BLASTP 2.0.10 [Aug-26-1999]
Query= XF-05E12-GL49
(65 letters)
Database: nr
457,798 sequences; 140,871,481 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|6225361|sp|O34171|FLII_AGRT1 FLAGELLUM-SPECIFIC ATP SYNTHASE... 31 0.97
gi|2190416|emb|CAA73936| (Y13615) protein structure: head-rod-t... 31 0.97
gi|3645984|emb|CAA20887.1| (AL031581) /prediction=(method:""gen... 30 2.2
gi|1109865|gb|AAA83178.1| (U41540) Contains similarity to Pfam ... 30 2.2
gi|6226815|sp|O54249|FLII_RHIME FLAGELLUM-SPECIFIC ATP SYNTHASE... 30 2.2
gi|1709211|sp|P54697|MYSJ_DICDI MYOSIN IJ HEAVY CHAIN >gi|11507... 28 8.4
gi|6960551|gb|AAF33621.1|AF169823_92 (AF169823) ORF92 [Spodopte... 28 8.4
gi|548585|sp|P35875|PPOL_DROME POLY [ADP-RIBOSE] POLYMERASE (PA... 28 8.4
gi|540753|pir||S41186 gene 39 protein - phage SPP1 >gi|439643|e... 28 8.4
gi|1090463|prf||2018369Q G40P protein [Bacteriophage SPP1] 28 8.4
>gi|6225361|sp|O34171|FLII_AGRT1 FLAGELLUM-SPECIFIC ATP SYNTHASE
>gi|2459709|gb|AAB71785.1| (U95165) FliI [Agrobacterium
tumefaciens]
Length = 473
Score = 31.3 bits (69), Expect = 0.97
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 25 TRQAVERFTPVESELLSRLKGLLEDYEEVRD 55
+R A + +TP + +L+SRLK L+ +EE RD
Sbjct: 377 SRLAKKAWTPDQEKLVSRLKALVHRFEETRD 407
>gi|2190416|emb|CAA73936| (Y13615) protein structure: head-rod-tail;
extended discontinuous coiled-coil domain [Halobacterium
salinarum]
Length = 629
Score = 31.3 bits (69), Expect = 0.97
Identities = 15/47 (31%), Positives = 25/47 (52%)
Query: 18 ELVNDLTTRQAVERFTPVESELLSRLKGLLEDYEEVRDALEQDGDAQ 64
EL +++ +A P + ++RL+G L D E RD LE+ D +
Sbjct: 157 ELEDEVAAAEAASADLPAAQQKVTRLQGELRDLNETRDELERKVDEE 203
>gi|3645984|emb|CAA20887.1| (AL031581)
/prediction=(method:""genefinder"", version:""084"",
score:""69.21""); /prediction=(method:""genscan"",
version:""1.0""); /match=(desc:""GH16756.5prime GH
Drosophila melanogaster head pOT2 Drosophila
melanogaster c...
Length = 408
Score = 30.1 bits (66), Expect = 2.2
Identities = 18/53 (33%), Positives = 28/53 (51%), Gaps = 4/53 (7%)
Query: 16 DSELVNDLTTRQAVERFTPVESELLSRLKGLLEDYEEVRDALEQ----DGDAQ 64
D E+ NDLTT + + +E + S+ K ++ EE +DA +Q DG Q
Sbjct: 57 DMEIDNDLTTSERMPTVAELEQPMDSKTKREKKEEEEQKDAQDQKPLEDGSVQ 109
>gi|1109865|gb|AAA83178.1| (U41540) Contains similarity to Pfam
domain: PF00566 (TBC), Score=117.6, E-value=7.8e-32, N=1
[Caenorhabditis elegans]
Length = 1142
Score = 30.1 bits (66), Expect = 2.2
Identities = 11/37 (29%), Positives = 22/37 (58%)
Query: 24 TTRQAVERFTPVESELLSRLKGLLEDYEEVRDALEQD 60
T+ A+ER T ++L K L+ +YE++++ +D
Sbjct: 783 TSANAIERLTRQNMDILEENKNLMREYEQIKEMYRRD 819
>gi|6226815|sp|O54249|FLII_RHIME FLAGELLUM-SPECIFIC ATP SYNTHASE
>gi|2916791|emb|CAA11957| (AJ224445) flagellar export
apparatus protein [Sinorhizobium meliloti]
Length = 467
Score = 30.1 bits (66), Expect = 2.2
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 25 TRQAVERFTPVESELLSRLKGLLEDYEEVRD 55
+R A + +TP + +L++RLK L+ +EE RD
Sbjct: 370 SRLARKAWTPDQEKLVARLKSLIHRFEETRD 400
