+VP +N L + + ++ D ++ DD S+D T +++ L +D R+
Sbjct: 4 LSVIVPTFNRQVLLE----KAIKSIQNQDFKDLEIIVSDDNSSDDTKSVVQNLQKDDDRI 59
Query: 107 GGIKLSRNF--GKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGT 164
L++N+ G GLD V LD D + + + + GY +V+G
Sbjct: 60 KYF-LNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALSTLMQKANEGYAHVFGN 118
Query: 165 RLERQGEGLVKRF 177
L + L K F
Sbjct: 119 CLIEKEGNLSKEF 131
>gi|6968562|emb|CAB73383.1| (AL139077) putative glycosyltransferase
[Campylobacter jejuni]
Length = 309
Score = 37.5 bits (85), Expect = 0.20
Identities = 33/133 (24%), Positives = 58/133 (42%), Gaps = 7/133 (5%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
L+V+VP +N L + + ++ D ++ DD S+D T +++ L +D R+
Sbjct: 4 LSVIVPTFNRQVLLE----KAIKSIQNQDFKDLEIIVSDDNSSDDTKSVVQNLQKDDDRI 59
Query: 107 GGIKLSRNF--GKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGT 164
L++N+ G GLD V LD D + + + + GY +V+G
Sbjct: 60 KYF-LNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALSTLMQKANEGYAHVFGN 118
Query: 165 RLERQGEGLVKRF 177
L + L K F
Sbjct: 119 CLIEKEGNLSKEF 131
>gi|128442|sp|P17862|NODC_RHILO N-ACETYLGLUCOSAMINYLTRANSFERASE
(NODULATION PROTEIN C) >gi|95169|pir||S12793 nodulation
protein nodC - Rhizobium loti >gi|46228|emb|CAA37131|
(X52958) nodC (AA 1-424) [Mesorhizobium loti]
Length = 424
Score = 37.1 bits (84), Expect = 0.26
Identities = 30/106 (28%), Positives = 53/106 (49%), Gaps = 3/106 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V++P+YNEA L +A+ +L ++ VDDGS +R + ++ +DPR
Sbjct: 53 VIIPSYNEAPRTLSDCLASIASQEYAGKL--QVYVVDDGSANRDALVGVQEEYGHDPRFN 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVAR 153
I L +N GK A A + + VL +D+D P+++ + +
Sbjct: 111 FIALPKNVGKRKAQIAAVRRSCGDLVLNVDSDTILAPDVVTRLALK 156
>gi|4205981 (AF063473) nodulation protein C [Rhizobium sp. USDA
3353]
Length = 187
Score = 37.1 bits (84), Expect = 0.26
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 28 AVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRL--LYVD 85
+V+D ++ P+ ++ V+VP YNE P + +++T E GRL VD
Sbjct: 37 SVSDDIVSSDPWPSVD-----VIVPCYNED---PRTLFACLTSIST-QEYAGRLRVYVVD 87
Query: 86 DGSNDRTWDI-IEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
DGS +R + DPR I L +N GK A A + ++ VL +D+D
Sbjct: 88 DGSGNRDAVAPVHQSFARDPRFNFILLPKNAGKRKAQIAAIRHSSGALVLNVDSD 142
>gi|5457504|emb|CAB48995.1| (AJ248283) hypothetical protein
[Pyrococcus abyssi]
Length = 253
Score = 37.1 bits (84), Expect = 0.26
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 257 NFALEGITSFSTAPLRVTTYLGLITAVFAFGYGVWIVLKALILGDRVPGWPTMMTVILLL 316
+F + I S ST P ++ F YG WIV+K LI+ ++ P M+ + LL
Sbjct: 117 DFPVGRIESLSTQPRYEEEHIN-----FTVKYGKWIVVKRLIIDEKTP----MLDIARLL 167
Query: 317 GGVQLIALGLIGEYLG 332
+ A+G I E+ G
Sbjct: 168 ASINESAVGKIPEFAG 183
>gi|1653137|dbj|BAA18053| (D90911) spore coat polysaccharide
biosynthesis protein SpsA [Synechocystis sp.]
