BLASTP 2.0.10 [Aug-26-1999]
Query= XF-0.5-GL2346
(54 letters)
Database: nr
457,798 sequences; 140,871,481 total letters
Graphical Overview:
Score E
Sequences producing significant alignments: (bits) Value
gi|1360801|pir||S55644 hypothetical protein 49 - equine herpesv... 29 5.1
>gi|1360801|pir||S55644 hypothetical protein 49 - equine herpesvirus
2 >gi|695222 (U20824) ORF 49 [Equine herpesvirus 2]
Length = 302
Score = 29.0 bits (63), Expect = 5.1
Identities = 16/45 (35%), Positives = 23/45 (50%), Gaps = 10/45 (22%)
Query: 5 CDLEQLRTVYSLSDLCAFHTAMVEWDALQHDALTPCDDSRRIPDP 49
C +E+ TVYSLS C+ + + D+L H R+PDP
Sbjct: 167 CFVERSGTVYSLSKFCSLASELFYEDSLWH----------RLPDP 201
Database: nr
Posted date: Feb 20, 2000 12:20 AM
Number of letters in database: 140,871,481
Number of sequences in database: 457,798
Lambda K H
0.325 0.140 0.488
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16455236
Number of Sequences: 457798
Number of extensions: 422073
Number of successful extensions: 925
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 925
Number of HSP's gapped (non-prelim): 1
length of query: 54
length of database: 140,871,481
effective HSP length: 33
effective length of query: 21
effective length of database: 125,764,147
effective search space: 2641047087
effective search space used: 2641047087
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 61 (28.2 bits)