>gi|1709211|sp|P54697|MYSJ_DICDI MYOSIN IJ HEAVY CHAIN >gi|1150766
(U42409) myosin heavy chain [Dictyostelium discoideum]
Length = 2245
Score = 28.2 bits (61), Expect = 8.4
Identities = 13/43 (30%), Positives = 25/43 (57%)
Query: 18 ELVNDLTTRQAVERFTPVESELLSRLKGLLEDYEEVRDALEQD 60
EL + + Q + T +E + +LKG LE+Y++ + L+Q+
Sbjct: 1243 ELTDHKSKLQIQLQLTEQSNEKIKKLKGKLEEYQDEKKQLQQE 1285
>gi|6960551|gb|AAF33621.1|AF169823_92 (AF169823) ORF92 [Spodoptera
exigua nucleopolyhedrovirus]
Length = 704
Score = 28.2 bits (61), Expect = 8.4
Identities = 15/49 (30%), Positives = 28/49 (56%), Gaps = 2/49 (4%)
Query: 11 MRSMSDSELVNDLTTRQAVERFTPVESELLSRLKGLLEDYEEVRDALEQ 59
+R M D +L D+ + Q ERF + L+S++ L+E ++D +E+
Sbjct: 633 VREMCDRQL--DIQSAQLQERFEDSKVNLVSKIDKLIEQVAPLQDRIER 679
>gi|548585|sp|P35875|PPOL_DROME POLY [ADP-RIBOSE] POLYMERASE (PARP)
(ADPRT) (NAD(+) ADP-RIBOSYLTRANSFERASE)
(POLY[ADP-RIBOSE] SYNTHETASE) >gi|476993|pir||A47474
NAD+ ADP-ribosyltransferase (EC 2.4.2.30) - fruit fly
(Drosophila melanogaster) >gi|303546|dbj|BAA02964|
(D13806) poly(ADP-ribose) polymerase [Drosophila
melanogaster] >gi|3044062 (AF051548) poly(ADP-ribose)
polymerase [Drosophila melanogaster]
Length = 994
Score = 28.2 bits (61), Expect = 8.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 4 PMPTEMFMRSMSDSELVNDLTTRQAVERFTPVESELLSRLKGLLEDYEEVRDALEQDG 61
P F RS+ + ND+ R + R +P L + GL ++E+R +E G
Sbjct: 353 PPNKSTFSRSLLKTNKNNDVLVRPTIPRISPPLYNLKFSIIGLKNQHKELRKRIENLG 410
>gi|540753|pir||S41186 gene 39 protein - phage SPP1
>gi|439643|emb|CAA48062| (X67865) 39 [Bacteriophage
SPP1] >gi|2764918|emb|CAA66495| (X97918) gene 39
[Bacteriophage SPP1] >gi|1090462|prf||2018369P gene 39
[Bacteriophage SPP1]
Length = 126
Score = 28.2 bits (61), Expect = 8.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 18 ELVNDLTTRQAVERFTPVESELL----SRLKGLLEDYEEVRDALEQDGDAQ 64
E++N+LT V +F P S+LL + + YEE + L++ +A+
Sbjct: 44 EIMNNLTDYAKVNKFPPTVSDLLKAQSEQRDRFIPSYEETQRILKEQAEAE 94
>gi|1090463|prf||2018369Q G40P protein [Bacteriophage SPP1]
Length = 517
Score = 28.2 bits (61), Expect = 8.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 18 ELVNDLTTRQAVERFTPVESELL----SRLKGLLEDYEEVRDALEQDGDAQ 64
E++N+LT V +F P S+LL + + YEE + L++ +A+
Sbjct: 44 EIMNNLTDYAKVNKFPPTVSDLLKAQSEQRDRFIPSYEETQRILKEQAEAE 94
Database: nr
Posted date: Feb 20, 2000 12:20 AM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.312 0.129 0.358
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16101800
Number of Sequences: 457798
Number of extensions: 442468
Number of successful extensions: 1371
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1364
Number of HSP's gapped (non-prelim): 10
length of query: 65
length of database: 140,871,481
effective HSP length: 44
effective length of query: 21
effective length of database: 120,728,369
effective search space: 2535295749
effective search space used: 2535295749
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 42 (21.9 bits)
S2: 61 (28.2 bits)