Length = 276
Score = 36.7 bits (83), Expect = 0.34
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
++V++ YN Q + + + ++ + + L+ VDDGS D + D+I + D R+
Sbjct: 11 ISVIITNYNYDQFID----QAIESVLSQTYYNFELIIVDDGSTDNSRDVISS--YTDSRI 64
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARW 154
+ + N G+ A AG + + LD+D PE + + + RW
Sbjct: 65 KAL-VKNNGGQASAFNAGFEQANGEIICFLDSDDWWKPEKL-ETIIRW 110
>gi|1944170|dbj|BAA19644| (AB002668) unnamed protein product
[Actinobacillus actinomycetemcomitans]
Length = 234
Score = 36.7 bits (83), Expect = 0.34
Identities = 31/137 (22%), Positives = 57/137 (40%), Gaps = 14/137 (10%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+ +++P YNE++++ + ++ L PE D + ++D D T I+ N
Sbjct: 3 ILLIIPCYNESESI----ISLLDELKDYPEYD--YIVINDCFKDNTSKIVRNYGANV--- 53
Query: 107 GGIKLSRNFGKEIAITAGL---DNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYG 163
I L N G + G+ + + +D DGQ P I + V + + G D
Sbjct: 54 --IDLPINLGLSGGVQTGMMYATKNDYDICIQIDGDGQHMPSEIYKLVDKIKDGVDIAIS 111
Query: 164 TRLERQGEGLVKRFLAA 180
+R + + FL A
Sbjct: 112 SRFLESKDSYSQTFLRA 128
>gi|2114001|emb|CAB08973| (Z95558) hypothetical protein Rv0539
[Mycobacterium tuberculosis]
Length = 210
Score = 36.7 bits (83), Expect = 0.34
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 20/119 (16%)
Query: 50 VVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIE---ALVVNDPRV 106
++P NE ++LP + I A R L VD+ S D T + A VV +PR
Sbjct: 1 MLPCLNEEESLPAVLAAIPAGY--------RALVVDNNSTDDTATVAARHGAQVVVEPRP 52
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTR 165
G +G A+ AG+ V ++DADG +P+ VA G D V G R
Sbjct: 53 G-------YGS--AVHAGVLAATTPIVAVIDADGSMDAGDLPKLVAELDKGADLVTGRR 102
>gi|3127811|emb|CAA04330| (AJ000854) glycosyltransferase
[Campylobacter jejuni]
Length = 309
Score = 36.7 bits (83), Expect = 0.34
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
L+V+VP +N L + + + D ++ DD S+D T +++ L +D R+
Sbjct: 4 LSVIVPTFNRQVLLE----KAIKIIQNQDFKDLEIIVSDDNSSDDTKSVVQNLQKDDDRI 59
Query: 107 GGIKLSRNF--GKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGT 164
L++N+ G GLD V LD D + + + + GY +V+G
Sbjct: 60 KYF-LNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALSTLMQKANEGYAHVFGN 118
Query: 165 RLERQGEGLVKRF 177
L + L K F
Sbjct: 119 CLIEKEGNLSKEF 131
>gi|6458965|gb|AAF10794.1|AE001970_9 (AE001970) glycosyl
transferase-related protein [Deinococcus radiodurans]
Length = 183
Score = 36.7 bits (83), Expect = 0.34
Identities = 45/154 (29%), Positives = 62/154 (40%), Gaps = 26/154 (16%)
Query: 48 TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIE---ALVVNDP 104
+V++PA NEA LP + AL ++ VD+ S D+T I A V++ P
Sbjct: 12 SVIIPARNEAAYLP----GTLRALERQTLAPAEVIVVDNASRDQTAQIARSWGAQVLSCP 67
Query: 105 RVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQF--VARWRAGY---- 158
GG+ +R GLD V DAD P + + A GY
Sbjct: 68 E-GGVARARQL--------GLDTARSSWVATTDADSLPAPGWLAAYAQAALLAGGYPEVE 118
Query: 159 ---DNVYGTRLERQGE-GLVKRFLAASFYRMIGR 188
D + G L R GE G V R L + R + R
Sbjct: 119 AYEDVILGQNLARLGEIGYVPRALVETSARRLDR 152
