Previous XF2535 Next



Description

Internal Name:XF-05E12-GL25
Synonym:none
Product:two-component system, sensor protein (41.6 kDa)
Gene Name:colS
Category:I.D (Regulatory functions)
Secondary Category:none
Accession:GI|1729784
EC/TC Number:In preparation
Coordinates:2408430-2409551 U (1122 bp) (373 aa)

Characteristics

Gene found by:Glimmer
RBS:Yes

Other Information

BLASTP | BLASTX | BLASTP/NOFILTER | COG | PSORT | PFAM

Annotation Notepad

All the BLASTp hits are partial matches. Strongest similarity (5e-40) to (gi|1729784|emb|CAA70932| (Y09798)) Pseudomonas fluorescens ColS which is described as a sensor kinase of an OmpR-PhoB subclass two-component system (MEDLINE 98086878). There are BLAST hits to several two-component regulatory system sensor proteins. The COGnitor analysis included the translational product of this ORF in COG0642 (13) - Sensory transduction histidine kinases. The Pfam analysis determined a Histidine kinase motif (6.9e-33) from aa 256 to 454 and a Domain found in bacterial signal proteins (0.45) from aa 171 to 242 of the translational product of this ORF


© 2000 Xylella fastidiosa Genome Project