>gi|3043923 (AF036004) hyaluronan synthase [Pasteurella multocida]
Length = 972
Score = 36.4 bits (82), Expect = 0.44
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 33 RIAPVPYSDMNRECL-TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDR 91
++ P+ S +NR L ++ +PAYN A + R V + +D + +DGS D
Sbjct: 427 KLLPIEDSHINRVPLVSIYIPAYNCANYIQ----RCVDSALNQTVVDLEVCICNDGSTDN 482
Query: 92 TWDIIEALVVNDPRV-------GGIKLSRN 114
T ++I L N+PRV GGI + N
Sbjct: 483 TLEVINKLYGNNPRVRIMSKPNGGIASASN 512
>gi|3435187 (AF067175) glycosyl transferase [Pasteurella multocida]
Length = 864
Score = 36.4 bits (82), Expect = 0.44
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 33 RIAPVPYSDMNRECL-TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDR 91
++ P+ S +NR L ++ +PAYN A + R V + +D + +DGS D
Sbjct: 427 KLLPIEDSHINRVPLVSIYIPAYNCANYIQ----RCVDSALNQTVVDLEVCICNDGSTDN 482
Query: 92 TWDIIEALVVNDPRV-------GGIKLSRN 114
T ++I L N+PRV GGI + N
Sbjct: 483 TLEVINKLYGNNPRVRIMSKPNGGIASASN 512
>gi|1161380 (U43366) IcaA [Staphylococcus epidermidis]
Length = 412
Score = 36.0 bits (81), Expect = 0.58
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 45 ECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDP 104
E ++ ++ YNE++T+ ++++ +L + ++ ++DGS+D T +II N
Sbjct: 47 EGISFLLACYNESETVQ----DTLSSVLSLEYPEKEIIIINDGSSDNTAEIIYDFKKNHD 102
Query: 105 RVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
+ L N GK A+ G+ + V+ LDAD
Sbjct: 103 -FKFVDLEVNRGKANALNEGIKQASYEYVMCLDAD 136
>gi|2496163|sp|Q58619|YC22_METJA HYPOTHETICAL PROTEIN MJ1222
>gi|2128734|pir||E64452 hypothetical protein MJ1222 -
Methanococcus jannaschii >gi|1591853 (U67563)
dolichol-P-glucose synthetase isolog [Methanococcus
jannaschii]
Length = 243
Score = 36.0 bits (81), Expect = 0.58
Identities = 43/144 (29%), Positives = 67/144 (45%), Gaps = 17/144 (11%)
Query: 40 SDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL 99
+++N++ + VVVPA+NE + + N E ++ VDDGS D+T +I +
Sbjct: 12 NEINKDEIFVVVPAFNEEKMIG------ETLKNLKKEGYKNIVVVDDGSMDKTSEIAKKE 65
Query: 100 VVNDPRVGGIKLSRNFGKEI--AITAGLDNTPFGAVLLLDADGQDPPELIPQFVAR-WRA 156
V V L+R G + I L P ++ DADGQ P+ + + V
Sbjct: 66 GV---IVCRHILNRGLGGALGTGIKCALLYKP-KIIITFDADGQHHPKDVEKVVKPVLFE 121
Query: 157 GYDNVYGTRL----ERQGEGLVKR 176
GYD G+R+ E + LVKR
Sbjct: 122 GYDMAIGSRMMDKNELKNMPLVKR 145
>gi|3116140|emb|CAA18889.1| (AL023288) dolichyl-phosphate
beta-glucosyltransferase [Schizosaccharomyces pombe]
Length = 322
Score = 36.0 bits (81), Expect = 0.58
Identities = 48/187 (25%), Positives = 77/187 (40%), Gaps = 24/187 (12%)
Query: 47 LTVVVPAYNEAQTLPLL------HL-RIVAALNTLPELDGRLLYVDDGSNDRTWDII--- 96
+TV+VPAYNE++ + + HL + + ++ + +L VDD S D T + +
Sbjct: 64 ITVIVPAYNESKRIGNMLQETVDHLEKYYRSSSSAGQRRWEILIVDDESKDTTVNAVLEF 123
Query: 97 -EALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG----QDPPELIPQFV 151
L + D + L RN GK A+T G+ + DADG D L
Sbjct: 124 SNKLDLRD-HLRVCSLKRNRGKGGAVTWGMLYARGQYAIFADADGASQFSDLELLFKNMP 182
Query: 152 ARWRAGYDNVYGTRLERQG------EGLVKRFLAASFYRMIGRLSPTPIPTDTGDFRLLS 205
R G V G+R ++ FL F++++ L I F+L S
Sbjct: 183 PGPRGGV--VVGSRAHMVNTAAVVKRSFIRNFLMHCFHKLLQILGIREIGDTQCGFKLFS 240
Query: 206 PRALQAL 212
A Q++
Sbjct: 241 REAYQSI 247
>gi|4206032 (AF063490) nodulation protein C [Rhizobium sp. 2M164]
Length = 187
Score = 36.0 bits (81), Expect = 0.58
Identities = 39/142 (27%), Positives = 64/142 (44%), Gaps = 5/142 (3%)
Query: 1 MLDLDTLNPVTLIRLEGKPGRSISPSPA--VADGRIAPVPYSDMNRECLTVVVPAYNEAQ 58
+L+ ++ V+L L RS+ A + A P + + +VVP++NE
Sbjct: 3 LLETTSIAAVSLYGLLSTAYRSVQVLHARRTLELETAENPDEESTLPSVDIVVPSFNENP 62
Query: 59 TLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALV-VNDPRVGGIKLSRNFGK 117
+ L +A + L L R+ VDDGS + + E +V +D R I L RN GK
Sbjct: 63 RVLSDCLASLANQDYLGVL--RVYVVDDGSRNSDAVVAEQIVYADDARFEFIMLPRNVGK 120
Query: 118 EIAITAGLDNTPFGAVLLLDAD 139
A A + + +L +D+D
Sbjct: 121 RKAQIAAISRSCGDLILNVDSD 142
>gi|140760|sp|P22639|YHET_ANASP HYPOTHETICAL PROTEIN IN HETA
3'REGION >gi|97693|pir||B35391 hypothetical protein
(hetA 3' region) - Anabaena sp. (fragment) >gi|2625136
(AF031959) unknown [Anabaena PCC7120]
Length = 177
Score = 35.6 bits (80), Expect = 0.76
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 35 APVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWD 94
+P+P N ++V++ YN A+ L R + ++ D ++ VDDGS D + D
Sbjct: 41 SPIP----NPMKISVIISNYNYARYLS----RAINSVLAQTHSDIEIVIVDDGSTDNSRD 92
Query: 95 IIEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFV 151
+I L P N G+ A AG V LDAD P + + V
Sbjct: 93 VITQLQEQAPDKIKPIFQANQGQGGAFNAGFAAATGEVVAFLDADDVWKPHKLQRIV 149
>gi|3986517 (AF093220) glucosyltransferase [Mesorhizobium huakuii]
Length = 328
Score = 35.6 bits (80), Expect = 0.76
Identities = 35/141 (24%), Positives = 60/141 (41%), Gaps = 6/141 (4%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRVGG 108
+V+P NEA + L ++ A + L + D GS D T I+E + DPRV
Sbjct: 10 IVIPCLNEAAHIGALLGQLCPARHALAP---GFVVADGGSTDGTLAIVEQIAAKDPRVIL 66
Query: 109 IKLSRNFGKEIAITAGLDNTPFGA--VLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
+ R + AI + GA ++ +DA G P + + + A + +
Sbjct: 67 LHNKRRI-QSAAINLAVGTFGEGAEYLIRIDAHGGYPDDYCDRLLEEALATSADSVVVSM 125
Query: 167 ERQGEGLVKRFLAASFYRMIG 187
G G V++ +AA+ +G
Sbjct: 126 LTSGSGAVQKSVAAAQNSKLG 146
>gi|4206038 (AF063492) nodulation protein C [Rhizobium sp. USDA
2386]
Length = 187
Score = 35.6 bits (80), Expect = 0.76
Identities = 33/114 (28%), Positives = 54/114 (46%), Gaps = 15/114 (13%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELD--GRLLY--VDDGSNDRTWDIIEA---LVV 101
V+VP +NE + + L +L E D G+L + VDDGS +R D +EA
Sbjct: 53 VIVPCFNEDPIV------LSECLASLAEQDYAGKLRFYVVDDGSKNR--DAVEAQRAAYA 104
Query: 102 NDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
+D R L +N GK A A + + +L +D+D P+++ + + R
Sbjct: 105 DDERFKFTILPKNVGKRKAQIAAITQSSGDLILNVDSDTTIAPDVVSKLAHKMR 158
>gi|6940839|gb|AAF31776.1|AF130984_12 (AF130984) putative
glycosyltransferase [Campylobacter jejuni]
>gi|6969993|gb|AAF34148.1| (AF167344)
glycosyltransferase [Campylobacter jejuni]
Length = 270
Score = 35.6 bits (80), Expect = 0.76
Identities = 23/114 (20%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALN-TLPELDGRLLYVDDGSNDRTWDIIEALVVNDPR 105
L++++P +N + + + +N TL +++ +L +DD S D + +++ DPR
Sbjct: 4 LSIIIPLFNSCD---FISRALQSCINQTLKDIE--ILIIDDKSKDNSLNMVLEFAKKDPR 58
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYD 159
+ + N G + G+ ++ ++ LD+D P+ + G+D
Sbjct: 59 IKIFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTPDACEIAFKEMKKGFD 112
>gi|1073728|pir||S51262 trsC protein - Yersinia enterocolitica
>gi|633694|emb|CAA87700| (Z47767) WbcL [Yersinia
enterocolitica]
Length = 292
Score = 35.2 bits (79), Expect = 0.99
Identities = 25/93 (26%), Positives = 41/93 (43%), Gaps = 4/93 (4%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+TV P +N A L +L I+ D L VDDGS D T +++++ + +
Sbjct: 4 VTVFTPTFNRAHVLKRCYLSILEQDRD----DIEWLIVDDGSTDNTAEVVDSFKIENKLN 59
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
N GK+ A ++N + LD+D
Sbjct: 60 IKYIYQDNSGKQAAWNKAVENASGEYFIGLDSD 92
>gi|2145552|pir||S70738 trsC protein - Yersinia enterocolitica
(fragment)
Length = 109
Score = 35.2 bits (79), Expect = 0.99
Identities = 25/93 (26%), Positives = 41/93 (43%), Gaps = 4/93 (4%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+TV P +N A L +L I+ D L VDDGS D T +++++ + +
Sbjct: 4 VTVFTPTFNRAHVLKRCYLSILEQDRD----DIEWLIVDDGSTDNTAEVVDSFKIENKLN 59
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
N GK+ A ++N + LD+D
Sbjct: 60 IKYIYQDNSGKQAAWNKAVENASGEYFIGLDSD 92
>gi|4514312|dbj|BAA75360.1| (AB013364) TuaG [Bacillus halodurans]
Length = 527
Score = 35.2 bits (79), Expect = 0.99
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+TV++PA+N + + ++ + + VDD S D T I+ D RV
Sbjct: 117 VTVIIPAFNAESVIQTS----IESMQKQTWTNLEIFVVDDCSTDETASIVHQYAEQDHRV 172
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
+K N G +A L + V + DAD
Sbjct: 173 HYLKTETNSGAYVARNIALQHATGDFVTINDAD 205
>gi|2454562|gb|AAB94868| (AF015609) unknown [Bacillus subtilis]
>gi|2636081|emb|CAB15572.1| (Z99122) alternate gene
name: yvhG [Bacillus subtilis]
Length = 252
Score = 34.8 bits (78), Expect = 1.3
Identities = 28/102 (27%), Positives = 44/102 (42%), Gaps = 19/102 (18%)
Query: 81 LLYVDDGSNDRTWDIIEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG 140
++ VDD S D T DI++ D R+ + L N G +A L+ V LD+D
Sbjct: 38 MIIVDDCSTDGTRDILQQYEKIDERIHVVYLEENSGAAVARNKALERAQGRYVAFLDSDD 97
Query: 141 QDPPELIPQFVARWRAGYDNVYGTRLERQGEGLVKRFLAASF 182
+W+ +LE+Q E +++R A SF
Sbjct: 98 ------------KWKK-------DKLEKQLEFMMERSCAFSF 120
>gi|3256788|dbj|BAA29471| (AP000002) 321aa long hypothetical protein
[Pyrococcus horikoshii]
Length = 321
Score = 34.8 bits (78), Expect = 1.3
Identities = 22/85 (25%), Positives = 42/85 (48%), Gaps = 16/85 (18%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI----------- 95
++++VP YN +P R++ ++ + L+ VDD SND T+++
Sbjct: 4 VSIIVPVYNTKNYVP----RLLTSIEKQTYTNWELILVDDHSNDGTYELLLEFKDRYPNK 59
Query: 96 IEALVVNDPRVGGIKLSRNFGKEIA 120
+E L PR G + + +N G E++
Sbjct: 60 VEVLKTPKPRSGPM-IGKNMGIEVS 83
>gi|4206041 (AF063493) nodulation protein C [Rhizobium sp. USDA
3620]
Length = 187
Score = 34.8 bits (78), Expect = 1.3
Identities = 29/108 (26%), Positives = 46/108 (41%), Gaps = 3/108 (2%)
Query: 49 VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI-IEALVVNDPRVG 107
V+VP +NE L +A +L R+ +DDGS +R + + DPR
Sbjct: 53 VIVPCFNEDPRALSACLASIAGQQYAGKL--RVYVIDDGSANRDAVVPVHDAYAGDPRFN 110
Query: 108 GIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWR 155
I L N GK A A + + VL +D+D ++ + + R
Sbjct: 111 FILLPENVGKRKAQIAAIRRSSGDLVLNVDSDTTIASNVVTKLALKMR 158
>gi|5458615|emb|CAB50103.1| (AJ248286) glycosyltransferase
[Pyrococcus abyssi]
Length = 233
Score = 34.8 bits (78), Expect = 1.3
Identities = 32/124 (25%), Positives = 56/124 (44%), Gaps = 11/124 (8%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIE---ALVVND 103
+ V++PAYNE +T+ + I ++ + S DRT +I A+V N
Sbjct: 4 VVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYNI 63
Query: 104 PRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYG 163
+ G +++ + + P+ +++LDAD PP+ I V YD V G
Sbjct: 64 AKGGK-------ARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEE-YDVVIG 115
Query: 164 TRLE 167
+RL+
Sbjct: 116 SRLK 119
>gi|5616250|gb|AAD45693.1|AF158628_3 (AF158628) hypothetical protein
[Prochlorococcus PCC9511]
Length = 227
Score = 34.8 bits (78), Expect = 1.3
Identities = 29/134 (21%), Positives = 62/134 (45%), Gaps = 15/134 (11%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDPRV 106
+++++P YNE+Q LPLL + ++ + +L VD S D+T +I ++
Sbjct: 4 ISIIIPTYNESQYLPLLLSDL-----SISNEEAEILIVDCNSEDKTVEI--------GKL 50
Query: 107 GGIKL--SRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGT 164
G K+ S+ + + + G + L AD + + + + + R ++VY
Sbjct: 51 YGSKIHKSKKKNRGLQLNIGAKKATGKWFIFLHADSRLNQDWLKKVKSVMRYDENSVYFF 110
Query: 165 RLERQGEGLVKRFL 178
+ + + ++ RFL
Sbjct: 111 KFKINNKKIIYRFL 124
>gi|5459086|emb|CAB50572.1| (AJ248288) hypothetical protein
[Pyrococcus abyssi]
Length = 447
Score = 34.0 bits (76), Expect = 2.2
Identities = 40/170 (23%), Positives = 72/170 (41%), Gaps = 18/170 (10%)
Query: 32 GRIAPVPYSDMNRECLT----VVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDG 87
G+ P + N E L V++PA+NE + + + V ++ + +++ ++D
Sbjct: 58 GKRYPYDETGFNLEFLEPLVYVLIPAHNEERVI----YKTVRSVLGQDYRNMKVILINDN 113
Query: 88 SNDRTWDIIEALVVNDPR---VGGIKLSRNFGKEIAITAGLD-----NTPFGAVLLLDAD 139
S DRT DI+E + PR + + R K A+ L+ T V +LDAD
Sbjct: 114 STDRTRDIMEEINRKYPRKVVIIDVPPERGRSKPRALNYALEIIEKYMTHPNYVFILDAD 173
Query: 140 GQDPPELIPQFVARWRAGYDNVYGTRLERQGEGLVKRFLA--ASFYRMIG 187
PP + V+ + V G + + K F+ + R++G
Sbjct: 174 YLIPPNALKTLVSIMESAPQYVIGIQGNVRPRNFRKNFVTKFITLERLVG 223
>gi|5739463|gb|AAD50485.1|AF172324_3 (AF172324) WbnA [Escherichia
coli]
Length = 306
Score = 34.0 bits (76), Expect = 2.2
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 42 MNRECL--TVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEAL 99
MN E L +VV+P YN +T+ + ++ + ++ +DDGSND T I+ +
Sbjct: 1 MNNETLDVSVVIPVYNCGKTIK----ETINSILIQTGISFEIIVIDDGSNDETARIVNEI 56
Query: 100 VVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
D R+ N G +A+ G+ + +D D
Sbjct: 57 C--DERIKYF-YQNNSGISVALNNGIKRAAAKYIARIDGD 93
>gi|1405809|emb|CAA67139| (X98514) nodC [Rhizobium tropici]
Length = 452
Score = 33.6 bits (75), Expect = 2.9
Identities = 29/111 (26%), Positives = 50/111 (44%), Gaps = 3/111 (2%)
Query: 38 PYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDR-TWDII 96
P + + V++P++NE L +A +L+ + VDDGS++R +
Sbjct: 42 PIASAQWPSVDVIIPSFNEDPGTLWDCLESIAHEEYAGDLN--VYVVDDGSSNRDAITPV 99
Query: 97 EALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELI 147
DPR I L +N GK A A + + VL +D+D P+++
Sbjct: 100 HTAFARDPRFTFILLRKNVGKRKAQIAAIRRSSGDLVLNVDSDTILAPDVV 150
>gi|4580633|gb|AAD24456.1|AF118389_13 (AF118389) Cps2J
[Streptococcus suis]
Length = 332
Score = 33.6 bits (75), Expect = 2.9
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 45 ECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIEALVVNDP 104
E ++++VP +N + L I++ T E+ L +DDGS+D + DI D
Sbjct: 2 EKVSIIVPIFNTEKYLRECLDSIISQSYTNLEI----LLIDDGSSDSSTDICLEYAEQDG 57
Query: 105 RVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
R+ +L N G A G+ N+ ++ +D+D
Sbjct: 58 RIKLFRLP-NGGVSNARNYGIKNSTANYIMFVDSD 91
>gi|6968580|emb|CAB73401.1| (AL139077) putative glucosyltransferase
[Campylobacter jejuni]
Length = 274
Score = 33.6 bits (75), Expect = 2.9
Identities = 20/94 (21%), Positives = 47/94 (49%), Gaps = 6/94 (6%)
Query: 47 LTVVVPAYNEAQTLPLLHLRIVAALN-TLPELDGRLLYVDDGSNDRTWDIIEALVVNDPR 105
L++++P +N + + + +N TL +++ +L +DD S D + +++ DPR
Sbjct: 4 LSIIIPLFNSCN---FISRALQSCINQTLKDIE--ILIIDDKSKDNSLNMVLEFAKKDPR 58
Query: 106 VGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDAD 139
+ + N G + G+ ++ ++ LD+D
Sbjct: 59 IKIFQNEENLGTFASRNLGVLHSSSDFIMFLDSD 92
>gi|1653339|dbj|BAA18254| (D90912) hypothetical protein
[Synechocystis sp.]
Length = 479
Score = 33.2 bits (74), Expect = 3.8
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 26 SPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGR--LLY 83
+P + G + VPY + CL +V A NE + +IV L +L R +
Sbjct: 94 APPLLTGDASTVPYPQV---CL--MVAAKNEEAVIG----KIVQQLCSLDYPGDRHEVWI 144
Query: 84 VDDGSNDRTWDIIEALVVNDPRVGGIK--LSRNFGKEIAITAGLDNTPFGAVLLLDADGQ 141
VDD S DRT I++ L P++ ++ + GK A+ L T V + DAD
Sbjct: 145 VDDNSTDRTPAILDQLRQQYPQLKVVRRGAGASGGKSGALNEVLAQTQGDIVGVFDADAN 204
Query: 142 DPPELIPQFV 151
P +L+ + V
Sbjct: 205 VPKDLLRRVV 214
>gi|6941975|emb|CAB72409.1| (AL138978) putative AfsR-like regulator
[Streptomyces coelicolor A3(2)]
Length = 761
Score = 33.2 bits (74), Expect = 3.8
Identities = 36/145 (24%), Positives = 62/145 (41%), Gaps = 15/145 (10%)
Query: 53 AYNEAQTLPLL-----HLRIVAALNTLPELDGRLLYVDDGSNDRTWDIIE-ALVVNDPRV 106
A + Q PLL H +V + + LP+L RLL +D+ +++++ AL + DP
Sbjct: 199 ASSAEQVRPLLPGDFRHRVLVTSRDRLPQLGARLLPLDELGTREAYELLDRALRIADPHD 258
Query: 107 GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADGQDPPELIPQFVARWRAGYDNVYGTRL 166
G + +A G + P + DP + + + VA +D RL
Sbjct: 259 GRVGDDPGTTGRLASLCG--HLPLALQIAAALLAADPAKPVSELVAELAEAHD-----RL 311
Query: 167 ERQGEGLVKRFLAASFYRMIGRLSP 191
+ +G +R + A+F RL P
Sbjct: 312 DHLDDG--ERSVRAAFELSYRRLPP 334
>gi|5701991|emb|CAB52224.1| (Z98171) EpsV protein [Streptococcus
thermophilus]
Length = 321
Score = 32.8 bits (73), Expect = 5.0
Identities = 21/82 (25%), Positives = 38/82 (45%), Gaps = 11/82 (13%)
Query: 42 MNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVDDGSNDRTWDI------ 95
M L++++P YN + L +V+ + E+ + +DD S D++W I
Sbjct: 1 MELPLLSIIIPVYNTEEYLTDCLNSLVSQMKQRVEI----ILIDDSSVDKSWSICKKYEK 56
Query: 96 -IEALVVNDPRVGGIKLSRNFG 116
+ + V R G+ +RNFG
Sbjct: 57 KYDYIHVFQQRHSGLSAARNFG 78
>gi|1857121|gb|AAB48386.1| (U65788) glycosyl transferase [Neisseria
meningitidis]
Length = 149
Score = 32.5 bits (72), Expect = 6.6
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 81 LLYVDDGSNDRTWDIIEALVVNDPRVGGIKLSRNFGKEIAITAGLDNTPFGAVLLLDADG 140
+L VDDGS D T I D R+ I RN G ++ GLD +L A
Sbjct: 35 ILIVDDGSTDGTPSIARRFQEQDGRIRIISNPRNLGFMASLNIGLDELVKSGGDILRAPM 94
Query: 141 Q---DPPELIPQFVARWR 155
PP + + ARW+
Sbjct: 95 PTILPPPAGLKKSWARWK 112
>gi|3257163|dbj|BAA29846| (AP000003) 279aa long hypothetical sugar
transport system permease protein [Pyrococcus
horikoshii]
Length = 279
Score = 32.5 bits (72), Expect = 6.6
Identities = 27/85 (31%), Positives = 37/85 (42%), Gaps = 5/85 (5%)
Query: 231 FRQIALPYRREPRLSGGSKFTFWRLWNFALEGITSFSTAPLRVTTYLGLITAVFAFGYGV 290
F IALP + P L + + F WN A G F +P T +GL FAF +
Sbjct: 185 FFYIALPLAK-PALGAVAVYQFLGAWN-AFIGPLIFLRSPENFTLPVGLS---FAFQRSM 239
Query: 291 WIVLKALILGDRVPGWPTMMTVILL 315
W +I G V PT++ + L
Sbjct: 240 WTEYTPIIAGSIVAAAPTILLFVAL 264
>gi|2921555|gb|AAC04822.1| (AF039306) UDP-hexose transferase
[Bradyrhizobium japonicum]
Length = 376
Score = 32.1 bits (71), Expect = 8.6
Identities = 39/135 (28%), Positives = 55/135 (39%), Gaps = 24/135 (17%)
Query: 26 SPAVADGRIAPVPYSDMNRECLTVVVPAYNEAQTLPLLHLRIVAALNTLPELDGRLLYVD 85
S VA P+P ++VV+PA N A + L A + E+ + VD
Sbjct: 13 SARVATQARLPLPVGSTTS--VSVVIPAKNVAAYVGET-LASALAQGEVTEV----IVVD 65
Query: 86 DGSNDRTWDIIEALVVNDPRV-------GGIKLSRNFGKEIAITAGLDNTPFGAVLLLDA 138
DGS D T I+ A + DPR+ G+ +RN G A L L LD
Sbjct: 66 DGSTDNTIAIVRA--IRDPRLRLMTNDSAGVSAARNLGARHASGEWL--------LFLDT 115
Query: 139 DGQDPPELIPQFVAR 153
D + P + +AR
Sbjct: 116 DDRLRPGAVAALLAR 130
Database: nr
Posted date: Feb 20, 2000 12:20 AM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.324 0.144 0.440
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110456737
Number of Sequences: 457798
Number of extensions: 4906211
Number of successful extensions: 9636
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 9517
Number of HSP's gapped (non-prelim): 188
length of query: 378
length of database: 140,871,481
effective HSP length: 50
effective length of query: 328
effective length of database: 117,981,581
effective search space: 38697958568
effective search space used: 38697958568
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (22.0 bits)
S2: 71 (32.1 bits)